Metagenome / Metatranscriptome Family F103866

Basic Information
Family ID	F103866
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	66 residues
Representative Sequence	KELGEYLGDRINNPLAVILASAQLLEMRQRSDATSEAAQRIGAAVSKINEVVREIAIRSGEVPRV
Number of Associated Samples	91
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (16.832 % of family members)
Environment Ontology (ENVO)	Unclassified (27.723 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.495 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86. 1JGI25386J43895_100129984 2soilL2_100850333 3Ga0066398_102046041 4Ga0063356_1027626811 5Ga0062591_1007075262 6Ga0066672_101390021 7Ga0066673_107304251 8Ga0066679_108779571 9Ga0066679_108924291 10Ga0066675_103375692 11Ga0066388_1082566161 12Ga0070691_108650291 13Ga0066686_106649832 14Ga0066686_110647462 15Ga0066687_102349041 16Ga0068867_1013080881 17Ga0073909_101939982 18Ga0066661_105929882 19Ga0066692_109223452 20Ga0066698_102410181 21Ga0066700_105705071 22Ga0070664_1023990771 23Ga0066703_104463101 24Ga0066706_113534062 25Ga0068859_1007877151 26Ga0066905_1008913581 27Ga0075285_10533522 28Ga0075417_100688163 29Ga0075417_106872031 30Ga0082029_11220161 31Ga0074049_126805941 32Ga0079220_120313231 33Ga0075425_1018713792 34Ga0075434_1004904391 35Ga0075419_100332285 36Ga0066710_1028143211 37Ga0066710_1043688512 38Ga0111539_111775331 39Ga0111539_118119882 40Ga0066709_1040073631 41Ga0066709_1043959451 42Ga0105092_101496081 43Ga0075423_109658171 44Ga0075423_110011871 45Ga0105241_105757981 46Ga0126374_118088012 47Ga0105078_10561711 48Ga0126384_108802871 49Ga0134071_105919391 50Ga0126370_100847523 51Ga0126372_117145122 52Ga0134125_128791492 53Ga0134124_131603431 54Ga0134123_104725551 55Ga0137362_106727541 56Ga0137358_108472071 57Ga0137410_100427435 58Ga0134078_100534432 59Ga0075312_10065861 60Ga0075314_10338232 61Ga0137420_12520711 62Ga0134073_100356632 63Ga0132255_1022346892 64Ga0132255_1037737262 65Ga0134112_101777431 66Ga0187774_111061871 67Ga0066667_100156956 68Ga0207642_107424882 69Ga0207662_102667791 70Ga0207706_106489911 71Ga0207651_116516611 72Ga0208419_10297332 73Ga0209237_10231021 74Ga0209469_10866311 75Ga0209152_104789252 76Ga0209056_106524781 77Ga0209161_103959742 78Ga0256866_11751451 79Ga0209073_105186301 80Ga0209177_102301491 81Ga0209814_105004352 82Ga0209382_113761772 83Ga0268264_126818212 84Ga0247822_106023152 85Ga0247825_109076832 86Ga0310886_103659122 87Ga0307468_1014121041 88Ga0307413_118262162 89Ga0310892_104270661 90Ga0307407_104532632 91Ga0310884_101543271 92Ga0307416_1014288751 93Ga0307411_102344742 94Ga0307411_111122311 95Ga0307411_115351922 96Ga0310889_102198222 97Ga0307471_1029795921 98Ga0335084_106162212 99Ga0326726_112644562 100Ga0247829_117074931 101Ga0364932_0073974_1035_1280
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86. 1JGI25386J43895_100129984 2soilL2_100850333 3Ga0066398_102046041 4Ga0063356_1027626811 5Ga0066672_101390021 6Ga0066673_107304251 7Ga0066388_1082566161 8Ga0066905_1008913581 9Ga0082029_11220161 10Ga0075434_1004904391 11Ga0075419_100332285 12Ga0134078_100534432 13Ga0208419_10297332 14Ga0268264_126818212
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64. 1Ga0187774_111061871 2Ga0066398_102046041 3Ga0066673_107304251 4Ga0066675_103375692 5Ga0066686_106649832 6Ga0075285_10533522 7Ga0075417_100688163 8Ga0074049_126805941 9Ga0066709_1043959451 10Ga0075423_109658171 11Ga0126370_100847523 12Ga0134078_100534432 13Ga0207662_102667791 14Ga0208419_10297332 15Ga0247825_109076832 16Ga0307413_118262162 17Ga0247829_117074931
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.91% β-sheet: 0.00% Coil/Unstructured: 44.09%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00441	Acyl-CoA_dh_1	45.54
PF00512	HisKA	16.83
PF02771	Acyl-CoA_dh_N	11.88
PF02770	Acyl-CoA_dh_M	4.95
PF13343	SBP_bac_6	2.97
PF06508	QueC	1.98
PF12911	OppC_N	0.99
PF02900	LigB	0.99
PF13701	DDE_Tnp_1_4	0.99
PF02592	Vut_1	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	62.38
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	1.98
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	1.98
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	1.98
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.98
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	1.98
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	1.98
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.98
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	1.98
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	1.98

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
No data available in table

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.28%
Host-Associated	Host-Associated	27.72%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	0.99%
Plants	Host-Associated → Plants	27.72%
Terrestrial	Environmental → Terrestrial	71.29%

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	0.99%
Freshwater	Environmental → Aquatic → Freshwater	0.99%
Peat	Environmental → Terrestrial → Peat	0.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.79%
Soil	Environmental → Terrestrial → Soil	69.31%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.95%
Loam	Environmental → Terrestrial → Soil → Loam	5.94%
Sand	Environmental → Terrestrial → Soil → Sand	0.99%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.94%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.96%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.98%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.97%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.94%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.96%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M

Showing 1 to 10 of 91 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25386J43895_100129984	3300002912	Grasslands Soil	INNPLAVIMASAQLLEMRAPSNATSEAAERITTAVSKINAVVREIASKSGEMA*
soilL2_100850333	3300003319	Sugarcane Root And Bulk Soil	QAAQLAVLRELGEYLGDRINNPLAVILASAQLLEMKAPSDATSEAAERIAGAVKKINAVV
Ga0066398_102046041	3300004268	Tropical Forest Soil	AETQRTVEAAELALLKELGEYLGDRINNPLAVILASAQLLEMKDRNSATSEAAQRIGAAVARINAVVREIAIRSGEAPVS*
Ga0063356_1027626811	3300004463	Arabidopsis Thaliana Rhizosphere	ELGEYLGDRINNPLAVILASAQLLQMKERSSATSEAAARISEAVSRINGVVREIAIRSGEMPRA*
Ga0062591_1007075262	3300004643	Soil	NPLAVILASAQLLEMKAPSDATSEATERIAGAVEKINAVVREIARRSGEAD*
Ga0066672_101390021	3300005167	Soil	ERHAFAQNTERTVETAQLALLKELGEYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIASKSGERGVR*
Ga0066673_107304251	3300005175	Soil	LTERADRKVEAAQLALLKELGEFLGDRINNPLAVIMASAQLLEMRAPSDATSQAAERVTAAVSKITAVVREIAAKSGDELIS*
Ga0066679_108779571	3300005176	Soil	VETAQLALLKELGEYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIASKSGERGVR*
Ga0066679_108924291	3300005176	Soil	VETAQLALLKELGEYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIAAKSGERGVS*
Ga0066675_103375692	3300005187	Soil	LALLKELGEYLGDRINNPLAVILASAQLLEMKERSNATTEAAQRIGAAVGKINEVVREIAIRSGETPIV*
Ga0066388_1082566161	3300005332	Tropical Forest Soil	RSMAEAQRTVKSAELQLLKELGEYLGDRINNPLAVILGSAQLLEMRDHSQAASEAAERIGAAVSKINDVVREIASRSGVALR*
Ga0070691_108650291	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	LGEYLGDRINNPLAVILASAQLLQMKERSSATSEAAQRIGEAVSRINGVVREIAIRSGELPRA*
Ga0066686_106649832	3300005446	Soil	LAVIMASAQLLEMRAPSSATSEAAERITTAVSKINAVVREIASKSGEMA*
Ga0066686_110647462	3300005446	Soil	GDRINNPLAVIMASAQLLEMRAPGTATTEAAERITAAVSKINAVVREIAEKSGERVV*
Ga0066687_102349041	3300005454	Soil	EAAQLALLKELGEFLGDRINNPLAVIMASAQLLEMRAPGSATTEAAERITAAVSKINAVVREIAEKSGERVV*
Ga0068867_1013080881	3300005459	Miscanthus Rhizosphere	EYLGDRINNPLAVILASAQLLQMKERSSATSEAAQRIGEAVSRINGVVREIAIRSGELPRA*
Ga0073909_101939982	3300005526	Surface Soil	SADAQRTVQAAELALLRELGEYLGDRINNPLAVILASAQLLEMKEHNAATSEAAERIGTAVAKINAVVREIAVRSGEAPVE*
Ga0066661_105929882	3300005554	Soil	GEYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIASKSGERGVR*
Ga0066692_109223452	3300005555	Soil	DRKVEAAQLALLKELGEFLGDRINNPLAVIMASAQLLEMRAPGSATTEAAERITAAVSKINAVVREIAEKSGERVI*
Ga0066698_102410181	3300005558	Soil	RTVETAQLALLKELGEYLGDRINNPLAVILASAQLLEMKERSHATSEAAQRIGAAVSKINDVVREIAIRSGEQPRG*
Ga0066700_105705071	3300005559	Soil	AQNTERTVETAQLALLKELGEYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIASKSGERGVR*
Ga0070664_1023990771	3300005564	Corn Rhizosphere	LLKELGEYLGDRINNPLAVILASAQLLQMKERSSATSEAAQRIGEAVSRINTVVREIAIRSGEIPRA*
Ga0066703_104463101	3300005568	Soil	AQNTERTVETAQLALLKELGEYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIAAKSGERGVS*
Ga0066706_113534062	3300005598	Soil	LALLKELGEYLGDRINNPLAVILASAQLLEMKERSNATHEAAQRIGAAVSKINDVVREIAIRSGEQPRG*
Ga0068859_1007877151	3300005617	Switchgrass Rhizosphere	QRTVQAAELALLRELGEYLGDRINNPLAVILASAQLLEMKEHNAATSEAAQRIGSAVAKINAVVREIAVRSGEAPIE*
Ga0066905_1008913581	3300005713	Tropical Forest Soil	QLALLKQLGEFLGDRINNPLAVIMASAQLLEMRAPSDATSEAAERITAAVSKINAVVREIASKSGEV*
Ga0075285_10533522	3300005890	Rice Paddy Soil	QAAELALLKELGEYLGDRINNPLAVILGSAQLLEMKDRSHATSEAAQRIAAAVSKINEVVREIASRSGETPHR*
Ga0075417_100688163	3300006049	Populus Rhizosphere	LKELGEFLGDRINNPLAVIMASAQLLEMRAPGNATSEAAERITAAVSKINAVVREIAVRSGERAS*
Ga0075417_106872031	3300006049	Populus Rhizosphere	RINNPLAVILASAQLLQLKERSTATSEAAERIGEAVSRINQVVREIAIRSGEIPRV*
Ga0082029_11220161	3300006169	Termite Nest	LGDRITNPLAVILASAPLLEMKDRNSATSEAAQRIGAAVAKINAVVREIAIRSGEAPVS*
Ga0074049_126805941	3300006580	Soil	VKSAELQLLKELGEYLGDRINNPLAVILGSAQLLEMRDHSQAASEAAERIGAAVSKINDVVREIATRSGVALR*
Ga0079220_120313231	3300006806	Agricultural Soil	VIMASAQLLEMRAPSDATSEAAERITAAVSKINAVVREIASKSGDVVR*
Ga0075425_1018713792	3300006854	Populus Rhizosphere	VEAAQLALLKELGEFLGDRIHNPLAVIMASAQLLEMRAPSNATSEAAERITAAVSKINAVVREIASKSGERV*
Ga0075434_1004904391	3300006871	Populus Rhizosphere	AVILASAQLLEMKERSHATSEAAQRIGAAVSKINDVVREIALRSGETPRT*
Ga0075419_100332285	3300006969	Populus Rhizosphere	EYLGDRINNPLAVILASAQLLEMKAPSDATTEAAERIAGAVKKINTVVREIARRSGEAD*
Ga0066710_1028143211	3300009012	Grasslands Soil	TVETAQLALLKELGEYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIAAKSGERGVS
Ga0066710_1043688512	3300009012	Grasslands Soil	LGEYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIASKSGERGVR
Ga0111539_111775331	3300009094	Populus Rhizosphere	RINNPLAVILASAQLLEMKEHNAATSEAAERIGTAVAKINAVVREIAVRSGEAPVE*
Ga0111539_118119882	3300009094	Populus Rhizosphere	LASAQLLEMKERSHATSEAAQRIGAAVSKINDVVREIALRSGETPRT*
Ga0066709_1040073631	3300009137	Grasslands Soil	LGEYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIASKSGERGVR*
Ga0066709_1043959451	3300009137	Grasslands Soil	TVETAQLALLKELGEYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIAAKSGERGVS*
Ga0105092_101496081	3300009157	Freshwater Sediment	SAELALLKELGEYLGDRINNPLAVILASAQLLQIKERSDATSAAAQRIGEAVSRINGVVREIAIRSGEVPRV*
Ga0075423_109658171	3300009162	Populus Rhizosphere	LKELGEYLGDRINNPLAVILASAQLLEMKERSHATSEAAQRIGAAVSKINDVVREIALRSGETPRT*
Ga0075423_110011871	3300009162	Populus Rhizosphere	RINNPLAVILASAQLLEMKERSHATSEAAQRIGAAVSKINDVVREIALRSGETPRT*
Ga0105241_105757981	3300009174	Corn Rhizosphere	EAQRTVKSAELQLLKELGEYLGDRINNPLAVILGSAQLLEMRDHSQAASEAAERIGAAVSKINDVVREIASRSGVDLR*
Ga0126374_118088012	3300009792	Tropical Forest Soil	ALLKQLGEFLGDRINNPLAVIMASAQLLEMRAPSDATSEAAERITAAVSKINAVVREIALKSGEV*
Ga0105078_10561711	3300009823	Groundwater Sand	NPLAVILASAQLLEMKAPGDATTEAAERIAGAVKKINAVVREIARRSGEAD*
Ga0126384_108802871	3300010046	Tropical Forest Soil	RKVEAAELALLKQLGEFLGDRINNPLAVIMASAQLLEMRAPSDATSEAAERITAAVSKINAVVREIALKSGEV*
Ga0134071_105919391	3300010336	Grasslands Soil	AQLALLKELGEFLGDRINNPLAIIMASTQLLEMRAPGNATSEAAERITAAVSKINAVVREIAVRSGEAPR*
Ga0126370_100847523	3300010358	Tropical Forest Soil	RINNPLAVIMASAQLLEMRAPSDATSEAAQRITAAVSKINAVVREIALKSGEV*
Ga0126372_117145122	3300010360	Tropical Forest Soil	EAAELALLKQLGEFLGDRINNPLAVIMASAQLLEMRAPSDATSEAAERITAAVSKINAVVREIASKSGEV*
Ga0134125_128791492	3300010371	Terrestrial Soil	LAVILASAQLLEMKEHNAATSEAAERIGTAVAKINAVVREIAVRSGEAPVE*
Ga0134124_131603431	3300010397	Terrestrial Soil	YLGDRINNPLAVILASAQLLQMKERSSATSEAAQRIGEAVSRINTVVREIAIRSGEIPRA
Ga0134123_104725551	3300010403	Terrestrial Soil	ELALLKELGEYLGDRINNPLAVILASAQLLQMKERSSATSEAAQRIGEAVSRINGVVREIAIRSGELPRA*
Ga0137362_106727541	3300012205	Vadose Zone Soil	HERQALAERTDRKVEAAQLALLKELGEFLGDRINNPLAVIMASAQLLEMRAPSNATSEAAERITTAVSKINAVVREIASKSGEMA*
Ga0137358_108472071	3300012582	Vadose Zone Soil	EYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITMAVSKINAVVREIAAKSGERGVS*
Ga0137410_100427435	3300012944	Vadose Zone Soil	DRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIAAKSGERGVS*
Ga0134078_100534432	3300014157	Grasslands Soil	PLAVIMASAQPLEMRAPGSATTEDAERITAAVSKINAVVREIAEKSSERVI*
Ga0075312_10065861	3300014254	Natural And Restored Wetlands	NPLAVILASAQLLEMKAPGDATTEAAERIAGAVKKINAVVREIARRSGEVD*
Ga0075314_10338232	3300014265	Natural And Restored Wetlands	LGEYLGDRINNPLAVILASAQLLEMKAPGDATTEAAERIAGAVKKINAVVREIARRSGEVD*
Ga0137420_12520711	3300015054	Vadose Zone Soil	LGEYLGEYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIAAKSGERGVS*
Ga0134073_100356632	3300015356	Grasslands Soil	QLALLKELGEFLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITAAVSKINAVVREIAEKSGERVV*
Ga0132255_1022346892	3300015374	Arabidopsis Rhizosphere	LGDRINNPLAVILASAQLLEMKEHNAATSEAAERIGTAVAKINAVVREIAVRSGEAPVE*
Ga0132255_1037737262	3300015374	Arabidopsis Rhizosphere	LGDRINNPLAVIMASAQLLEMRAPSDATSEAAERITAAVSKINAVVREIALKSGEV*
Ga0134112_101777431	3300017656	Grasslands Soil	VEAQRTVQAAELALLRELGEYLGDRINNPLAVILASAQLLEMKERSHATSEAAHRIGAAVSKINEVVREIAIRSGETPRA
Ga0187774_111061871	3300018089	Tropical Peatland	KELGEYLGDRINNPLAVILASAQLLEMRQRSDATSEAAQRIGAAVSKINEVVREIAIRSGEVPRV
Ga0066667_100156956	3300018433	Grasslands Soil	KELGEYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIASKSGERGVR
Ga0207642_107424882	3300025899	Miscanthus Rhizosphere	LLKELGEYLGDRINNPLAVILGSAQLLEMRDHSQAASEAAERIGAAVSKINYVVREIATRSGVALR
Ga0207662_102667791	3300025918	Switchgrass Rhizosphere	QAAELALLRELGEYLGDRINNPLAVILASAQLLEMKEHNAATSEAAQRIGSAVAKINAVVREIAVRSGEAPVE
Ga0207706_106489911	3300025933	Corn Rhizosphere	RINNPLAVILASAQLLQMKERSSATSEAAQRIGEAVSRINGVVREIAIRSGELPRA
Ga0207651_116516611	3300025960	Switchgrass Rhizosphere	TEAQRTVKSAELQLLKELGEYLGDRINNPLAVILGSAQLLEMRDHSQAASEAAERIGAAVSKINDVVREIATRSGVALR
Ga0208419_10297332	3300026032	Natural And Restored Wetlands	ALSLNVDRDVQAAQLAVLRELGEYLGDRINNPLAVILASAQLLEMKAPGDATTEAAERIAGAVKKINAVVREIARRSGEVD
Ga0209237_10231021	3300026297	Grasslands Soil	GDRINNPLAVIMASAQLLEMRAPSNATSEAAERITTAVSKINAVVREIASKSGEMA
Ga0209469_10866311	3300026307	Soil	KELGEFLGDRINNPLAVIMASAQLLEMRAPGSATTEAAERITAAVSKINAVVREIAEKSGERVI
Ga0209152_104789252	3300026325	Soil	RTVETAQLALLKELGEYLGDRINNPLAVIMASAQLLEMRAPGNATTEAAERITIAVSKINAVVREIASKSGERGVR
Ga0209056_106524781	3300026538	Soil	VQAAELALLKELGEYLGDRINNPLAVILASAQLLEMKERSHATSEAAHRIGAAVSKINEVVREIAIRSGETPRA
Ga0209161_103959742	3300026548	Soil	QRRVQAAELALLKELGEYLGDRINNPLAVILASAQLLEMKEHSHATSEAAQRIGAAVSKINDVVREIAIRSGEQPRG
Ga0256866_11751451	3300027650	Soil	ELGEYLGDRINNPLAVILASAQLLQMKERSNATSEAAQRIGEAVSRINGVVREIAIRSGEIPRV
Ga0209073_105186301	3300027765	Agricultural Soil	VIMASAQLLEMRAPSDATSEAAERITAAVSKINAVVREIASKSGDVVR
Ga0209177_102301491	3300027775	Agricultural Soil	DRINNPLAVILASAQLLQMRERSNATSEAADRIGEAVSRINQVVREIAIRSGEVPRA
Ga0209814_105004352	3300027873	Populus Rhizosphere	YLGDRINNPLAVILASAQLLQLKERSTATSEAAERIGEAVSRINQVVREIAIRSGEIPRV
Ga0209382_113761772	3300027909	Populus Rhizosphere	ELGEYLGDRINNPLAVILASAQLLEMKAPSDATTEAADRIAGAVKKINAVVREIARRSGEVD
Ga0268264_126818212	3300028381	Switchgrass Rhizosphere	LGEYLGDRINNPLAVILGSAQLLEMRDHSQAASEAAERIGAAVSKINDVVREIATRSGVALR
Ga0247822_106023152	3300028592	Soil	GDRINNPLAVILGSAQLLEMRDHSQAASEAAERIGAAVSKINDVVREIASRSGVALR
Ga0247825_109076832	3300028812	Soil	AELALLRELGEYLGDRINNPLAVILASAQLLQMKERSSATSEAAARIGEAVSRINGVVREIAIRSGEMPRA
Ga0310886_103659122	3300031562	Soil	GDRINNPLAVILASAQLLQMKERSSATSEAAQRIGEAVSRINGVVREIAIRSGELPRA
Ga0307468_1014121041	3300031740	Hardwood Forest Soil	LGEYLGDRINNPLAVILGSAQLLEMRDHSQAASEAADRIGAAVSKINDVVREIASRSGVALR
Ga0307413_118262162	3300031824	Rhizosphere	DRINNPLAVILASAQLLEMKERSIATSEAAERIGAAVSKINEVVREIAIRSGEQPRP
Ga0310892_104270661	3300031858	Soil	QRTVKSAELQLLKELGEYLGDRINNPLAVILGSAQLLEMRDHSQAASEAAERIGAAVSKINDVVREIASRSGVDLR
Ga0307407_104532632	3300031903	Rhizosphere	YLGDRINNPLAVILASAQLLEMKAPSDATSEAAERIAGAVKKINAVVREIARRSGEVD
Ga0310884_101543271	3300031944	Soil	EYLGDRINNPLAVILGSAQLLEMRDHSQAASEAAERIGAAVSKINDVVREIASRSGVDLR
Ga0307416_1014288751	3300032002	Rhizosphere	VQAAQLAVLRELGEYLGDRINNPLAVILASAQLLEMKAPSDATSEAAERIAGAVKKINAVVREIARRSGEVD
Ga0307411_102344742	3300032005	Rhizosphere	EAQRTVQSAELALLKELGEYLGDRINNPLAVILASAQLLEMKERSIATSEAAERIGAAVSKINEVVREIAIRSGEQPRP
Ga0307411_111122311	3300032005	Rhizosphere	LGDRINNPLAVILASAQLLEMKAPGDATTEAAEHIAGAVKKINAVVREIARRSGEAD
Ga0307411_115351922	3300032005	Rhizosphere	LGEYLGDRINNPLAVILASAQLLQMKERSTATSEAAQRISEAVSRINGVVREIAIRSGEVPRS
Ga0310889_102198222	3300032179	Soil	NPLAVILGSAQLLEMRDHSQAASEAAERIGAAVSKINDVVREIASRSGVALR
Ga0307471_1029795921	3300032180	Hardwood Forest Soil	GDRINNPLAVILGSAQLLEMRDHSQAASEAADRIGAAVSKINDVVREIASRSGVALR
Ga0335084_106162212	3300033004	Soil	VKSAELQLLKELGEYLGDRINNPLAVILGSAQLLEMRDHSQAASEAAERIGAAVSKINDVVREIASRSGVELR
Ga0326726_112644562	3300033433	Peat Soil	RINNPLAVILASAQLLQMRERSTATSEAADRIGEAVSRINQVVREIAIRSGEVPRV
Ga0247829_117074931	3300033550	Soil	VQGAELALLKELGEYLGDRINNPLAVILASAQLLQIKERSTATSEAADRIGEAVSRINQVVREIAIRSGEIPRV
Ga0364932_0073974_1035_1280	3300034177	Sediment	MAEAQRTVQGAELALLKELGEYLGDRINNPLAVILASAQLLQMKERSTATNEAADRIGEAVSRINKVVREIAVRSGEAPRI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103866

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences