NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F104192

Metagenome Family F104192

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104192
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 63 residues
Representative Sequence MRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPR
Number of Associated Samples 73
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 1.00 %
Associated GOLD sequencing projects 67
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (99.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(59.000 % of family members)
Environment Ontology (ENVO) Unclassified
(86.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(61.000 % of family members)



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Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
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IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.
1Ga0062384_1001964073
2Ga0066388_1032929192
3Ga0066388_1071673111
4Ga0066903_1066080092
5Ga0126378_131564051
6Ga0126381_1008251751
7Ga0126381_1024028682
8Ga0164303_115187051
9Ga0182036_100830331
10Ga0182036_114639051
11Ga0182041_106047022
12Ga0182041_106899322
13Ga0182033_111762152
14Ga0182033_111869652
15Ga0182035_107671321
16Ga0182040_104680643
17Ga0182037_101260271
18Ga0182038_100746631
19Ga0182038_107438501
20Ga0210408_103132153
21Ga0187846_101230841
22Ga0207862_11536421
23Ga0170824_1242222881
24Ga0318516_102243291
25Ga0318534_105382291
26Ga0318541_105935371
27Ga0318573_100690921
28Ga0318515_107007261
29Ga0310915_112883031
30Ga0318555_107055522
31Ga0318555_107435742
32Ga0318542_101444921
33Ga0318542_101640161
34Ga0318542_102893822
35Ga0318572_101583013
36Ga0318572_103128432
37Ga0306917_105204911
38Ga0306917_110182201
39Ga0318500_100040141
40Ga0306918_101727924
41Ga0306918_105267851
42Ga0307475_108092383
43Ga0318537_103557211
44Ga0318554_102411583
45Ga0318521_102573223
46Ga0318543_101940331
47Ga0318498_102653562
48Ga0318566_102684652
49Ga0318547_103619811
50Ga0318557_100031416
51Ga0318576_102384771
52Ga0318576_103104902
53Ga0318576_103667881
54Ga0318497_101221403
55Ga0318568_105081971
56Ga0318567_100691473
57Ga0318499_101942991
58Ga0310917_103979262
59Ga0318511_104189121
60Ga0318536_100972864
61Ga0318551_109091041
62Ga0306923_109513092
63Ga0306923_114061071
64Ga0306923_122554522
65Ga0306921_112717312
66Ga0306921_121762321
67Ga0310916_100361981
68Ga0310916_112264292
69Ga0310913_102744111
70Ga0310910_103477671
71Ga0310909_100537741
72Ga0310909_102445021
73Ga0310909_108528702
74Ga0306926_105649773
75Ga0306926_113138792
76Ga0307479_111824112
77Ga0318531_101278093
78Ga0306922_102828203
79Ga0318569_104487513
80Ga0318569_105467121
81Ga0310911_106191231
82Ga0318559_103708761
83Ga0318549_101103323
84Ga0318556_103403323
85Ga0318556_104200722
86Ga0318558_105550922
87Ga0318532_100805391
88Ga0318575_105587071
89Ga0318533_102066163
90Ga0318505_105132231
91Ga0306924_103173514
92Ga0306924_115153601
93Ga0318525_107019932
94Ga0318518_100458901
95Ga0318577_100658641
96Ga0318577_101104671
97Ga0306920_1004362011
98Ga0306920_1005389611
99Ga0306920_1011995163
100Ga0318519_105314091
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 73.33%    β-sheet: 0.00%    Coil/Unstructured: 26.67%
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Variant

51015202530354045505560MRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSequenceα-helicesβ-strandsCoilSS Conf. score
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Gene Neighborhood

Neighboring Pfam domains




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Phylogeny

NCBI Taxonomy

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All Organisms
Unclassified
99.0%
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Associated Scaffolds





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Environmental Properties

Associated Habitat Types

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Visualization
Bog Forest Soil
Soil
Tropical Forest Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Tropical Forest Soil
Biofilm
3.0%59.0%28.0%4.0%
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Associated Samples


Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062384_10019640733300004082Bog Forest SoilMRMEDQATVADYLVLGTWEAITLIGEARERSDAASVSELLAKAEEILISIVSELPAL
Ga0066388_10329291923300005332Tropical Forest SoilMRIDDRTTVADFLVLGTWEALTLLGEARELCDADEVAELLSKAEQILISVVSELPGALPRSA
Ga0066388_10716731113300005332Tropical Forest SoilMRIDDRTTVADFLVLGTWEALTLLGEARELCDADEVAELLSKAEQILISVVSELPGALPRSAGRTIR
Ga0066903_10660800923300005764Tropical Forest SoilMRIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGAL
Ga0126378_1315640513300010361Tropical Forest SoilMGIDDQTTVADYLVLGAWEALTLLGEARELCDADEIGELLSKAEEILTSVVSELPGALSR
Ga0126381_10082517513300010376Tropical Forest SoilMGINDEITAADFLVLGTWEALTLLGEARELCDGGDVAELLSKAEEILISVVSELPG
Ga0126381_10240286823300010376Tropical Forest SoilMRIDDRTTVADFLVLGTWEALTLLGEARELCDADEVAELLSKAEQILI
Ga0164303_1151870513300012957SoilMGIDDQTTVADYLVLGTWEALTLLGEARELCDADEVVALLSKAEEILISVVS
Ga0182036_1008303313300016270SoilMQIDDQTTVADYLVLGTWEALTLLGEARELCDTDDVAELLSKAEEILFSVVSELLGALPRSAGRTIRGNGSGVSF
Ga0182036_1146390513300016270SoilMRIDDQTTVADYLVLGTWEALALLSEARELCDADDVAELLAKAEEILTSVVSELPGALPRSAG
Ga0182041_1060470223300016294SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLVKAEEILTSVVSELPGAL
Ga0182041_1068993223300016294SoilMEIDDQTTTADFLVLGTWEALTLLGEARELCDADDVAVLLSKAEEILISVVSELPGALPRSAGRTIRANGGVSFDA
Ga0182033_1117621523300016319SoilMRIDDRTTVADFLVLGTWEALTLLGEARELCDADEVAELLSKAEQILISVVSELPGALPR
Ga0182033_1118696523300016319SoilMRIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALP
Ga0182035_1076713213300016341SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLVKAEEILTSVVSE
Ga0182040_1046806433300016387SoilMRNDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILITVVSELPAALPRSASRTIR
Ga0182037_1012602713300016404SoilMRIDDQTTVADYLVLGTWEALTLLSEARELCDADDVAELLVKAEEILTSVVSELPGALPRSAG
Ga0182038_1007466313300016445SoilMRIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVV
Ga0182038_1074385013300016445SoilMGIDDHTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGAL
Ga0210408_1031321533300021178SoilMPIDDQTTVTDFLVLGTWEALTLLGEARELCDAEDVAELLSKAEEILISVVSELPGALPRSAGRTIRAN
Ga0187846_1012308413300021476BiofilmMGIDDQTTTADFLVLGTWEALTLLGEARELCDADDVAALLSKAEEILISVVSELPGALPRSAGRIIRANGGA
Ga0207862_115364213300027703Tropical Forest SoilMRIDDQTTVADYLVLGTWEAITLLGEARESCDTAEVSELLAKAETILISVVSELPGALPRSASRKIRANGGTAFGD
Ga0170824_12422228813300031231Forest SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADEVAELLSKAEEILTSVVSE
Ga0318516_1022432913300031543SoilMEIDDQTTTADFLVLGTWEALTLLGEARELCDADDVAVLLSKAEEILISVVSELPGA
Ga0318534_1053822913300031544SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLVKAEEILTSVV
Ga0318541_1059353713300031545SoilMGIDDHTTAADFLVLGTWEALTLLGEARELCDADDVAELL
Ga0318573_1006909213300031564SoilMEIDDQTTTADFLVLGTWEALTLLGEARELCDADDVAVLLSKAEEILISVVSELPGALPR
Ga0318515_1070072613300031572SoilMEIDDHTTAADFLVLGTWEALTLLGEARDLCDADDVAELIAKAEEILISVVSELPGVLPRSVGRTICQN
Ga0310915_1128830313300031573SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLVKAEEILTSVVSELPGALPRSAGRIIRRNGGASLGRAI
Ga0318555_1070555223300031640SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLVKAEEILTSVVSELPGALPRSAGRIIRRNGGA
Ga0318555_1074357423300031640SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEIL
Ga0318542_1014449213300031668SoilMRNDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILITVVSELPAALPRSAGR
Ga0318542_1016401613300031668SoilMGIDDQTTTADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSAGRTIRANGGASFDEPD
Ga0318542_1028938223300031668SoilMRIDDQTTVTDYLVLGTWEALTLLGEARELCDTDDVAELLSKAEEILISVVSELPGALPR
Ga0318572_1015830133300031681SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAQIGGPHYSR
Ga0318572_1031284323300031681SoilMEIDDHTTAADFLVLGTWEALTLLGEARELCDADDVAELIAKAEEILI
Ga0306917_1052049113300031719SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVV
Ga0306917_1101822013300031719SoilMRIDDQTTVADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPR
Ga0318500_1000401413300031724SoilMGIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVLELPGALPRSAGRTIHANGGIS
Ga0306918_1017279243300031744SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLVKAEEILTSVVSELPGALPRSAGRII
Ga0306918_1052678513300031744SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSAGRTIRANG
Ga0307475_1080923833300031754Hardwood Forest SoilMPIDDQTTVTDFLVLGTWEALTLLGEARELCDAEDVAELLSKAEEILISVVSELPGALPRSAGRTI
Ga0318537_1035572113300031763SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLVKAEEILTSVVSELPGALPRSAGRIIRRNGGAS
Ga0318554_1024115833300031765SoilMGIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVLELPGALPRSA
Ga0318521_1025732233300031770SoilMRIDDQTTVADYLVLGTWEALTLLSEARELCDADDVAELLVKAEEILTSVVSE
Ga0318543_1019403313300031777SoilMGIDDHTTAADFLVLGTWEALTLLGEARDLCDADDVAELIAKAEEILISVVS
Ga0318498_1026535623300031778SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLVKAEEILTSVVSELPGALPRSAGRIIRR
Ga0318566_1026846523300031779SoilMGIDDHTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILVSVVSELPGALPRSMG
Ga0318547_1036198113300031781SoilMGIDDQTTTDDFLVLGTWESLTLLGEARELCDADDVAELLSKAEEILISVVSELPGAL
Ga0318557_1000314163300031795SoilMGIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVLELPGALPRSAGRTIHA
Ga0318576_1023847713300031796SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLVKAEEILTSVVSELPGALPRSAGRIIRRN
Ga0318576_1031049023300031796SoilMEIDDQTTTADFLVLGTWEALTLLGEARELCDADDVAVLLSKAEEILISVVSELPGALPRSAGRTIRANGGV
Ga0318576_1036678813300031796SoilMRNDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILITVVSELPAALPRSAGRTIRANGGASFDKA
Ga0318497_1012214033300031805SoilMGIDDHTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILVSVVSELP
Ga0318568_1050819713300031819SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPR
Ga0318567_1006914733300031821SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSE
Ga0318499_1019429913300031832SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSAGRTIRGNGSGVS
Ga0310917_1039792623300031833SoilMGIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEIFISVVSELPGALPRSAGRTIRANGG
Ga0318511_1041891213300031845SoilMRIDDQTTVADYLVLGTWEALSLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSAGRTIRA
Ga0318536_1009728643300031893SoilMGIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVV
Ga0318551_1090910413300031896SoilMRIDDRTTVADFLVLGTWEALTLLGEARELCDADEVAELLSKAEQILISVVSELPGALPRSAG
Ga0306923_1095130923300031910SoilMRIDDQTTVADYLVLGTWEALALLSEARELCDADDVAELLAKAEEILTSVVSELPGALPR
Ga0306923_1140610713300031910SoilMRIDDQTTVADFLVLGTWEALTLLGEARERCDADDVAELLSKAEEILISVVSELPGALPRSAGRTIR
Ga0306923_1225545223300031910SoilMQIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSAGRTIRANGGGVAFGEA
Ga0306921_1127173123300031912SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSAGRTIRANGGASFG
Ga0306921_1217623213300031912SoilMRIDDQTTVADYLVLGTWEALTLLSEARELCDADDVAELLAKAEEILTSVVLGVAGSIAALGGPGYSP
Ga0310916_1003619813300031942SoilMEIDDHTTAADFLVLGTWEALTLLGEARDLCDADDVAELIAKAEEILISVVSELPGVLPRSVGRTI
Ga0310916_1122642923300031942SoilMRNDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILITVVSELPAALPRSAGRTIRANGGASFDE
Ga0310913_1027441113300031945SoilMRIDDRTTVADFLVLGTWEALTLLGEARELCDADEVAELLSKAEQILISVVSELPGA
Ga0310910_1034776713300031946SoilMEIDDQTTTADFLVLGTWEALTLLGEARELCDADDVAVLLSKAEEILISVVSELPGALPRSAG
Ga0310909_1005377413300031947SoilMEIDDHTTAADFLVLGTWEALTLLGEARDLCDADDVAELIAKAEEILISVVSELPGVLPRSVGRTICQNGGAA
Ga0310909_1024450213300031947SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLVKAEEILTSVVSELPGALPRSAGRIIRRNGG
Ga0310909_1085287023300031947SoilMPIDDQTTVTDFLVLGTWEALTLLGEARELCDAEDVAELLSKAEEILISVVSELPGALPRSAGRTIRHNGRASFDE
Ga0306926_1056497733300031954SoilMRIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSAGRTIR
Ga0306926_1131387923300031954SoilMRNDDQTTVADYLVLGTWEAITLLGEARERCDLADVSELLSKVETLLIAVVSELPGALPRSVGRTIR
Ga0307479_1118241123300031962Hardwood Forest SoilMGIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPG
Ga0318531_1012780933300031981SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLVKAEEILTSVVSELPGALPRSAGRIIRRNG
Ga0306922_1028282033300032001SoilMEIDDHTTAADFLVLGTWEALTLLGEARELCDADDVAELIVKAEEILISV
Ga0318569_1044875133300032010SoilMRIDDQTTVADYLVLGTWEALSLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSA
Ga0318569_1054671213300032010SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSAGRTIRANGGASFGGSSA
Ga0310911_1061912313300032035SoilMEIDDHTTAADFLVLGTWEALTLLGEARDLCDADDVAELIAKAEEILISVV
Ga0318559_1037087613300032039SoilMRNDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILIS
Ga0318549_1011033233300032041SoilMPIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILTSVVSELPGALPRSAGRTIRANGASFDEASAG
Ga0318556_1034033233300032043SoilMEIDDQTTTADFLVLGTWEALTLLGEARELCDADDVAVLLSKAEEILISVVSELPGALPRSAGRTIR
Ga0318556_1042007223300032043SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILITVVSELPAALPRSASRTIRANGG
Ga0318558_1055509223300032044SoilMRIDDQTTVADYLVLGTWEALTLLSEARELCDADDVAELLVKAEEILTSVVSELPAALPRSAE
Ga0318532_1008053913300032051SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPG
Ga0318575_1055870713300032055SoilMGIDDHTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILV
Ga0318533_1020661633300032059SoilMRIDDQTTVADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILSSVVSELPGALPRSAGRTIR
Ga0318505_1051322313300032060SoilMRNDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILIT
Ga0306924_1031735143300032076SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSAGRTIRANGGASFGGSS
Ga0306924_1151536013300032076SoilMRIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISV
Ga0318525_1070199323300032089SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSAGRTIRA
Ga0318518_1004589013300032090SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILITVVSELPAALPRSASRTIR
Ga0318577_1006586413300032091SoilMPIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILTSVVS
Ga0318577_1011046713300032091SoilMGIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISV
Ga0306920_10043620113300032261SoilMRIDDQTTVADYLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSAGRTIRANGGASFGG
Ga0306920_10053896113300032261SoilMRIDDQTTVADYLVLGTWEALALLSEARELCDADDVAELLAKAEEILTSVVLGVAGSIAALGG
Ga0306920_10119951633300032261SoilMGIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSAGRTI
Ga0318519_1053140913300033290SoilMRIDDQTTAADFLVLGTWEALTLLGEARELCDADDVAELLSKAEEILISVVSELPGALPRSAGRTIRA


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