NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F103943

Metagenome / Metatranscriptome Family F103943

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103943
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 114 residues
Representative Sequence QYTADVCRSDNGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGSGGSTFMQPTGAGSTNGLNLTSPLVIAGSAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP
Number of Associated Samples 85
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.98 %
% of genes near scaffold ends (potentially truncated) 96.04 %
% of genes from short scaffolds (< 2000 bps) 88.12 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (71.287 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(11.881 % of family members)
Environment Ontology (ENVO) Unclassified
(74.257 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(71.287 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.14%    β-sheet: 21.43%    Coil/Unstructured: 76.43%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF01161PBP 23.76
PF02518HATPase_c 13.86
PF00480ROK 9.90
PF07021MetW 6.93
PF00326Peptidase_S9 2.97
PF01575MaoC_dehydratas 1.98
PF085212CSK_N 1.98
PF00596Aldolase_II 0.99
PF13561adh_short_C2 0.99
PF04055Radical_SAM 0.99
PF00015MCPsignal 0.99
PF03709OKR_DC_1_N 0.99
PF08352oligo_HPY 0.99
PF13602ADH_zinc_N_2 0.99
PF06243PaaB 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG1881Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) familyGeneral function prediction only [R] 23.76
COG1940Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domainTranscription [K] 19.80
COG0642Signal transduction histidine kinaseSignal transduction mechanisms [T] 1.98
COG0840Methyl-accepting chemotaxis protein (MCP)Signal transduction mechanisms [T] 1.98
COG34601,2-phenylacetyl-CoA epoxidase, PaaB subunitSecondary metabolites biosynthesis, transport and catabolism [Q] 0.99

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.26 %
UnclassifiedrootN/A25.74 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_108854941All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300003369|JGI24140J50213_10259765All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300004479|Ga0062595_101976769Not Available562Open in IMG/M
3300004643|Ga0062591_100693619All Organisms → cellular organisms → Bacteria → Proteobacteria919Open in IMG/M
3300005163|Ga0066823_10079048All Organisms → cellular organisms → Bacteria → Proteobacteria643Open in IMG/M
3300005168|Ga0066809_10238691Not Available503Open in IMG/M
3300005327|Ga0070658_11791870All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria531Open in IMG/M
3300005328|Ga0070676_10067147All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium2144Open in IMG/M
3300005329|Ga0070683_100849411All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales875Open in IMG/M
3300005329|Ga0070683_101669885Not Available612Open in IMG/M
3300005333|Ga0070677_10014905All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2746Open in IMG/M
3300005333|Ga0070677_10593925All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300005335|Ga0070666_11014026Not Available616Open in IMG/M
3300005338|Ga0068868_101079776All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300005338|Ga0068868_102169733Not Available529Open in IMG/M
3300005339|Ga0070660_101002056All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300005339|Ga0070660_101296934All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria618Open in IMG/M
3300005353|Ga0070669_100321744Not Available1249Open in IMG/M
3300005355|Ga0070671_101248485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria655Open in IMG/M
3300005364|Ga0070673_101293275All Organisms → cellular organisms → Bacteria → Proteobacteria685Open in IMG/M
3300005455|Ga0070663_100387493All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1139Open in IMG/M
3300005466|Ga0070685_10516101All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300005543|Ga0070672_101204975All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300005564|Ga0070664_101050148All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300005564|Ga0070664_101825700All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium577Open in IMG/M
3300005566|Ga0066693_10372610All Organisms → cellular organisms → Bacteria → Proteobacteria577Open in IMG/M
3300005578|Ga0068854_100042289All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3225Open in IMG/M
3300005616|Ga0068852_102749659Not Available511Open in IMG/M
3300005617|Ga0068859_102066931All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae → Ephemera → Ephemera danica629Open in IMG/M
3300005618|Ga0068864_101123225All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300005834|Ga0068851_10729072All Organisms → cellular organisms → Bacteria → Proteobacteria612Open in IMG/M
3300005840|Ga0068870_10002026All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax8380Open in IMG/M
3300005840|Ga0068870_10700201All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae → Ephemera → Ephemera danica699Open in IMG/M
3300005840|Ga0068870_10991209All Organisms → cellular organisms → Bacteria → Proteobacteria599Open in IMG/M
3300005843|Ga0068860_100521287All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1188Open in IMG/M
3300006046|Ga0066652_101913409All Organisms → cellular organisms → Bacteria → Proteobacteria532Open in IMG/M
3300006050|Ga0075028_100933289Not Available536Open in IMG/M
3300006163|Ga0070715_10681362All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria612Open in IMG/M
3300006237|Ga0097621_100371684All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1275Open in IMG/M
3300006642|Ga0075521_10029890All Organisms → cellular organisms → Bacteria2285Open in IMG/M
3300006854|Ga0075425_100683931All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1178Open in IMG/M
3300006881|Ga0068865_100173965All Organisms → cellular organisms → Bacteria1653Open in IMG/M
3300006881|Ga0068865_100469980All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1043Open in IMG/M
3300006953|Ga0074063_11956591All Organisms → cellular organisms → Bacteria → Proteobacteria563Open in IMG/M
3300009098|Ga0105245_10130235All Organisms → cellular organisms → Bacteria → Proteobacteria2359Open in IMG/M
3300009098|Ga0105245_10425986All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter1331Open in IMG/M
3300009148|Ga0105243_10549882All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1103Open in IMG/M
3300009174|Ga0105241_10066804All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4042782Open in IMG/M
3300009174|Ga0105241_12627745Not Available506Open in IMG/M
3300009545|Ga0105237_10139534All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4042418Open in IMG/M
3300010375|Ga0105239_10462898All Organisms → cellular organisms → Bacteria1439Open in IMG/M
3300010397|Ga0134124_12860972Not Available526Open in IMG/M
3300011106|Ga0151489_1345394All Organisms → cellular organisms → Bacteria → Proteobacteria965Open in IMG/M
3300012955|Ga0164298_11528053Not Available522Open in IMG/M
3300012961|Ga0164302_11053807All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia638Open in IMG/M
3300013105|Ga0157369_10656531All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1081Open in IMG/M
3300013296|Ga0157374_10085548All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2999Open in IMG/M
3300013306|Ga0163162_10267016All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1843Open in IMG/M
3300014745|Ga0157377_11731772Not Available505Open in IMG/M
3300015191|Ga0167659_1041100All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales929Open in IMG/M
3300015242|Ga0137412_10526881All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300020034|Ga0193753_10162000Not Available1056Open in IMG/M
3300024055|Ga0247794_10148275All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales731Open in IMG/M
3300024055|Ga0247794_10357214All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Acidiferrobacter → Acidiferrobacter thiooxydans501Open in IMG/M
3300025316|Ga0209697_10260310All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae931Open in IMG/M
3300025321|Ga0207656_10661487Not Available534Open in IMG/M
3300025878|Ga0209584_10349620Not Available570Open in IMG/M
3300025893|Ga0207682_10362797All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300025903|Ga0207680_11079960Not Available574Open in IMG/M
3300025907|Ga0207645_10016806All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae4838Open in IMG/M
3300025907|Ga0207645_10694699All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae → Ephemera → Ephemera danica691Open in IMG/M
3300025909|Ga0207705_11058323All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria626Open in IMG/M
3300025914|Ga0207671_11528174Not Available515Open in IMG/M
3300025919|Ga0207657_11227773Not Available569Open in IMG/M
3300025923|Ga0207681_10325149Not Available1224Open in IMG/M
3300025925|Ga0207650_10493058All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300025925|Ga0207650_11704326All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium534Open in IMG/M
3300025926|Ga0207659_11163346All Organisms → cellular organisms → Bacteria → Proteobacteria663Open in IMG/M
3300025926|Ga0207659_11266963All Organisms → cellular organisms → Bacteria → Proteobacteria633Open in IMG/M
3300025926|Ga0207659_11327592All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria617Open in IMG/M
3300025931|Ga0207644_10227539Not Available1481Open in IMG/M
3300025931|Ga0207644_10749337All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales816Open in IMG/M
3300025938|Ga0207704_11189261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria650Open in IMG/M
3300025940|Ga0207691_10072948All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3096Open in IMG/M
3300025942|Ga0207689_10232174All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1525Open in IMG/M
3300025945|Ga0207679_12050640Not Available520Open in IMG/M
3300025949|Ga0207667_11209980All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes735Open in IMG/M
3300025972|Ga0207668_10387113Not Available1179Open in IMG/M
3300025981|Ga0207640_10019111All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales4041Open in IMG/M
3300025986|Ga0207658_11644748Not Available587Open in IMG/M
3300026023|Ga0207677_10204061All Organisms → cellular organisms → Bacteria1573Open in IMG/M
3300026041|Ga0207639_10555055All Organisms → cellular organisms → Bacteria → Proteobacteria1055Open in IMG/M
3300026294|Ga0209839_10205407Not Available631Open in IMG/M
3300027911|Ga0209698_10190232All Organisms → cellular organisms → Bacteria1665Open in IMG/M
3300028786|Ga0307517_10548926Not Available578Open in IMG/M
3300028802|Ga0307503_10107001All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1202Open in IMG/M
3300031939|Ga0308174_10953921All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium726Open in IMG/M
3300032005|Ga0307411_10914121Not Available780Open in IMG/M
3300032074|Ga0308173_11097622All Organisms → cellular organisms → Bacteria → Proteobacteria741Open in IMG/M
3300032174|Ga0307470_11535347All Organisms → cellular organisms → Bacteria → Proteobacteria555Open in IMG/M
3300033179|Ga0307507_10512467All Organisms → cellular organisms → Bacteria643Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere11.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere10.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere9.90%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere8.91%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere6.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere4.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.96%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.97%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.98%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.98%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion0.99%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.99%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.99%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.99%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.99%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.99%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.99%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300003369Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22AEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006642Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-DEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015191Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-10 : a,b,c samples pooled, hydrological sediment from glacier outflow)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025316Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025878Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028786Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EMHost-AssociatedOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033179Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EMHost-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10885494123300000955SoilAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGTGGATFMQPTGPTSTNGLNLTSPLVIAGTARSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
JGI24140J50213_1025976513300003369Arctic Peat SoilAPTACNGTDAAPVSDAVYLYLTTNPSAGTGGNTFMQPTDPSSTNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFEKLP*
Ga0062595_10197676913300004479SoilATYSCVIIKMSDLIKFTPRASSGLCAAGTQYTADVCRSDNGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGTGGGSTFMQPTGATSTNGLNLTSPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0062591_10069361923300004643SoilFTPRTSAGLCVAGTQYVADVCRTDNGGTTQAPDAIGAPTACMGTDAAPVSDAVYLYLTTNASAGTGGSTFMPPTDASSTNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFEKLP*
Ga0066823_1007904813300005163SoilDAVGAPSACAGTDAAPVSDAVHLYLTTNASAGTGGNTFMQPTGPASTNGLNLTAPLVIAGAAKSKFVVNATGKVGDDGVACGMNPPVFGFQKLP*
Ga0066809_1023869113300005168SoilYHCVIIKMSDLIKFTPSATAGLCSASVQYTADVCRTDNGGITQAPDAVGAPNACAGTDAAPVSDAVHLYLTTNASAGTGGNTFMQPTGPASTNGLNLTAPLVIAGAAKSKFVVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0070658_1179187013300005327Corn RhizosphereADVCRSDNGGTTQAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGNGGATFMQPDSSVSGNGLNLTAPLVLAGMARSKFVVNATGKVGSDSVGCGMNPPVFGFQKLP*
Ga0070676_1006714733300005328Miscanthus RhizosphereVADVCRSDNSGTTQAPDSSARTACTGTDAAPHSDAVYMYLTTNASAGTGGEVFLQPTDVNSGYGLHLTAPLVIAGKAKSKFVVNATGKVGSDSVSCGMNPPVFGFQKVQ*
Ga0070683_10084941123300005329Corn RhizosphereGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGTGGSTFMQPTGPTSGNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0070683_10166988523300005329Corn RhizosphereGTQYTADVCRSDNGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGSGGSTFMQPTGAGSTNGLNLTSPLVIAGSAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0070677_1001490533300005333Miscanthus RhizosphereTQYTADVCRSDNGGTTQAPDAVGAPNACSGTDAAPVADTVHLYLTTNASAGTGGNTFMQPTGPASTNGLNLTAPLVIAGAAKSKFIVNATGKVGDDGVSCGMNPPVFGFEKLP*
Ga0070677_1059392513300005333Miscanthus RhizosphereYVADVCRTDNGGTTHAPDAAGNVTSCTGTDAVPQSDAVYMYLTTNASAGTGGGTFTQPTSVNSTSGLHLTAPLVISGSAKSKFVVNATGKVSGADVSCGMNPPVFGFKPVP*
Ga0070666_1101402623300005335Switchgrass RhizosphereCVIIRMSDLIKFTPSASSGLCVAGTQYTADVCRSDNGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGSGGSTFMQPTGAGSTNGLNLTSPLVIAGSAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0068868_10107977613300005338Miscanthus RhizosphereTQYTADVCRSDNVGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGTGGSTFMQPTGPTSGNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0068868_10216973313300005338Miscanthus RhizosphereDSRLVHGWHPVHRGRLRADNGGTTQAPDVLGAPSACSGTDAAPVSDAVHLYLTTNPAAGSGGNTFLQPTDATSTNGLHLTAPLVIAGTAKSKFVVNATGKVGSDSIGCGMNPPVFGFQKLP*
Ga0070660_10100205613300005339Corn RhizosphereRSDNGGTTQAPDAVGAPNACSGTDGAPVADTVYLYLTTNATAGTGGDTFMQPTGAGSSNGLNLASPLVIAGNARSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0070660_10129693423300005339Corn RhizosphereQAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGNGGAAFMQPDSSVSGNGLNLTAPLVLAGMARSKFVVNATGKVGSDSVGCGMNPPVFGFQKLP*
Ga0070669_10032174423300005353Switchgrass RhizosphereCRSDNGGTTQAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGNGGATFMQPDSSVSGNGLNLTAPLVLAGMARSKFVVNATGKVGSDSVGCGMNPPVFGFQKLP*
Ga0070671_10124848513300005355Switchgrass RhizosphereDGTYHCVVIKMSDLIKFTPSASAGLCMAGTQYTADVCRSDNGGTTQAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGSGGATFMQPDSTVSGNGLNLTAPLVLAGMARSKFVVNATGKVGSDSVGCGMNPPVFGFQKLP*
Ga0070673_10129327523300005364Switchgrass RhizosphereGTYHCVVIKMSDLIKSTPSTTAGRCNASVQYTADVCRSDNGGTTQAPDAVGAPSACAGTDAAPVSDAVYLYLTTNASAGGGGNTFMQPTDPTSTNGLNLTAPLVIAGSAKSKFVVNAAGKVGDDGVSCGMNPPVFGFQKLP*
Ga0070663_10038749323300005455Corn RhizosphereQYTADVCRSDNGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGSGGSTFMQPTGAGSTNGLNLTSPLVIAGSAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0070685_1051610133300005466Switchgrass RhizospherePDAAGATTVCTGTDAVPHADAVYLYLTTNASAGTGGQTFVQPTSFSSTSGLHLTAPLTIAGTAKSKFVVNASGKVSGADSSCGMNPPVFGFVPVP*
Ga0070672_10120497513300005543Miscanthus RhizosphereMSDLIKFTPSTTAGLCSASVQYTADVCRSDNGGTTQSPDAVGAPSACAGTDAAPVSDAVYLYLTTNASAGSGGNTFMQPTGPTSTNGLNLTAPLVIAGTAKSKFVVNAAGKVGDDGFSCGMNPPVFGFQKLP*
Ga0070664_10105014813300005564Corn RhizosphereDATYNCVVIKMSDLIKFTPSASSGLCTAGTQYTADVCRSDNVGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGTGGSTFMQPTGPTSGNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0070664_10182570023300005564Corn RhizosphereQYTADVCRSDNGGTTQAPDAVGAPNACSGTDAAPVADTVHLYLTTNASAGTGGNTFMQPTGPASTNGLNLTAPLVIAGAAKSKFIVNATGKVGDDGVACGMNPPLFGFQKLP*
Ga0066693_1037261013300005566SoilCSASVQYTADVCRTDNGGTTQAPDAVGAASACNGIDAAPVADTVYLYLTTNASAGSGGKTFMQPTGASSTNGLHLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0068854_10004228933300005578Corn RhizospherePDPVGAPTACTGTDAAPVSDAVHLYLTTNASAGTGGNTFMPPTDASSTNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFEKLP*
Ga0068852_10274965913300005616Corn RhizosphereIKMSDLIKFTPSSSAGLCTAGTQYTADVCRSDNGGMTQAPDAVGAPSVCSGTDAAPVSNAVYLYLTTNSSAGKGGNTFMQPTGPSSTDGLNLTAPLIIAGSAKSKFVVNATGKVGDDGIACGMNPPVFGFQKLP*
Ga0068859_10206693113300005617Switchgrass RhizosphereSSTRTACTGTDAAPHSDAVYMYLTTNASAGTGGEVFLQPTDVDSGYGLHLTAPLVIAGKAKSKFVVNATGKVGSDSVSCGMNPPVFGFQKVQ*
Ga0068864_10112322523300005618Switchgrass RhizosphereIKFTPSASSGLCTAGTQYTADVCRSDNVGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGTGGSTFMQPTGPTSGNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0068851_1072907213300005834Corn RhizosphereQYVADVCRTDNGGTTQAPDAIGAPTACMGTDAAPVSDAVYLYLTTNASAGTGGSTFMPPTDASSTNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFEKLP*
Ga0068870_1000202613300005840Miscanthus RhizosphereVTSCTGTDAAPQSDAVYMYLTTNASAGTGGGTFTQPTSVNSTSGLHLTAPLVISGSAKSKFVVNATGKVSGADVSCGMNPPVFGFKPVP*
Ga0068870_1070020113300005840Miscanthus RhizosphereAPDSSARTACTGTDAAPHSDAVYMYLTTNASAGTGGEVFLQPTDVNSGYGLHLTAPLVIAGKAKSKFVVNATGKVGSDSVSCGMNPPVFGFQKVQ*
Ga0068870_1099120923300005840Miscanthus RhizosphereTTQAPDAAGVPSTCTGTDAAPVSDAVYLYLTTNATAGSGGGSTFLQPTGPSSTNGLNLTAPLVVAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFKKLP*
Ga0068860_10052128723300005843Switchgrass RhizosphereFTPSASSGLCTAGTQYTADVCRSDYGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGSGGSTFMQPTGAGSTNGLNLTSPLVIAGSAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0066652_10191340923300006046SoilNGGTTQAPDAVGAASACNGIDAAPVADTVYLYLTTNASAGSGGKTFMQPTGASSTNGLHLTAPLVIAGTAKSKFIVNATGKVGDDGISCGMNPPVFGFQKLP*
Ga0075028_10093328913300006050WatershedsVADICRADNNGTTQAPDAAGAPTVCTGTDSAPRADAVYLYLTTNSSAGSGGNTFSQPTGTQSTYGLNLTAPLVISGNAKSKFVVNATGKVVGDYTTCGMNPPIFGFQKLP*
Ga0070715_1068136223300006163Corn, Switchgrass And Miscanthus RhizosphereCVIIKMSDLIKFTPSTTAGLCSASVQYTADVCRTDNSGTTQAPDAVGAPNACSGTDAAPVSDAVYLYLTTNASAGSGGNTFMQPTGATSTNGLNLTAPLVIAGAAKSKFVVNATGKVGDDGISCGMNPPVFGFQKLP*
Ga0097621_10037168413300006237Miscanthus RhizosphereGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGSGGSTFMQPTGAGSTNGLNLTSPLVIAGSAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0075521_1002989013300006642Arctic Peat SoilPPDATYNCVIIKMSDLIKFTPSSTSGLCMGGTQYTADVCRTDNGGTTQAPDAAGAPTTCNGTDAAPVSDAVYLYLTTNASAGTGGNTFMQPTGPSSTNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0075425_10068393113300006854Populus RhizosphereGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGSGGSTFMQPTGAGSTNGLNLTSPLVIAGSAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0068865_10017396513300006881Miscanthus RhizosphereSCAAGTEYVADVCRTDNGGTTHAPDAAGNVTSCTGTDAVPQSDAVYMYLTTNASAGTGGGTFTQPTSVNSTSGLHLTAPLVISGSAKSKFVVNATGKVSGADVSCGMNPPVFGFKPVP*
Ga0068865_10046998013300006881Miscanthus RhizosphereDLIKFTPSASSGLCTAGTQYTADVCRSDNGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGSGGSTFMQPTGAGSTNGLNLTSPLVIAGSAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0074063_1195659123300006953SoilGAPSACAGTDAAPVSDAVHLYLTTNASAGTGGNTFMQPTGPASTNGLNLTAPLVIAGAAKSKFVVNATGKVGDDGVGCGMNPPLFGFQKLP*
Ga0105245_1013023513300009098Miscanthus RhizosphereDAAGNVTSCTGTDAVPQSDAVYMYLTTNASAGTGGGTFTQPTSVNSTSGLHLTAPLVISGSAKSKFVVNATGKVSGADVSCGMNPPVFGFKPVP*
Ga0105245_1042598613300009098Miscanthus RhizosphereTEYVADVCRSDNSGTTQAPDSSARTACTGTDAAPHSDAVYMYLTTNASAGTGGEVFLQPTDVNSGYGLHLTAPLVIAGKAKSKFVVNATGKVGSDSVSCGMNPPVFGFQKVQ*
Ga0105243_1054988233300009148Miscanthus RhizosphereSGLCTVGTEYVADVCRSDNSGTTQAPDSSARTACTGTDAAPHSDAVYMYLTTNASAGTGGEVFLQPTDVNSGYGLHLTAPLVIAGKAKSKFVVNATGKVGSDSVSCGMNPPVFGFQKVQ*
Ga0105241_1006680443300009174Corn RhizosphereSSARTACTGTDAAPHSDAVYMYLTTNASAGTGGEVFLQPTDVDSGYGLHLTAPLVIAGKAKSKFVVNATGKVGSDSVSCGMNPPVFGFQKVQ*
Ga0105241_1262774513300009174Corn RhizosphereLIKFTPSASSGLCTAGTQYTADVCRSDNGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGSGGSTFMQPTGAGSTNGLNLTSPLVIAGSAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0105237_1013953413300009545Corn RhizosphereDAAGATTVCTGTDAVPHADAVYLYLTTNASAGTGGQTFVQPTSFSSTSGLHLTAPLTIAGTAKSKFVVNASGKVSGADSSCGMNPPVFGFVPVP*
Ga0105239_1046289813300010375Corn RhizosphereDAAGNVTSCTGTDAAPQSDAVYMYLTTNASAGTGGGTFTQPTSENSTSGLHLTAPLVISGSAKSKFVVNATGKVSGADVSCGMNPPVFGFKPVP*
Ga0134124_1286097213300010397Terrestrial SoilPDAVGAPNACSGTDGAPVADTVYLYLTTNATAGTGGDTFMQPTGAGSSNGLNLASPLVIAGNARSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0151489_134539423300011106SoilGAPSACAGTDAAPVSDAVHLYLTTNASAGTGGNTFMQPTGPASTNGLNLSAPLVIAGSAKSKFVVNATGKVGDDGVGCGMNPPLFGFQKLP*
Ga0164298_1152805323300012955SoilAGLSSASVQYTADVCRTDNGGTTQAPDAVGAPNACRGTDAAPVSDTVHMYLTTNASAGAGGNTFMQPTGPSSTNGLNLTAPLVIAGAAKSKFVVNATGKVGDDGVGCGMNPPMFGFQKLP
Ga0164302_1105380713300012961SoilNGGMTQAPDAVGAPTLCTGTDAAPVSDAVYLYLTTNASAGTGGNTFMQPTGPSSTNGLNLTAPLVIAGAAKSKFVVNATGKVGDDGVGCGMNPPMFGFQKLP*
Ga0157369_1065653113300013105Corn RhizospherePSASSGLCTAGTQYTADVCRSDNGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGSGGSTFMQPTGAGSTNGLNLTSPLVIAGSAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0157374_1008554853300013296Miscanthus RhizosphereIKFTPSASSGLCTAGTQYTADVCRSDNGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGSGGSTFMQPTGAGSTNGLNLTSPLVIAGSAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0163162_1026701613300013306Switchgrass RhizosphereDATYNCVVIKMSDLIKFTPSASSGLCTAGTQYTADVCRSDNGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGSGGSTFMQPTGAGSTNGLNLTSPLVIAGSAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0157377_1173177213300014745Miscanthus RhizosphereTTAGLCSASVQYTADVCRSDNGGTTQSPDADGAPSACAGTDAAPVSDAVYLYLTTNASAGSGGNTFMQPTGPTSTNGLNLTAPLVIAGTAKSKFVVNAAGKVGDDGFSCGMNPPVFGFQKLP*
Ga0167659_104110033300015191Glacier Forefield SoilQYTADVCRTDNGGTTQAPDAVGAPTACRGTDAAPVSDAVHLYLTTNPLAGTGGGDTFMQPTSASSTNGLHLTAPLVIAGTAKSKFSVNATGKVGDDGVSCGMNPPVFGFQKLP*
Ga0137412_1052688113300015242Vadose Zone SoilGTEYVADVCRSDNGGTTHAPDAAGAMTSCTGTDAVPHADPVYLYLTTNASAGSGGGTFVQPTSISSSSGLNLTAPLIISGSAKSKFVVNATGKVSGSDVTCGMNPPVFGFKPVP*
Ga0193753_1016200013300020034SoilDVCRSDNGGMTRAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGSGGGNTFMQPASTASTDGLNLTAPLVIAGNARSKFVVNATGKVGSDSVSCGMNPPVFGFQKLP
Ga0247794_1014827523300024055SoilPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGTGGSTFMQPTGPTSGNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP
Ga0247794_1035721413300024055SoilAGTQYTADVCRSDNGGTTQAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGSGGATFMQPDSTVSGNGLNLTAPLVLAGMARSKFVVNATGKVGSDSVGCGMNPPVFGFQKLP
Ga0209697_1026031033300025316Freshwater Lake HypolimnionNNGTTQAPDAVGAATSCTGTDPAPVPDIVHLYLTTNALAGTGGNTFLQPTSSSSTNGIKLISPLVVAGTAKSKFVVNAAGAVDGNNSTCGMNPPAFGFVKL
Ga0207656_1066148713300025321Corn RhizosphereQYVADVCRTDNGGTTQAPDAIGAPTACMGTDAAPVSDAVYLYLTTNASAGTGGSTFMPPTDASSTNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFEKLP
Ga0209584_1034962023300025878Arctic Peat SoilCVIIKMSDLIKFTPSATSGLCTTGTQYTADVCRSDNGGMTQAPDAVGAPSLCTGTDAAPVSDPVYLYLTTNASAGTGGGNTFMQPTGPTSTNGLNLTAPLVIAGAAKSKFVVDAHGKVGDDGVSCGMNPPTFGFQKLP
Ga0207682_1036279723300025893Miscanthus RhizosphereTTGGSCAAGTEYVADVCRTDNGGTTHAPDAAGNVTSCTGTDAVPQSDAVYMYLTTNASAGTGGGTFTQPTSVNSTSGLHLTAPLVISGSAKSKFVVNATGKVSGADVSCGMNPPVFGFKPVP
Ga0207680_1107996013300025903Switchgrass RhizosphereQYTADVCRSDNGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGSGGSTFMQPTGAGSTNGLNLTSPLVIAGSAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP
Ga0207645_1001680613300025907Miscanthus RhizosphereSASVQYTADVCRSDNGGTTQSPDAVGAPSACAGTDAAPVSDAVYLYLTTNASAGSGGNTFMQPTGPTSTNGLNLTAPLVIAGTAKSKFVVNAAGKVGDDGFSCGMNPPVFGFQKLP
Ga0207645_1069469913300025907Miscanthus RhizosphereAPDSSARTACTGTDAAPHSDAVYMYLTTNASAGTGGEVFLQPTDVNSGYGLHLTAPLVIAGKAKSKFVVNATGKVGSDSVSCGMNPPVFGFQKVQ
Ga0207705_1105832323300025909Corn RhizosphereGLCMAGTQYTADVCRSDNGGTTQAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGNGGATFMQPDSSVSGNGLNLTAPLVLAGMARSKFVVNATGKVGSDSVGCGMNPPVFGFQKLP
Ga0207671_1152817413300025914Corn RhizospherePDATYDCVVIKMSDLIKFTPSASSGLCTAGTQYTADVCRSDNVGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGTGGSTFMQPTGPTSGNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP
Ga0207657_1122777313300025919Corn RhizosphereYHCVVIKMSDLIKFTPSASAGLCMAGTQYTADVCRSDNGGTTKAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGNGGAAFMQPDSSVSGNGLNLTAPLVLAGMARSKFVVNATGKVGSDSVGCGMNPPVFGFQKLP
Ga0207681_1032514923300025923Switchgrass RhizosphereDVCRSDNGGTTQAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGNGGATFMQPDSSVSGNGLNLTAPLVLAGMARSKFVVNATGKVGSDSVGCGMNPPVFGFQKLP
Ga0207650_1049305813300025925Switchgrass RhizosphereEYVADVCRTDNGGTTHAPDAAGNVTSCTGTDAAPQSDAVYMYLTTNASAGTGGGTFTQPTSVNSTSGLHLTAPLVISGSAKSKFVVNATGKVSGADVSCGMNPPVFGFKPVP
Ga0207650_1170432613300025925Switchgrass RhizosphereAPDAVGAPSACAGTDAAPVSDAVYLYLTTNASAGSGGNTFMQPTGPTSTNGLNLTAPLVIAGSAKSKFVVNAAGKVGDDGVSCGMNPPVFGFQKLP
Ga0207659_1116334613300025926Miscanthus RhizosphereSVQYTADVCRSDNGGTTQAPDAVGAPSACAGTDAAPVSDAVYLYLTTNASAGSGGNTFMQPTGPTSTNGLNLTAPLVIAGSAKSKFVVNAAGKVGDDGVSCGMNPPVFGFQKLP
Ga0207659_1126696313300025926Miscanthus RhizosphereGGTTQAPDAVGAPSACAGTDAAPVSDAVYLYLTTNASAGSGGNTFMQPTGPTSTNGLNLTAPLVIAGTAKSKFVVNAAGKVGDDGFSCGMNPPVFGFQKLP
Ga0207659_1132759223300025926Miscanthus RhizosphereTQAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGSGGATFMRPDSSVSGNGLNLTAPLVLAGMARSKFVVNATGKVGSDSVGCGMNPPVFGFQKLP
Ga0207644_1022753913300025931Switchgrass RhizosphereYHCVVIKMSDLIKFTPSASAGLCMAGTQYTADVCRSDNGGTTQAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGSGGATFMQPDSTVSGNGLNLTAPLVLAGMARSKFVVNATGKVGSDSVGCGMNPPVFGFQKLP
Ga0207644_1074933713300025931Switchgrass RhizosphereGLCSASVQYTADVCRTDNGGTTQAPDAVGAPNACNGTDAAPVADTVYLYLTTNASAGTGGSTFMQPTGPTSGNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP
Ga0207704_1118926113300025938Miscanthus RhizosphereGSGNPADGTYHCVVIKMSDLIKFTPSASAGLCMAGTQYTADVCRSDNGGTTQAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGSGGATFMQPDSTVSGNGLNLTAPLVLAGMARSKFVVNATGKVGSDSVGCGMNPPVFGFQKLP
Ga0207691_1007294843300025940Miscanthus RhizosphereKMSDLIKFTPSTTAGLCSASVQYTADVCRSDNGGTTQSPDAVGAPSACAGTDAAPVSDAVYLYLTTNASAGSGGNTFMQPTGPTSTNGLNLTAPLVIAGTAKSKFVVNAAGKVGDDGFSCGMNPPVFGFQKLP
Ga0207689_1023217433300025942Miscanthus RhizosphereAPDAVGAPSACAGTDAAPVSDAVYLYLTTNASAGSGGNTFMQPTGPTSTNGLNLTAPLVIAGTAKSKFVVNAAGKVGDDGFSCGMNPPVFGFQKLP
Ga0207679_1205064013300025945Corn RhizosphereSGNPADGTYHCVVIKMSDLIKFTPSASAGLCMAGTQYTADVCRSDNGGTTQAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGNGGATFMQPDSSVSGNGLNLTAPLVLAGMARSKFVVNATGKVGSDSVGCGMNPPVFGFQKLP
Ga0207667_1120998013300025949Corn RhizosphereTACTGTDAAPHSDAVYMYLTTNASAGTGREVFLQPTDVNSGYGLHLTAPLVIAGKAKSKFVVNATGKVGSDSVSCGMNPPVFGFQKVQ
Ga0207668_1038711323300025972Switchgrass RhizosphereADVCRSDNGGTTQAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGNGGATFMQPDSSVSGNGLNLTAPLVLAGMARSKFVVNATGKVGSDSVGCGMNPPVFGFQKLP
Ga0207640_1001911143300025981Corn RhizosphereAGTQYVADVCRSDNGATTQAPDPVGAPTACTGTDAAPVSDAVHLYLTTNASAGTGGNTFMPPTDASSTNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFEKLP
Ga0207658_1164474813300025986Switchgrass RhizosphereGNPPDGTYHCVVIKMSDLIKFTPSTTAGLCSASVQYTADVCRSDNGGTTQAPDAVGAPSACAGTDAAPVSDAVYLYLTTNASAGSGGNTFMQPTGPTSTNGLNLTAPLVIAGSAKSKFVVNAAGKVGDDGVSCGMNPPVFGFQKLP
Ga0207677_1020406113300026023Miscanthus RhizosphereNVTSCTGTDAAPQSDAVYMYLTTNASAGTGGGTFTQPTSENSTSGLHLTAPLVISGSAKSKFVVNATGKVSGADVSCGMNPPVFGFKPVP
Ga0207639_1055505513300026041Corn RhizosphereTYRCVIIRMSDLIKFTPRTSAGLCVAGTQYVADVCRTDNGGTTQAPDAIGAPTACMGTDAAPVSDAVYLYLTTNASAGTGGSTFMPPTDASSTNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPVFGFEKLP
Ga0209839_1020540713300026294SoilCTAGTQYVSDVCRSDNNGTTQAPDALGAPTACTGTDPAPLADVVYLYLTTNATAGVGGSTFMQPIGANSPNGLNLTAPLLIAGTASSKFIVNAIGKVDGSFSTCGMNPPVFGFQKLP
Ga0209698_1019023223300027911WatershedsMSDIIKFTPSSTSGSCTAATEYVADVCRSDNNGTTQAPDAVGAPSACTGTDAAPQADIVYLYLTTNASAGTGGNTFMQPTDANSGNGLHLSAPLVIAGSAKSKFVVNATGKVAGDFSTCGMNPPVFGFQKLP
Ga0307517_1054892613300028786EctomycorrhizaKFKPSSTSGTCTAGTEYVADVCRADNDGTTHAPDAAGATTVCTGTDAVPHADPVYLYLTTNASAGSGGQTFVQPSSFTSTSGLHLTAPLTIAGTAKSKFVVNASGKVSGADITCGMNPPVFGFVPVP
Ga0307503_1010700123300028802SoilMTQAPDVVGASTCTGTDPLPVSDAVYLYLTTNASAGSGGGNTFMQPTSVSSTNGLNLTAPLVIAGTAKSKFIVNATGKVGDDGVSCGMNPPLFGFLKLP
Ga0308174_1095392123300031939SoilSASAGLCVAGTQYTADVCRTDNSGTTQAPDAVGAPNACNGTDAAPVSDVVYLYLTTNGSAGSGSGSTFMQPTDASSTNGLNLTAPLVIAGSAKSKFVVDARGKVGDDGVSCGMNPPTFGFQKLP
Ga0307411_1091412113300032005RhizosphereKFTPSASAGLCVAGSQYTADVCRSDNGGMTRAPDAVGAPNACSGTDAAPVSDTVYLYLTTNASAGTGGNTFLQPTGPTSADGLNLTAPLVIAGTVKSKFIVNATGKVGDDGVSCGMNPPVFGFQKLP
Ga0308173_1109762223300032074SoilTQAPDAVGTPSTCTGTDAAPVSNPVYLYLTTNASAGMGGNTFMQPTGPSSTDGLNLTAPLVIAGSAKSKFIVNATGKVGDDGISCGMNPPVFGFQKLP
Ga0307470_1153534713300032174Hardwood Forest SoilGGMTKAPDAAGAPTVCTGTDAAPVSDPVYLYLTTNASAGSGGGNTFMQPTSTASTDGLNLTAPLVIAGNARSKFVVNATGKVGSDTVSCGMNPPVFGFQKLP
Ga0307507_1051246723300033179EctomycorrhizaTGAPTNCTGTDAAPHADTVYLYLTTNASAGSGGQTFVQPTSVASASGLNLTAPLTIAGNAKSKFVVNATGKVSGSDVTCGMNPPVFGFKPVP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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