 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F104672 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 100 |
| Average Sequence Length | 83 residues |
| Representative Sequence | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEEEVVITELDVVDDKDELLRD |
| Number of Associated Samples | 70 |
| Number of Associated Scaffolds | 100 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 61.00 % |
| % of genes near scaffold ends (potentially truncated) | 28.00 % |
| % of genes from short scaffolds (< 2000 bps) | 82.00 % |
| Associated GOLD sequencing projects | 61 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (77.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (22.000 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (42.000 % of family members) |
| ⦗Top⦘ |
| ⦗Top⦘ |
| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 16.67% β-sheet: 46.43% Coil/Unstructured: 36.90% | Feature Viewer |
|
|
|||||
| Powered by Feature Viewer | |||||
| ⦗Top⦘ |
| Pfam ID | Name | % Frequency in 100 Family Scaffolds |
|---|---|---|
| PF00072 | Response_reg | 3.00 |
| PF07452 | CHRD | 2.00 |
| PF01037 | AsnC_trans_reg | 1.00 |
| PF00382 | TFIIB | 1.00 |
| PF13561 | adh_short_C2 | 1.00 |
| PF01435 | Peptidase_M48 | 1.00 |
| PF00775 | Dioxygenase_C | 1.00 |
| PF10061 | DUF2299 | 1.00 |
| PF06348 | DUF1059 | 1.00 |
| COG ID | Name | Functional Category | % Frequency in 100 Family Scaffolds |
|---|---|---|---|
| COG3485 | Protocatechuate 3,4-dioxygenase beta subunit | Secondary metabolites biosynthesis, transport and catabolism [Q] | 1.00 |
| ⦗Top⦘ |
| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 77.00 % |
| All Organisms | root | All Organisms | 23.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 17.00% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 14.00% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 9.00% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 9.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 8.00% |
| Soil | Environmental → Terrestrial → Soil → Sand → Desert → Soil | 6.00% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 5.00% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 5.00% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 5.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 4.00% |
| Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 4.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 3.00% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 2.00% |
| Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 2.00% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 1.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.00% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 1.00% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.00% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000787 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000858 | Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil | Environmental | Open in IMG/M |
| 3300000890 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300003987 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 | Environmental | Open in IMG/M |
| 3300003999 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
| 3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
| 3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
| 3300006876 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 | Environmental | Open in IMG/M |
| 3300006894 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control | Environmental | Open in IMG/M |
| 3300006918 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 | Environmental | Open in IMG/M |
| 3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
| 3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
| 3300009146 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 | Environmental | Open in IMG/M |
| 3300009168 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 | Environmental | Open in IMG/M |
| 3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
| 3300009840 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A | Environmental | Open in IMG/M |
| 3300010038 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106 | Environmental | Open in IMG/M |
| 3300010039 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56 | Environmental | Open in IMG/M |
| 3300010040 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55 | Environmental | Open in IMG/M |
| 3300010045 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61 | Environmental | Open in IMG/M |
| 3300010166 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27 | Environmental | Open in IMG/M |
| 3300011333 | Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300014265 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2 | Environmental | Open in IMG/M |
| 3300014301 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1 | Environmental | Open in IMG/M |
| 3300014314 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2 | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300018067 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex | Environmental | Open in IMG/M |
| 3300018073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1 | Environmental | Open in IMG/M |
| 3300018432 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T | Environmental | Open in IMG/M |
| 3300018465 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS | Environmental | Open in IMG/M |
| 3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
| 3300018920 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS | Environmental | Open in IMG/M |
| 3300019767 | Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T | Environmental | Open in IMG/M |
| 3300019884 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2 | Environmental | Open in IMG/M |
| 3300020154 | Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_20 | Environmental | Open in IMG/M |
| 3300021184 | Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20 | Environmental | Open in IMG/M |
| 3300024430 | Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20 | Environmental | Open in IMG/M |
| 3300025160 | Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2 | Environmental | Open in IMG/M |
| 3300025537 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes) | Environmental | Open in IMG/M |
| 3300025582 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-two (SPAdes) | Environmental | Open in IMG/M |
| 3300025721 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-D (SPAdes) | Environmental | Open in IMG/M |
| 3300025795 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300026045 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300026535 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq) | Environmental | Open in IMG/M |
| 3300027075 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 HiSeq | Environmental | Open in IMG/M |
| 3300027395 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027650 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq | Environmental | Open in IMG/M |
| 3300027675 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027717 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027886 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes) | Environmental | Open in IMG/M |
| 3300028578 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 | Environmental | Open in IMG/M |
| 3300030006 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 | Environmental | Open in IMG/M |
| 3300031229 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 | Environmental | Open in IMG/M |
| 3300031847 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4 | Environmental | Open in IMG/M |
| 3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
| 3300031943 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2 | Environmental | Open in IMG/M |
| 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Host-Associated | Open in IMG/M |
| 3300032003 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1 | Environmental | Open in IMG/M |
| 3300032017 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4 | Environmental | Open in IMG/M |
| 3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
| 3300032211 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI11643J11755_117531632 | 3300000787 | Soil | MTIRVVEVWDAADRSESLYQRINEVLKDNNITREELXXIKYSAVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLRD* |
| JGI10213J12805_106712801 | 3300000858 | Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEVVSTD* |
| JGI11643J12802_117067461 | 3300000890 | Soil | VIEVWDAADRSESLYQRINDAIKDNNITREELIDIKYSAVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELL* |
| Ga0055471_100151943 | 3300003987 | Natural And Restored Wetlands | MTLRVIEVWDAADRSESLYQRINDTIKDNNITREDLIDIKYSTAYIPEDKKITSQALIIFDQKEDVVITELDVVDDKDELLKD* |
| Ga0055471_102527972 | 3300003987 | Natural And Restored Wetlands | IRMTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYLPDDKKITSQALIIFDKKEEEVVITELDVVDDKDELLRD* |
| Ga0055469_101474052 | 3300003999 | Natural And Restored Wetlands | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYLPDDKKITSQALIIFDKKEEEVVITELDVVDDKDELLRD* |
| Ga0063356_1014507421 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MTVRVIEVWDAADRSESLYQRINDAIKDNDITREDLIDIKYSTAYIPEDKKITSQALIIFDKQEEVVITELDVVDDKDELLKD* |
| Ga0075428_1001334884 | 3300006844 | Populus Rhizosphere | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREDLIDIKYSIVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLRD* |
| Ga0075428_1012862921 | 3300006844 | Populus Rhizosphere | MTIRVVEVWDAADRSESLYQRINEVLKDNNITREELVDIKYSTVYIPEDKKITSQALIIFDKKE |
| Ga0075421_1005505042 | 3300006845 | Populus Rhizosphere | MTIRVVEVWDAADRSESLYQRINEVLKDNNITREELVDIKYSTVYIPEDKKITSQALIIFDKKEEEVVITELDVVDDKDELLRD* |
| Ga0075430_1000444676 | 3300006846 | Populus Rhizosphere | MTIRVVEVWDAADRSESLYQRINEVLKDNNITREELVDIKYSTVYIPEDKKITSQALIIFDKKEEEVVTTELDVVDDKDELLRD* |
| Ga0075430_1010997202 | 3300006846 | Populus Rhizosphere | EVWDAADRSESLYQRINDAIKDNNINREDLTDIKYSIVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLRD* |
| Ga0075430_1013182143 | 3300006846 | Populus Rhizosphere | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREDLIDIKYSIVYIPEDKKITSQALIIFDKKEDVV |
| Ga0075420_1015539962 | 3300006853 | Populus Rhizosphere | LYRDILGKMTLRVIEVWDAADRSESLYQRINDAIKDNNITREDLIDIKYSIVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLRD* |
| Ga0079217_100705921 | 3300006876 | Agricultural Soil | MTIRVIEVWDAADRSESISQRINDVLRDNKITRQELIDIKYSTVYIPDDKKITSQALIIFDKKDNNKVQEYPAENDDSERKEVVMTELDVVEDKDELLRNK* |
| Ga0079217_100802241 | 3300006876 | Agricultural Soil | MTIRVIEVWDAPDRSESIYQRINDVIRDNNITREELIDIKYSTVYIPDDKKITSQALIIFDKKDNEEGLIT* |
| Ga0079217_100954581 | 3300006876 | Agricultural Soil | MTIRVIEVWDAADRSESLYQRINDVLKDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEEEVVITELDVVDDKDELLRD* |
| Ga0079217_101955442 | 3300006876 | Agricultural Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNKVTREELIDIKYSTVYIPDDKKITSQALIIFDKKDKEEGTVT* |
| Ga0079215_102158733 | 3300006894 | Agricultural Soil | MTIRVIEVWDAADRSESLYQRINDIIRDNKITREELIDIKYSTVYIPDDKKITSQALIIFDKNDNNQVREYSAENDDSERKEVVMTELDVVEDKDELLRNK* |
| Ga0079215_108751441 | 3300006894 | Agricultural Soil | MTIRVIEVWDAADRSESISQRINDVIRDNNITRQELIDIKYSTVYIPDDRKITSQALIIFDKKDNKVLEYPEENDDGEEKEVVMTELDIVDDKDELLRK* |
| Ga0079216_100419894 | 3300006918 | Agricultural Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNKVTREELIDIKYSTVYIPDDKKITSQALIIFDKKDNNKFQEYSTENDDSERKEVVLTELDVVEDKDELLRNK* |
| Ga0079216_104262352 | 3300006918 | Agricultural Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEEEEVVITELDVVEDKDELLRD* |
| Ga0079216_110366782 | 3300006918 | Agricultural Soil | MTIRVIEVWDAADRSESISQRINDVLRDNKITRQELIDIKYSTVYIPDDKKITSQALIIFDKKYKSLEYFRDNDVSEEKEVVMTELDVVD |
| Ga0075419_100289758 | 3300006969 | Populus Rhizosphere | MTIRVIEVWDAADRSESLYQRINEVLKDNNITREELVDIKYSTVYIPEDKKITSQALIIFDKKEEEVVITELDVVDDKDELLRD* |
| Ga0079218_105857931 | 3300007004 | Agricultural Soil | VIEVWDAADRSESLYQRINDVLRDNKITREELIDIKYSTVYIPDDKKITSQALIIFDKKDNNQVQEYSAENDDSERKEVVMTELDVVEDKNELLRNK* |
| Ga0079218_114248542 | 3300007004 | Agricultural Soil | MTIRVIEVWDAADRSESLYQRINDVLKDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEEEEVVITELDVVEDKDELLRD* |
| Ga0079218_118422062 | 3300007004 | Agricultural Soil | MTIRVIEVWDAPDRSESIYQRINDVIRDNNITREELIDIKYSTVYIPDDKKITSQALIIFDKKYNEEGLIT* |
| Ga0079218_133163951 | 3300007004 | Agricultural Soil | RVIEVWDAADRSESISQRINDVIRDNNITRQELIDIKYSTVYIPDDRKITSQALIIFDKKDNKVLEYPEENDDGEEKEVVMTELDIVDDKDELLRK* |
| Ga0105091_101602752 | 3300009146 | Freshwater Sediment | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPDDKKITSQALIIFDKKEEEVVSTKFDVEH* |
| Ga0105104_100482983 | 3300009168 | Freshwater Sediment | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREELIDIKYSAVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELIRD* |
| Ga0105104_102546802 | 3300009168 | Freshwater Sediment | MTIRAIEVWDAPDRSESLYQRINDVLRDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEVVSTELNLEHELLRD* |
| Ga0105104_104736242 | 3300009168 | Freshwater Sediment | EVWDAADRSESLYQRINDAIKDNDITREDLIDIKYSTAYIPEDKKITSQALIIFDKQEEVVITELDVVDDKDELLKD* |
| Ga0126307_100287942 | 3300009789 | Serpentine Soil | MTIRVIEVWDAADRSESISQRINDVLRDNKITREELLDIKYSTVYIPDDKKITSQALIIFDKNYNKVLEYSAENDGSLEKEVVMTELDVIDDKDELLRK* |
| Ga0126313_100056516 | 3300009840 | Serpentine Soil | MTIRVIEVWDAADRSESISQRINDVLRDNKITREELLDIKYSTVYIPDDKKITSQALIIFDKNYNKVLEYSGVNDGSMEKEVVMTELDVIDDKDELLRK* |
| Ga0126313_112975503 | 3300009840 | Serpentine Soil | MTIRVIEVWDAADRSESLYQRKRINEVIRDNKITREELIDIKYSTVYIPDDKKITSQALIIFDKKDNNQVLKYSTENDDSERKEVVITELDVVDD |
| Ga0126315_100038886 | 3300010038 | Serpentine Soil | MTIRVIEVWDAADRSESISQRINDVIRDNKITREELLDIKYSTVYIPEDKKITSQALVIFDKNYNKVLEYSGVNDGSMEKEVVMTELDVIDDKDELLRK* |
| Ga0126309_101600781 | 3300010039 | Serpentine Soil | MTVRAIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEEEVVITELDVVDDKDELLRD* |
| Ga0126308_100085658 | 3300010040 | Serpentine Soil | MTIRVIEVWDAADRSESISQRINDVIRDNKITREELLDIKYSTVYIPDDKKITSQALIIFDKNYNKVLEYSGVNDGSMEKEVVMTELDVIDDKDELLRK* |
| Ga0126311_100047998 | 3300010045 | Serpentine Soil | MTIRVIEVWDAADRSESISQRINDVLRDNKITREELLDIKYSTVYIPDDKKITSQALIIFDKNYNKVLEYSAENDGS |
| Ga0126311_103816913 | 3300010045 | Serpentine Soil | AADRSESISQRINDVIRDNKITREELLDIKYSTVYIPEDKKITSQALVIFDKNYNKVLEYSGVNDGSMEKEVVMTELDVIDDKDELLRK* |
| Ga0126306_117067331 | 3300010166 | Serpentine Soil | RVIEVWDAADRSESISQRINDVLRDNKITREELLDIKYSTVYIPDDKKITSQALIIFDKNYNKVLEYSGVNDGSLEKEVVMTELDVIDDKDELLRK* |
| Ga0127502_104121322 | 3300011333 | Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEEEVVITELDVVDDKDELLRD* |
| Ga0075314_11412252 | 3300014265 | Natural And Restored Wetlands | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTIYLPDDKKITSQALIIFDKKEEEVVITELDVVDDKDELLRD* |
| Ga0075323_11807971 | 3300014301 | Natural And Restored Wetlands | MTLRVIEVWDAADRSESLYQRINDTIKDNNITREDLIDIKYSTAYIPEDKKITSQALIIFDQKEDVVITELDVVDAKDELLKD* |
| Ga0075316_11907691 | 3300014314 | Natural And Restored Wetlands | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREELIDIKYSAVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLRD* |
| Ga0132258_101492863 | 3300015371 | Arabidopsis Rhizosphere | MTLRVIEVWDAADRSESLSQRINDAIKDNNITREDLIDIKYSIVYIPEDKEVTSQALIIFDKNDDVVITESDVFQDKDELLRNQE* |
| Ga0132258_104091433 | 3300015371 | Arabidopsis Rhizosphere | MTIGVIEVWDAADRSESLSQRINDAIKDNNISREDLIDIKYSIVYIPEDKKVTSQALIIFDNKDDIVITESDVFEYKDELLRNQE* |
| Ga0132256_1017817371 | 3300015372 | Arabidopsis Rhizosphere | MTLRVIEVWDAADRSESLSQRINDAIKDNNISREDLIDIKYSIVYIPEDKKVTSQALIIFDKNDDVVITESDVFQDKDELLRNQE* |
| Ga0132257_1026206032 | 3300015373 | Arabidopsis Rhizosphere | WDAADRSESLSQRINDAIKDNNITREDLIDIKYSIIYIPEDKKVTSQALIIFDKTEDVVITASDVVDDKDELLRG* |
| Ga0184611_10080234 | 3300018067 | Groundwater Sediment | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREELIDIKYSAVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLRD |
| Ga0184624_104305792 | 3300018073 | Groundwater Sediment | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREELVDIKYSAVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLRD |
| Ga0190275_119583672 | 3300018432 | Soil | MTIRVIEVWDAADRSESLYQRINEVLKDNNITREELVDIKYSTVYIPEDKKITSQALIIFDKKEEIVMTELDVVDDKDELLRD |
| Ga0190269_101857471 | 3300018465 | Soil | IRAIEVWDAPDRSESLYQRINDVLRDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEEVVSTKLDVEH |
| Ga0190269_103202002 | 3300018465 | Soil | MTIRVIEVWDAADRSESLYQRINDVLKDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEEEEEVVITELDVVED |
| Ga0190269_107597142 | 3300018465 | Soil | MTIRVIEVWDAADRSESLYQRINDVLKDNNITREELVDIKYSTVYIPEDKKITSQALIIFDKKEEEVVITELDVVDDKDELLRD |
| Ga0190268_100031212 | 3300018466 | Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNNINREELIDIKYSTVYIPEDKKITSQALIIFEKKEVVSTELNLEHELLRD |
| Ga0190270_106466063 | 3300018469 | Soil | MTIRVIEVWDAADRSESLYQRINDVLKDNNITREELIDIKYSTVYIPEEKKITSQALIIFDKKEEIVITELDVVDDKDELLRD |
| Ga0190270_111855361 | 3300018469 | Soil | MTLRVIEVWDAADRSESLYQRINDTIKDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEDVVITESDVVDDKDELIRD |
| Ga0190271_113687533 | 3300018481 | Soil | MTLRVIEVWDAADRSESLYQRINDTIKDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEDVVITESDVVDDIDELIRD |
| Ga0190271_124174572 | 3300018481 | Soil | MTIRVIEVWDAADRSESLYQRINDVLSDNNVTREELIDIKYSTVYIPDDKKITSQALIIFDKKEEEVVITELDVVDDKDELLRD |
| Ga0190273_106668442 | 3300018920 | Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEEIGITELDVVDDKDELLRD |
| Ga0190267_104012281 | 3300019767 | Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEGVGSTKLNVVDDKDELLRD |
| Ga0190267_110460282 | 3300019767 | Soil | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREELIDIKYSAVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLRDX |
| Ga0193741_10023452 | 3300019884 | Soil | MTIRVIEVWDAADRSESLYQRINDVLKDNNITREDLIDIKYSTVYIPEDKKITSQALIIFDKKEEEEVVITELDVVEDKDELLRD |
| Ga0193741_10405002 | 3300019884 | Soil | MTVRAIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPEEKKITSQALIIFDKKEEIVMTELDVVDDKDELLRD |
| Ga0196965_11198842 | 3300020154 | Soil | MTIRVIEVWDAVDRSESISQKINDVIRDNNITRQELIDIKYSTVYIPDDKKITSQALIIFDKKDNNVQEYPEKNDDNEEKEVVMTGLDVVDDKDELIRK |
| Ga0196959_101446871 | 3300021184 | Soil | ADRSESLYQRINEVIRDNNITRQELIDIKYSTVYIPDDKKITSQALIIFDKKDNNVQEYPEKNDDNEEKEVVITELDVVDDKDELLRK |
| Ga0196962_100117292 | 3300024430 | Soil | MTIRVIEVWDAPDRSESIYQRINDVIRDNKITREELIDIKYSTVYIPDDKKITSQALIIFDKKDNEEGLIT |
| Ga0196962_100259841 | 3300024430 | Soil | MTIRVIEVWDAADRSESIYQRINEVIRDNKITREELIDIKYSTVYIPDDKKITSQALIIFDKKNNQVLEYSG |
| Ga0196962_101584391 | 3300024430 | Soil | MTIRVIEVWDAVDRSESISQRINDVIRDNNITRQELIDIKYSTVYIPDDKKITSQALIIFDKKDNNVQEYPEKNDDNEEKEV |
| Ga0196962_101793312 | 3300024430 | Soil | MTIRVIEVWDAADRSESLYQRINEVIRDNNITRQELIDIKYSTVYIPDDKKITSQALIIFDKKDNNVQEYPEK |
| Ga0209109_103823042 | 3300025160 | Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYLPDDKKITSQALIIFDKKEVVITELDVVDDKDELLRD |
| Ga0210061_10335862 | 3300025537 | Natural And Restored Wetlands | MTLRVIEVWDAADRSESLYQRINDTIKDNNITREDLIDIKYSTAYIPEDKKITSQALIIFDQKEDVVITELDVVDDKDELLKD |
| Ga0209386_10252592 | 3300025582 | Arctic Peat Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEEVVITELDVVDDKDELLRD |
| Ga0209587_10845062 | 3300025721 | Arctic Peat Soil | MTVRAIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPEEKKITSQALIIFDKKEEIVMTELDVVNDKDELLRD |
| Ga0210114_10915422 | 3300025795 | Natural And Restored Wetlands | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYLPDDKKITSQALIIFDKKEEEVVITELDVVDDKDELLRD |
| Ga0208535_10140883 | 3300026045 | Natural And Restored Wetlands | MTIRVIEVWDAADRSESLYQRINDGLRDNNITREEPIDIKYSTVYIPDNKKITSQALIIFDKKEEQVVITELDVVDDKDELLRD |
| Ga0256867_100113403 | 3300026535 | Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPDDKKITSQALIIFDKKEEEVVITELDVVDDKDELLRD |
| Ga0214467_10295383 | 3300027075 | Soil | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREELIDIKYSAVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLR |
| Ga0209996_10362492 | 3300027395 | Arabidopsis Thaliana Rhizosphere | MTIRVVEVWDAADRSESLYQRINEVLKDNNITREDLIDIKYSIVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLRD |
| Ga0256866_11857251 | 3300027650 | Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPDDKKITSQALIIFDKKEEEVVITELDVVDDKDELEIKKXVLLLLLIIKEFG |
| Ga0209077_11185651 | 3300027675 | Freshwater Sediment | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPDDKKITSQALIIFDKKEEEVVITELDVVDDKDELLKD |
| Ga0209998_102011131 | 3300027717 | Arabidopsis Thaliana Rhizosphere | MTIRVIEVWDAADRSESLYQRINDVLKDNNITREELVDIKYSTVYIPEDKKITSQALIIFDKKEEEVVITELDVVDNKDELLRD |
| Ga0209998_102036652 | 3300027717 | Arabidopsis Thaliana Rhizosphere | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREDLIDIKYSIVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLRD |
| Ga0209974_104383581 | 3300027876 | Arabidopsis Thaliana Rhizosphere | MTIRVIEVWDAADRSESLYQRINDVLKDNNITREELIDIKYSTVYIPEDKKITSQALIIFDKKEEEVVITELAVVDNKDELLR |
| Ga0209481_106601541 | 3300027880 | Populus Rhizosphere | MTIRVVEVWDAADRSESLYQRINEVLKDNNITREELVDIKYSTVYIPEDKKITSQALIIFDKKEEEVVITEIDVVDDKDELLRD |
| Ga0209486_107759212 | 3300027886 | Agricultural Soil | MTIRVIEVWDAADRSESISQRVNDVIRDNNITRQELIDIKYSTVYIPDDKKITSQALIIFDKKDNKVLEYP |
| Ga0272482_101961532 | 3300028578 | Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPDDKKITSQALIIFDKKEEEVVITELDVIDDKDELLRD |
| Ga0299907_102237171 | 3300030006 | Soil | MTIRVIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPDDKKITSQALIIFDKKEEEVVITELDVVDDKDELEIKK |
| Ga0299913_101203211 | 3300031229 | Soil | MTIRVIEVWEAADRSESLYQRINDGLRDNNITGEELIDIKYSTVYIPDDKKITSQALITFDKKE |
| Ga0299913_107679471 | 3300031229 | Soil | MTVRAIEVWDAADRSESLYQRINDVLRDNNITREELIDIKYSTVYIPEEKKITSQALIIFDKKEEIVMTELDVVDDRDELLRD |
| Ga0310907_102272871 | 3300031847 | Soil | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREDLIDIKYSIVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELIRD |
| Ga0310900_108308752 | 3300031908 | Soil | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREDLIDIKYSIVYIPEDKKITSQALIIFDKQGDVVVTE |
| Ga0310900_110500392 | 3300031908 | Soil | EVWDAADRSESLYQRINDAIKDNNITREDLIDIKYSIVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLRD |
| Ga0310885_102485862 | 3300031943 | Soil | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREELIDIKYSAVYIPEDKKITSQALIIFDKQGDVVVTE |
| Ga0307416_1009382303 | 3300032002 | Rhizosphere | MTLRVIEVWDAADRSESLYQRINDALRDNKITREELVDIKYSTVYIPDDKKITSHALIIFDKKDNNQVRDYSLENNDSERKEVVMTELDVVEDKDELLRE |
| Ga0310897_103661423 | 3300032003 | Soil | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREDLIDIKYSAVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLRD |
| Ga0310899_102921162 | 3300032017 | Soil | MTLRVIEVWDAADRSESLYQRINDAIKDNNITREELIDIKYSAVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELIRD |
| Ga0310890_100504996 | 3300032075 | Soil | MTLRVIEVWDAADRSESLYQRINDTIKDNNITREELIDIKYSAVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELIRD |
| Ga0310896_103136921 | 3300032211 | Soil | VIEVWDAADRSESLYQRINDAIKDNNITREDLIDIKYSIVYIPEDKKITSQALIIFDKKEDVVITELDVVDDKDELLRD |
| ⦗Top⦘ |
|
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |