Metagenome Family F104203

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Overview

Basic Information
Family ID	F104203
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	86 residues
Representative Sequence	VNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLANTRLYLLDEDHKITAEQVVYFVTS
Number of Associated Samples	69
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (70.000 % of family members)
Environment Ontology (ENVO)	Unclassified (90.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (70.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134. 1Ga0066903_1010812063 2Ga0066903_1049854761 3Ga0126373_122700502 4Ga0126373_124885891 5Ga0126378_100760784 6Ga0126378_113403412 7Ga0126381_1002533682 8Ga0126381_1046964011 9Ga0126369_127994823 10Ga0182041_119293011 11Ga0182041_119330091 12Ga0182034_108686131 13Ga0182040_106982781 14Ga0182037_110169291 15Ga0182037_120186201 16Ga0182039_114761522 17Ga0182038_116164791 18Ga0126371_131070452 19Ga0318516_102187083 20Ga0318534_101693701 21Ga0318534_107826261 22Ga0318541_103077691 23Ga0318538_104789761 24Ga0318573_102652122 25Ga0318515_101374051 26Ga0310915_101887933 27Ga0318555_102553051 28Ga0318555_104102802 29Ga0318542_103187242 30Ga0318561_105625121 31Ga0318574_107432261 32Ga0318572_100882923 33Ga0318572_107890722 34Ga0318572_108600101 35Ga0318560_102328171 36Ga0318560_107825201 37Ga0318496_101830961 38Ga0306917_115234041 39Ga0318493_100555461 40Ga0318493_103760331 41Ga0318500_101516892 42Ga0318492_101810551 43Ga0318494_101479351 44Ga0318494_102523271 45Ga0318535_102312921 46Ga0318554_100367285 47Ga0318546_110158041 48Ga0318566_104890581 49Ga0318552_106753002 50Ga0318529_102084643 51Ga0318529_104650761 52Ga0318548_100667271 53Ga0318523_102962191 54Ga0318565_102670151 55Ga0318497_100145621 56Ga0318497_101930071 57Ga0318567_100704074 58Ga0318567_102220961 59Ga0318567_103178011 60Ga0318567_104197591 61Ga0318567_104445451 62Ga0318567_107541101 63Ga0318564_101670521 64Ga0318499_100750211 65Ga0318511_103655012 66Ga0318512_101513902 67Ga0318495_102960832 68Ga0306925_112962532 69Ga0318536_102564802 70Ga0318520_107405582 71Ga0306923_117810741 72Ga0306921_102942984 73Ga0310913_103056981 74Ga0306926_119200281 75Ga0306922_101684381 76Ga0306922_109772021 77Ga0306922_111850472 78Ga0306922_115882601 79Ga0318562_101671101 80Ga0318562_106183301 81Ga0318563_102071512 82Ga0318507_101528781 83Ga0318507_103365701 84Ga0318549_102133752 85Ga0318558_101772241 86Ga0318558_105875801 87Ga0318570_103572381 88Ga0318575_100352771 89Ga0318533_105678131 90Ga0318513_100792481 91Ga0318513_101028593 92Ga0318553_104868221 93Ga0318553_107621461 94Ga0318525_102286931 95Ga0318525_105113421 96Ga0318518_105702231 97Ga0306920_1001615974 98Ga0306920_1010072741 99Ga0306920_1015088671 100Ga0318519_106032441
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134. 1Ga0066903_1010812063 2Ga0126373_122700502 3Ga0182037_110169291 4Ga0318555_102553051 5Ga0318574_107432261 6Ga0318558_105875801
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134. 1Ga0066903_1010812063 2Ga0126373_122700502 3Ga0182037_110169291 4Ga0318555_102553051 5Ga0318574_107432261 6Ga0318558_105875801
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.89% β-sheet: 38.55% Coil/Unstructured: 38.55%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF05988	DUF899	11.00
PF03795	YCII	9.00
PF13561	adh_short_C2	7.00
PF11706	zf-CGNR	4.00
PF08281	Sigma70_r4_2	3.00
PF13602	ADH_zinc_N_2	2.00
PF07690	MFS_1	1.00
PF01425	Amidase	1.00
PF03466	LysR_substrate	1.00
PF00892	EamA	1.00

Showing 1 to 10 of 10 entries

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COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	11.00
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	9.00
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.00

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
No data available in table

Environmental Properties

Associated Habitat Types

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Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	2.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	98.00%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	90.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	70.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.00%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M

Showing 1 to 10 of 69 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066903_1010812063	3300005764	Tropical Forest Soil	GIDDYMAGLENFVKSVTPGSLKETGALGDDRNALLMFTVEADYGSGKVTLANTRLYLLDEDHKITAEQVVYFATSR*
Ga0066903_1049854761	3300005764	Tropical Forest Soil	GIDDYMAGLENFVKSVTPGSLKETGALGDDRNALLMFTVEADYGNGKVTLASTRLYLLDEDHKITAEQVVYFVTS*
Ga0126373_122700502	3300010048	Tropical Forest Soil	DNAALAVTTTQAETPAVNTVVNATGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLANTRLYLLDEDHKITAEQVVYFVTS*
Ga0126373_124885891	3300010048	Tropical Forest Soil	EAPTVNTVVNTTGIDDYMAGLENFVKAVTPGSLKEIGALGDDRNALLMFTVEADYGSGKVTLANTRLYLLDEDHSITAEQVVYLATS*
Ga0126378_100760784	3300010361	Tropical Forest Soil	AGLENFVKAVTPGSLKEIGALGDGRNALLMFTVEADYGNGKVTLANTRLYLLDEDHKITAEQVVYFVTSR*
Ga0126378_113403412	3300010361	Tropical Forest Soil	VTTTQAETQTVNTVVNTTRIDDYMAGLENLVKSVTPGSFKEIGALGDGRNPLLMLTVEADYGAGKVRLASTRLYLLDEDHKITAEQVVYFVTS*
Ga0126381_1002533682	3300010376	Tropical Forest Soil	VTTTQAETQTVNTVVNTTRIDDYMAGLENLVKSVTPGSFKEIGALGDGRNPLLMLTVEADYGSGKVRLASTRLYLLDEDHKITAEQVVYFVTS*
Ga0126381_1046964011	3300010376	Tropical Forest Soil	MAGLESFVKAVTPGSLKEIGALGDDRNALLMFTVEADYGPGKVTLSNTRLYLLDEDHKITAEQVVYFATS*
Ga0126369_127994823	3300012971	Tropical Forest Soil	DDYMAGLENFVKAVTPGSLKEIGALGDDRNALLIFTVEADSRQGNVPLANTRLYLLDEDHKITAEQVVYFATS*
Ga0182041_119293011	3300016294	Soil	TGIADYMAGLENFVKSVTPGSFKEIGSLGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDHKITAEQVVYFVSS
Ga0182041_119330091	3300016294	Soil	ATLAVTTTQAETPAVNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKLTLANTRLYLLDDDHKITAEQVVYFVTSR
Ga0182034_108686131	3300016371	Soil	PAVNTVVNTTGIDDYMAGLENFVNSVTPGSFKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDHKITAEQVVSFVSS
Ga0182040_106982781	3300016387	Soil	LENFVQSVIPGSFREIAALGDDRNALLMFTVEADYGSAKVTLANTRLYLLDEDHMITAEQVVYFVSS
Ga0182037_110169291	3300016404	Soil	ENFVQSVIPGSFREIAALGDDRNALLMFTVEADNGSAKVTLANTRLYLLDVDHKITAEQVVYFVSS
Ga0182037_120186201	3300016404	Soil	LENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLANTRLYLLDEDHKITAEQVVYFVTSR
Ga0182039_114761522	3300016422	Soil	AALAVTTTQAETPAVNTVVNTTGIDDYMAGLESFVKSVTPGSFREIAALGDNRNALLMFTVEADYGSGRVTLASSRLYLLDEDRKITAEQVVYFVTS
Ga0182038_116164791	3300016445	Soil	ALNTVVNTTGINDYMAGLENLVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKLTLANTRLYLLDDDHKITAEQVVYFVTSR
Ga0126371_131070452	3300021560	Tropical Forest Soil	GIDDYMAGLENFVKSVTPGSLKQIGALGDDRNALLMFTVEADYGSGKVTLANTRLYLLDEDHKITAEQVVYFVTS
Ga0318516_102187083	3300031543	Soil	VVNTTGIDDYMAGLESFVKSVTPGSFREIAALGDNRNALLMFTVEADYGSGRVTLASSRLYLLDEDRKITAEQVVYFVTS
Ga0318534_101693701	3300031544	Soil	AVAGNATLAVTTTQAETPAVNTVVSTTGIDHYMAGLENFVQSVIPGSFREIAALGDDRNALLMFTVEADNGSAKVTLANTRLYLLDVDHKITAEQVVYFVSS
Ga0318534_107826261	3300031544	Soil	VNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSAKVTLANTRLYLLDEDHMITAEQVVYFVSS
Ga0318541_103077691	3300031545	Soil	AGNATLAVTTTQAETPAVNTVVSTTGIDHYMAGLENFVQSVIPGSFREIAALGDDRNALLMFTVEADNGSAKVTLANTRLYLLDVDHKITAEQVVYFVSS
Ga0318538_104789761	3300031546	Soil	TPAVNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDHKITAEQVIYFAAS
Ga0318573_102652122	3300031564	Soil	DYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLANTRLYLLDEDHKITAEQVVYFVTS
Ga0318515_101374051	3300031572	Soil	AARAVVAANATLAVTTTQAETPAVNTVVNTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0310915_101887933	3300031573	Soil	WSNHDLAAARAVVAGHATLAVTTTQAETPAVNTVVNTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTS
Ga0318555_102553051	3300031640	Soil	QVVAWRNHDLAAARAAVADNATLAVTTTQAETPAVNTVVSTTGIDDYMAGLENFVTAVTPGSFKEIAALGDDRNALLMFIVEAHYGPGTVTLANTRLYLLDDNHKITAEQVVYFVTS
Ga0318555_104102802	3300031640	Soil	IDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDHKITAEQVIYFAAS
Ga0318542_103187242	3300031668	Soil	YMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0318561_105625121	3300031679	Soil	AWSNHDLAAARAVVAANATLAVTTTQAETPAVNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKLTLANTRLYLLDDDHKITAEQVVYFVTSR
Ga0318574_107432261	3300031680	Soil	LHGGPRELTKAVTPGSFKEIAALGDNRNALLMFTVEADYGSGKVTLASTRLYLLDEDRKITAEQVVYFVSS
Ga0318572_100882923	3300031681	Soil	VNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLANTRLYLLDEDHKITAEQVVYFVTS
Ga0318572_107890722	3300031681	Soil	YMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSAKVTLANTRLYLLDEDHMITAEQVVYFVSS
Ga0318572_108600101	3300031681	Soil	FVNSVTPGSFKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDHKITAEQVVSFVSS
Ga0318560_102328171	3300031682	Soil	VTTTQAKTPAVNTVVNTIGIDDYMAGLKNFVKAVTPGSFKETGALGDDRNALLMFTVDADYGSGKVTLANTRLYLLDEDHKITAEQVVYFATS
Ga0318560_107825201	3300031682	Soil	LAVTTTQAETPAVNTVVNTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTS
Ga0318496_101830961	3300031713	Soil	DYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0306917_115234041	3300031719	Soil	VTTTQAETPAVNTVVSTTGIDHYMAGLENFVQSVIPGSFREIAALGDDRNALLMFTVEADNGSAKVTLANTRLYLLDVDHKITAEQVVYFVSS
Ga0318493_100555461	3300031723	Soil	LAVTTTQAETPAVNTVVSTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0318493_103760331	3300031723	Soil	RLHGGPRELTKAVTPGSFKEIAALGDNRNALLMFTVEADYGSGKVTLASTRLYLLDEDRKITAEQVVYFVSS
Ga0318500_101516892	3300031724	Soil	TGINDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSAKVTLANTRLYLLDEDHMITAEQVVYFVSS
Ga0318492_101810551	3300031748	Soil	DDYMAGLESFVKSVTPGSFREIAALGDNRNALLMFTVEADYGSGRVTLASSRLYLLDEDRKITAEQVVYFVTS
Ga0318494_101479351	3300031751	Soil	VAGNVTLAVTTTQAETPAVHTVVNTTGIDDYMAGLESFVKSVTPGSFREIAALGDNRNALLMFTVEADYGSGRVTLASSRLYLLDEDRKITAEQVVYFVTS
Ga0318494_102523271	3300031751	Soil	VTTTQTETPAVNTVVNTTGINDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKLTLANTRLYLLDDDHKITAEQVVYFVTSR
Ga0318535_102312921	3300031764	Soil	HYMAGLENFVQSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0318554_100367285	3300031765	Soil	FVQSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0318546_110158041	3300031771	Soil	VNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDHKITAEQVIYFAAS
Ga0318566_104890581	3300031779	Soil	HDLAAARAVVAANATLAVTTTQAETPAVNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKLTLANTRLYLLDDDHKITAEQVVYFVTSR
Ga0318552_106753002	3300031782	Soil	AETPAVNTVVSTTGIDDYMAGLENFVTAVTPGSFKEIAALGDDRNALLMFIVEAHYGPGTVTLANTRLYLLDDNHKITAEQVVYFVTS
Ga0318529_102084643	3300031792	Soil	NTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0318529_104650761	3300031792	Soil	TVVSTTGIDHYMAGLENFVQSVIPGSFREIAALGDDRNALLMFTVEADNGSAKVTLANTRLYLLDVDHKITAEQVVYFVSS
Ga0318548_100667271	3300031793	Soil	NTVVSTTGIDHYMAGLENFVQSVIPGSFREIAALGDDRNALLMFTVEADNGSAKVTLANTRLYLLDVDHKITAEQVVYFVSS
Ga0318523_102962191	3300031798	Soil	VTPGSFKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDRKITAEQVVYFVSS
Ga0318565_102670151	3300031799	Soil	VSAWVVVTAVNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLANTRLYLLDEDHKITAEQVVYFVTS
Ga0318497_100145621	3300031805	Soil	VVAGHATLAVTTTQAETPAVNTVVNTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEDHKITAEQVVYFVTS
Ga0318497_101930071	3300031805	Soil	MAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDHKITAEQVIYFAAS
Ga0318567_100704074	3300031821	Soil	IDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0318567_102220961	3300031821	Soil	TQAETPAVNTVVSTTGIDHYMAGLENFVQSVIPGSFREIAALGDDRNALLMFTVEADNGSAKVTLANTRLYLLDVDHKITAEQVVYFVSS
Ga0318567_103178011	3300031821	Soil	VTTTQAETPAVNTVVNTTGIEDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSAKVTLANTRLYLLDEDHKIMAEQVVYFVSS
Ga0318567_104197591	3300031821	Soil	ATLAVTTTQAETPAVNTVVSTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTS
Ga0318567_104445451	3300031821	Soil	VTTTQTETPAVNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEAEYGSAKVPLANTRLYLLDEDHMITAEQVVYFVSS
Ga0318567_107541101	3300031821	Soil	QAETPAVNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDHKITAEQVIYFAAS
Ga0318564_101670521	3300031831	Soil	LENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKLTLANTRLYLLDDDHKITAEQVVYFVTSR
Ga0318499_100750211	3300031832	Soil	IDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTS
Ga0318511_103655012	3300031845	Soil	TGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSAKVTLANTRLYLLDEDHMITAEQVVYFVSS
Ga0318512_101513902	3300031846	Soil	ATLAVTTTQAETPAVNTVVSTTGIDHYMAGLENFVQSVIPGSFREIAALGDDRNALLMFTVEADNGSAKVTLANTRLYLLDVDHKITAEQVVYFVSS
Ga0318495_102960832	3300031860	Soil	TQAETPAVNTVVNTTGIDDYMAGLESFVKSVTPGSFREIAALGDNRNALLMFTVEADYGSGRVTLASSRLYLLDEDRKITAEQVVYFVTS
Ga0306925_112962532	3300031890	Soil	NTVVNTTGINDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKLTLANTRLYLLDDDHKITAEQVVYFVTSR
Ga0318536_102564802	3300031893	Soil	ETPAVNTVVNTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0318520_107405582	3300031897	Soil	AGHATLAVTTTQAETPAVNTVVNTTGIDDYMAGLESFVKSVTPGSFREIAALGDNRNALLMFTVEADYGSGRVTLASSRLYLLDEDRKITAEQVVYFVTS
Ga0306923_117810741	3300031910	Soil	TTQAETPAVNTVVNTTGIDDYMAGLESFVKSVTPGSFREIAALGDNRNALLMFTVEADYGSGRVTLASSRLYLLDEDRKITAEQVVYFVTS
Ga0306921_102942984	3300031912	Soil	STTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0310913_103056981	3300031945	Soil	DHYMAGLESFVQSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0306926_119200281	3300031954	Soil	AKTPAVNTVVNTIGIDDYMAGLKNFVKAVTPGSFKETGALGDDRNALLMFTVDADYGSGKVTLANTRLYLLDEDHKITAEQVVYFATS
Ga0306922_101684381	3300032001	Soil	AGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDRKITAEQVVYFVSS
Ga0306922_109772021	3300032001	Soil	ENFVQSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0306922_111850472	3300032001	Soil	TTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSAKVTLANTRLYLLDEDHMITAEQVVYFVSS
Ga0306922_115882601	3300032001	Soil	AANATLAVTTTQAETPAVNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKLTLANTRLYLLDDDHKITAEQVVYFVTSR
Ga0318562_101671101	3300032008	Soil	GNATLAVTTTQAETPAVNTVVSTTGIDHYMAGLENFVQSVIPGSFREIAALGDDRNALLMFTVEADNGSAKVTLANTRLYLLDVDHKITAEQVVYFVSS
Ga0318562_106183301	3300032008	Soil	AWSNHDLAAARAVVAGHATLAVTTTQAETPAVNTVVSTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTS
Ga0318563_102071512	3300032009	Soil	AVTTTQAETPAVNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDHKITAEQVIYFAAS
Ga0318507_101528781	3300032025	Soil	VNTVVNTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTS
Ga0318507_103365701	3300032025	Soil	TLVNTTGIDDYMAGLENFVNSVTPGSFKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDHKITAEQVVSFVSS
Ga0318549_102133752	3300032041	Soil	TTTQAETPAVNTVVSTTGIDHYMAGLENFVQSVIPGSFREIAALGDDRNALLMFTVEADNGSAKVTLANTRLYLLDVDHKITAEQVVYFVSS
Ga0318558_101772241	3300032044	Soil	AARAVVAGHATLVVTTTQAETPAVNTVVSTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0318558_105875801	3300032044	Soil	SPMTLQKDSHAVQVARAQVEAWGNHDLAAAAGNATLVVTTTQAETPAVNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEAEYGSAKVPLANTRLYLLDEDHMITAEQVVYFVSS
Ga0318570_103572381	3300032054	Soil	MTLQKDSHAVQVARAQVEAWGNHDLAAAAGNATLVVTTTQAETPAVNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKLTLANTRLYLLDDDHKITAEQVVYFVTSR
Ga0318575_100352771	3300032055	Soil	SNHDLAAARAVVAGHATLAVTTTQAETPAVNTVVSTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0318533_105678131	3300032059	Soil	SHAVQVARAQVEAWGNHDLAAAAGNATLVVTTTQAETPAVNTVVNTTGIDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSAKVTLANTRLYLLDEDHMITAEQVVYFVSS
Ga0318513_100792481	3300032065	Soil	YMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDHKITAEQVVYFVTS
Ga0318513_101028593	3300032065	Soil	AVNTVVNTTGIDDYMAGLESFVKSVTPGSFREIAALGDNRNALLMFTVEADYGSGRVTLASSRLYLLDEDRKITAEQVVYFVTS
Ga0318553_104868221	3300032068	Soil	FVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKLTLANTRLYLLDDDHKITAEQAVYFVTSR
Ga0318553_107621461	3300032068	Soil	IDDYMAGLENFVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSAKVTLANTRLYLLDEDHMITAEQVVYFVSS
Ga0318525_102286931	3300032089	Soil	TVVSTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTC
Ga0318525_105113421	3300032089	Soil	TVVSTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTS
Ga0318518_105702231	3300032090	Soil	LAVTTTQAETPAVNTVVNTTGIDDYMAGLESFVKSVTPGSFREIAALGDNRNALLMFTVEADYGSGRVTLASSRLYLLDEDRKITAEQVVYFVTS
Ga0306920_1001615974	3300032261	Soil	TPAVNTVVSTTGIDDYMAGLESFVKSVIPGSFREIAALGDDRNALLMFTVEADYGSGKFTLASTRLYLLDEAHKITAEQVVYFVTS
Ga0306920_1010072741	3300032261	Soil	LAGPAAVTGHAALAVATTQAEPPAVNTVVNTTGIDDYMAGLENFVNSVTPGSFKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDHKITAEQVVSFVSS
Ga0306920_1015088671	3300032261	Soil	KSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLASTRLYLLDEDHKITAEQVIYFAAS
Ga0318519_106032441	3300033290	Soil	FVKSVTPGSLKEIAALGDDRNALLMFTVEADYGSGKVTLANTRLYLLDEDHKITAEQVVYFVTS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104203

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences