Metagenome / Metatranscriptome Family F103612

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103612
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	54 residues
Representative Sequence	LTGFAAVGIDPQHFNLQAGIGATLRIGAAAALINAVIGVAAYLQKSPLPEE
Number of Associated Samples	89
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.92 %
% of genes near scaffold ends (potentially truncated)	90.10 %
% of genes from short scaffolds (< 2000 bps)	90.10 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.743 % of family members)
Environment Ontology (ENVO)	Unclassified (30.693 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.535 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.04% β-sheet: 0.00% Coil/Unstructured: 56.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF14384	BrnA_antitoxin	3.96
PF04365	BrnT_toxin	2.97
PF14317	YcxB	0.99
PF07238	PilZ	0.99
PF01464	SLT	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	2.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	98.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	88.12 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	88.12 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10107664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1186	Open in IMG/M
3300001593\|JGI12635J15846_10546510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300001867\|JGI12627J18819_10495840	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300002914\|JGI25617J43924_10175536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300002914\|JGI25617J43924_10202930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300003218\|JGI26339J46600_10002576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5490	Open in IMG/M
3300004635\|Ga0062388_102263355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300005174\|Ga0066680_10897238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300005332\|Ga0066388_107656367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300005439\|Ga0070711_101992259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300005526\|Ga0073909_10304580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300005556\|Ga0066707_10789897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300005561\|Ga0066699_10032974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3023	Open in IMG/M
3300005568\|Ga0066703_10169577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1317	Open in IMG/M
3300005586\|Ga0066691_10419077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300005610\|Ga0070763_10851273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300006176\|Ga0070765_100325701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1424	Open in IMG/M
3300009038\|Ga0099829_10572857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300009088\|Ga0099830_10191836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1595	Open in IMG/M
3300009088\|Ga0099830_10831757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300009089\|Ga0099828_10786404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300009518\|Ga0116128_1050773	All Organisms → cellular organisms → Bacteria → Acidobacteria	1309	Open in IMG/M
3300009524\|Ga0116225_1417581	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300009683\|Ga0116224_10070462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1703	Open in IMG/M
3300010320\|Ga0134109_10068875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1197	Open in IMG/M
3300010341\|Ga0074045_10006407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10110	Open in IMG/M
3300010359\|Ga0126376_10453647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1172	Open in IMG/M
3300010361\|Ga0126378_10948401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300011269\|Ga0137392_10213734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1580	Open in IMG/M
3300011270\|Ga0137391_10770260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300012096\|Ga0137389_10104161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2260	Open in IMG/M
3300012189\|Ga0137388_10697025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300012189\|Ga0137388_11061946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300012207\|Ga0137381_10610226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300012210\|Ga0137378_10482330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1146	Open in IMG/M
3300012210\|Ga0137378_11565731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300012362\|Ga0137361_11311109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300012363\|Ga0137390_11458962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300012685\|Ga0137397_10556349	All Organisms → cellular organisms → Bacteria → Acidobacteria	854	Open in IMG/M
3300012922\|Ga0137394_10783710	All Organisms → cellular organisms → Bacteria → Acidobacteria	800	Open in IMG/M
3300012922\|Ga0137394_11218906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300012925\|Ga0137419_11947745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300012929\|Ga0137404_11993488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300012930\|Ga0137407_11081522	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300012931\|Ga0153915_11399741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300012948\|Ga0126375_12099239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300012964\|Ga0153916_11051052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300012964\|Ga0153916_12390341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300015054\|Ga0137420_1433975	All Organisms → cellular organisms → Bacteria → Acidobacteria	1849	Open in IMG/M
3300015358\|Ga0134089_10072511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1287	Open in IMG/M
3300017927\|Ga0187824_10292377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300017931\|Ga0187877_1061816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1663	Open in IMG/M
3300017934\|Ga0187803_10206428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300017935\|Ga0187848_10000012	All Organisms → cellular organisms → Bacteria	154445	Open in IMG/M
3300017944\|Ga0187786_10125168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300018085\|Ga0187772_10506363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300018088\|Ga0187771_10726805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300020580\|Ga0210403_10493447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300020580\|Ga0210403_11076791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300020581\|Ga0210399_10053767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3238	Open in IMG/M
3300020583\|Ga0210401_11024599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300021046\|Ga0215015_10339093	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045	Open in IMG/M
3300021170\|Ga0210400_11241577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300021171\|Ga0210405_10002803	All Organisms → cellular organisms → Bacteria → Acidobacteria	17711	Open in IMG/M
3300021181\|Ga0210388_10125198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2218	Open in IMG/M
3300021401\|Ga0210393_10482522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300021475\|Ga0210392_10911182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300021559\|Ga0210409_10287518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1483	Open in IMG/M
3300024330\|Ga0137417_1233312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300025439\|Ga0208323_1072131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300026530\|Ga0209807_1059213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1742	Open in IMG/M
3300027605\|Ga0209329_1090514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300027651\|Ga0209217_1180839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300027663\|Ga0208990_1066929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300027671\|Ga0209588_1255113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300027674\|Ga0209118_1114020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300027765\|Ga0209073_10480437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300027821\|Ga0209811_10339008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300027862\|Ga0209701_10260828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300027862\|Ga0209701_10416329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300027862\|Ga0209701_10569170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300027867\|Ga0209167_10376485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300027898\|Ga0209067_10958371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300029636\|Ga0222749_10149130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300030053\|Ga0302177_10126046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1462	Open in IMG/M
3300031233\|Ga0302307_10426904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300031718\|Ga0307474_10396772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300031720\|Ga0307469_10859362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300031720\|Ga0307469_11193142	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300031753\|Ga0307477_10130927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1750	Open in IMG/M
3300031754\|Ga0307475_10016592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5063	Open in IMG/M
3300031823\|Ga0307478_10569501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300031962\|Ga0307479_10272021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1674	Open in IMG/M
3300031962\|Ga0307479_10588767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300032180\|Ga0307471_101976660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300032770\|Ga0335085_11041527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300032770\|Ga0335085_11852674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300032782\|Ga0335082_10309660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1451	Open in IMG/M
3300032893\|Ga0335069_11016028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300032897\|Ga0335071_11794653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300033983\|Ga0371488_0021229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4738	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.12%
Aquatic	Environmental → Aquatic	11.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.15%
Freshwater	Environmental → Aquatic → Freshwater	10.89%
Peat	Environmental → Terrestrial → Peat	2.97%
Sediment	Environmental → Aquatic → Sediment	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.89%
Loam	Environmental → Terrestrial → Soil → Loam	9.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.92%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.97%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.95%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.97%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.98%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.98%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025439	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101076642	3300000567	Peatlands Soil	SGAAGGVMTGLAAVGIDPGHFNLQAGMGATVKIGVAAAVINAVIGVAAYLQKSPLPDEGESK*
JGI12635J15846_105465103	3300001593	Forest Soil	GAAGGVLTGLAAVGIDPQHFNLQTGIGATFRIGAAAALINAVIGVAAYLQKSPLPET*
JGI12627J18819_104958402	3300001867	Forest Soil	GLAAVGIDPQHFNLQAGIGATLRIGAAAALINAVIGVAAYLQKSPLPEEGK*
JGI25617J43924_101755362	3300002914	Grasslands Soil	AISGAAGGVLTGLAAVGIDPQHFNLQAGMAATLRIGAAAALINAVIGVAAYLQKSPLPEETK*
JGI25617J43924_102029303	3300002914	Grasslands Soil	GFAAVGIDPQHFNLQSGSGATLRIGAAAALINAVIGVAAYLQKSPLPTE*
JGI26339J46600_100025763	3300003218	Bog Forest Soil	MTGLAAVGIDPAHFNLRAGMGATVRIGAAAALINAVIGVAAYLQKSPLPDE*
Ga0062388_1022633551	3300004635	Bog Forest Soil	GGVLTGLAAVGIDPQHFNLQTGMGATLHIGAAAALINAVIGVAAYLQKSPLPDS*
Ga0066680_108972382	3300005174	Soil	FAAVGIDPQHFNLQSGIGATLRIGAAAALINAVIGVAAYLQKSPLPEE*
Ga0066388_1076563671	3300005332	Tropical Forest Soil	GGVMTGLAAVGIDPAHFNLQAGMGATVRIAAAAALINAIIGVAAYLQKSPLPDS*
Ga0070711_1019922592	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AGGVLTGLAAVGIDPQHFNLQTGMGATMRIGAAAALINAVIGVAAYLQKSPLPET*
Ga0073909_103045801	3300005526	Surface Soil	LTGFAAVGIDPQHFNLQSGTGATLRIAVAAALINAVIGVAAYLQKSPLPND*
Ga0066707_107898971	3300005556	Soil	GGVLTGFAAVGIDPQHFNLQAGIGATLKIAAAAELINAVIGVAAYLQKSPLPTE*
Ga0066699_100329746	3300005561	Soil	SGAAGGVLTGFAAVGIDPQHFNLQAGMGATMRIAAAAALINAVIGVAAYLQKSPLPTE*
Ga0066703_101695773	3300005568	Soil	GFAAVGIDPQHFNLQAGIGATLRIAAAAALINAVIGVAAYLQKSPLPQD*
Ga0066691_104190771	3300005586	Soil	AGGVLTGFAAVGIDPQHFNLQAGIGATLRIAAAAALINAVIGVAAYLQKSPLPQDSV*
Ga0070763_108512732	3300005610	Soil	LTGLAAVGIDPQHFNLQAGMGATTRIGAAAALINAVIGVAAYLQKSPLPSGD*
Ga0070765_1003257013	3300006176	Soil	GVSGAAGGVMTGLAAVGIDPGHFNLQAGMGATVRIGAAAALINAVIGVAAYLQKSPLPGE
Ga0099829_105728571	3300009038	Vadose Zone Soil	AAVGIDPQHFNLQAGIGATFRIGAAAAVINAVIGVAAYLQKSPLPE*
Ga0099830_101918363	3300009088	Vadose Zone Soil	VLTGLAAVGIDPQHFNLQAGMAATLRIAAAAALINAVIGVAAYLQKSPLPSGD*
Ga0099830_108317571	3300009088	Vadose Zone Soil	ISGAAGGVLTGLAAVGIDPQHFNLQSGIGATFRIGVAAALINAVIGVAAYLQKSPLPEA*
Ga0099828_107864041	3300009089	Vadose Zone Soil	LTGFAAVGIDPQHFNLQSGIGATFRIGVAAALINAVIGVAAYLQKSPLPEEAK*
Ga0116128_10507732	3300009518	Peatland	MTGLAAVGIDPAHFNLQAGMGATVRIGAAAALINAVIGVAAYLQKSPLPEE*
Ga0116225_14175812	3300009524	Peatlands Soil	MTGLAAVGIDPAHFNLQAGLGATVRIGAAAALINAVIGVAAYLQKSPLPDV*
Ga0116224_100704623	3300009683	Peatlands Soil	AAGGVLTGLAAVGIDPAHFNLQAGMGATVRIGAAAALINAVIGVAAYLQKSPLPEE*
Ga0134109_100688751	3300010320	Grasslands Soil	LTGFAAVGIDPQHFNLQAGIGATLRIAAAAALINAVIGVAAYLQKSPLPQDSV*
Ga0074045_100064071	3300010341	Bog Forest Soil	GIDPGHFNLQAGMGATVKIGTAAALINAVIGVAAYLQKSPLPGDGESKQV*
Ga0126376_104536471	3300010359	Tropical Forest Soil	AAGGVLTGFAAVGIDPAHFNLQAGIGATFRIGMAAALINAIIGVAAYLQKSPLPEGN*
Ga0126378_109484012	3300010361	Tropical Forest Soil	GAGGILTGFAAVGIDPQHFNLQAGMGATMHIGVAAALINAVVGVAAYLQKSPLPVE*
Ga0137392_102137341	3300011269	Vadose Zone Soil	AGGVLTGLAAVGIDPQHFNLQSGIGATFRIGVAAALINAVIGVAAYLQKSPLPEA*
Ga0137391_107702602	3300011270	Vadose Zone Soil	LTGFAAVGIDPQHFNLQSGIGATLRIGAAAALINAVIGVAAYLQKSPLPSGD*
Ga0137389_101041613	3300012096	Vadose Zone Soil	MTGFAAVGIDPVHFNLQAGIGSTMRIGAAAALINAVIGVAAYLQKSPLPGSDS*
Ga0137388_106970251	3300012189	Vadose Zone Soil	MTGLAAVGIDPGHFNLQAGMGATVRIGAAAALINAVIGVAAYLQKSPLPEG*
Ga0137388_110619462	3300012189	Vadose Zone Soil	AGGILTGFAAVGIDPQHFNLQAGIGATLRIGTAAALINAVIGVAAYLQKSPLPEEVK*
Ga0137381_106102261	3300012207	Vadose Zone Soil	AAISGAAGGVLTGFAAVGIDPQHFNLQSGVGATLRIAAAAALINAVIGVAAYLQKSPLPEE*
Ga0137378_104823301	3300012210	Vadose Zone Soil	TGFAAVGIDPQHFNLQAGIGATMRIAAAAALINAVIGVAAYLQKSPLPTE*
Ga0137378_115657311	3300012210	Vadose Zone Soil	GGVLTGLAAVGIDPQHFNLQSGIGATMRIGAAAAFINAVIGVAAYLQKSPLPTE*
Ga0137361_113111091	3300012362	Vadose Zone Soil	SGAAGGVLTGLAAVGIDPQHFNLQSGIGATSRIGAAAALINAVIGVAAYLQKSPLPEA*
Ga0137390_114589623	3300012363	Vadose Zone Soil	AAVGIDPQHFNLQSGIGATMRIGAAAAFINAVIGVAAYLQKSPLPTE*
Ga0137397_105563491	3300012685	Vadose Zone Soil	LTGFAAVGIDPQHFNLQSGIGATFRIGAAAALINAVIGVAAYLQKSPLPEETK*
Ga0137394_107837102	3300012922	Vadose Zone Soil	MLAAGVSGAAGGVMTGLAAVGIDPGHFNLQAGIGATMRIGAAAALINAVIGVAAYLQKSP
Ga0137394_112189062	3300012922	Vadose Zone Soil	AGGVLTGFAAVGIDPQHFNLQSGIGATFRIGAAAALINAVIGVAAYLQKSPLPSGD*
Ga0137419_119477451	3300012925	Vadose Zone Soil	AAISGAAGGVLTGLAAVGIDPQHFNLQSGIGATSRIGAAAALINAVIGVAAYLQKSPLPEA*
Ga0137404_119934882	3300012929	Vadose Zone Soil	VLTGFAAVGIDPQHFNLQSGSGATLRIAAAAALINAVIGVAAYLQKSPLPAE*
Ga0137407_110815223	3300012930	Vadose Zone Soil	AAVGIDPQHFNLQSGMGATFRIGVAAALINAVIGVAAYLQKSPLPEEAK*
Ga0153915_113997412	3300012931	Freshwater Wetlands	AAVGIDPQHFNLQAGIGATLRIGAAAALINAVIGVAAYLQKSPLPEE*
Ga0126375_120992392	3300012948	Tropical Forest Soil	GGAGGILTGFAAVGIDPQHFNLQAGIGATMRIGCAAALINAVIGVAAYLQKSPLPAE*
Ga0153916_110510522	3300012964	Freshwater Wetlands	FAAVGIDPQHFNLQAGIGATLRIGAAAALINAVIGVAAYLQKSPLPEE*
Ga0153916_123903411	3300012964	Freshwater Wetlands	LTGFAAVGIDPQHFNLQAGIGATLRIGAAAALINAVIGVAAYLQKSPLPEE*
Ga0137420_14339753	3300015054	Vadose Zone Soil	VLTGFAAVGIDPQHFNLQAGIGSTLRIGVAAAVINAVIGVAAYLQKSPLPNGD*
Ga0134089_100725111	3300015358	Grasslands Soil	LTGFAAVGIDPQHFNLQAGIGATLRIAAAAALINAVIGVAAYLQKSPLPQD*
Ga0187824_102923771	3300017927	Freshwater Sediment	LAAVGIDPAHFNLQTGIGSTLRIGLAAAAINAIIGVAAYLQKSPLPQGDM
Ga0187877_10618163	3300017931	Peatland	MTGLAAVGIDPAHFNLQAGMGATVRIGAAAALINAVIGVAAYLQKSPLPEE
Ga0187803_102064281	3300017934	Freshwater Sediment	GVMTGLAAVGIDPAHFNLQAGMGATVRIGTAAALINAVIGVAAYLQKSPLPDSN
Ga0187848_1000001257	3300017935	Peatland	MTGLAAVGIDPAHFNLQAGMGATVRIGMAAALINAVIGVAAYLQKSPLPDE
Ga0187786_101251682	3300017944	Tropical Peatland	SGASGGVMTGLAAVGIDPGHFNLQAGIGATVRIAIAAALINAVIGVAAYLQKSPLPA
Ga0187772_105063632	3300018085	Tropical Peatland	LAAVGIDPAHFNLQAGIGATAKIGAAAALINAVIGVAAYLQKSPLPEEGSKAS
Ga0187771_107268051	3300018088	Tropical Peatland	GISGAAGGVLTGLAAVGIDPAHFNLQAGMGATVKIGAAAALINAVIGVAAYLQKSPLPEEGK
Ga0210403_104934471	3300020580	Soil	GVLTGFAAVGIDPQHFNLQSGIAATFRIGAAAAVINAVIGVAAYLQKSPLPSGD
Ga0210403_110767912	3300020580	Soil	GVSGAAGGVMTGLAAVGIDPGHFNLQAGMGATVRIGTAAALINAVIGVAAYLQKSPLPEG
Ga0210399_100537674	3300020581	Soil	AGGVMTGLAAVGIDPGHFNLQAGIGATMRIGAAAALINAVIGVAAYLQKSPLPEG
Ga0210401_110245992	3300020583	Soil	AAGVSGAAGGVMTGLAAVGIDPGHFNLQAGMGATVRIGAAAAFINAVIGVAAYLQKSPLPAD
Ga0215015_103390932	3300021046	Soil	MCIRDRAISGAAGGVLTGLAAVGIDPQHFNLQTGGGATFRIGAAAALINAVIGVAAYLQKSPLPAE
Ga0210400_112415773	3300021170	Soil	LTGFAAAGIDPQHFNLQSGIGATMRIGAAAALINAVIGVAAYLQKSPLPSE
Ga0210405_1000280318	3300021171	Soil	AGGVMTGLAAVGIDPGHFNLQAGMGATVRIGAAAALINAVIGVAAYLQKSPLPGE
Ga0210388_101251981	3300021181	Soil	SGGAGGVLTGFAAVGIDPQHFNLQTGIGATLRIAAAAALINAVIGVAAYLQKSPLPSD
Ga0210393_104825222	3300021401	Soil	AGGGVMRGLAAVGIDPGHFNLQAGMGATVRIGAAAALINAVIGVAAYLQKSPLPGE
Ga0210392_109111821	3300021475	Soil	TGLAAVGIDPGHFNLQAGMGATVRIGAAAALINAVIGVAAYLQKSPLPEG
Ga0210409_102875184	3300021559	Soil	AAVGIDPQHFNLQSGSGATLRIAAAAALINAVIGVAAYLQKSPLPTE
Ga0137417_12333123	3300024330	Vadose Zone Soil	VLTGFAAVGIDPQHFNLQAGIGATLRIAAAAALINAVIGVAAYLQKSPLPTE
Ga0208323_10721312	3300025439	Peatland	GVMTGLAAVGIDPAHFNLQAGMGATVRIGAAAALINAVIGVAAYLQKSPLPEE
Ga0209807_10592134	3300026530	Soil	FAAVGIDPQHFNLQAGIGATLRIAAAAALINAVIGVAAYLQKSPLPQD
Ga0209329_10905143	3300027605	Forest Soil	AGGVLTGLAAVGIDPQHFNLQAGIGATFRIGAAAALINAVIGVAAYLQKSPLPAE
Ga0209217_11808392	3300027651	Forest Soil	AVSGGAGGVLTGLAAVGIDPQHFNLQTGIGATMRIGAAAAMINALIGVAAYLQKSPLPE
Ga0208990_10669293	3300027663	Forest Soil	GGVLTGFAAVGIDPQHFNLQAGIGATLRIAAAAALINAVIGVAAYLQKSPLPTE
Ga0209588_12551131	3300027671	Vadose Zone Soil	AAVGIDPQHFNLQSGIGATMRIGAAAALINAVIGVAAYLQKSPLPDEAK
Ga0209118_11140202	3300027674	Forest Soil	GLAAVGIDPGHFNLQAGMGATVRIGAAAALINAVIGVAAYLQKSPLPEG
Ga0209073_104804372	3300027765	Agricultural Soil	AGGILTGFAAVGIDPQHFNLQAGIGATMRIAAAAALINAVIGVAAYLQKSPLPQDGV
Ga0209811_103390081	3300027821	Surface Soil	LTGFAAVGIDPQHFNLQSGTGATLRIAVAAALINAVIGVAAYLQKSPLPND
Ga0209701_102608281	3300027862	Vadose Zone Soil	AAGGVLTGLAAVGIDPQHFNLQSGIGATFRIGSAAALINAVIGVAAYLQKSPLPPGD
Ga0209701_104163291	3300027862	Vadose Zone Soil	AISGAAGGVLTGFAAVGIDPQHFNLQSGSGATLRIGAAAALINAVIGVAAYLQKSPLPTE
Ga0209701_105691702	3300027862	Vadose Zone Soil	GLAAVGIDPQHFNLQSGSGATLRIGTAAALINAVIGVAAYLQKSPLPSE
Ga0209167_103764852	3300027867	Surface Soil	ISGAAGGILTGFAAVGIDPQHFNLQSGMRETMRMGAAAALINAVIGVAAYLQKSPLPND
Ga0209067_109583711	3300027898	Watersheds	TGFAAVGIDSQHFNLQAGMGATMRIAAAAALINAVIGVAAYLQKSPLPEDGV
Ga0222749_101491302	3300029636	Soil	AGISGAGGGVLTGLAAVGIDPQHFNLQAGMGATMRIGAAAALINAVIGVAAYLQKSPLPG
Ga0302177_101260463	3300030053	Palsa	SGAAGGVLTGFAAVGIDPQHFNLQSGVSATLHIAEAAALINAIIGVAAYLQKSPLPDS
Ga0302307_104269041	3300031233	Palsa	GGLLTGFAAVGIDPQHFNLQAGLGATFHIGEAAALINAVIGVAAYLQKSPLPE
Ga0307474_103967722	3300031718	Hardwood Forest Soil	LTGLAALGIDPQHFNLQTGIGATFRIGAAAALINAVIGVAAYLQKSPLPET
Ga0307469_108593622	3300031720	Hardwood Forest Soil	TGLAAVGIDPQHFNLQSGIGATFRIGAAAALINAVIGVAAYLQKSPLPSGD
Ga0307469_111931422	3300031720	Hardwood Forest Soil	GAAGGVLTGLAAVGIDPQHFNLQSGIGATFRIGAAAALINAVIGVAAYLQKSPLPAE
Ga0307477_101309274	3300031753	Hardwood Forest Soil	AISGAAGGVLTGLAALGIDPQHFNLQTGIGATFRIGAAAALINAVIGVAAYLQKSPLPET
Ga0307475_100165922	3300031754	Hardwood Forest Soil	VLTGFAAVGIDPQHFNLQSGIGATLRIGAAAALINAVIGVAAYLQKSPLPSE
Ga0307478_105695013	3300031823	Hardwood Forest Soil	GGILTGFAAVGIDPQHFNLQAGIRATLRIAVAAALINAVIGVAAYLQKSPLPTE
Ga0307479_102720214	3300031962	Hardwood Forest Soil	LTGLAAVGIDPQHFNLQSGIGATFRIGAAAALINAVIGVAAYLQKSPLPEE
Ga0307479_105887673	3300031962	Hardwood Forest Soil	GGVLTGFAAVGIDPQHFNLQAGMGATLRIAEAAALINAVIGVAAYLQKSPLPSE
Ga0307471_1019766602	3300032180	Hardwood Forest Soil	GGAGGILTGFAAVGIDPQHFNLQSGMGATFRIGAAASLINAVIGVAAYLQKSPLPSGD
Ga0335085_110415271	3300032770	Soil	IDPQHFNLQAGVGATARIGAAAAMINAVIGVAAYLQKSPLPDRDERRP
Ga0335085_118526742	3300032770	Soil	TGLAAVGIDPGHFNLQAGMGATVRIGAAAALINAAIGVAAYLQKSPLPGDEAKI
Ga0335082_103096601	3300032782	Soil	VSGGAGGVMTGLAAVGIDPGHFNLQAGMGATVRIGAAAALINAAIGVAAYLQKSPLPGDEAKI
Ga0335069_110160281	3300032893	Soil	AVGIDPGHFNLQAGMGATVRIGAAAALINAAIGVAAYLQKSPLPGDEAKI
Ga0335071_117946531	3300032897	Soil	VLTGFAAVGIDPQHFNLQSGMRETLRMGAAAALINSIIGVAAYLQKSPMPPSGDS
Ga0371488_0021229_2033_2188	3300033983	Peat Soil	MTGLAAVGIDPAHFNLQAGMGATVRIGAAAALINAVIGVAAYLQKSPLPDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103612

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences