Metagenome Family F103675

Basic Information
Family ID	F103675
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	69 residues
Representative Sequence	MIRPAATGLATAFYRLYLLDSLASAPARPATLLATIASERLPLANGAFGRALQSLLEGGYLVPAP
Number of Associated Samples	88
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.75 %
% of genes near scaffold ends (potentially truncated)	78.22 %
% of genes from short scaffolds (< 2000 bps)	69.31 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Bacteria (69.307 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (20.792 % of family members)
Environment Ontology (ENVO)	Unclassified (29.703 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.535 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.16% β-sheet: 0.00% Coil/Unstructured: 54.84%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00006	ATP-synt_ab	13.86
PF00781	DAGK_cat	12.87
PF02518	HATPase_c	11.88
PF00072	Response_reg	8.91
PF00581	Rhodanese	7.92
PF13424	TPR_12	6.93
PF13374	TPR_10	5.94
PF07498	Rho_N	2.97
PF01266	DAO	1.98
PF07497	Rho_RNA_bind	1.98
PF00510	COX3	0.99
PF13649	Methyltransf_25	0.99
PF07687	M20_dimer	0.99
PF03352	Adenine_glyco	0.99
PF01546	Peptidase_M20	0.99
PF04820	Trp_halogenase	0.99
PF00440	TetR_N	0.99
PF06965	Na_H_antiport_1	0.99
PF06736	TMEM175	0.99
PF00149	Metallophos	0.99
PF00106	adh_short	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	25.74
COG1158	Transcription termination factor Rho	Transcription [K]	1.98
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	0.99
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	0.99
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.99
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.31 %
Unclassified	root	N/A	30.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.31 %
Unclassified	root	N/A	30.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.31 %
Unclassified	root	N/A	30.69 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.50 %
Unclassified	root	N/A	30.69 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	31.68 %
Unclassified	root	N/A	30.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.97 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	30.69 %
Unclassified	root	N/A	30.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.69 %
Unclassified	root	N/A	30.69 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.99 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.69 %
Unclassified	root	N/A	30.69 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.69 %
Unclassified	root	N/A	30.69 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.99 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.69 %
Unclassified	root	N/A	30.69 %
unclassified Amycolatopsis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis	0.99 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.69 %
Unclassified	root	N/A	30.69 %
Amycolatopsis sp. FDAARGOS 1241	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. FDAARGOS 1241	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_100062059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1784	Open in IMG/M
3300005093\|Ga0062594_100247081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1301	Open in IMG/M
3300005166\|Ga0066674_10399692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300005174\|Ga0066680_10911227	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005179\|Ga0066684_10329381	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300005294\|Ga0065705_10137531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2244	Open in IMG/M
3300005295\|Ga0065707_10392196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	863	Open in IMG/M
3300005330\|Ga0070690_101787574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300005343\|Ga0070687_100291385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1032	Open in IMG/M
3300005438\|Ga0070701_11368395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	508	Open in IMG/M
3300005444\|Ga0070694_100720368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	813	Open in IMG/M
3300005468\|Ga0070707_100354138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1426	Open in IMG/M
3300005468\|Ga0070707_100724640	Not Available	957	Open in IMG/M
3300005529\|Ga0070741_10001870	All Organisms → cellular organisms → Bacteria	60207	Open in IMG/M
3300005554\|Ga0066661_10469356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	766	Open in IMG/M
3300005575\|Ga0066702_10477133	All Organisms → cellular organisms → Bacteria → Terrabacteria group	762	Open in IMG/M
3300005586\|Ga0066691_10883756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	526	Open in IMG/M
3300005617\|Ga0068859_103141239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300006175\|Ga0070712_100397760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1137	Open in IMG/M
3300006796\|Ga0066665_10032476	All Organisms → cellular organisms → Bacteria	3441	Open in IMG/M
3300006796\|Ga0066665_10294768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1301	Open in IMG/M
3300006854\|Ga0075425_101280497	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300006854\|Ga0075425_102992044	All Organisms → cellular organisms → Bacteria → Terrabacteria group	517	Open in IMG/M
3300006894\|Ga0079215_11632328	All Organisms → cellular organisms → Bacteria → Terrabacteria group	514	Open in IMG/M
3300006903\|Ga0075426_11014223	Not Available	627	Open in IMG/M
3300006904\|Ga0075424_100699780	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300006914\|Ga0075436_100812126	All Organisms → cellular organisms → Bacteria → Terrabacteria group	697	Open in IMG/M
3300007004\|Ga0079218_11021493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	831	Open in IMG/M
3300009038\|Ga0099829_10456651	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300009090\|Ga0099827_11374899	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300009137\|Ga0066709_100594571	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300010320\|Ga0134109_10017064	All Organisms → cellular organisms → Bacteria	2186	Open in IMG/M
3300010333\|Ga0134080_10497581	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300011266\|Ga0151622_1062299	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300011270\|Ga0137391_10801350	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300012096\|Ga0137389_10031094	All Organisms → cellular organisms → Bacteria	3874	Open in IMG/M
3300012096\|Ga0137389_11846421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300012200\|Ga0137382_10120728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1751	Open in IMG/M
3300012203\|Ga0137399_10816643	Not Available	785	Open in IMG/M
3300012204\|Ga0137374_10813842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. FDAARGOS 1241	692	Open in IMG/M
3300012210\|Ga0137378_10546578	Not Available	1067	Open in IMG/M
3300012285\|Ga0137370_10627640	Not Available	666	Open in IMG/M
3300012358\|Ga0137368_10307979	Not Available	1068	Open in IMG/M
3300012360\|Ga0137375_10935160	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300012532\|Ga0137373_10444297	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300012532\|Ga0137373_10986682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300012685\|Ga0137397_10456493	Not Available	952	Open in IMG/M
3300012944\|Ga0137410_11915726	All Organisms → cellular organisms → Bacteria → Terrabacteria group	525	Open in IMG/M
3300012972\|Ga0134077_10053156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1498	Open in IMG/M
3300013306\|Ga0163162_12821115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	559	Open in IMG/M
3300013766\|Ga0120181_1132462	All Organisms → cellular organisms → Bacteria → Terrabacteria group	544	Open in IMG/M
3300014031\|Ga0120173_1056238	All Organisms → cellular organisms → Bacteria → Terrabacteria group	567	Open in IMG/M
3300015086\|Ga0167655_1003656	All Organisms → cellular organisms → Bacteria	3638	Open in IMG/M
3300015209\|Ga0167629_1004374	All Organisms → cellular organisms → Bacteria	5380	Open in IMG/M
3300018027\|Ga0184605_10151705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1043	Open in IMG/M
3300018063\|Ga0184637_10583756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	636	Open in IMG/M
3300018074\|Ga0184640_10046239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1786	Open in IMG/M
3300018076\|Ga0184609_10410864	All Organisms → cellular organisms → Bacteria → Terrabacteria group	628	Open in IMG/M
3300018078\|Ga0184612_10396347	Not Available	694	Open in IMG/M
3300018482\|Ga0066669_10985342	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300018482\|Ga0066669_12108860	All Organisms → cellular organisms → Bacteria → Terrabacteria group	532	Open in IMG/M
3300026314\|Ga0209268_1111284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	713	Open in IMG/M
3300026317\|Ga0209154_1004106	All Organisms → cellular organisms → Bacteria	7757	Open in IMG/M
3300026323\|Ga0209472_1313224	All Organisms → cellular organisms → Bacteria → Terrabacteria group	504	Open in IMG/M
3300026327\|Ga0209266_1267174	All Organisms → cellular organisms → Bacteria → Terrabacteria group	543	Open in IMG/M
3300026328\|Ga0209802_1010056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5648	Open in IMG/M
3300026328\|Ga0209802_1241339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	632	Open in IMG/M
3300026343\|Ga0209159_1085236	Not Available	1411	Open in IMG/M
3300026532\|Ga0209160_1054186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2292	Open in IMG/M
3300026550\|Ga0209474_10747231	Not Available	510	Open in IMG/M
3300026861\|Ga0207503_1014272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300027691\|Ga0209485_1228850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	590	Open in IMG/M
3300027765\|Ga0209073_10343791	All Organisms → cellular organisms → Bacteria → Terrabacteria group	600	Open in IMG/M
3300027886\|Ga0209486_10268368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	993	Open in IMG/M
3300028799\|Ga0307284_10324986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	620	Open in IMG/M
3300028814\|Ga0307302_10326531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	756	Open in IMG/M
3300028828\|Ga0307312_10741636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	651	Open in IMG/M
3300031716\|Ga0310813_10558786	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1007	Open in IMG/M
3300031740\|Ga0307468_101217570	All Organisms → cellular organisms → Bacteria → Terrabacteria group	680	Open in IMG/M
3300033812\|Ga0364926_103851	All Organisms → cellular organisms → Bacteria → Terrabacteria group	588	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.11%
Host-Associated	Host-Associated	10.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.17%
Plants	Host-Associated → Plants	10.89%
Aquatic	Environmental → Aquatic	5.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.92%
Sediment	Environmental → Aquatic → Sediment	4.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.97%
Freshwater	Environmental → Aquatic → Freshwater	0.99%
Floodplain	Environmental → Terrestrial → Floodplain	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.27%
Loam	Environmental → Terrestrial → Soil → Loam	8.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.97%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.97%
Acid Mine Drainage	Environmental → Aquatic → Freshwater → Groundwater → Acid Mine Drainage	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.99%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	5.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.95%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	3.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.98%
Sediment	Environmental → Aquatic → Freshwater → Groundwater → Acid Mine Drainage → Sediment	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300011266	Acid mine drainage microbial communities from Malanjkhand copper mine, India - M16 k-mer 55	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300014031	Permafrost microbial communities from Nunavut, Canada - A35_80cm_0.25M	Environmental	Open in IMG/M
3300015086	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5c, rocky medial moraine)	Environmental	Open in IMG/M
3300015164	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015209	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026861	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A5a-12 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300033812	Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AL20A1W_11981911	3300000880	Permafrost	MLRPATTGLATAFFRLYLLDALVAAPERPAALLARIADAGLPFATGAYGRALQSLLDGGHLT
Ga0062595_1000620592	3300004479	Soil	VVRPAATGLATAFYRLYLLEALASTTARPATLLAEISSERLPLASGAFGRALQSLLE
Ga0062594_1002470812	3300005093	Soil	VVRPTATGLATAFYRLYLLEALASTTARPATLLAEISSERLPLASGAFGRALQSLLEGGHLVPAAE
Ga0066674_103996921	3300005166	Soil	MVRAAATGLATAFFRLYLLEGLAPGPARPAALLAAIAAEQLPFARGAFGRALQSLIEGGYIAPA
Ga0066680_109112272	3300005174	Soil	MIRPSATGLATAFYRLYLLDSLASAPARPATLLATIAGERLPLANGAFGRALQSLLEGGYLVPAPEAAVALTALGAAER
Ga0066684_103293811	3300005179	Soil	VVRPAMTGLGTAFFRLYLLEVLVPAPARPAALLAAISAERLPLSSGGFSRALQALLAGGYVVPAP
Ga0066676_110490561	3300005186	Soil	VSPPSEGSTVRPTATGLATAFFRLYLLESLAAGQARPAALLAAIAAERLPFAAGAFGRALQSLV
Ga0065705_101375311	3300005294	Switchgrass Rhizosphere	VVRPTATGLATAFYRLYLLEALASTTARPATLLAKISAERLPLASGAFGRALQSLLEGGHLVPAPEAAVALTPLGAAER
Ga0065707_103921962	3300005295	Switchgrass Rhizosphere	VVRPTATGLATAFYRLYLLEALASTTARPATLLAEISSERLPLASGAFGRALQSLLEGGHLVPAAEAAVALTPLGAAERVAE
Ga0070690_1017875741	3300005330	Switchgrass Rhizosphere	VVRPTATGLATAFYRLYLLEALASTTARPATLLAEISSERLPLASGAFGRALQSLLEGGHLVP
Ga0070687_1002913851	3300005343	Switchgrass Rhizosphere	VVRPAATGLATAFYRLYLLEALASTTARPATLLAEISSERLPLASGAFGRALQSLLEGG
Ga0070673_1012444731	3300005364	Switchgrass Rhizosphere	MRPTATGLATAFFRLYLLDTLSHAPARPASILAHVAAEKLPFATGAFGRALQSL
Ga0070701_113683951	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VVRPTATGLATAFYRLYLLEALASTTARPATLLAEISSERLPLASGAFGRALQSLLEGGHLVPAAEAAVA
Ga0070694_1007203681	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VVRPAATGLATAFYRLYLLEALASTTARPATLLAEISAERLPLASGAFGRALQSLLE
Ga0070694_1009953372	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTATGLATAFFRLYLLDTLSHAPARPASILAHVAAEKLPFATGAFGRALQSLLEGGHL
Ga0070707_1003541381	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VVRPSATGLATAFYRLYLLESLASTTARPATMLAAISTERLPLASGAFGRALQSLLEGGHLVPAAEAAVALTPLG
Ga0070707_1007246402	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VVRPVATGLATAFFRFYLLESTAAAPARPARMLAAIAAERLPLANGAYGRALQSLIEGGHLCPASDGAV
Ga0070741_100018701	3300005529	Surface Soil	MRSHHGGRALIRPAATGLATAFFRLYLLEALVPAPARPATLLAALAAEHLPLASGGFSRALQALLEGGY
Ga0066661_104693561	3300005554	Soil	MVRAAATGLATAFFRLYLLEGLASGPARPAALLAAIAAERLPFASGAFGRALQSLIEGGYIAP
Ga0066707_109903231	3300005556	Soil	VRPATTGLATAFFRFYLLDTLSSAPARPASVLARVAAEKLPFATGAFGRALQSLLEG
Ga0066704_103669641	3300005557	Soil	MIRPSATGLATAFYRLYLLDSLASAPARPATLLATIAAERLPLANGAFGRALQSL
Ga0066702_104771331	3300005575	Soil	MVRPSATGLATAFFRLYLLESLAAGPSRPAALLAAIAAERLPFASGAFGRALQSLVEGG
Ga0066691_108837562	3300005586	Soil	MVRLSSTGLATAFFRLYLLESLVSGPARPAALLAAIAAERLPFASGAFGRALQSLIEGGYLAPAAAAT
Ga0068859_1031412392	3300005617	Switchgrass Rhizosphere	VVRPAATGLATAFYRLYLLEALASTTARPATLLAEISAERLPLASGAFGRALQSLLEGGHLVPAAE
Ga0070712_1003977602	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTATGLATAFFRLYLLDTLSHAPARPASILAHVAAEKLPFATGAFGRALQSLLEGGHLVPARDGMVALTAL
Ga0066665_100324765	3300006796	Soil	MVRPAATGLATAFFRLYLLDALAVGPARPAALLAAIAAERLPFASGAFGRALQSLLEGGYVTPAQSA
Ga0066665_102947683	3300006796	Soil	VVRPAATGLATAFYRLYLLDALAPEPARPTTLLAKIAAEQLPLASGGFSRALQALLDGGYLAPAAEGAVALTPLGAAERMAERERWKKVLPTA
Ga0066665_112663391	3300006796	Soil	MLRPATTGLATAFFRFYLLDGLSSAPARPASLLTRVAAEKLPFASGAFSRALQSLLEGGYLIP
Ga0075425_1012804971	3300006854	Populus Rhizosphere	VVRPASTGLGTAFFRLYLLETLVAAPSRPATLLAALAGEQLPLTSGGFSRALQALLDGGYLVPAPEGAVALTPVGA
Ga0075425_1029920442	3300006854	Populus Rhizosphere	VVRPAATGLATAFYRLYLLDALAPEPSRPAALLAKIAAEQLPLSSGGFSRALQALLD
Ga0079215_116323282	3300006894	Agricultural Soil	VVRPSATGLATAFYRLYLLDSLVHAPARPATLLATIAGERLPLANGAFGRALQSLLEGGYLVPAPEAAVALTPLGAAERV
Ga0075426_110142232	3300006903	Populus Rhizosphere	VVRPAATGLGTAFFRLYLLEALVAAPSRPAALLAAIAGEQLPLASGGFSRALQGLLD
Ga0075424_1006997802	3300006904	Populus Rhizosphere	VVRPASTGLGTAFFRLYLLETLVAAPSRPATLLAALAGEQLPLTSGGFSRALQALLDGGYLVPAPEGAVALTPV
Ga0075436_1008121262	3300006914	Populus Rhizosphere	MEDVRPASTGLATAFFRLYLLDTLSLGPARPPSILARVAAENLPFAPGAFGRALQSLLEGGHLVPARDGLVALTALGAAERVVERE
Ga0075419_106664281	3300006969	Populus Rhizosphere	MVRPSATGLATAFYRLYLLDSLASAPARPATLLATIATERLPLANGAFGRALQSLLEG
Ga0079218_110214932	3300007004	Agricultural Soil	VVRPSATGLATAFYRLYLLESLASTTARPATLLAAISSERLPLANGAFGRALQSLLDGGHLVPAPEAAVALTP
Ga0099829_104566511	3300009038	Vadose Zone Soil	VVRPAATGLATAFYRLYLLEALATEPARPATLLARVSAERLPLSSGGFSRALQSLLEGGYLVPAPEGAVALTALG
Ga0099827_113748991	3300009090	Vadose Zone Soil	VVRPAATGLATAFYRLFLLEALVTEPARPAALLARIAAERLPLSSGGFSRALQALLDGGYLVPAPEGAVALTPLGAAERM
Ga0066709_1005945713	3300009137	Grasslands Soil	VVRPAATGLATAFYRLYLLDALAPEPARPTTLLAKIAAEQLPLASGGFSRALQALLDGGYLAPAAEGAVALTPLGAAER
Ga0105243_106291781	3300009148	Miscanthus Rhizosphere	VVRPAATGLATAFYRLYLLEALASTTARPATLLAEISSERLPLASGAFGRALQSL
Ga0134109_100170644	3300010320	Grasslands Soil	VLRPAATGLATAFFRLYLLDTLAAGPARPATVLAAIAAERLPFANGAFGRALQSLLDGGY
Ga0134080_104975812	3300010333	Grasslands Soil	MVRPAATGLATAFYRLFLLEALVVEPARPAALLGRIAAEHLPLSSGGFSRALQALLDGGYLVPAPEGAVALT
Ga0151622_10622991	3300011266	Sediment	VVRPAATGLATAFYRLYLLDALAAEPARPTALLARIASERLPLASGGFSRALHSLLEGGYLVACEEGRV
Ga0137391_108013502	3300011270	Vadose Zone Soil	MIRPSATGLATAFYRLYLLDSLASAPARPATLLATIAGERLPLANGAFGRALQSLLEGGYLVPAPEAAVALTPLGAA
Ga0120114_10679641	3300011998	Permafrost	VRPATTGLATAFFRFYLLDTLSCAPARPASILAHVAAEKLPFATGAFGRALQS
Ga0137389_100310941	3300012096	Vadose Zone Soil	MIRPSATGLATAFYRLYLLDSLARAPARPATLLATIAGERRPLANGAFGRALQSLLEGGYLVPAPEAA
Ga0137389_118464211	3300012096	Vadose Zone Soil	MVRPSATGLATAFFRLYLLESLEAGPARPAALLAAVAAERLPFASGAFGRALQSLVEGGYLAPAGG
Ga0137382_101207281	3300012200	Vadose Zone Soil	MVRPSSTGLATAFFRLYLLESLTSGPARPAALLAAIAAERLPFASGAFGRALQSLIEGGYLAPAAAAT
Ga0137399_104333441	3300012203	Vadose Zone Soil	MVRPSATGLATAFFRLYLLESLAAGPARPAALLAAIAAERLPFAAGAFGRALQSLVEG
Ga0137399_108166432	3300012203	Vadose Zone Soil	MVRPAATGLATAFYRLYLLEALAAQPSRPAALLARVAAERLPLSSGGFSRALQSLLEAGISSPRPRARSR*
Ga0137374_108138422	3300012204	Vadose Zone Soil	MVRPASTGLATAFFRFYLLESLAAGPARPATLLARATAERLPFATGAFSRALQSLLEGGHLVPAR
Ga0137381_102116212	3300012207	Vadose Zone Soil	MIRPSATGLATAFYRLYLLDSLASAPARPATLLATIAGERLPLANGAFGRALQSLLEGG
Ga0137378_105465781	3300012210	Vadose Zone Soil	MIRPSATGLATAFYRLYLLDSLASAPARPATLLATIADERLPLANGAFGRALQSLLEGGYLVPAPEAAVALTPLGAA
Ga0137370_106276402	3300012285	Vadose Zone Soil	MIRPSATGLATAFYRLYLLDSLASAPARPATLLATIAGERLPLANGAFGRALQSLLEGGYLVPAPEAAVALTALG
Ga0137368_103079793	3300012358	Vadose Zone Soil	MIRPAATGLATAFYRLYLLDSLASAPARPATLLATIASERLPLANGAFGRALQSLLEGGYLVPAP
Ga0137375_109351602	3300012360	Vadose Zone Soil	MIRPAATGLATAFYRLYLLDSLASAPARPATLLATIAGERLPLANGAFGRALQSLLEGGYLVPAPEAAVALTPLGAA
Ga0137375_110438032	3300012360	Vadose Zone Soil	MVRPATTGLATAFFRFYLLDTLSSAPARPASLLARVAAEKLPFATGAFGRALQSLL
Ga0137373_104442972	3300012532	Vadose Zone Soil	MRPAATGLATAFYRLYLLDSLASAPARPATLLATIAGERLPLANGAFGRALQSLLEGGYVVPAPEAAVALTPL
Ga0137373_109866821	3300012532	Vadose Zone Soil	MIRPAATGLATAFYRLYLLDSLASAPARPATLLATIASERLPLANGAFGRALQSLLEGGYLVPAPEAAVALTP*
Ga0137397_104564932	3300012685	Vadose Zone Soil	MCPLVRPAATGLATAFYRLFLLEALVVEPARPAALLGRISAEHLPLSSGGFSRALQALLEGGYLVPAPEGAIALTPLGAAERMAERERWKNVI
Ga0137410_119157261	3300012944	Vadose Zone Soil	VVRPAATGLATAFYRLYLLDALAREPARPGTLLAKVAAERLPLSSGGFSRALQSLLEGGYLVPAPEGAVALTALGAAERMAERERWSRV
Ga0134077_100531561	3300012972	Grasslands Soil	VVRPSATGLATAFYRLYLLESLASATARPATLLAAISTERLPLASSAFGRALQSLLEGGHLVPAPEAAVALTA
Ga0163162_128211151	3300013306	Switchgrass Rhizosphere	VVRPTATGLATAFYRLYLLEALASTTARPATLLAEISSERLPLASGAFGRALQSLLEGGH
Ga0120147_10199031	3300013758	Permafrost	MRPATTGLATAFFRFYLLDTLSSAPARPASVLARVAAERLSFATRALGRGLPA
Ga0120181_11324621	3300013766	Permafrost	VRPATTGLATAFFRFYLLDTLSRAPARPASILAHVAAEKLPFATGAFGRALQSLLEGGHLVPARDGMVALTVLGAAERVVER
Ga0120173_10003091	3300014031	Permafrost	MLRPATTGLATAFFRLYLLDALVAAPERPAALLARIADAGLPFATGAYGRALQSLLD
Ga0120173_10562381	3300014031	Permafrost	MLRPAATGLATAFFRLYLLDALVAAPERPAALLARIADAGLPFATGAYGRALQSLLDGGHLTPA
Ga0167655_10036561	3300015086	Glacier Forefield Soil	LVRPAATGLATAFYRLYLLDALATEPARPAALLARIAAERLPLSSGGFSRALQGLLEGGYLVAANE
Ga0167652_10069061	3300015164	Glacier Forefield Soil	MRPATTGLATAFFRLYLLDTLSAAPARPASLLARAAAEQLPFATGAFGRALQSLLEGGHLVPARDGMV
Ga0167652_10533702	3300015164	Glacier Forefield Soil	MLRPAATGLATAFFRLYLLDALVAAPDRPAAVLARLADAGLPFATGAFGRALQSLLDGGH
Ga0167629_10043741	3300015209	Glacier Forefield Soil	MLRPASTGLATAFFRLYLLDALACAPDRPATLLGRIAGAGLPFATGAFGRALQSLLDGGHLTPASDGRVALTPLGAAER
Ga0184605_101517052	3300018027	Groundwater Sediment	MVRPSATGLATAFFRLYLLESLAAGPARPATLLAAIAAERLPFAAGAFGRALQSLVEGGYLAP
Ga0184637_105837561	3300018063	Groundwater Sediment	VVRPSATGLATAFYRLYLLESLASTTARPATLLAAISAERLPLASGAFGRALQSLLEGGH
Ga0184640_100462392	3300018074	Groundwater Sediment	VVRPSATGLATAFYRLYLLESLASTTARPATLLAAISAERLPLASGAFGRALQSLLEGGHLVPAPEARVALTPLGAAERLSERERW
Ga0184609_104108642	3300018076	Groundwater Sediment	GMIRPSATGLATAFYRLYLLESLAMTTARPATLLAAISTERLPLASGAFGRALQSLLEGGHLVPAPEAAVALTPLGASERIAERER
Ga0184612_103963472	3300018078	Groundwater Sediment	MVRPSATGLATAFYRLYLLDSLATAPARPATMLATIASERLPLASGAFGRALQSLLEGGYLVPAPEAAVA
Ga0066669_109853422	3300018482	Grasslands Soil	MIRPSATGLATAFYRLYLLDSLASAPARPATLLATIAGERLPLANGAFGRALQSLLEGGYLVPAPEAAVALTALGAAE
Ga0066669_121088602	3300018482	Grasslands Soil	VSRPLSTGLATAFFRLYLLDALARGPARPAVLLAAIAAEGLPFAPGAFGRAVQSLLEGGHIAPAALGNVSLTMLGAAECAVERERW
Ga0207692_108916001	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VATGLATAFFRFYLLDTLSRAPARPASILAHVAAEKLPFATGAFGRALQSLLEGG
Ga0207667_117054761	3300025949	Corn Rhizosphere	VRPATTGLATAFFRFYLLDTLSREPARPASILAHVAAEKLPFATGAFGRALQSLLEGG
Ga0209268_11112842	3300026314	Soil	MVRPSATGLATAFFRLYLLESLVSGPARPAALLAAIAAERLPFASGAFGRALQSLIERGYLAPAA
Ga0209154_10041061	3300026317	Soil	VSRPLSTGLATAFFRLYLLDALARGPARPAVLLAAIAAEGLPFAPGAFGRAVQSLLEGGHIAPAALGNVSLTML
Ga0209472_13132242	3300026323	Soil	MIRPSATGLATAFYRLYLLDSLASAPARPATLLATIAGERLPLANGAFGRALQSLLEGGYLVPAPEAAVALTALGAAERVAERERW
Ga0209266_12671742	3300026327	Soil	VVRPAATGLATAFYRLYLLDALAPEPARPTTLLAKIAAEQLPLASGGFSRALQALLDG
Ga0209802_10100561	3300026328	Soil	MVRPAATGLATAFFRLYLLDALAVGPARPAALLAAIAAERLPFASGAFGRALQSLLEGGY
Ga0209802_12413392	3300026328	Soil	VSRPLSTGLATAFFRLYLLDALARGPARPAVLLAAIAAEGLPFAPGAFGRAVQSLLEGGHIAPAALGNVSLTMLGAAECAVERERWS
Ga0209159_10852362	3300026343	Soil	MIRPSATGLATAFYRLYLLDSLASAPARPATLLATIAGERLPLANGAFGRALQSLLEGGYLVPAPEAAVALTALGAAERVAER
Ga0209160_10541861	3300026532	Soil	VSRPLSTGLATAFFRLYLLDALARGPARPAVLLAAIAAEGLPFAPGAFGRAVQSLLEGGHIAPAALGNVSLTMLGA
Ga0209474_107472311	3300026550	Soil	VVRPAMTGLGTAFFRLYLLEALVPAPARPAALLAAISAERLPLSSGGFSRALQALLAG
Ga0207503_10142722	3300026861	Soil	VVRPAATGLATAFYRLYLLEALASTTARPATLLAEISSERLPLASGAFGRALQSLLEGGHLV
Ga0209485_12288501	3300027691	Agricultural Soil	VVRPSATGLATAFYRLYLLESLASTTARPATLLATIAAERLPLASGAFGRALQSLLEGGHLVPAPEAAVALTPLGAAE
Ga0209073_103437911	3300027765	Agricultural Soil	VVRPAATGLGTAFFRLYLLETLVPAPSRPAALLAAIASEQLPLSSGGFSRALQGLLDGGYVVPAPEGAVALTPLGAAERLAERE
Ga0209486_102683681	3300027886	Agricultural Soil	VVRPSATGLATAFYRLYLLESLASTTARPATLLATIAHERLPLASGAFGRALQSLLEGGHLVPAPEAAVALTPLGAAER
Ga0307282_106354201	3300028784	Soil	VRPATTGLATAFFRFYLLDTLSAKPERPASLLARVAAEKLPFATGAFGRALQSLLEGGHLTP
Ga0307284_103249862	3300028799	Soil	LSLFLSPPSEGTTVRPTATGLATAFFRLYLLESLVLGGARPAALLAAIAAERLPFAAGAFGRALQSLVEGGYLAPGAGATVCLTALG
Ga0307302_103265311	3300028814	Soil	MVRAAATGLATAFFRLYLLEGLVPGPARPAALLAAIAAERLPFASGAFGRALQSLIEGGYLVPAPAATVSLTAL
Ga0307310_102953512	3300028824	Soil	VRPTATGLATAFFRFYLLDALSHAPARPASILAHVAAEKLPFATGAFGRALQSLLEGGHLVPARDG
Ga0307312_107416362	3300028828	Soil	MVRPSATGLATAFFRLYLLESLAPGPARPAALLAAIAAERLPFASGAFGRALQSLIEGGYLAPAA
Ga0310813_105587861	3300031716	Soil	VRPATTGLATAFFRFYLLDTLSREPARPASILAHVAAEKLPFATGAFGRALQSLLEGGHLVPARDGMVTLTALGAAERVAERERWS
Ga0307468_1012175702	3300031740	Hardwood Forest Soil	VVRPAATGLATAFYRLYLLDALATQPARPQALLGRIAAERLPLSSGGFSRALQSLLEGGYLIPADEGAV
Ga0364926_103851_366_587	3300033812	Sediment	MVRPSATGLATAFYRLYLLESLASTTARPATLLAAISVERLPLASGAFGRALQSLLEGGHLVPAPEAAVALTPL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103675

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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