Metagenome Family F104425

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104425
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	82 residues
Representative Sequence	KLGYNYRAYATESDSEKPITHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWNIAPTIEIKPNV
Number of Associated Samples	68
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	8.00 %
% of genes from short scaffolds (< 2000 bps)	9.00 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (35.000 % of family members)
Environment Ontology (ENVO)	Unclassified (87.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (64.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112. 1JGI12421J11937_100981941 2RCM37_12569661 3metazooDRAFT_12700201 4B570J40625_1015444162 5Ga0068876_107946732 6Ga0049080_100694623 7Ga0049082_102480391 8Ga0114880_10530811 9Ga0114973_102628413 10Ga0114962_100993963 11Ga0114962_106205152 12Ga0114968_100669431 13Ga0114977_101419793 14Ga0114978_102662712 15Ga0114978_103878371 16Ga0114978_105983362 17Ga0114978_108163241 18Ga0114970_106485071 19Ga0114975_107395561 20Ga0114979_105079001 21Ga0114969_100590101 22Ga0114974_100535341 23Ga0114974_101694793 24Ga0114976_103163921 25Ga0114964_103756523 26Ga0129333_110715302 27Ga0129333_115569781 28Ga0133913_106667974 29Ga0133913_119491752 30Ga0133913_124225562 31Ga0133913_134174342 32Ga0164293_105026003 33Ga0164293_106785373 34Ga0164293_107316122 35Ga0164293_109983201 36Ga0164292_108418891 37Ga0177922_105042611 38Ga0181348_10989941 39Ga0211732_15375602 40Ga0211736_105210173 41Ga0211734_109417501 42Ga0211733_101859132 43Ga0211726_102991741 44Ga0211726_106010052 45Ga0211729_101895151 46Ga0211729_101896962 47Ga0211729_109334462 48Ga0211731_103879133 49Ga0208232_10175401 50Ga0214172_10152471 51Ga0194133_100196391 52Ga0194133_101964303 53Ga0181351_12463603 54Ga0214921_105253091 55Ga0214919_108257701 56Ga0208974_11232381 57Ga0208975_11434672 58Ga0209553_12384592 59Ga0209297_13104161 60Ga0209088_102803561 61Ga0209088_104242622 62Ga0209500_101708363 63Ga0209353_101446492 64Ga0209990_104955572 65Ga0209400_10763191 66Ga0209400_13458152 67Ga0315909_101659411 68Ga0315909_106230031 69Ga0315901_111826812 70Ga0316218_12482282 71Ga0316230_10207428 72Ga0316231_11493165 73Ga0334985_0604198_64_375 74Ga0334985_0793910_3_167 75Ga0335005_0577857_14_325 76Ga0334987_0616363_1_255 77Ga0335028_0319863_703_912 78Ga0335028_0626791_3_224 79Ga0335020_0207495_656_964 80Ga0335020_0239770_742_897 81Ga0335020_0540779_77_385 82Ga0335012_0111681_1174_1482 83Ga0335012_0144401_2_196 84Ga0335012_0401338_2_286 85Ga0335012_0455352_413_613 86Ga0335012_0503468_285_572 87Ga0335022_0342558_545_829 88Ga0335029_0606577_3_191 89Ga0335029_0619033_2_244 90Ga0335029_0704406_331_546 91Ga0335029_0714199_2_163 92Ga0335031_0454080_48_338 93Ga0335035_0413986_65_376 94Ga0335050_0263152_681_845 95Ga0335055_0266754_1_165 96Ga0335055_0298250_18_326 97Ga0335068_0217893_779_991 98Ga0335068_0590283_332_502 99Ga0335056_0565820_2_190 100Ga0335048_0398972_44_352
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112. 1JGI12421J11937_100981941 2RCM37_12569661 3metazooDRAFT_12700201 4Ga0068876_107946732 5Ga0049080_100694623 6Ga0049082_102480391 7Ga0114973_102628413 8Ga0114962_106205152 9Ga0129333_110715302 10Ga0181348_10989941 11Ga0211731_103879133 12Ga0214172_10152471 13Ga0315901_111826812 14Ga0316231_11493165
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1Ga0335029_0619033_2_244 2RCM37_12569661 3metazooDRAFT_12700201 4Ga0068876_107946732 5Ga0114962_100993963 6Ga0114977_101419793 7Ga0114978_102662712 8Ga0114978_105983362 9Ga0114978_108163241 10Ga0114969_100590101 11Ga0129333_110715302 12Ga0164293_105026003 13Ga0177922_105042611 14Ga0181348_10989941 15Ga0211732_15375602 16Ga0211729_101895151 17Ga0211729_101896962 18Ga0214172_10152471 19Ga0194133_100196391 20Ga0209088_104242622 21Ga0209400_13458152 22Ga0315909_101659411 23Ga0316218_12482282 24Ga0335012_0401338_2_286
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.26% β-sheet: 12.96% Coil/Unstructured: 77.78%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF00768	Peptidase_S11	66.00
PF00313	CSD	2.00
PF00211	Guanylate_cyc	2.00
PF02668	TauD	2.00
PF03721	UDPG_MGDP_dh_N	1.00
PF14235	DUF4337	1.00
PF05226	CHASE2	1.00
PF01471	PG_binding_1	1.00

Showing 1 to 8 of 8 entries

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COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	66.00
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.00
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.00
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.00
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.00
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.00
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	1.00
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	1.00
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	1.00

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300008450\|Ga0114880_1053081	Not Available	1705	Open in IMG/M
3300009151\|Ga0114962_10099396	Not Available	1814	Open in IMG/M
3300010157\|Ga0114964_10375652	Not Available	671	Open in IMG/M
3300010354\|Ga0129333_11556978	Not Available	540	Open in IMG/M
3300013004\|Ga0164293_10502600	Not Available	800	Open in IMG/M
3300013004\|Ga0164293_10678537	Not Available	662	Open in IMG/M
3300013005\|Ga0164292_10841889	Not Available	578	Open in IMG/M
3300020161\|Ga0211726_10299174	Not Available	614	Open in IMG/M
3300034102\|Ga0335029_0606577	Not Available	612	Open in IMG/M

Showing 1 to 9 of 9 entries

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Environmental Properties

Associated Habitat Types

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Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	98.00%
Marine	Environmental → Aquatic → Marine	2.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	2.00%
Lake	Environmental → Aquatic → Freshwater → Lake	76.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	18.00%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.00%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.00%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.00%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	4.00%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	76.00%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	10.00%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.00%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	35.00%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	11.00%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.00%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	3.00%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.00%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	27.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	6.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.00%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.00%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.00%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	1.00%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	1.00%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300001850	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM37, ROCA_DNA234_0.2um_Ob_C_2a	Environmental	Open in IMG/M
3300002201	Freshwater microbial communities from San Paulo Zoo lake, Brazil - SEP 2013	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M

Showing 1 to 10 of 68 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100981941	3300000756	Freshwater And Sediment	SGGYIVLTTDACPNAGAVKLGYTYRAYATESDSEKPATHEGCWDSPSIADAPKLQGVRIIPLVNLWFDGDMVTFPQTLFGPEKKRWDITPTIEVKPNV*
RCM37_12569661	3300001850	Marine Plankton	EECKIPEAKAKGFDSRAYATESDTDKPATHEGCWDSPDTAQAPRAQGVKIIPLVNLWFEGEIVFYPQNLFTPEKKRWDIITPTVEVKPNV*
metazooDRAFT_12700201	3300002201	Lake	VLTLEECHISEAKAKGFDSRAYATESDSENAVTHEGCWNSPDTAEAPNVKGVKIIPLVNLWFDGDIVFFPQTHFSPERKRWDIRTPTIEVKPNV*
B570J40625_1015444162	3300002835	Freshwater	LTTDACPNKDAVKLGYTYRAYATESDSEKPATHEGCWDSPSIADAPKLQGVKIIPLVNLWFDGDMVTFPQTMFGPEKKRWDIILPTIEVKPNV*
Ga0068876_107946732	3300005527	Freshwater Lake	NESGGYVVLTLEECKFPEAVKLGFDSRAYATETDSEQPVTHEGCWNSPDTAAAPNVPGVTIITLVNLWFDGDIVFYPQNMFGPEKRRWNTVKPNI*
Ga0049080_100694623	3300005582	Freshwater Lentic	THEGCWDSPSVADAPKLQGVRIIPLVNLWFDGDTVTFPQTMFTPEKKRWNIAPTIEVKPNV*
Ga0049082_102480391	3300005584	Freshwater Lentic	ENPATHEGCWVSPSLADAPKMEGVRIIPLVNIWFDGDTVTFPQILFGPEKRRWDIKLPESTVKPNV*
Ga0114880_10530811	3300008450	Freshwater Lake	LTLEECKFPEAVKLGFDSRAYATETDSEQPATHEGCWNSPDTAAAPKAPGVTIIPLVNLWFDGDIVFYPQNLFGPEKRRWDIVKPNV*
Ga0114973_102628413	3300009068	Freshwater Lake	YKYRAYATESDSEKPVTHEGCWVSPDIADAPKMEGVRIIPLVNLWFDGDLITFPQTMFSPEKKRWDIKLPEITVKPNV*
Ga0114962_100993963	3300009151	Freshwater Lake	MPNESGGYITLTTDACPDDYATKLGYKYRAYATESEGEKPASHEGCWVSPSVADAPKMEGVRIIPLVNLWFDGDIVTFPQTLFGPEKRRWNIAPTIEVKPNV*
Ga0114962_106205152	3300009151	Freshwater Lake	SPSTADAPKLQGVKIIPLVNLWFNGDMVTFPQTMFGPEKKHWDIILTTIEVKPNV*
Ga0114968_100669431	3300009155	Freshwater Lake	LTTNICPNADAVKLGYKYRAYATESDSEKPVTHEGCWVSPGIADAPKMEGVKIIPLVNLWFDGDLITFPQTMFSPEKKRWDIKLPEITVKPNV*
Ga0114977_101419793	3300009158	Freshwater Lake	ILTTDACPNISAVKLGYMYRAYATESDSEKPATHEGCWDSPSVADAPKMEGVRIIPLVNLWFDGDMATFPQTMFGPEKKRWDIKLPEITVKPNV*
Ga0114978_102662712	3300009159	Freshwater Lake	CPNAGAVKLGYNYRAYATESDSEKPVTHEGCWDSPSIADAPKLQGVKIIPLVNLWFDGDMVTFPQTLFTPEKKRWIITPTIEVKPNV*
Ga0114978_103878371	3300009159	Freshwater Lake	HEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMITFPQTLFTPEKKRWNIAPTIEIKPTV
Ga0114978_105983362	3300009159	Freshwater Lake	MPNESGGYIVLTTDACPNAGAVKLGYTYRAYATESEGEKPATHEGCWDSPSVADAPKLQGVKIIPLVNLWFDGDVVTFPQTLFTPEKKRWNIAPTIEVKPNV*
Ga0114978_108163241	3300009159	Freshwater Lake	KKGYTYRAYATESDSDKPATHEGCWDSPSIADAPKLQGVKIIPLVNLWFDGDMVTFPQTMFSPEKKRWDLKLPEITVKPNV*
Ga0114970_106485071	3300009163	Freshwater Lake	MPNESGGFIVLTTDACPNTSAAKLGYKYRAYATESDSEKPATHEGCWDSPSLADAPKMEGIRIIPLVNLWFDGDLITFPQTMFGPEKKRWDIKLPEITVKPNV*
Ga0114975_107395561	3300009164	Freshwater Lake	YIVLTTDACPNTDAAKKGYKYRAYATESDSEKPATHEGCWDSPSVADVPKMEGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWDLKLPEITVKPNV*
Ga0114979_105079001	3300009180	Freshwater Lake	THEGCWDSPSVADAPKMEGVRIIPLVNLWFDGDMATFPQTMFGPEKKRWDIKLPEITVKPNV*
Ga0114969_100590101	3300009181	Freshwater Lake	MPNESGGYIVLTTDACPNTDAVKLGYKYRAYATESDSEKPVTHEGCWVSPGIADAPKMEGVKIIPLVNLWFDGDLITFPQTMFSPEKKRWDIKLPEITVKPNV*
Ga0114974_100535341	3300009183	Freshwater Lake	MPNESGGYIVLTTDACPDDYATKLGYKYRAYATESDSEKPATHEGCWDSPSTAGAPKLQGVRIIPLVNLWFNGDMVTFPQTMFGPEKRRWNIAPTIE
Ga0114974_101694793	3300009183	Freshwater Lake	DACPIADAAKLGYKYRAYATESDSEKPATHEGCWDSPSTADAPKLQGVKIIPLVNLWFNGDMVTFPQTMFGSEKKRWDIILPTIEVKPNV*
Ga0114976_103163921	3300009184	Freshwater Lake	GGYIVLTTDACPNTDAAKKGYKYRAYATESDSEKPATHEGCWDSPSVADVPKMEGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWDLKLPEITVKPNV*
Ga0114964_103756523	3300010157	Freshwater Lake	ATESEGEKPASHEGCWVSPSVADAPKMEGVRIIPLVNLWFDGDIVTFPQTLFGPEKRRWNIAPTIEVKPNV*
Ga0129333_110715302	3300010354	Freshwater To Marine Saline Gradient	AVKLGFDSRAYATETDSEQPATHEGCWNSPSTSEAPRIKGVRIIPLVNLWFEGDTVTFPQTMFSPEKRRWDVAPTIEVKPNV*
Ga0129333_115569781	3300010354	Freshwater To Marine Saline Gradient	KSKELYMPNESGGYVVLTLEPCKFPEAVKLGFDSRAYATETDSEQPATHEGCWNSPDTSAAPRVPGVTIIPLVNLWFDGDIVFYPQNLFGPERKRWNTVKPNV*
Ga0133913_106667974	3300010885	Freshwater Lake	MPNESGGYIVLTTDACPIADAAKLGYKYRAYATESDSEKPATHEGCWDSPSTAAAPKLQGVKIIPLVNLWFDGDMVTFPQTMFGPEKKRWDIILPTIEVKPNV*
Ga0133913_119491752	3300010885	Freshwater Lake	MPNESGGYIVLTTDACPNAGAVKLGYNYRAYATESDSEKPATHEGCWDSPSIADAPKLQGVKIIPLVNLWFDGDMVTFPQTLFTPEKKRWIITPTIEVKPNV*
Ga0133913_124225562	3300010885	Freshwater Lake	PNESGGYIVLTTDACPNTNAVKLGYNYRAYATESEGEKPATHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMITFPQTLFTPEKKRWNIAPTIEIKPTV*
Ga0133913_134174342	3300010885	Freshwater Lake	MPNESGGYIVLTTDACPNTDAAKKGYKYRAYATESDSEKPATHEGCWDSPSVADVPKMEGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWDLKLPEITVKPNV*
Ga0164293_105026003	3300013004	Freshwater	DSEKPVTHQGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGSEKRRWNVAPTIQVKPNV*
Ga0164293_106785373	3300013004	Freshwater	EKPATHEGCWDSPSVADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGPEKRRWNVAPTVEVKPNV*
Ga0164293_107316122	3300013004	Freshwater	TTDACPNTDAVKLGYTYRAYATESDSEKPVTHQGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMATFPQTLFGPEKRRWNIAPTIEVKPNV*
Ga0164293_109983201	3300013004	Freshwater	LTTDACPNTSAVKLGYNYRAYATESDSEKPATHEGCWDSPSVADAPKLQGVRIIPLVNLWFDGDMVTFPQTLFTPEKKRWDTAPTIEVKPNV*
Ga0164292_108418891	3300013005	Freshwater	MPNESGGYIVLTTDACPNAGAVKLGYNYRAYATESDSEKPVTHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGSEKRRWNVAPTIQVKPNV*
Ga0177922_105042611	3300013372	Freshwater	YATKLGYKYRAYATESDSENPATHEGCWVSPSLADAPKMEGVRIIPLVNIWFDGDMVTFPQTMFGSEKRRWDLKLPEITVKPNV*
Ga0181348_10989941	3300017784	Freshwater Lake	MPNESGGYIVLTIDACPNADVAKKGYKYRTYATESDGEKPVTHEGCWNSPSLADAPKMEGVRIIPLVNIWFDGDTVTFPQTLFGPEKRRWDNKLPESTVKPNV
Ga0211732_15375602	3300020141	Freshwater	EVAKKGYKYRAYATESDSEKPATHEGCWDSPSIADAPKLQGVRIIPLVNLWFDGDMATFPQTLFGPEKKRWNVTPTIEVKPNV
Ga0211736_105210173	3300020151	Freshwater	PKELYMPNESGGYIVLTTDACANTSAVKLGYTYRAYATESDSEKPATHEGCWDSPSIADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWDAITPTI
Ga0211734_109417501	3300020159	Freshwater	NTDAVKLGYNYRAYATESDSEKPVTHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMATFPQTLFGPEKKRWNVAPTIEIKPNV
Ga0211733_101859132	3300020160	Freshwater	YATESDSEKPVTHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMVTFPQTLFTPEKKRWDLKLPEITVKPNV
Ga0211726_102991741	3300020161	Freshwater	ATHEGCWDSPSIADAPKLQGVRIIPLVNLWFDGDMATFPQTMFGPEKKRWNITPIIEVKPNV
Ga0211726_106010052	3300020161	Freshwater	YRAYATESDSEKPATHEGCWDSPSIAAAPRMEGIRIIPLVNLWFDGDMVTLPQTMFGPEKRRWNIAPTIEVKPNV
Ga0211729_101895151	3300020172	Freshwater	SGGYIILTTDACPNAGAVKLGYMYRAYATESDSDKPATHEGCWDSPSVADAPRMEGVKIIPLVNLWFDGDMVTFPQTMFGLEKKRWDAITPTIEVKPNV
Ga0211729_101896962	3300020172	Freshwater	PNESGGYIVLTTDACPNTNAVKLGYNYRAYATESDSEKPVTHEGCWDSPSTADAPTLQGVRIIPLVNLWFDGDMVTFPQTLFTPEKKRWDLKLPEITVKPNV
Ga0211729_109334462	3300020172	Freshwater	VTHEGCWDSPSIADAPKLQGVRIIPLVNLWFDGDMATFPQTLFGPEKKRWNTAPTIEVKPNV
Ga0211731_103879133	3300020205	Freshwater	TESDSEKPAPHEGCWDSPSVADAPKLQGVRIVPLVNLWFDGDMVTFPQTMFGPLKRRWNVVPTVEVKPNV
Ga0208232_10175401	3300020527	Freshwater	PATHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMATFPQTMFGPEKKRWNVAPTIEVKPNV
Ga0214172_10152471	3300020733	Freshwater	IVLTLEDCKFPEAVKQGFDHRAYATESDSEKPATHEGCWDSPSTADAPRIQGIKIIPLVNLWFDGETATFPQTMFGPEKRRWYLKLPEITVKPNV
Ga0194133_100196391	3300021091	Freshwater Lake	LEECKFPEAVKLGFDSRAYATEKDSEQPATHEGCWNSPDTAESPKVPEVTIIPLVNLWFDGDIVFYPQNLFRPEKRRWNTIKPNV
Ga0194133_101964303	3300021091	Freshwater Lake	LEECKFPEAVKLGFDSRAYATEKDSEQPATHEGCWNSPDTAEAPKVPEVTIIPLVNLWFDGDIVFYPQNLFGPEKRRWGAVKPNV
Ga0181351_12463603	3300022407	Freshwater Lake	HEGCWVSPSIADAPKMEGVRIIPLVNLWFDSDTVTFPQTLFGPEKRRWDIKLPESTVKPN
Ga0214921_105253091	3300023174	Freshwater	SEKPVTHEGCWVSPSVADAPKMEGVRIIPLVNLWFDGDLITFPQTMFGPEKKRWDIKLPEITVKPNV
Ga0214919_108257701	3300023184	Freshwater	CWNSPSVADAPKSAGIRIIPLVNLWFDGDTVTFPQTMFAPEKKRWDLKLPEITVKPNV
Ga0208974_11232381	3300027608	Freshwater Lentic	VKLGYNYRAYATESDSEKSATHEGCWDSPSVADAPKLQGVRIIPLVNLWFDGDTVTFPQTMFTPEKKRWNIAPTIEVKPNV
Ga0208975_11434672	3300027659	Freshwater Lentic	HEGCWDSPSIGDAPKLQGVKIIPLVNLWFDGDMVTFPQTMFSPEKKRWDLKLPEITVKPN
Ga0209553_12384592	3300027688	Freshwater Lake	TESDSENPATHEGCWVSPSLADAPKMEGVRIIPLVNIWFDGDMVTFPQTLFGPEKRRWDIKLPESTVKPNV
Ga0209297_13104161	3300027733	Freshwater Lake	ILTTDACPNISAVKLGYMYRAYATESDSEKPATHEGCWDSPSVADAPKMEGVRIIPLVNLWFDGDMATFPQTMFGPEKKRWDIILPTIEVKPNV
Ga0209088_102803561	3300027763	Freshwater Lake	SPSVADAPKMEGVRIIPLVNLWFDGDMATFPQTMFGPEKKRWDIKLPEITVKPNV
Ga0209088_104242622	3300027763	Freshwater Lake	FVVLTIDACPIADAAKLGYKYRAYATESDSKKPATHEGCWDSPSTADAPKLQGVKIIPLVNLWFNGDMVTFPQTMFGPEKKRWDIILPTIEVKPNV
Ga0209500_101708363	3300027782	Freshwater Lake	SAVKLGYMYRAYATESDSEKPATHEGCWDSPSVADAPKMEGVRIIPLVNLWFDGDMATFPQTMFGPEKKRWDIKLPEITVKPNV
Ga0209353_101446492	3300027798	Freshwater Lake	TESDGENPATHEGCWNSPSLADAPKMEGVRIIPLVNIWFDGDTVTFPQTLFGPEKRRWDNKLPESTVKPNV
Ga0209990_104955572	3300027816	Freshwater Lake	YMPNESGGYVVLTLEECKFPEAVKLGFDSRAYATETDSEQPVTHEGCWNSPDTAAAPNVPGVTIITLVNLWFDGDIVFYPQNMFGPEKRRWNTVKPNI
Ga0209400_10763191	3300027963	Freshwater Lake	AVKLGYKYRAYATESDSEKPVTHEGCWVSPGIADAPKMEGVKIIPLVNLWFDGDLITFPQTMFSPEKKRWDIKLPEITVKPNV
Ga0209400_13458152	3300027963	Freshwater Lake	NHRAYATETEGDQPATHEGCWDSPSVADAPKMEGVRIIPLVNLWFDGDLITFPQTMFGPEKKRWDIKLPEITVKPNV
Ga0315909_101659411	3300031857	Freshwater	KLGFDSRAYATETDSEQPATHEGCWNSPDTSEAPRAPGVTIIPLVNLWFDGDIVFYPQNLFGPEKRRWDAVKPNL
Ga0315909_106230031	3300031857	Freshwater	EKPVTHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMATFPQTMFGPEKKRWDVTLTVKPNV
Ga0315901_111826812	3300031963	Freshwater	YATETDSEQPATHEGCWNSPDTAAAPKAPGVTIIPLVNLWFDGDIVFYPQNLFGPEKRRWDIVKPNV
Ga0316218_12482282	3300032117	Freshwater	AVKLGFDHRAYATESDSERPATHEGCWDSPSTADAPKLQGVKIIPLVNLWFDGDTATFPQTLFGPEKKRWDLKLPEITVKPNV
Ga0316230_10207428	3300032668	Freshwater	ESDSERPATHEGCWDSPSTADAPKLQGVKIIPLVNLWFDGDTATFPQTLFGPEKKRWDLKLPEITVKPNV
Ga0316231_11493165	3300032722	Freshwater	ISPSIADAPKDPRVKIIPLVNLWFDGTQVSYPVYMFGDEKKRWDLKLPEIEVRPKHIPNS
Ga0334985_0604198_64_375	3300034018	Freshwater	MPNESGGFIVLTTDACPNKDAVKLGYTYRAYATESDSEKPATHEGCWDSPSIADAPKLQGVKIIPLVNLWFDGDMVTFPQTMFGPEKKRWDIILPTIEVKPNV
Ga0334985_0793910_3_167	3300034018	Freshwater	SPSTADAPKLQGVRIIPLVNLWFDGDMATFPQTMFGPEKRRWNVAPTIEVKPNV
Ga0335005_0577857_14_325	3300034022	Freshwater	MPNESGGYIVLTTDACPNADAVKLGYNYRAYATESDSEKPVTHDGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMATFPQTMFGPEKKRWDLKLPEITVKPNV
Ga0334987_0616363_1_255	3300034061	Freshwater	SAVKLGYNYRAYATESDSEKPATHEGCWDSPSIADAPKLQGVRIIPLVNLWFDGDMATFPQTMFGPEKKRWDLKLPEITVKPNV
Ga0335028_0319863_703_912	3300034071	Freshwater	SDSEKPATHEGCWDSPSIADAPKLQGVKIIPLVNLWFDGDMVTFPQTMFGPEKKRWDIILPTIEVKPNV
Ga0335028_0626791_3_224	3300034071	Freshwater	AYATESDSEKPATHEGCWDSPSTANAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWNIAPTIEVKPNV
Ga0335020_0207495_656_964	3300034082	Freshwater	MPNESGGYIVLTTDACPNKDAVKLGYNYRAYATESDSEKPATHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWNVTPIIEVKPNV
Ga0335020_0239770_742_897	3300034082	Freshwater	IADAPRLQGVRIIPLVNLWFDGDMATFPQTMFGPEKKRWNIAPTIEVKPNV
Ga0335020_0540779_77_385	3300034082	Freshwater	MPNESGGYIILTTDACPNKDAIKLGYNYRAYATESDSEKPVTHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMATFPQTMFGPEKRRWNIAPTIEVKPNV
Ga0335012_0111681_1174_1482	3300034093	Freshwater	MLNESGGYIILTTDACPNTDAVKLGYNYRAYATESDSEKPITHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMATFPQTMFGPEKRRWNVAPTIEVKPNV
Ga0335012_0144401_2_196	3300034093	Freshwater	PATHEGCWDSPSIADAPKLQGVKIIPLVNLWFDGDMVTFPQTMFGPEKKRWDIILPTIEVKPNV
Ga0335012_0401338_2_286	3300034093	Freshwater	IVLTTDACPNAEAVKLGYNYRAYATESDSEKPATHEGCWDSPSVADAPKMEGVRIIPLVNLWFDGDMVTFPQTMFGPEKRRWNVAPTVEVKPNV
Ga0335012_0455352_413_613	3300034093	Freshwater	SEKPATHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWNVTPTIEVKPNV
Ga0335012_0503468_285_572	3300034093	Freshwater	YIVLITDACPNADAVKLGYNYRAYATESDSEKPIIHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMATFPQTLFGPEKRRWNIAPTIEVKPNV
Ga0335022_0342558_545_829	3300034095	Freshwater	IVLTTDACPNAGVVKLGYKYRAYATESDSEKPATHEGCWDSPSVADAPKMEGVRIIPLVNLWFDGDMVTFPQTMFGPEKRRWNVAPTVEVKPNV
Ga0335029_0606577_3_191	3300034102	Freshwater	VTHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMATFPQTMFGPEKKRWNVTPTIEVKPNV
Ga0335029_0619033_2_244	3300034102	Freshwater	KLGYNYRAYATESDSEKPITHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWNIAPTIEIKPNV
Ga0335029_0704406_331_546	3300034102	Freshwater	ATESDSEKPVTHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGSEKRRWNVAPTIQVKPNV
Ga0335029_0714199_2_163	3300034102	Freshwater	PSTADAPKLQGVRIIPLVNLWFDGDMATFPQTLFGPEKKRWNIAPTIEVKPNV
Ga0335031_0454080_48_338	3300034104	Freshwater	MPNESGGFIVLTTDACPNKDAVKLGYNYRAYATESDSEKPITHEGCWDSPSTVDAPKMEGVRIIPLVNLWFDGDMVTFPQTLFGPEKRRWNIAPTI
Ga0335035_0413986_65_376	3300034105	Freshwater	MPNESGGYIVLTTDACPNAEAVKLGYNYRAYATESDSEKPATHEGCWDSPSIADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWDLKLPEITVKPNV
Ga0335050_0263152_681_845	3300034108	Freshwater	PSIADAPKLQGVKIIPLVNLWFDGDMVTFPQTMFGPEKKRWDIILPTIEVKPNV
Ga0335055_0266754_1_165	3300034110	Freshwater	SPSTADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWNIAPTIEVKPNV
Ga0335055_0298250_18_326	3300034110	Freshwater	MPNESGGFIVLTTDACPNKDAVKLGYNYRAYATESDSEKPITHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMATFPQTMFGLEKRRWNIAPTIEVKPNV
Ga0335068_0217893_779_991	3300034116	Freshwater	TESDSEKPVTHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWNIAPTIEVKPNV
Ga0335068_0590283_332_502	3300034116	Freshwater	DSPSTADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWDLKLPEITVKPNV
Ga0335056_0565820_2_190	3300034120	Freshwater	THEGCWDSPSVADAPKLQGVRIIPLVNLWFDGDMVTFPQTMFGPEKKRWDLKLPEITVKPNV
Ga0335048_0398972_44_352	3300034356	Freshwater	MPNESGGYIVLTTDACPNADVAKLGYKWRAYATESDSEKPVTHEGCWDSPSTADAPKLQGVRIIPLVNLWFDGDMATFPQTLFGPEKRRWNIAPTIEVKPNV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters