NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F104620

Metagenome / Metatranscriptome Family F104620

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104620
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 76 residues
Representative Sequence MDTNRILAELRAERGRIDQAISAIEAVNSTGRRRVGRPPGAARKASRRGRMSAAARRKLSRLLKQRWAQGKMKPKAKAA
Number of Associated Samples 57
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 92.47 %
% of genes near scaffold ends (potentially truncated) 48.00 %
% of genes from short scaffolds (< 2000 bps) 77.00 %
Associated GOLD sequencing projects 48
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (55.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland
(27.000 % of family members)
Environment Ontology (ENVO) Unclassified
(52.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(63.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.19%    β-sheet: 0.00%    Coil/Unstructured: 59.81%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF04012PspA_IM30 5.00
PF02627CMD 5.00
PF11412DsbC 2.00
PF07676PD40 2.00
PF13649Methyltransf_25 2.00
PF00069Pkinase 2.00
PF07238PilZ 1.00
PF10263SprT-like 1.00
PF14559TPR_19 1.00
PF01740STAS 1.00
PF08308PEGA 1.00
PF00378ECH_1 1.00
PF12146Hydrolase_4 1.00
PF15975Flot 1.00
PF12838Fer4_7 1.00
PF05649Peptidase_M13_N 1.00
PF07690MFS_1 1.00
PF11741AMIN 1.00
PF16363GDP_Man_Dehyd 1.00
PF13545HTH_Crp_2 1.00
PF00578AhpC-TSA 1.00
PF04055Radical_SAM 1.00
PF00581Rhodanese 1.00
PF01614IclR 1.00
PF00196GerE 1.00
PF05532CsbD 1.00
PF00582Usp 1.00
PF00929RNase_T 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1842Phage shock protein ATranscription [K] 10.00
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 8.00
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 5.00
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 5.00
COG1414DNA-binding transcriptional regulator, IclR familyTranscription [K] 1.00
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 1.00
COG3590Predicted metalloendopeptidasePosttranslational modification, protein turnover, chaperones [O] 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms55.00 %
UnclassifiedrootN/A45.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10024301All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3672Open in IMG/M
3300000567|JGI12270J11330_10138112All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300001356|JGI12269J14319_10044628All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2724Open in IMG/M
3300004080|Ga0062385_10089169All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1462Open in IMG/M
3300004092|Ga0062389_104265558Not Available538Open in IMG/M
3300004559|Ga0068942_1171632Not Available537Open in IMG/M
3300004635|Ga0062388_100161967All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1714Open in IMG/M
3300006864|Ga0066797_1271509All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium591Open in IMG/M
3300009520|Ga0116214_1174131Not Available805Open in IMG/M
3300009521|Ga0116222_1137655Not Available1051Open in IMG/M
3300009524|Ga0116225_1070043Not Available1655Open in IMG/M
3300009616|Ga0116111_1160842Not Available529Open in IMG/M
3300009683|Ga0116224_10137226All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1179Open in IMG/M
3300009698|Ga0116216_10729814Not Available595Open in IMG/M
3300009698|Ga0116216_10733971Not Available593Open in IMG/M
3300009698|Ga0116216_10738853All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300009824|Ga0116219_10500341All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300010343|Ga0074044_10623793All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales704Open in IMG/M
3300010343|Ga0074044_10679694Not Available672Open in IMG/M
3300010379|Ga0136449_100402661All Organisms → cellular organisms → Bacteria → Acidobacteria2428Open in IMG/M
3300010379|Ga0136449_100425023All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis2344Open in IMG/M
3300011034|Ga0138549_108330All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes574Open in IMG/M
3300012349|Ga0137387_10692760Not Available737Open in IMG/M
3300012931|Ga0153915_10000789All Organisms → cellular organisms → Bacteria29261Open in IMG/M
3300014165|Ga0181523_10381498All Organisms → cellular organisms → Bacteria → Acidobacteria787Open in IMG/M
3300017823|Ga0187818_10084433All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1370Open in IMG/M
3300017823|Ga0187818_10297002Not Available709Open in IMG/M
3300017823|Ga0187818_10356180All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium646Open in IMG/M
3300017928|Ga0187806_1092642Not Available958Open in IMG/M
3300017933|Ga0187801_10054492Not Available1459Open in IMG/M
3300017933|Ga0187801_10134615All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300017934|Ga0187803_10490216Not Available501Open in IMG/M
3300017943|Ga0187819_10104786All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1689Open in IMG/M
3300017943|Ga0187819_10113818All Organisms → cellular organisms → Bacteria1615Open in IMG/M
3300017943|Ga0187819_10189181All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300017943|Ga0187819_10638923Not Available602Open in IMG/M
3300017955|Ga0187817_10031622All Organisms → cellular organisms → Bacteria → Acidobacteria3207Open in IMG/M
3300017955|Ga0187817_10099175Not Available1832Open in IMG/M
3300017955|Ga0187817_10926678Not Available557Open in IMG/M
3300017955|Ga0187817_11128174Not Available503Open in IMG/M
3300017966|Ga0187776_10975696Not Available621Open in IMG/M
3300017970|Ga0187783_10062640All Organisms → cellular organisms → Bacteria2743Open in IMG/M
3300017972|Ga0187781_10011657All Organisms → cellular organisms → Bacteria6288Open in IMG/M
3300017972|Ga0187781_10012279All Organisms → cellular organisms → Bacteria6109Open in IMG/M
3300017972|Ga0187781_10128926All Organisms → cellular organisms → Bacteria → Acidobacteria1767Open in IMG/M
3300017972|Ga0187781_10498335Not Available874Open in IMG/M
3300017975|Ga0187782_10108153All Organisms → cellular organisms → Bacteria2049Open in IMG/M
3300017975|Ga0187782_10139381All Organisms → cellular organisms → Bacteria1800Open in IMG/M
3300017975|Ga0187782_10290722All Organisms → cellular organisms → Bacteria1232Open in IMG/M
3300017995|Ga0187816_10549559Not Available520Open in IMG/M
3300018001|Ga0187815_10377779Not Available602Open in IMG/M
3300018006|Ga0187804_10379363Not Available624Open in IMG/M
3300018006|Ga0187804_10557836Not Available518Open in IMG/M
3300018006|Ga0187804_10589597Not Available505Open in IMG/M
3300018012|Ga0187810_10361387Not Available606Open in IMG/M
3300018032|Ga0187788_10104622All Organisms → cellular organisms → Bacteria1026Open in IMG/M
3300018062|Ga0187784_10582374All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300018062|Ga0187784_10689642All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria818Open in IMG/M
3300018062|Ga0187784_10820695Not Available742Open in IMG/M
3300018085|Ga0187772_10137188All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin3451608Open in IMG/M
3300018085|Ga0187772_10591080All Organisms → cellular organisms → Bacteria → Acidobacteria789Open in IMG/M
3300018086|Ga0187769_10475118All Organisms → cellular organisms → Bacteria → Acidobacteria943Open in IMG/M
3300018086|Ga0187769_10800579Not Available712Open in IMG/M
3300018086|Ga0187769_10801537Not Available712Open in IMG/M
3300018086|Ga0187769_10845727All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria692Open in IMG/M
3300018088|Ga0187771_10178701All Organisms → cellular organisms → Bacteria → Acidobacteria1755Open in IMG/M
3300018088|Ga0187771_10232789All Organisms → cellular organisms → Bacteria1534Open in IMG/M
3300018088|Ga0187771_10659248All Organisms → cellular organisms → Bacteria → Acidobacteria888Open in IMG/M
3300018088|Ga0187771_10946289Not Available731Open in IMG/M
3300018088|Ga0187771_11338882Not Available607Open in IMG/M
3300018090|Ga0187770_10650594Not Available840Open in IMG/M
3300018090|Ga0187770_10678077All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria822Open in IMG/M
3300027497|Ga0208199_1092049Not Available629Open in IMG/M
3300027570|Ga0208043_1130148Not Available665Open in IMG/M
3300027604|Ga0208324_1167108All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8594Open in IMG/M
3300027641|Ga0208827_1188005Not Available555Open in IMG/M
3300027696|Ga0208696_1011977All Organisms → cellular organisms → Bacteria → Acidobacteria3485Open in IMG/M
3300027783|Ga0209448_10014792All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2533Open in IMG/M
3300027783|Ga0209448_10066644Not Available1210Open in IMG/M
3300027854|Ga0209517_10024086All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5435Open in IMG/M
3300027854|Ga0209517_10437733All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium726Open in IMG/M
3300027905|Ga0209415_10233599All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1681Open in IMG/M
3300027905|Ga0209415_10288921All Organisms → cellular organisms → Bacteria → Acidobacteria1428Open in IMG/M
3300030659|Ga0316363_10295592All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300032160|Ga0311301_10885310All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1206Open in IMG/M
3300032160|Ga0311301_12847430Not Available526Open in IMG/M
3300032783|Ga0335079_10029773All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6262Open in IMG/M
3300032783|Ga0335079_11503247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium665Open in IMG/M
3300032783|Ga0335079_11725574All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300032783|Ga0335079_11846636Not Available586Open in IMG/M
3300032892|Ga0335081_10003205All Organisms → cellular organisms → Bacteria → Acidobacteria25702Open in IMG/M
3300032892|Ga0335081_10157493All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3233Open in IMG/M
3300033158|Ga0335077_11283402All Organisms → cellular organisms → Bacteria → PVC group712Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil27.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland27.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment26.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil7.00%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil5.00%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil2.00%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.00%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004559Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300006864Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193EnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009616Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100EnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011034Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 30 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300027497Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027570Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027604Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027641Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027696Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1002430123300000567Peatlands SoilMDTNRILAELRAERGRLDQAILAIEAVNSTGRRKVGRPPGAARKASRRGRMSAAARRKLSRLLKQRWAQGKMKPKAA*
JGI12270J11330_1013811223300000567Peatlands SoilMDTHRILAELRAERGRIDQAISAIEAVNSAGGRRVGRPPGTARKPGGRGGMSAAARRKLSRLLKQRWAQGK
JGI12269J14319_1004462823300001356Peatlands SoilMDTNRILAELRAERGRIDDAISALEAVNSTGRRRVGRPPGAARKVSRRGRMSPAARRKLSRLLKQRWAQGKMKPKAKAA*
Ga0062385_1008916913300004080Bog Forest SoilMDTNRILAELRAERDRIDQAISAIEAVNSPGGPRVGRPPGTARKPRRRGGMSAAARRKLSRLLKQRWAQGKMKRAK
Ga0062389_10426555813300004092Bog Forest SoilMDTGRILAELRTERDRIDQAISAIEAVNSTGRRRVGRPPKAARKVGRRGRMSAAARRKLSRLLKQRWAQGKMKPAKA
Ga0068942_117163223300004559Peatlands SoilMDTNRILAELRAERGRLDQAILALEAVNSTGRRRVGRPPGAARKASRRGRMSPAARRKLSRLLKQRWAQGKMKPKAKAA*
Ga0062388_10016196733300004635Bog Forest SoilMDTNRILAELRAERGRIDQAISAIEAVNSTGRRRVGRPPGAARKASRRGRMSAAARRKLSRLLKQRWAQGKMKPKAKAA*
Ga0066797_127150913300006864SoilRILAELRAERDRIDRAIAAMEGLNSTGRRTVTRAGKATAGRNKRGRMSAAARRKLSRLLKQRWAQGKMKPRATAA*
Ga0116214_117413113300009520Peatlands SoilMNINRILGELKAERDRIDQAISALQAVSSTEPRRLGRPPRAAAIPRRRGRMSAAARRKLSRLLKQRWAAWRR
Ga0116222_113765533300009521Peatlands SoilMETNRILAEHRAERDRIDQAISALEAVNSTGRRRVGRPPKAAAIPRGRGRMSAAARRKMSRLMKQRWAQGKMKPRAKRG*
Ga0116225_107004323300009524Peatlands SoilMDTNRILAELRAERDRLDQAISALEAVNSTGRRSVGRPPRGAATRSRRGRMSAAARRKLSRLLKQRWAQGKMKPRAEVR*
Ga0116111_116084213300009616PeatlandLAELRAERGRLDQAISALEAVSPAGGRRVGRPPGKSRKRGGMGAAARKKLSRLLKQRWAQGKMKPKAKAA*
Ga0116224_1013722613300009683Peatlands SoilMSAAEGAIMNIHRILAELRAERSRIDEAIAAITALDSTSHGRGRPPRAAAIPRRRGRMSAAARRKLS
Ga0116216_1072981413300009698Peatlands SoilMDTNRILAELRAERDRIDQAISAIEAVNSTGGRRVGRPPGTAQKPRRRGGMSAAARRKLSRLLKQRWAQGKMKRGKVSRPARRMS
Ga0116216_1073397113300009698Peatlands SoilRGRIDDAISALEAVNSTGRRRVGRPPGAARKVSRRGRMSAAARRKLSRLLKQRWAQGKMKPKAA*
Ga0116216_1073885313300009698Peatlands SoilMETNRILAELRAEPNRVERAISALKAVNSTGHPRVGRPPRAAAIPRRRGRMSAAARRKMSRLMTQRWAQGKMKQAKASKPVRRMSRAA
Ga0116219_1050034123300009824Peatlands SoilMDTHRILAELRAERGRIDQAISAIEAVNSAGGRRVGRPPGTARKPGGRGGMSAAARRKLSRLLKQRWAQGKMKRAKA
Ga0074044_1062379323300010343Bog Forest SoilMDTNKILAELRAERGRLDQAISAIEAVGSTGGRRVGRPPGTAQKRRKRGGMGAAARKKLSRLLKQRWAEGKMKRGKASKPPRRM
Ga0074044_1067969423300010343Bog Forest SoilMEINRIVAELRAERDRIARAIAAIEGLNSTVTRRVGRPPRAAATPRRRGRMSAAARRKLSRLLKQSAVLFLEFKELTAA*
Ga0136449_10040266133300010379Peatlands SoilMETNRILAELRAERDRIDRAISAIEGLNSTGRRRVGRPPKTAEKPSRRGRMSAAARRKLSRLLKQRWAQGKMR*
Ga0136449_10042502313300010379Peatlands SoilMDTNRILAELRAERDRIDQAISAIEAVNSPGGRRVGRPPGTARKPRRRGGMSAAARRKLSRLLKQRWAQGKMK
Ga0138549_10833023300011034Peatlands SoilMDTNRILAELRAERGRLDQAILALEAVNSTGRRRVGRPPGAARKASRRGRMSPAARRKLSRLLKQRW
Ga0137387_1069276023300012349Vadose Zone SoilMRDAKGDYMNISTILGELQAERDRLDRAITAIEAINSTGRRRVGGPPRAAATERTRGRMSAAARRKLSRLLKQRWAQGKMK
Ga0153915_10000789123300012931Freshwater WetlandsMDTNRILAELRAERDRIDRAIAAIEAVNSTGRRRVGHPPKAARKVRSRGRMSAAARRKLSRLLKQRWAQGKMKPKAKAA*
Ga0181523_1038149823300014165BogMDTNRILAELRAERDRLDQAISALEAVNSTGRRSVGRPPRGAATRSRRGRMSAAARRKLSRLLKQRWAQGKMKARA*
Ga0187818_1008443323300017823Freshwater SedimentMDTDRILAELRAERGRLDQAILALEAVNSTGRRRVGRPPGAARKASRRGRMSAAARRKLSRLLKQRWAQGKMKPKAKAA
Ga0187818_1029700213300017823Freshwater SedimentMNTNRILTELRSERDRIDRAIAAIEGLNSTGKRKAGRPPKSAQQPGRRGRMSAAARRKMSRLMKQRWAQGKMKPRAKAR
Ga0187818_1035618013300017823Freshwater SedimentMDINRILDELKAERDRIDRAISAIEGLNSTGRRRVGRPPRAAEKPRRRGRMSAAAWRKLSRLLKQRWAQGSTSAPVRFGTGYALSQN
Ga0187818_1052857013300017823Freshwater SedimentMDTNRILAELVAERAHIDRAIAAIVGLSSTGRRRGRPPGSTIAPKKRGRRRISAAARRKLSRLLKQRWAQGKMKPKTA
Ga0187806_109264223300017928Freshwater SedimentMDTDRILAELRAERGRLDQAILALEAVNSTGRRRVGRPPGAARKASRRGRMSAAARRKLSRLLKQRWAQGKIKPKAKAA
Ga0187814_1036482313300017932Freshwater SedimentVNLQQVVAELRVERSRIDQAIAAIESLNSTGGRRGRPAGVISTPKRRRRRLSAAARRKLSRLLKQRWAQGKMKLGAKARP
Ga0187801_1005449223300017933Freshwater SedimentMDTHRIVAELRAERDRIDQAISAIEAVNSTGGRRVGRPPGAVRKARGRGRMSAAARRKLSRLLKQRWAQGKMKRTKV
Ga0187801_1013461513300017933Freshwater SedimentMDTNRILAELRAERDRIDQAISAIEAVNSTGHRRVGRPPRSAQKPRRRGGMSAAARRKLSRLLKQRWAQGKMK
Ga0187803_1049021613300017934Freshwater SedimentMDTNRILAELRVERDRIDQAISALAAVNSTGRPRIGRPPKAAQQPRRRGRMSAAARRKLSRLLKQRWAQGKMKPAKA
Ga0187808_1014889413300017942Freshwater SedimentVNLQQVVAELRVERSRIDQAIAAIESLNSTGGRRGRPAGVISTPKRRRRRLSAAARRKLSQLLKQRWAQGKMKPGAKAR
Ga0187819_1010478633300017943Freshwater SedimentMDTNRILAELRAERDRIDQAISAIEAVNATGRQRVGRPPRAAAIPRKRGRMSAAARRKMSRLMKQRWVQGKMKPGRKKA
Ga0187819_1011381823300017943Freshwater SedimentMNIDRILAELRAERHRIDQAISALQAVNSTEPRRVGRPLRAAAIPRKRGRMSAAARRKMSRLLKQRWAQGKMKPRAKAR
Ga0187819_1018918123300017943Freshwater SedimentMDTDRILAELRMERDRIDQAISALEAVNSTGRRRVGRPPGAARKVRRHGGMSAAARRKMSRLLKQRWAQGKMKPGVKR
Ga0187819_1062393413300017943Freshwater SedimentMANFKRILKQLRSERDQVRQELQKLDEAIRAIDATNSIGRRRVGRPPGAAPISRRRRRMSAAARRKLSRLLTQRWAQGKMKPRAKAA
Ga0187819_1063892323300017943Freshwater SedimentMDINRILAELRAERDRIDQAISAIEAVDSTGHPRVGRPPKAARKPRGRGRMSAAARRKMSRLMKQRWAQGK
Ga0187817_1003162213300017955Freshwater SedimentVNIEQIVAELKTERDRLDRAISAIEGLNATGRRRVGRPPKAAAIPRRRGMSAAARRKLSRLLKQRWAQGKMKPA
Ga0187817_1009917513300017955Freshwater SedimentMDINSILAELRAERDRIDQAISAIEAVSSTGRHRVGRPPKAARKARRRGGMSAAARRKLSRLLKQRWAQ
Ga0187817_1092667813300017955Freshwater SedimentMDIKKIVTDLKLERDRIDQVIAVITSLNSTGHRRVGRPPKAAQQPRRQGRMSAAARRKLSRLLK
Ga0187817_1105995113300017955Freshwater SedimentLYSELGEKSNMANFKRILTQLRSERDQVRQELQKLDEAIRAIDATNSIGRRRVGRPPGAAPISRRRGRMSAAARRKLSRLLKQRWAQGKMKPRAKAA
Ga0187817_1112817413300017955Freshwater SedimentMDINTILEELHAERDRIDQAISAIEAVSSTGRPRVGRQPKATRKARRSGGMSAAARRKMSRLMKQRWAQG
Ga0187776_1097569623300017966Tropical PeatlandMDTKRILAELRANRDKIDAAISAIEGLNLKGRPSVGRAPKAAATRRRRGRMSASARRKLSRLLKQRWAQ
Ga0187783_1006264053300017970Tropical PeatlandMMDTKRILVELRTERDRIDKAILALEAFNSVGHRKAGPALRTSGRKRGRMSAAARRKLSRLLKQRWAQGKMRPKAA
Ga0187781_10011657113300017972Tropical PeatlandMDTKRILVELRTERDRIDKAILALEAFNSVGHRKAGPALRTSGRKRGRMSAAARRKLSRLLKQRWAQGKMRPRAA
Ga0187781_1001227963300017972Tropical PeatlandMNIQGILVELRVERDRIEKAIQALETFNSAGRRKAGPALRTTGRKRGRMSAAARRKLSRLLKQRWAQGKMRPKAA
Ga0187781_1012892623300017972Tropical PeatlandMDTNRILAELRAERGRIDQAIRAIEAVNGAGRRTAGQPPRATRKARRRGRMSAAARQKLSRLLKQRWAQGKMKPKAKAK
Ga0187781_1049833523300017972Tropical PeatlandMDTNRILAELRAERGRIDQAIRAIEAVNGAGRKAVGRPPRVKVKARRRGRMSAAARQKLSRLLKQRWAQGKMKPKAKAK
Ga0187782_1010815313300017975Tropical PeatlandMDTKRILVELSAERDRIEKAILALEAFNSVGRSKAGPALRTTGRKRGRMSAAARRKLSRLLKQRWAQGKMRPKAA
Ga0187782_1013938113300017975Tropical PeatlandMDTKRILVELRTERDRIDKAILALEAFNSVGHRKAGPALRTSGRKRGRMSAAARRKLSRLLKQRWAQGKMR
Ga0187782_1029072223300017975Tropical PeatlandMDTKRILAELRTERDRLDKAILALEAFNSTGRRKAGPAPRATSSRRGRMSAAARRKLSRLLKQRWAQGKMKPKAA
Ga0187816_1054955923300017995Freshwater SedimentMDTHRIVAELRAERDRIDQAISAIEAVNSTGGRRVGRPPGAVRKARGRGRMSAAARRKLSRLLKQRWAQGKMR
Ga0187767_1021508513300017999Tropical PeatlandVNLQQVIAKLRVERARIDQAIAAIESLNSTGGRRGRPAGVISAPKRRRRRLSAAARRKLSRLLKQRWAQGKMKPGAKA
Ga0187815_1037777913300018001Freshwater SedimentMDTKKILAELHAERDKLDTAISALEAVSSTAGRGPGRPPSTAVAGSRKGRLSPAARRKLSRLLKQR
Ga0187804_1037936313300018006Freshwater SedimentMNTNRLLTELRSERDRIDRAIAAIEGLNSTGKRKAGRPPKSAQQPGRRGRMSAAARRKMSRLMKQRWAQGKMKPRAKAR
Ga0187804_1055783613300018006Freshwater SedimentMDTKTILAELRSERERIDRAITAIEGLNSTGQRKVGRRPKTVASRRRRSRMSPAARRKLSRLLKQ
Ga0187804_1058959713300018006Freshwater SedimentMDTNRILAELRTERDRMDRAISALEAVNSTEPRRVGRPPSAAAIPRRRGRMSAAARRKMSRMMKQ
Ga0187810_1036138713300018012Freshwater SedimentMDTNSILAELRAERDRIDQAISALENLNSTGHPRVGRPPRAAATPRRRGGMSAAARRKLSRLLRQRWAQGKMKRAK
Ga0187788_1010462213300018032Tropical PeatlandMDTYRILRELRAERDRIERAIAAIEGWDSTGRAGCPPRAAAIRRRRGRMSAAARRKLSRLLKQGWAQGKIR
Ga0187784_1058237413300018062Tropical PeatlandMNVNSILKELRAERDRIDRAIVTIEGLNSTGRRKQGRPPRTAATSRRRGRMSVAARKRLSQLLKQRWAQ
Ga0187784_1068964223300018062Tropical PeatlandMDTNRILAELRAERGRIDQAIRAIEAVNGAGRRTVGRPPRATRKARRGRMSAAARQKLSRLLKQRWAQGK
Ga0187784_1082069513300018062Tropical PeatlandMNITKILSELKSQRTRIDQAISSLEAINSTGRRKVGRPPRAAAARRRRGRMSAAARRK
Ga0187772_1013718823300018085Tropical PeatlandMDTNRILAELRAERGRIDQAIRAIEAVNGAGRKAVGRPVRATGKARRRGRMSAAARQKLSRLLKQRWAQGKMKPKAKAK
Ga0187772_1059108023300018085Tropical PeatlandMDTNRILAELRAERGRIDQAIRAIEAVNGAGRKAVVRAPRAAQKARRRGRMSAAARQKLSRLLKQRWAQGKMKPKAKAK
Ga0187769_1047511823300018086Tropical PeatlandMDTNSILAELRAERDRIDRAIAAIEGLNSTGKRKAGRPPRAAASRGRSGRLSAAARRKMSLLMKQRWAQGKMKPRAKRA
Ga0187769_1080057923300018086Tropical PeatlandMDIHGILTELRSERARIDQAISALEAVNSTERRTGGRMPRAAAAQRRRAGMSAAARRKLSRLLKQRWAAGKMKPRTKAEPARA
Ga0187769_1080153723300018086Tropical PeatlandMDIHGILTELRSERARIDQAISALEAVNSTERQTGGRMPRAAAAQRRRAGMSAAARRKLSRLLKQRWAAGKMKPRTKAEPAR
Ga0187769_1084572723300018086Tropical PeatlandMDTNKILAELRAERGRIDQAIRAIEAVNGAGRKAVGRPVRATGKTRRRGRMSAAARQKLSRLLKQRWAQGKMKPKAKAK
Ga0187771_1017870113300018088Tropical PeatlandMNINSILGELRAERDRIERAIAAIEGLNSTGRRGAGRPPSAIATRKRRGRMSAAARRKLSQLLKQRWAQGKMKRRVKAA
Ga0187771_1023278923300018088Tropical PeatlandMDTNRIIADLRAERERLDQAISALEAVSSPGRRRAGRPPGAARKARRRGGMSAAARRKLSRLLKQRWAQGKMKPKAA
Ga0187771_1065924813300018088Tropical PeatlandMDTNRMLAELRTERDRIDRAISALESINSTGQRRAVRSPRPAAATQRRPGRMSAAARRKLSRLLKQRWAAGKMKPKKKAA
Ga0187771_1094628913300018088Tropical PeatlandMDTNRILADLRAERDRIDQAISALEAVNSTGQRRAVRPLRRATIRSGRGRMSAAARRKLSRLLKQR
Ga0187771_1133888213300018088Tropical PeatlandRKRRNFLMNTARILGELRGERDRIERAIAAIEGLNSTGRRRTGRPARATGTPQRRGRMSVAARKKLSRLLKQRWAQGKMRPKAKVR
Ga0187770_1065059423300018090Tropical PeatlandMNTNSILAQLREERGRIDKAITAIEGLNSTGRRRHLGGVTQKRRGVMSVAARRKLSRLLKQRWAQGKMKPGAKATRRLSLAGRRKIAAAQRAR
Ga0187770_1067807713300018090Tropical PeatlandMDTNKILAELRAERGRIDQAIRAIEAVNGAGRRTAGQPPRATRKARRRGRMSAAARQKLSRLLKQRWAQGKMKPKAKAK
Ga0208199_109204913300027497Peatlands SoilMDTNRILAELRAERGRLDQAILAIEAVNSTGRRKVGRPPGAARKASRRGRMSAAARRKLSRLLKQRWAQGKM
Ga0208043_113014823300027570Peatlands SoilMETNRILAEHRAERDRIDQAISALEAVNSTGRRRVGRPPKAAAIPRGRGRMSAAARRKMSRLMKQRWAQGKMKPRAKRG
Ga0208324_116710823300027604Peatlands SoilMDTHRILAELRAERDRIDQAISAIEAVNSPGGRRVGRPPGTARKPRRRGGMSAAARRKLSRLLKQRWAQGKMK
Ga0208827_118800513300027641Peatlands SoilMDTNRILAELRAGRDRIDQAISAIEAVNSTGPRRVGRPPGAARKASRRGRMSAAARRKLSRLLKQRWAQGKMKPKAA
Ga0208696_101197713300027696Peatlands SoilMDTNRILAELRAERGRLDQAILAIEAVNSTGRRKVGRPPGAARKASRRGRMSAAARRKLSRLLKQRWAQGKMKPKAA
Ga0209448_1001479213300027783Bog Forest SoilMDTNGILAELRAERGRIDQAISAIEAVNSTGRRRVGRPPGAARKASRRGRMSAAARRKLSRLLKQRWAQGKMKPKAKAA
Ga0209448_1006664413300027783Bog Forest SoilMDTSMIIAELRAERDRIDRAISAIEGLNSTGYRRAGRPPRAAEKPRRRGRMSAAARRKMSRLLK
Ga0209517_1002408633300027854Peatlands SoilMDTNRILAELRAERGRINQAISALEAVSSTGRGRVGRPPGAARKASRRGRMSPAARRKLSRLLKQRWAQGKMKPKAKAA
Ga0209517_1043773313300027854Peatlands SoilMDTNRILAELRSERDRLDRAISALEAVNSTGRPRVGRPPKAAGIPRRRGRMSAAARRKLSRLLKQRWAQGKM
Ga0209415_1023359913300027905Peatlands SoilMDTNRILAELRSERDRLDRAISALEAVNSTGRPRVGRPPKAAGIPRRRGRMSAAARRKLSRLLKQRWAQGKMKRAKASK
Ga0209415_1028892133300027905Peatlands SoilMETNRILAELRAERDRIDRAISAIEGLNSTGRRRVGRPPKTAEKPSRRGRMSAAARRKLSRLLKQRWAQGKMR
Ga0316363_1029559223300030659Peatlands SoilMDTHRILAELRAERGRIDQAISAIEAVNSAGGRRVGRPPGTARKPGGRGGMSAAARRKLSRLLKQRWAQ
Ga0311301_1088531033300032160Peatlands SoilMDTNRILAELRAERDRLDQAISALEAVNSTGRRSVGRPPRGAATRSRRGRMSAAARRKLSRLLKQRWAQGKMKARA
Ga0311301_1284743023300032160Peatlands SoilMDTNRILAELRAERGRIDDAISALEAVNSTGRRRVGRPPGAARKVSRRGRMSAAARRKLSRLLKQRWAQGKMKPKAKAA
Ga0306920_10330784123300032261SoilMNFTTILAELRTERIRIDHAINVIESLNNPDGFRKGRVISRPSVPKRRGRHLSAAARAKLSRLMKQRWAQGKMKKKAA
Ga0335079_1002977323300032783SoilMDTNKILAELRAERGRIDQAIMAIEAVNGGGRPKAGRPPGAARKARRRGRMSAAARRKLSRLLKQRWAQGKMKPKTKGA
Ga0335079_1150324723300032783SoilPVTMPPRGALMDTKTILAELRAERDRIDQAITAIQSLNSSTGQHKVGRQPKAAAGRRRRSRMSATARRKLSRLLKQRWAQGKMKPGAKAA
Ga0335079_1172557423300032783SoilMDTNRILAELRAERDRIDTAISALAAVNSTGRPRVGRPPGATRKARRRGGMSAAARRKLSRLLKQRW
Ga0335079_1184663613300032783SoilMDTNRILAELRTERERIERAIAAIEGLNSTGYQRAGRPPRAGATQKGRRHLSAAARKKLSRL
Ga0335081_10003205113300032892SoilMDTKTILAELRAERDRIDQAITAIQSLNSSTGQHKVGRQPKAAAGRRRRSRMSATARRKLSRLLKQRWAQGKMKPGAKAA
Ga0335081_1015749313300032892SoilMIPIGFLRNFVRQRHSIDQAISALEAINSTEPRRAGRPPRAATIPRKRGRMSAAARRKMSRLLKQRWAQGKMKRKA
Ga0335077_1128340213300033158SoilMDTKTILAELRAERDRIDQAITAIQSLNSSTGQHKVGRQPKAAAGRRRRSRMSATARRKLSRLLK


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