NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F104584

Metagenome Family F104584

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104584
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 147 residues
Representative Sequence MLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL
Number of Associated Samples 85
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 68
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(12.000 % of family members)
Environment Ontology (ENVO) Unclassified
(61.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(77.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204.206.208.210.212.214.
1KansclcFeb2_08476920
2JGI10216J12902_1028207912
3JGI10216J12902_1097422621
4Ga0070676_100896501
5Ga0070690_1000955832
6Ga0070670_1014785571
7Ga0068868_1005805982
8Ga0070689_1002396241
9Ga0070669_1001559042
10Ga0070669_1002413072
11Ga0070675_1002131993
12Ga0070671_1000394762
13Ga0070674_1006630462
14Ga0070667_1012413211
15Ga0070667_1022437991
16Ga0070678_1001863611
17Ga0070678_1002874131
18Ga0070706_1010613171
19Ga0070698_1009949541
20Ga0070672_1001976843
21Ga0070686_1011260781
22Ga0070664_1002736112
23Ga0068856_1018716821
24Ga0068859_1000836543
25Ga0068864_1014246921
26Ga0068864_1016842431
27Ga0068866_100507313
28Ga0068861_1004943593
29Ga0068861_1019587471
30Ga0068870_101297951
31Ga0068860_1003526093
32Ga0079215_100494631
33Ga0079216_118499101
34Ga0079218_106774211
35Ga0111539_125500331
36Ga0105245_100732032
37Ga0075418_101826252
38Ga0114129_105837682
39Ga0105243_100149454
40Ga0075423_124745451
41Ga0105242_104896402
42Ga0105248_102554013
43Ga0105340_10190842
44Ga0134123_113843791
45Ga0105246_109584541
46Ga0105246_125938492
47Ga0137325_10440101
48Ga0137427_102795322
49Ga0157290_102981921
50Ga0157375_107287432
51Ga0157380_120577261
52Ga0157377_105684071
53Ga0157377_108047882
54Ga0157376_129444541
55Ga0132256_1005879522
56Ga0132257_1014878881
57Ga0132257_1041545381
58Ga0163161_111796391
59Ga0190266_100319463
60Ga0190270_123282801
61Ga0190274_102443062
62Ga0190274_108161002
63Ga0190274_109021272
64Ga0190271_103122151
65Ga0190264_109072191
66Ga0207682_100424481
67Ga0207682_105232581
68Ga0207645_101588991
69Ga0207643_100497883
70Ga0207684_105168401
71Ga0207662_100851223
72Ga0207681_105886362
73Ga0207659_103577691
74Ga0207701_101770172
75Ga0207644_100537815
76Ga0207670_105285431
77Ga0207669_109874492
78Ga0207691_100294711
79Ga0207679_102605992
80Ga0207651_103090863
81Ga0207658_103252631
82Ga0207677_102479651
83Ga0207703_100141904
84Ga0207702_124901842
85Ga0207675_1027491531
86Ga0207683_104191852
87Ga0209486_101789561
88Ga0268264_103875433
89Ga0268264_117415801
90Ga0307506_100475222
91Ga0310900_102600512
92Ga0310900_106939392
93Ga0310884_107946111
94Ga0310890_104706882
95Ga0315910_105739502
96Ga0315910_108370882
97Ga0315912_111470982
98Ga0310889_101962822
99Ga0364927_0008238_1667_2158
100Ga0364935_0029657_712_1203
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 9.55%    β-sheet: 28.09%    Coil/Unstructured: 62.36%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

20406080100120140MLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRLSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy


Visualization
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Soil
Terrestrial Soil
Agricultural Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Sediment
Arabidopsis Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
3.0%12.0%4.0%3.0%5.0%3.0%5.0%10.0%5.0%3.0%4.0%5.0%4.0%10.0%10.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_084769202124908045SoilMPFRSALLSIAASAAVPVAVAAVQLPGPIPREKEPPSQQTRMQEKRLALTVYGCVRGKRLVLSSQSARNGIIDLLNANDLQLEGPKELLTQLRREHENHDDEFTGIAIVPPSPDGSSTSEGQTKELGKKARITLGVRESSGPTGNVRRTVRFRVEAVRHLSDACAAF
JGI10216J12902_10282079123300000956SoilCVRGKRLVLSSMSSRENIIDLLNANELLLEGPKELLTQLRREHENHDDEFTGIAIVPPSPDGSSTSEGQTKELGKKTKVTHGVRESSGPTGNVRRTVRFRVEAIRHLHDACTAF*
JGI10216J12902_10974226213300000956SoilMTGLLIVLPLALATQIPGPVPREKEPPSQQTRMQEKRLPLTVYGCVRGKRLVLSSMSAREGVIDLLNANELLLEGPKELLTQIRREHENHDDELSGIAIVPPSPDGSSTNEGQTKELGKKARITMGVRESSGPIGNVRRPIRFKVEAVRHLHDACAVF*
Ga0070676_1008965013300005328Miscanthus RhizosphereMTLRSVSLSCAACAMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEACSRF*
Ga0070690_10009558323300005330Switchgrass RhizosphereMTLRSVSLSCAACAMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL*
Ga0070670_10147855713300005331Switchgrass RhizosphereMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESAGLQGDVRQPVRFKVTG
Ga0068868_10058059823300005338Miscanthus RhizosphereMTLRSVSLSCAACAMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESDGLQGDVRQPVRFKVTGLRHLHEACSRF*
Ga0070689_10023962413300005340Switchgrass RhizosphereMTLRSVSLSCAACAMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGVAILPPSPDGSTTTDVQTKDLGKKGRITVGVRESNGPQGEVRQTVRFRVASLQHMHEGCSR*
Ga0070669_10015590423300005353Switchgrass RhizosphereMTLRSVSLSCAACAMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQHLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL*
Ga0070669_10024130723300005353Switchgrass RhizosphereMTLRSASLSCAACVMLPIALSAAQLPGPVPREKEPPSQATRMREKHLALTVQGCIRGRRLLLSSLSPGDGIAEILNTDELLLDGSKDLMAQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTIGVRESNGLQGDVRQPVRFRVTGLRHVHEGCTRL*
Ga0070675_10021319933300005354Miscanthus RhizosphereMALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL*
Ga0070671_10003947623300005355Switchgrass RhizosphereMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESDGLQGDVRQPVRFKVTGLRHLHEACSRF*
Ga0070674_10066304623300005356Miscanthus RhizosphereQGCIRGKRLLLSLSPGDGIADLLNADELVLEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTLGVRESNGLQGDVRQPVRFRVTGLRHLHEACTRL*
Ga0070667_10124132113300005367Switchgrass RhizosphereMTLRSVSLSCAACAMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGV
Ga0070667_10224379913300005367Switchgrass RhizosphereTMILRSASLTCTVCALLPIALGAAQLPGPIPREKEPPSQTTRMREKQLPLTVSGCIRGKRLQLSSVFRGDGVADLLNTDQLLLEGPKDLMAQLRKEHEGHDDELTGVAILPPSPDGSTTTDVQTKDLGKKGRITVGVRESNGPQGEVRQTVRFRVASLQHMHEGCSR*
Ga0070678_10018636113300005456Miscanthus RhizosphereSVSLSCAACAMLPLALAAAQLPGPVPREKAPPSQTTRMQEKHLPLTVQGCIRGKRLLLSLSPGDGIADLLNADELVLEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTLGVRESNGLQGDVRQPVRFRVTGLRHLHEACTRL*
Ga0070678_10028741313300005456Miscanthus RhizosphereMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESDGLQGDVRQPVRFKVTGVRHLHEACSRF*
Ga0070706_10106131713300005467Corn, Switchgrass And Miscanthus RhizosphereLSAAQLPGPVPREKEPPSQATRMREKHLALTVQGCIRGRRLLLSSLSPGDGIAEILNTDELLLEGSKDLMAQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTIGVRESNGLQGDVRQPVRFRVTGLRHVHEGCTRL*
Ga0070698_10099495413300005471Corn, Switchgrass And Miscanthus RhizosphereALTVQGCIRGRRLLLSSLSPGDGIAEILNTDELLLEGSKDLMAQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRLTVGVRESNGLQGDVRQPVRFRVTGLRHVHEGCTRL
Ga0070672_10019768433300005543Miscanthus RhizosphereGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESDGLQGDVRQPVRFKVTGLRHLHEACSRF*
Ga0070686_10112607813300005544Switchgrass RhizosphereLRSASLTCTVCALLPIALGAAQLPGPIPREKEPPSQTTRMREKQLPLTVSGCIRGKRLQLSSVFRGDGVADLLNTDQLLLEGPKDLMAQLRKEHEGHDDELTGVAILPPSPDGSTTTDVQTKDLGKKGRITVGVRESNGPQGEVRQTVRFRVASLQHMHEGCSR*
Ga0070664_10027361123300005564Corn RhizosphereMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESAGLQGDVRQPVRFKVTGLRHLHEACSRF*
Ga0068856_10187168213300005614Corn RhizosphereTTRMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL*
Ga0068859_10008365433300005617Switchgrass RhizosphereMILRSASLTCTVCALLPIALGAAQLPGPIPREKEPPSQTTRMREKQLPLTVSGCIRGKRLQLSSVFRGDGVADLLNTDQLLLEGPKDLMAQLRKEHEGHDDELTGVAILPPSPDGSTTTDVQTKDLGKKGRITVGVRESNGPQGEVRQTVRFRVASLQHMHEGCSR*
Ga0068864_10142469213300005618Switchgrass RhizosphereVSLSCAACAMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL*
Ga0068864_10168424313300005618Switchgrass RhizosphereIRGKRLLLAHSDGTAEILNADELVLEGSKDLMQQLRRQHDNHQDELSGVAIITASPDGSTTTDVETRSLGKKGRLTLGVREADGLTGSVRQPVRFRVTSVQHLHDGCSRL*
Ga0068866_1005073133300005718Miscanthus RhizosphereMALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEACSRF*
Ga0068861_10049435933300005719Switchgrass RhizosphereQTTRMQEKHLPLTVQGCIRGKRLVLTSIDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDVESKPIGKKGRLTLGVRESSGVTGDVRQPVRFKVTGLRHLHEGCSRL*
Ga0068861_10195874713300005719Switchgrass RhizosphereMTLRSASLSCAACVMLPIALSAAQLPGPVPREKEPPSQATRMREKHLALTVQGCIRGRRLLLSSLSPGDGIAEILNTDELLLEGSKDLMAQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTIGVRESNGLQGDVRQPVRFRVTGLRHVHEGCTRL*
Ga0068870_1012979513300005840Miscanthus RhizosphereQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL*
Ga0068860_10035260933300005843Switchgrass RhizosphereTVSGCIRGKRLQLSSVFRGDGVADLLNTDQLLLEGPKDLMAQLRKEHEGHDDELTGVAILPPSPDGSTTTDVQTKDLGKKGRITVGVRESNGPQGEVRQTVRFRVASLQHMHEGCSR*
Ga0079215_1004946313300006894Agricultural SoilMPACRNRCMTFRSALLSFAACAALPVVLAAAQLPGPVPREKEPPSQQTRMHEKRLSLIVNGCIRGKRLVLSNTDGTADLLNADELLLDGPKELMLQLRREHESHDDELTGVAVLKPSPDGSSTTDIESKPLGKKGRITLGVRESDGLVGNVRQPVRFRVTSLRHIHDGCGRL*
Ga0079216_1184991013300006918Agricultural SoilFHPALLSCAACAVLPLALSAAQLPGPVPREKEPPSQQTRMQEKRLPLAVYGCTRGKRFVLSSMSEREGIISLLNANELQLEGPKELLTQLRREHENHDDELTGIAIVPPSPDGSSTSEGQTKELGKKARITLGVRENSGPTGNVRRPVRFRVETVRHLQDACTVF*
Ga0079218_1067742113300007004Agricultural SoilKRLSLIVNGCIRGKRLVLSNTDGTADLLNADELLLDGPKELMLQLRREHENHDDELTGVAVLKPSPDGSSTTDIESKPLGKKGRITLGVRESDGLVGNVRQPVRFRVTSLRHIHDGCGRL
Ga0111539_1255003313300009094Populus RhizosphereLSIAACAAVPIAVAAVQLPGQIPREKEPPSQQTRMQEKRLPLTVYGCVRGKRLVLSSMSSREGIIDLLNANELLLDGPKELLTQLRREHEDHDDEFTGIAIVPPSPDGSSTSDGQTKELGKKSKITLGVRESSGPTGNVRRTVRFRVEAVRHLHDACTAV*
Ga0105245_1007320323300009098Miscanthus RhizosphereMTLRSVSLSCAACAMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNAYDLVLEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESGGVTGDVRQPVRFKVTGLRHLHEGCSRL*
Ga0075418_1018262523300009100Populus RhizosphereMTFRTALLAFVTCASLPVAVAGIQLPGPIPREKEPPSQQTRMQEKRLSLTVNGCVRGKRLVLSSMSEHRGIKSVLNADELQLEGPKELLTQIRREHENHDDEFTGIAIVPPSPDGSSTSEGSTKELGKKARITLGVRESSGPTGNVKRAVRFRVEAVHHLSDGCTAV*
Ga0114129_1058376823300009147Populus RhizosphereMLPIALAAAQLPGPVPREKEPPSQATRMREKHLALTVQGCIRGRRLLLSSLSPGDGIADILNTDELLLEGSKDLMAQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRLTVGVRESNGLQGDVRQPVRFRVTGLRHVHEGCSRY*
Ga0105243_1001494543300009148Miscanthus RhizosphereMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL*
Ga0075423_1247454513300009162Populus RhizosphereEELCEGFGRGHGGAAILARASLPEPIMTLRSASLSCAACVMLPIALSAAQLPGPVPREKEPPSQATRMREKHLALTVQGCIRGRRLLLSSLSPGDGIAEILNTDELLLEGSKDLMAQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRLTVGVRESNGLQGDVRQPVRFRVTGLRHVHE
Ga0105242_1048964023300009176Miscanthus RhizosphereMALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELVLEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESDGLQGDVRQPVRFKVTGLRHLHEACSRF*
Ga0105248_1025540133300009177Switchgrass RhizosphereMTLRSVSLSCAAYAMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSNDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL*
Ga0105340_101908423300009610SoilMTFCSALLSCAACATLPVALAAAQLPGPIPREKEPPSQQTRMQEKRLPLTVRGCERGKRLVLSQTSDISLLNANELLLEGPKELLTQLRREHENHDDELTGIAIVPPSPDGSSTTEGQTKEIGKKARITLGVRESSGPTGDVRRTVRFRLEAVRHLQDGCTVL*
Ga0134123_1138437913300010403Terrestrial SoilHLPLTLRGCIRGKRLLLSLSPGDGIADLLNADELVLEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTLGVRESNGLQGDVRQPVRFRVTGLRHLHEACTRL*
Ga0105246_1095845413300011119Miscanthus RhizosphereMALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLVLTSIDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDVESKPIGKKGRLTLGVRESSGATGEV
Ga0105246_1259384923300011119Miscanthus RhizosphereTRMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESDGLQGDVRQPVRFKVTGVRHLHEACSRF*
Ga0137325_104401013300011415SoilMTFRLASLSFAACAALPLALSAAQLPGPIPREKDPPSQQTRMQEKRLAVTVYGCIRGKRLVLSSMSEREGLISLLNANELQLEGPKELLTQLRREHENHDDELRGIAIVPPSPDGSSTSEGETKELGKKARITLGVRESSGPTGNVRRTVRFRVEGVRHLQDACTVF*
Ga0137427_1027953223300011445SoilAAQLPGPIPREKEPPSQQTRMQEKRLPLTVRGCERGKRLVLSQTSDISLLNANELLLEGPKELLTQLRREHENHDDELTGIAIVPPSPDGSSTTEGQTKEIGKKARITLGVRESSGPTGDVRRTVRFRLEAVRHLQDGCTVL*
Ga0157290_1029819213300012909SoilMTFRSALLAFVSCASLPVAVAGMQLPGPIPREKEPPSQQTRMQEKRLSLTVNGCVRGKRLVLSSMSEHRGIKSVLNADELQLEGPKELLTQIRREHENHDDEFTGIAIVPPSPDGSSTSEGSTKELGKKARITLGVRESSGPTGNVKRAVRFRVEAVHH
Ga0157375_1072874323300013308Miscanthus RhizosphereMTLRSASLSCAACAILPIALAAAQGPGPVPREKEPPSQAARMREKQLPLTVTGCIHGKRLLLAHSDGTAEILNADELVLEGSKDLMQQLRRQHDNHQDELSGVAIITASPDGSTTTDVETRSLGKKGRLTLGVREADGLTGSVRQPVRFRVTSVQHLHDGCSRL*
Ga0157380_1205772613300014326Switchgrass RhizosphereMTLPSVSLSCAACAVLPIALAAAQLPGAVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLSLSPSDGIADLLNADELVLEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTVGVRESNGLQGSVRQPVRFRVT
Ga0157377_1056840713300014745Miscanthus RhizosphereMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGPSTTDIESKPLAKKGRLTLGVRESSGAT
Ga0157377_1080478823300014745Miscanthus RhizosphereLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLVLTSIDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDVESKPIGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL*
Ga0157376_1294445413300014969Miscanthus RhizosphereALAAAQGPGPVPREKEPPSQAARMREKQLPLTVTGCIHGKRLLLAHSDGTAEILNADELVLEGSKDLMQQLRRQHDNHHDELSGVAIIPASPDGSTTTAVETKSLGKKGRLTLGVREADGLTGSVRQPVRFRVTGVQYVHDGCGRW*
Ga0132256_10058795223300015372Arabidopsis RhizosphereMALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTVGVRESDGLQGDVRQPVRFKVTGLRQLHEACSRF*
Ga0132257_10148788813300015373Arabidopsis RhizosphereMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESDGLQGDVRQPVRFKVTGLRHLHEACSRF*
Ga0132257_10415453813300015373Arabidopsis RhizosphereMLPIALAAAQLPGPIPREKEPPSQTTRMQEKHVPLTVQGCIRGKRLVLSSIDGTANLLNADELALEGSKDLLQQLRREHEGHQDELTGTAILKPSPDGSSTTDVESKPIGKKGRLTLGVRESSGVTGDVRQPVRFKVTGLRHLH
Ga0163161_1117963913300017792Switchgrass RhizosphereMQEKHLPLTVQGCIRGKRLVLTSIDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDVESKPIGRKGRLTLGVRESSGVTGDVRQPVRFKVTG
Ga0190266_1003194633300017965SoilMTFRSALLSCAACAVLPFAVAAAQLPGPVPREKEPPSQQTRMHEKRLNLTVNGCVRGGRLVLSSLSDGTASLLNADELLLEGPKELLLQIRREHENHDDEFTGIATVRPSPDGSTTTEAESKPLGKKGRVTVGVRESSGPTGNLRQPVRFRVTSVRHLRDSCARF
Ga0190270_1232828013300018469SoilKRLVLSNTDGTADLLNADELLLDGPKELLLQLRREHENHDDELTGVAILKPSPDGSSTTDVESKPLGKKGRITLGVRESDGLVGNVRQPVRFRVTSLRHIHDSCGRV
Ga0190274_1024430623300018476SoilMTFRLASISCAACAVLPFAVAAAQLPGPIPREKEPPSQQTRMHEKRLNLTVNGCVRGSRLVLSSLSDGTASLLNADELLLEGPKELLLQIRREHESHDDEFTGVATVRPSPDGSTTTEAESKPLGKKGRITVGVRESSGPTGNLRQPVRFRVTSIRHLRDSCARF
Ga0190274_1081610023300018476SoilSPGPIPREKDPPSQQTRMQEKRLALTVYGCVRGKRLVLSSMSEREGLISLLNANELQLEGPKELLTQLRREHENHDDELRGIAIVPPSPDGSSTSEGETKELGKKARITLGVRESSGPTGNVRRTVRFRVEGVRHLQDACTVF
Ga0190274_1090212723300018476SoilMTFRSALLSCAACAVLPFAVAAAQLPGSIPREKEPPSQQTRMHEKRLNLTVNGCVRGNRLLLSSLSDGTASLLNADELLLEGPKELLLQIRREHENHDDEFTGVATVKPSPDGSTTTEAESKPLGKKGRITVGVRESSGPTGNLRQPVRFRVTSVRHLRDSCARF
Ga0190271_1031221513300018481SoilRLPLTVNGSVRGSRLLLLSRSVDDGIASVLNADELLLEGPKELLQQIRREHDNHDDELTGVATVKPSPDGSSTTEAESKPLGKKGRITLGVRESSGPTGNLRQPVRFRVTAIRHLHDACTRL
Ga0190264_1090721913300019377SoilMTFRSALLSCAACATLPVALAGGQLPGPVPREKEPPSQQTRMQEKRLPLAVYGCIRGKRFVLSSMSDREGIISLLNANELQLEGPKELLTQLRREHENHDDELTGIAIVPPSPDGSSTSEGQTKELGKKARITLGVRESSGPTGNVRRTVRFRVEAVRHLQDACTVLKNANAEGGLQSALRYSNRIGS
Ga0207682_1004244813300025893Miscanthus RhizosphereMALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL
Ga0207682_1052325813300025893Miscanthus RhizosphereMTLRSVSLSCAACAMLPIALAAAQLPGSVPREKEPPSQTTRMQEKHLPLTLRGCIRGKRLLLSLSPGDGIADLLNADELVLEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTLGVRESNGLQGDVRQPVRFRVTGLRHLH
Ga0207645_1015889913300025907Miscanthus RhizospherePGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEACSRF
Ga0207643_1004978833300025908Miscanthus RhizosphereMTLRSVSLSCAACAMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL
Ga0207684_1051684013300025910Corn, Switchgrass And Miscanthus RhizosphereMREKHLALTVQGCIRGRRLLLSSLSPGDGIAEILNTDELLLEGSKDLMAQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTIGVRESNGLQGDVRQPVRFRVTGLRHVHEGCTRL
Ga0207662_1008512233300025918Switchgrass RhizosphereMTLRSVSLSCAACAMLPIALAAAQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELVLEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL
Ga0207681_1058863623300025923Switchgrass RhizosphereSCAACVMLPIALSAAQLPGPVHREKEPPSQATRMREKHLALTVQGCIRGRRLLLSSLSPGDGIAEILNTDELLLDGSKDLMAQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTIGVRESNGLQGDVRQPVRFRVTGLRHVHEGCTRL
Ga0207659_1035776913300025926Miscanthus RhizosphereIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL
Ga0207701_1017701723300025930Corn, Switchgrass And Miscanthus RhizosphereMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL
Ga0207644_1005378153300025931Switchgrass RhizosphereMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESDGLQGDVRQPVRFKVTGLRHLHEACSRF
Ga0207670_1052854313300025936Switchgrass RhizosphereLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLVPLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL
Ga0207669_1098744923300025937Miscanthus RhizosphereEPPSQTTRMQEKHLPLTVQGCIRGKRLLLSSLADGIADLLNADELVLEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTLGVRESNGLQGDVRQPVRFRVTGLRHLHEACTRL
Ga0207691_1002947113300025940Miscanthus RhizosphereGHGGAAILARAPVAGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESDGLQGDVRQPVRFKVTGLRHLHEACSRF
Ga0207679_1026059923300025945Corn RhizosphereMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESAGLQGDVRQPVRFKVTGLRHLHEACSRF
Ga0207651_1030908633300025960Switchgrass RhizosphereMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESDGLQGDVRQPVRFKVTGVRHLHEACSRF
Ga0207658_1032526313300025986Switchgrass RhizosphereTMILRSASLTCTVCALLPIALGAAQLPGPIPREKEPPSQTTRMREKQLPLTVSGCIRGKRLQLSSVFRGDGVADLLNTDQLLLEGPKDLMAQLRKEHEGHDDELTGVAILPPSPDGSTTTDVQTKDLGKKGRITVGVRESNGPQGEVRQTVRFRVASLQHMHEGCSR
Ga0207677_1024796513300026023Miscanthus RhizospherePQLPGPVPREKEPPSQTTRMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHDDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESDGLQGDVRQPVRFKVTGLRHLHEACSRF
Ga0207703_1001419043300026035Switchgrass RhizosphereMILRSASLTCTVCALLPIALGAAQLPGPIPREKEPPSQTTRMREKQLPLTVSGCIRGKRLQLSSVFRGDGVADLLNTDQLLLEGPKDLMAQLRKEHEGHDDELTGVAILPPSPDGSTTTDVQTKDLGKKGRITVGVRESNGPQGEVRQTVRFRVASLQHMHEGCSR
Ga0207702_1249018423300026078Corn RhizosphereTTRMQEKHLPLTVQGCIRGKRLLLSSLDGTANLLNADELALEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDIESKPLGKKGRLTLGVRESSGATGEVRQPVRFKVTGLRHLHEGCSRL
Ga0207675_10274915313300026118Switchgrass RhizosphereMTLRSASLSCAACVMLPIALSAAQLPGPVPREKEPPSQATRMREKHLALTVQGCIRGRRLLLSSLSPGDGIAEILNTDELLLEGSKDLMAQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTIGVRESNGLQGDVRQPVRF
Ga0207683_1041918523300026121Miscanthus RhizosphereMTLRSVSLSCAACAMLPIALAAAQLPGSVPREKEPPSQTTRMQEKHLPLTLRGCIRGKRLLLSLSPGDGIADLLNADELVLEGSKDLLQQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTLGVRESNGLQGDVRQPVRFRVTGLRHLHEACTRL
Ga0209486_1017895613300027886Agricultural SoilMPACRNRCMTFRSALLSFAACAALPVVLAAAQLPGPVPREKEPPSQQTRMHEKRLSLIVNGCIRGKRLVLSNTDGTADLLNADELLLDGPKELMLQLRREHENHDDELTGVAVLKPSPDGSSTTDIESKPLGKKGRITLGVRESDGLVGNVRQPVRFRVTSLRHIHDGCGRV
Ga0268264_1038754333300028381Switchgrass RhizosphereTVSGCIRGKRLQLSSVFRGDGVADLLNTDQLLLEGPKDLMAQLRKEHEGHDDELTGVAILPPSPDGSTTTDVQTKDLGKKGRITVGVRESNGPQGEVRQTVRFRVASLQHMHEGCSR
Ga0268264_1174158013300028381Switchgrass RhizosphereARPSLPQPIMTLRSASLSCAACVMLPIALSAAQLPGPVPREKEPPSQATRMREKHLALTVQGCIRGRRLLLSSLSPGDGIAEILNTDELLLEGSKDLMAQLRREHEGHEDELTGTAILKPSPDGSSTTDVESKPLGKKGRVTIGVRESNGLQGDVRQPVRFRVTGLRHVHEGCTRL
Ga0307506_1004752223300031366SoilMTLRSASLSCAACAILPIALAAAQLPGPVPREKEPPSQTTRMREKQLPLTVAGCIRGKRLVLAHTDGAAELLNADELLLEGSKDLMQQLRRQHDNHQDELSGVAILPPSPDGSTTTDVETKSLGKKGRLTLGVREADGVTGSVRQPVRFRVTGIQHLHDGCSRL
Ga0310900_1026005123300031908SoilMPFRSALLSIAACAAVPFAVAAVQLPGTIPREKEPPTQQTRMQEKRLPLTVYGCVRGKRLVLSSMSSRKGIIDLLNANELLLEGPKELLTQLRRDHEDHDDEFTGIAIVPPSPDGSSTSDGQTKELGKKSKITLGVRESSGPTGNVRRTVRFRVEAVRHLHDACTAV
Ga0310900_1069393923300031908SoilMTVRSALLSIAACAALPIAVAAVQVPGPIPREKEPPSQQTRMQEKRLSLTVYGCVRGKRLVLSSMSSREGIIDLLNANELLLEGPKELLTQLRREHEDHDDEFTGIAIVPPSPDGSSTSEGETKELGKKTRVTLGVRESSGPTGNVRRTVRFRVEAIRHLHDACTAF
Ga0310884_1079461113300031944SoilTVYGCIRGKRLVLSSMSSREGIIDLLNANELLLEGPKELLTQLRREHEDHDDEFTGIAIVPPSPDGSSTSEGETKELGKKTRVTLGVRESSGPTGNVRRTVRFRVEAIRHLHDACTAF
Ga0310890_1047068823300032075SoilMPFRSALLSIAACAAVPFAVAAVQLPGTIPREKEPPTQQTRMQEKRLPLTVYGCVRGKRLVLSSMSSRKGIIDLLNANELLLEGPKELLTQLRRDHEDHDDEFTGIAIVPPSPDGSSTSEGETKELGKKTRVTLGVRESSGPTGNVRRTVRFRVEAIRHLHDACTAF
Ga0315910_1057395023300032144SoilMTFRSALLAFVSCASLPVAVAGMQLPGPIPREKEPPSQQTRMQEKRLSLTVNGCVRGKRLVLSSMAEHRGIKSVLNADELQLEGPKELLTQIRREHENHDDEFAGIAIVPPSPDGSSTSEGSTKELGKKARITLGVRESSGPTGNVKR
Ga0315910_1083708823300032144SoilIPREKEPPSQQTRMQEKRLPLTVYGCVRGKRLVLSSMSSREGIIDLLNANELLLEGPKELLKQLRREHEDHDDEFTGIAIVPPSPDGSSTSDGQTKELGKKSKITLGVRESSGPTGNVRRTVRFKVESVRHLYDACTAF
Ga0315912_1114709823300032157SoilMPLRRTLLACFAAAALPIAAGAQLQGPIPREKEPPSQSQSRMKEKQLPLSITGCIRGKRLRLGSQTFRDSTAALLNTDELLLEGQKELMQQLRREHDEHEDELTGVAILQTPADGSSTTDIESKPLGKKGRITMGVRESSGPTGNLRQPVRFRVTALR
Ga0310889_1019628223300032179SoilPPMTVRSALLSIAACAALPIAVAAVQVPGPIPREKEPPSQQTRMQEKRLSLTVYGCVRGKRLVLSSMSSREGIIDLLNANELLLEGPKELLTQLRREHEDHDDEFTGIAIVPPSPDGSSTSEGETKELGKKTRVTLGVRESSGPTGNVRRTVRFRVEAIRHLHDACTAF
Ga0364927_0008238_1667_21583300034148SedimentMTFCSALLSCAACATLPVALAAAQLPGPIPREKEPPSQQTRMQEKRLPLTVRGCVRGKRLVLSQTSDISLLNANELLLEGPKELLTQLRREHENHDDELTGIAIVPPSADGSSTTEGQTKEIGKKARITLGVRESSGPTGDVRRTVRFGLEAVRHLHDACTVL
Ga0364935_0029657_712_12033300034151SedimentMPFCSALLSCAACATLPVALAAAQLPGPIPREKEPPSQQTRMQEKRLPLTVRGCVRGKRLVLSQTSDISLLNANELLLEGPKELLTQLRREHENHDDELTGIAIVPPSADGSSTTEGQTKEIGKKARITLGVRESSGPTGNVRRTVRFRVEGVRHLQDACTVF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.