NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F103517

Metagenome / Metatranscriptome Family F103517

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103517
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 117 residues
Representative Sequence MNKKEVLDTTAGMMKKMVSYDEVETVTQRSVMRGMENGTKLMIEEKERVNKLINDILSSLDYRDVLDKVTEDTFDAFVFRYFKNVKYLADLEADDIELPDMVPENSFSVWAAVMLIDIDCL
Number of Associated Samples 59
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 77.23 %
% of genes near scaffold ends (potentially truncated) 32.67 %
% of genes from short scaffolds (< 2000 bps) 85.15 %
Associated GOLD sequencing projects 49
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(31.683 % of family members)
Environment Ontology (ENVO) Unclassified
(37.624 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(31.683 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 57.72%    β-sheet: 1.34%    Coil/Unstructured: 40.94%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.259.1.1: Hypothetical protein HI1480d1mw5a11mw50.67114
a.227.1.1: ERO1-liked3m31a13m310.52875
a.69.1.2: C-terminal domain of A and B subunits of V1 ATP synthase and A1 ATP sythased1vdza31vdz0.50659
c.1.12.3: Phosphoenolpyruvate carboxylased1jqna_1jqn0.50612
e.8.1.1: DNA polymerase Id1s5ja21s5j0.50221


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF03279Lip_A_acyltrans 37.62
PF13186SPASM 17.82
PF13654AAA_32 2.97
PF03358FMN_red 2.97
PF05362Lon_C 1.98
PF13447Multi-haem_cyto 0.99
PF02915Rubrerythrin 0.99
PF13598DUF4139 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG1560Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)Lipid transport and metabolism [I] 37.62
COG4261Predicted acyltransferase, LPLAT superfamilyGeneral function prediction only [R] 37.62
COG0466ATP-dependent Lon protease, bacterial typePosttranslational modification, protein turnover, chaperones [O] 1.98
COG1067Predicted ATP-dependent proteasePosttranslational modification, protein turnover, chaperones [O] 1.98
COG1750Predicted archaeal serine protease, S18 familyGeneral function prediction only [R] 1.98
COG3480Predicted secreted protein YlbL, contains PDZ domainSignal transduction mechanisms [T] 1.98


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001213|JGIcombinedJ13530_101962817All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1967Open in IMG/M
3300001213|JGIcombinedJ13530_106179462All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium568Open in IMG/M
3300002220|MLSBCLC_10485020All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1876Open in IMG/M
3300003995|Ga0055438_10264739All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium534Open in IMG/M
3300004009|Ga0055437_10103145All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium843Open in IMG/M
3300004024|Ga0055436_10031749All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1355Open in IMG/M
3300004024|Ga0055436_10248152All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium567Open in IMG/M
3300004057|Ga0055496_10075697All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium763Open in IMG/M
3300004057|Ga0055496_10085148All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium729Open in IMG/M
3300004070|Ga0055488_10086023All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum745Open in IMG/M
3300004266|Ga0055457_10183884All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium608Open in IMG/M
3300006224|Ga0079037_100033033All Organisms → cellular organisms → Bacteria3854Open in IMG/M
3300006224|Ga0079037_100548652All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum1115Open in IMG/M
3300006224|Ga0079037_101063864All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum802Open in IMG/M
3300009053|Ga0105095_10187541All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1133Open in IMG/M
3300009078|Ga0105106_10146912All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1731Open in IMG/M
3300009078|Ga0105106_10450767All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium926Open in IMG/M
3300009087|Ga0105107_10004572All Organisms → cellular organisms → Bacteria → Nitrospirae → Thermodesulfovibrionia → Thermodesulfovibrionales → Thermodesulfovibrionaceae → Thermodesulfovibrio → Thermodesulfovibrio islandicus9271Open in IMG/M
3300009087|Ga0105107_10648641All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium735Open in IMG/M
3300009091|Ga0102851_10100590All Organisms → cellular organisms → Bacteria → Nitrospirae2504Open in IMG/M
3300009091|Ga0102851_10155053All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae2089Open in IMG/M
3300009091|Ga0102851_10325924All Organisms → cellular organisms → Bacteria1514Open in IMG/M
3300009091|Ga0102851_11235641All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum823Open in IMG/M
3300009091|Ga0102851_13364562All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium513Open in IMG/M
3300009111|Ga0115026_10090336All Organisms → cellular organisms → Bacteria → Nitrospirae1838Open in IMG/M
3300009111|Ga0115026_10169111All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1429Open in IMG/M
3300009111|Ga0115026_11132845All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium633Open in IMG/M
3300009111|Ga0115026_11153291All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium628Open in IMG/M
3300009111|Ga0115026_11574683All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium549Open in IMG/M
3300009131|Ga0115027_10000495All Organisms → cellular organisms → Bacteria → Nitrospirae → Thermodesulfovibrionia → Thermodesulfovibrionales → Thermodesulfovibrionaceae → Thermodesulfovibrio → Thermodesulfovibrio islandicus7829Open in IMG/M
3300009131|Ga0115027_10152992All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1414Open in IMG/M
3300009131|Ga0115027_10549200All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum841Open in IMG/M
3300009153|Ga0105094_10294863All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium934Open in IMG/M
3300009166|Ga0105100_10158102All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1345Open in IMG/M
3300009167|Ga0113563_10883037All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1020Open in IMG/M
3300009179|Ga0115028_10486786All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium893Open in IMG/M
3300009296|Ga0103681_1047539All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium2245Open in IMG/M
3300012931|Ga0153915_10444403All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1475Open in IMG/M
3300012931|Ga0153915_10968795All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium990Open in IMG/M
3300012964|Ga0153916_10274346All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1713Open in IMG/M
3300012964|Ga0153916_10372484All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum1481Open in IMG/M
3300014165|Ga0181523_10440755All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium723Open in IMG/M
3300014270|Ga0075325_1183706All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium549Open in IMG/M
3300014271|Ga0075326_1077155All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum916Open in IMG/M
3300014885|Ga0180063_1211365All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum623Open in IMG/M
3300014885|Ga0180063_1279905All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium531Open in IMG/M
3300015256|Ga0180073_1036636All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034969Open in IMG/M
3300018059|Ga0184615_10005401All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae6888Open in IMG/M
3300018059|Ga0184615_10294463All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium906Open in IMG/M
3300018070|Ga0184631_10089707All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum1186Open in IMG/M
3300021082|Ga0210380_10443844All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium594Open in IMG/M
3300021090|Ga0210377_10005837All Organisms → cellular organisms → Bacteria10057Open in IMG/M
3300021090|Ga0210377_10009388All Organisms → cellular organisms → Bacteria → Nitrospirae → Thermodesulfovibrionia → Thermodesulfovibrionales → Thermodesulfovibrionaceae → Thermodesulfovibrio7670Open in IMG/M
3300022208|Ga0224495_10007194All Organisms → cellular organisms → Bacteria6186Open in IMG/M
3300025326|Ga0209342_10490274All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum1024Open in IMG/M
3300025560|Ga0210108_1034205All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium952Open in IMG/M
3300025560|Ga0210108_1104652All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium567Open in IMG/M
3300025569|Ga0210073_1051341All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium860Open in IMG/M
3300025569|Ga0210073_1117704All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium576Open in IMG/M
3300025966|Ga0210105_1026613All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium853Open in IMG/M
3300026090|Ga0208912_1044600All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium655Open in IMG/M
3300027818|Ga0209706_10010148All Organisms → cellular organisms → Bacteria → Nitrospirae → Thermodesulfovibrionia → Thermodesulfovibrionales → Thermodesulfovibrionaceae → Thermodesulfovibrio4839Open in IMG/M
3300027871|Ga0209397_10321413All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium744Open in IMG/M
3300027877|Ga0209293_10576945All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium593Open in IMG/M
3300027877|Ga0209293_10711240All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium532Open in IMG/M
3300027887|Ga0208980_10464330All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034727Open in IMG/M
3300027890|Ga0209496_10606654All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium592Open in IMG/M
3300027979|Ga0209705_10582158All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium537Open in IMG/M
3300030613|Ga0299915_10931798All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium532Open in IMG/M
3300033406|Ga0316604_10149144All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1250Open in IMG/M
3300033408|Ga0316605_10486858All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1133Open in IMG/M
3300033408|Ga0316605_10953537All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium822Open in IMG/M
3300033413|Ga0316603_10049179All Organisms → cellular organisms → Bacteria3062Open in IMG/M
3300033413|Ga0316603_11183879All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium724Open in IMG/M
3300033414|Ga0316619_10302731All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1220Open in IMG/M
3300033414|Ga0316619_10312029All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1205Open in IMG/M
3300033419|Ga0316601_100490454All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1176Open in IMG/M
3300033419|Ga0316601_101889681All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium602Open in IMG/M
3300033480|Ga0316620_10479352All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1145Open in IMG/M
3300033481|Ga0316600_10307736All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1068Open in IMG/M
3300033482|Ga0316627_100031255All Organisms → cellular organisms → Bacteria2979Open in IMG/M
3300033482|Ga0316627_100639154All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium977Open in IMG/M
3300033482|Ga0316627_101450193All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium692Open in IMG/M
3300033485|Ga0316626_10077805All Organisms → cellular organisms → Bacteria → Nitrospirae2360Open in IMG/M
3300033485|Ga0316626_11072139All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum717Open in IMG/M
3300033486|Ga0316624_10345282All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1225Open in IMG/M
3300033486|Ga0316624_11166686All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium700Open in IMG/M
3300033486|Ga0316624_11533101All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium613Open in IMG/M
3300033486|Ga0316624_12080670All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium527Open in IMG/M
3300033487|Ga0316630_11636183All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium584Open in IMG/M
3300033493|Ga0316631_10054941All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1301Open in IMG/M
3300033513|Ga0316628_100227105All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae2266Open in IMG/M
3300033513|Ga0316628_101400627All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034931Open in IMG/M
3300033513|Ga0316628_101704288All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034839Open in IMG/M
3300033513|Ga0316628_101941221All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum782Open in IMG/M
3300033513|Ga0316628_102653631All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum660Open in IMG/M
3300033513|Ga0316628_103540430All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium563Open in IMG/M
3300033513|Ga0316628_103609342All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium557Open in IMG/M
3300033521|Ga0316616_101500148All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Sulfobium → Candidatus Sulfobium mesophilum874Open in IMG/M
3300033521|Ga0316616_103161581All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium620Open in IMG/M
3300033557|Ga0316617_101283102All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium730Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil31.68%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland12.87%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands12.87%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment8.91%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands8.91%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands3.96%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.97%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland2.97%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.97%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.97%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.97%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.99%
GroundwaterEnvironmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater0.99%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.99%
Hydrocarbon Resource EnvironmentsEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300002220Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011EngineeredOpen in IMG/M
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300004009Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004024Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004057Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2EnvironmentalOpen in IMG/M
3300004070Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004266Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009153Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009296Microbial communities from groundwater in Rifle, Colorado, USA-3A_0.2umEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014270Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1EnvironmentalOpen in IMG/M
3300014271Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2EnvironmentalOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300015256Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10DEnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018070Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1EnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300022208Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300025326Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025560Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025569Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025966Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026090Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027877Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027887Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300027890Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027979Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300030613Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227EnvironmentalOpen in IMG/M
3300033406Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CTEnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033419Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCTEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033481Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CTEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M
3300033493Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_AEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ13530_10196281733300001213WetlandMYKKEVLDITAGLMKKMVSFEAVDAVTQRSVLRGMEEGTTLIMEEKERVNKLIRDILAAPDYREILSSVTENTYDAFVFRYFTNVQYLSSLESDRINLPDMVPENEFSVWASVMLIDVDCL*
JGIcombinedJ13530_10617946223300001213WetlandMNKREVLDMTAGIMKKMVSYDKVDAVTQRSVMRGKENGIKLMIEEKERVNKLIRDILASLDHREVLAHVTEDTFDAFVFRYFQNVKYLSDLEVDDVELPDMVPENSFSVWAAVMLID
MLSBCLC_1048502013300002220Hydrocarbon Resource EnvironmentsMKKRAVLDTTADMMKKMVSFDKVEAVTGRSVMRGKEEGARLIMEQKERVNALVNNILASPDYRDILANVTEETYDAFVFRYFQNVKYLLDAGAEDIELPGMVPENSFSVWASVMLLDVDCL*
Ga0055438_1026473913300003995Natural And Restored WetlandsMKKMVSYEEVETVTQRSAMRGMENGTKLMIEEKGRVNKLIRDILSSLDYRDVLDKVTEDTFDAFVFRYFQNVKYLADLEVDDIELPDMVPENSFSVWAAVMLIDIDCL*
Ga0055437_1010314523300004009Natural And Restored WetlandsMNKKEVLDITAGMMRKMVSFEAVDAVTQRSVLRGLEEGTKLIIEEKEKVNKLIRDILAAPDYREILAGVSEDTFDAFVFRYFTNVQYLSSLESDSINLPDMVPENSFSVWAAVMLIDVDCF*
Ga0055436_1003174923300004024Natural And Restored WetlandsSFEEVDAVTQRSVMRGMEDGAKLMLAEKERVNKLIKEILASPDYRDILAHVPEHTFDAFVFRYFQNAKYLSCLEADDIELPDMVPENSFSVWAAVMLIDLDCL*
Ga0055436_1024815213300004024Natural And Restored WetlandsGMMRKMVSFEAVDAVTQRSVLRGLEEGTKLIIEEKEKVNKLIRDILAAPDYREILAGVSEDTFDAFVFRYFTNVQYLSSLESDSINLPDMVPENSFSVWAAVMLIDVDCF*
Ga0055496_1007569713300004057Natural And Restored WetlandsMKKGEVLDITAAMMKKMVSYDEVDAVTQRSAMRGMEEGTKLMLEEKERVNKLIKDILASLDYRKILDKVTEDTYDAFVFRYFSNVKYLSDLEADDIELPDMVPENSFSVWAAVMLIDVDCL*
Ga0055496_1008514813300004057Natural And Restored WetlandsMNKKEVLDITADMMKKMVSFEEVDAVTQRSVLRGREEGVKLMLEEKERVNKLIRDILASPDHREVLSHVAEATYDAFVFRYFQNVKYLSGLEADDIELPDMVPENSFSVWASVMLIDVDCL*
Ga0055488_1008602313300004070Natural And Restored WetlandsMNKREVLDTTAEMMKKMVSYEEVETVTQRSVLRGMENGTKLMIEEKERVNKLIIDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPEN
Ga0055457_1018388423300004266Natural And Restored WetlandsCMNKREVLDTTAGMMKKMVSDDEVEAVTQRSVMRGRLKGAELIIEEKARVNQLINDVLSELDFRSVLNKVTENTFDAFVFRYFQNVKYLADLEADDIELPDMVPENSFSVWAAVMLLDIDCL*
Ga0079037_10003303323300006224Freshwater WetlandsMKKREVLDITAAMMKKMVSYDEVDTVTQRSAMRGMEDGTKLMLEEKERVNKLITDIVASLDYRKILDQVTEDTFDAFVFRYFSNVKYLSDLEADDIELPDMVPENSFSVWAAVMLIDVDCL*
Ga0079037_10054865213300006224Freshwater WetlandsMNKKEVLDTTAEMMKKMVSYEEVESVTQRSVLRGMENGTKLMIEEKERVNKLIRDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVWAAVMLIDIDCL*
Ga0079037_10106386413300006224Freshwater WetlandsMNKKDALDITAEMMKKMVSFDEVETVTQRSAMRGMENGMKLMVEEKERVNRLIKEILASLDYRTILEKVTEDTFDAFVFRYFKNVKYLADLETSEIELPDMVPE
Ga0105095_1018754123300009053Freshwater SedimentMNQKEVLDTTAEMMKKMVSYEEVETVTQRSVLRGMENGTKLMIGEKERVNKLINDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVWAAVMLIDIDCL*
Ga0105106_1014691223300009078Freshwater SedimentMKKREVLDITAAMMKKMVSYDEVDTVTQRSAMRGMEDGTKLMLEEKERVNKLITNIVASLDYRKILDQVTEDTFDAFVFRYFSNVKYLSDLEADDIELPDMVPENSFSVWAAVMLIDVDCL*
Ga0105106_1045076723300009078Freshwater SedimentMNKKEVLDTTAEMMKKMVSYEEVETVTQRSVLRGMENGTKLMIGEKERVNKLINDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVWAAVMLIDIDCL*
Ga0105107_1000457283300009087Freshwater SedimentMNKKEVLDITAEMMKKIVSYDEVDAVTQRSIMRGKEAGTKLMLEEKERVNKLIKDILSSLDYREVTDKITEDTYDAFVFRYFSNVKYLADLETDDIELPDMVPENAFSVWASVMLIDVDCL*
Ga0105107_1064864123300009087Freshwater SedimentMNQKEVLDTTAEMMKKMVSYEEVETVTQRSVLRGMENGTKLMIEEKERVNKLIKDILSSLDYRSVMDNVTEDTYDAFVFRYFQNVKYLAALEVNEIELPDMVPQNSFSVWAAVMLIDIDCL*
Ga0102851_1010059043300009091Freshwater WetlandsLDITAGMMKKMVSFEEVDAVTHRSVLRGKEEGIKLMLEEKERVNKLIRDILASLDHRDVLAHVTEDTYDAFVFRYFQNVKYLADLETDDIELPDMVPENSFSIWAAVMLIDIDCL*
Ga0102851_1015505323300009091Freshwater WetlandsMKKREVLDITAAMMKKMVSYDEVDTVTQRSAMRGMEDGTKLMLEEKERVNKLITDILASLDYRKILDQVTEDTFDAFVFRYFSNVKYLSDLEADDIELPDMVPENSFSVWAAVMLIDVDCL*
Ga0102851_1032592433300009091Freshwater WetlandsMNKKEVLDTTAEMMKKMVSYEEVETVTQRSVLRGMENGTKLMIEEKERVNKLIRDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVWAAVMLI
Ga0102851_1123564113300009091Freshwater WetlandsMNKKEALDITAGMMKKMVSLEKVDAVTQRSAMRGMENGTKLMLEEKERVNKLIKDILASLDYREVLDKVSEDTFDAFVFRYFQNVKYLSDLNAEDIELPDMVPENSYSVWAAVMLIDIDC
Ga0102851_1336456213300009091Freshwater WetlandsAEMMKKIVSYDDVDAVTQRSIMRGKEAGEKMMLEEKGRVNKLIKDVLSSLDYREVLDKITEDTYDAFVFRYFSNVKYLAGLETDDIELPDMVPENAFSVWASVMLIDVDCL*
Ga0115026_1009033623300009111WetlandMNKKEVLDITAGMMKKMVSFEEVDAVTQRSVMRGKEEGTKLMLEEKARVNKLIRDILASPDHREVLAHVTENTYDAFVFRYFQNVKYLADLEADDIELPDMVPENSFSVWAAVMLIDIDCL*
Ga0115026_1016911123300009111WetlandMNKKEVLDTTAEMMKKMVSYEEVESVTQRSVLRGMENGTKLMIEEKERVNKLIRDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPQNSFSVWAAVMLIDIDCL*
Ga0115026_1113284513300009111WetlandMVSFEEVDAVTHRSVLRGKEEGIKLMLEEKERVNKLIRDILASLDHREVLAHVTEDTYDAFVFRYFQNVKYLADLETDDIELPDMVPENSFSIWAAVMLIDIDCL*
Ga0115026_1115329113300009111WetlandMMKKIVSYDEVDAVTQRSIMRGKEAGEKMMLEEKGRVNKLIKDILSSLDYREVLDKITEDTYDAFVFRYFSNVKFLAGLETDDIELPDMVPENAFSVWASVMLIDVDCL*
Ga0115026_1157468313300009111WetlandMNKREVLDITAGMMKKMVSYEEVETVTQRSVLRGMENGTKLMIEEKERVNKLIKDILSSLDYRNVLDKVTEDTYDAFVFRYFKNVKYLADLEVNDIELPDMVPENSFSVWAAVMLIDIDCL*
Ga0115027_1000049533300009131WetlandMKKREVLDITAAMMKKMVSYDEVDTVTQRSAMRGMEDGTKLMLEEKDRVNKLIKDILASLDYRKILDKVTEDTYDAFVFRYFSNVKYLSDLAADDIELPDMVPENSFSVWAAVMLIDVDCL*
Ga0115027_1015299223300009131WetlandMNKKEVLDTTAEMMKKMVSYEEVETVTQRSVLRGMENGTKLMIEEKERVNKLIRDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPEN*
Ga0115027_1054920023300009131WetlandMNKRDALDITAEMMKKMVSFDEVETVTQRSAMRGMENGMKLMVEEKERVNRLIKEILASLDYRTILEKVTEDTFDAFVFRYFKNVKYLADLETSEIELPDMVPENSFSVWAAVMLIDVDCL*
Ga0105094_1029486323300009153Freshwater SedimentMIKREVLDITAAMMKKMVSYDEVDAVTQRSAMRGMEDGTKLMLEEKERVNKLITDIVASLDYRKILDQVPEDTFDAFVFRYFSNVKYLSDLEADDIELPDMVPENSFSVWAAVMLIDVDCL*
Ga0105100_1015810223300009166Freshwater SedimentMNKKEVLDTTAEMMKKMVSYEEVETVTQRSVLRGMENGTRLMIEEKERVNKLINDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVWAAVMLIDIDCL*
Ga0113563_1088303723300009167Freshwater WetlandsKKMVSFEEVDAVTHRSVMRGKENGLKLMIEEKERVNKLINDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLATLEVNEIELPDMVPENSFSVWAAVMLIDIDCL*
Ga0115028_1048678613300009179WetlandMNKKEVLDTTAEMMKKMVSYEEVETVTQRSVLMGMENGTKLMIEEKERVNKLIRDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVWAAVMLIDIDCL*
Ga0103681_104753943300009296GroundwaterMNKREVLDITADMMKKMVSYDEVETVTQRSVMRGMENGTKLMLEEKERVNKLINDILSSLDYRNVLNKITEDTFDAFVFRYFKNVKYLADLEADDIELPDMVPENSFSVWAAVMLIDIDCL*
Ga0153915_1044440323300012931Freshwater WetlandsMKKKEVLDITAGMMKQIVSFEEVEAVTQRSIMRGKEAGTKLMLEEKERVNKLIKDILSSLDYREVLDKITEDTYDAFVFRYFTNVEYLARLETDDIELPGMVPENAFSVWASVMLIDVDCL*
Ga0153915_1096879523300012931Freshwater WetlandsMNKKEVLDTTAGMMKKMVSYDEVETVTQRSVMRGMENGTKLMIEEKERVNKLINDILSSLDYRDVLDKVTEDTFDAFVFRYFKNVKYLADLEADDIELPDMVPENSFSVWAAVMLIDIDCL*
Ga0153916_1027434613300012964Freshwater WetlandsMKKKEVLDITAGMMKKIVSFEEVEAVTQRSIMRGKEAGTKLMLEEKERVNKLIKDILSSLDYREVLDKITEDTYDAFVFRYFTNVEYLARLETDDIELPGMVPENAFSVWASVMLIDVDCL*
Ga0153916_1037248423300012964Freshwater WetlandsMKKKEVLDMTAEMMKKIVSYEQVEAVTQRSIMRGKEAGTKLMLEEKERVNKLINDILSSLDYRKVLDKITEDTYDAFVFRYFSNVEYLARLESDDLEFPGMVPENAFSVWSSVMLIDVDCL*
Ga0181523_1044075513300014165BogMKKREVLDITAEMMKKMVSYDEVDEVTQRSAMRGMENGTKLMIEEKERVNKLVRDVLVSLDYRKVLDKVAEDTFDAFVFRYFKNVRYLAELEADEIELPDMVPENSYSVWAAVMLTNIDCL*
Ga0075325_118370623300014270Natural And Restored WetlandsVNKKEVLDTTAEMMKKMVAYEEVETVTQRSVLRGMENGTKLMIEEKERVNKLINDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVWAAVMLIDVDCL*
Ga0075326_107715513300014271Natural And Restored WetlandsMNKKEVLDTTAEMMKKMVSYEEVETVTQRSVLRGMENGTKLMIGEKERVNKLIKDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVW
Ga0180063_121136523300014885SoilMNKKEVLDTTAGMMKKMVSYEEVETITQRSVMMGIENGTKLMMEEKERVNNLIKDILSSLDYRNILDKVTEDTLDAFVFRYFKNVKYLADLEVNEIELPDMVPE
Ga0180063_127990523300014885SoilMNKKEVLDITAGMMKKMVSYDEVETVTQRSVMRGMENGTKLMIEEKERVNKLIKDVLSSLDYRNVLDKVTEDTFDAFVFRYFTNVKYLADLEVCDIELPDMVPENSFSVWAAVMLIDIDCL*
Ga0180073_103663613300015256SoilMSQEGRMNKKEVLDITAGMMKKMVSFEEVDVVTQRSVMRGKEDGIRLMIEEKERVNNLIRDILASLDHREVLAQAAEDTYDAFVFRYFQNVKYLADLEAEDIELPDMVPEN
Ga0184615_1000540113300018059Groundwater SedimentMNKREVLDITAGMMKKMVSYDEVETVTQRSVMRGMENGTKLMIEEKERVNKLIKDVLSSLDYRNVLDKVTEDTFDAFVFRYFTNVKYLADLEVDDIELPDMVPENSFSVWAAVMLIDIDC
Ga0184615_1029446323300018059Groundwater SedimentVSYDEVETVTQRSVMRGMENGTKLMIEEKERVNKLIKDILSSLDYRNILDKVTEDTLDAFVFRYFKNVKYLADLEVNEIELPDMVPENSFSVWAAVMLIDIDCL
Ga0184631_1008970713300018070Groundwater SedimentMNKKEVLDMTAGMMKKMVSFDEVETVTQRSAMRGMENGTKLMTEEKERVNKLIKDILSSLDYRNVLDKVTEDTFDAFVFRYFKNVKYLSDLEVDDIELPDMVPENSFSVWAA
Ga0210380_1044384413300021082Groundwater SedimentMKKMVSFEEVDAVTQRSVLRGREEGTKLMIEEKERVNKLIREILASLDHREVLAHVTQDTYDAFVFRYFQNVKYLADLEADDIELPDMVPENSFSVWAAVMLMDVDCL
Ga0210377_1000583733300021090Groundwater SedimentMNKKEVLDITAGMMKKMVSYDEVETVTQRSVMRGMENGTKLMIEEKERVNKLIKDVLSSLDYRNVLDKVTEDTFDAFVFRYFTNVKYLADLEVDDIELPDMVPENSFSVWAAVMLIDIDC
Ga0210377_1000938883300021090Groundwater SedimentMKRKEVLDITAGMMKQMVSFEEVDAVTQRSVMRGMEDGAKLMLEEKERVNKLIKEILASPDYRDILAHVPEDTFDAFVFRYFQNAKYLSCLEADDIELPDMVPENSFSVWAAVMLIDPDC
Ga0224495_1000719423300022208SedimentMKKKEVLDITAGMMKKIVSYEKVEAVTQRSVMRGKEAGTRLMLEEKERVNKLIKDILSSLDYREVLDKVTEDTYDAFVFRYFHNVKYLADLKADDIELPGVVPENAFSVWAAVMLIDVDC
Ga0209342_1049027423300025326SoilMKKREVLDITAGMMKKMVSYDAVEAVTQRSAMRGMEDGTKLMLEEKERVNKLIKDVLVSLDYRKILDKVSENTFDAFVFRYFSNVKYLSDLDATDIELPDMVPENAFSVWSAVML
Ga0210108_103420523300025560Natural And Restored WetlandsSFEEVDAVTQRSVMRGMEDGAKLMLAEKERVNKLIKEILASPDYRDILAHVPEHTFDAFVFRYFQNAKYLSCLEADDIELPDMVPENSFSVWAAVMLIDLDCL
Ga0210108_110465213300025560Natural And Restored WetlandsGMMRKMVSFEAVDAVTQRSVLRGLEEGTKLIIEEKEKVNKLIRDILAAPDYREILAGVSEDTFDAFVFRYFTNVQYLSSLESDSINLPDMVPENSFSVWAAVMLIDVDCF
Ga0210073_105134123300025569Natural And Restored WetlandsVKKKEVLDMAAEMMKKMVSYDDVEAVTQRSVMRGKQDGTRLMIDEKERVNNLIREILASLDYRNVLGKVTEDTFDAFVFRYFQNVKYLADLEIYDIELPDMVPENSFSVWAAVMLIDVDC
Ga0210073_111770423300025569Natural And Restored WetlandsMNKREVLDITAGMMKKMVSYEEVETVTQRSVMRGMENGTKLMIEEKESVNKLIKNILSSLDYRNVLDKVTEDTFDAFVFRYFQNVKYLADLEVDDIELPDMVPENSFSVWAAVMLIDIDC
Ga0210105_102661323300025966Natural And Restored WetlandsMNKKEVLDITADMMKKMVSFEEVDAVTQRSVLRGREEGVKLMLEEKERVNKLIRDILASPDHREVLSHVAEATYDAFVFRYFQNVKYLSGLEADDIELPDMVPENSFSVWASVMLIDVDC
Ga0208912_104460013300026090Natural And Restored WetlandsMNKKEVLDTTAEMMKKMVSYEEVETVTQRSVLRGMENGTKLMIGEKERVNKLIKDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVWAAVMLIDIDC
Ga0209706_1001014843300027818Freshwater SedimentMNKKEVLDITAEMMKKIVSYDEVDAVTQRSIMRGKEAGTKLMLEEKERVNKLIKDILSSLDYREVTDKITEDTYDAFVFRYFSNVKYLADLETDDIELPDMVPENAFSVWASVMLIDVDC
Ga0209397_1032141313300027871WetlandEVLDITAGMMKKMVSFEEVDAVTQRSVMRGKEEGTKLMLEEKARVNKLIRDILASPDHREVLAHVTENTYDAFVFRYFQNVKYLADLEADDIELPDMVPENSFSVWAAVMLIDIDCL
Ga0209293_1057694513300027877WetlandMNKKEVLDITAGMMKKMVSFEEVDAVTQRSVMRGKEEGTKLMLEEKARVNKLIRDILASPDHREVLAHAAEDTFDAFVFRYFQNVKYLADLEADDIELPDMVPENSFSVWAAVMLIDIDC
Ga0209293_1071124013300027877WetlandMNKKEVLDTTAEMMKKMVSYEEVESVTQRSVLRGMENGTKLMIEEKERVNKLIRDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVWAAVMLIDIDC
Ga0208980_1046433013300027887WetlandMRQKMKKKEVLDLTAGMMKKMVSFEEVDAVTQRSVMRGKEDGIKLILEEKQRVNDLIREILASLDHREVLAHVAEDTYDAFVFRYFQNVKYLSDLETDDIELPDMVPENSFSVWAAVM
Ga0209496_1060665413300027890WetlandGHMKKREVLDITAAMMKKMVSYDEVDTVTQRSAMRGMEDGTKLMLEEKERVNKLITDIVASLDYRKILDQVTEDTFDAFVFRYFSNVKYLSDLEADDIELPDMVPENSFSVWAAVMLIDVDCL
Ga0209705_1058215813300027979Freshwater SedimentMKKREVLDITAAMMKKMVSYDEVDAVTQRSAMRGMEDGTKLMLEEKERVNKLITNIVASLDYRKILDQVTEDTFDAFVFRYFSNVKYLSDLEADDIELPDMVPENSFSVWAAVMLIDVDC
Ga0299915_1093179813300030613SoilMKKKEVLDITAEMMKKIVSYDEVEAVTQRSIMRGKEAGTKLMLEEKERVNKLIKDILSSLDYREVLDKITEDTYDAFVFRYFSNVKYLAGLETDDIELPGMVPENAFSVWSSVMLIDADC
Ga0316604_1014914423300033406SoilMKKREVLDITAAMMKKMVSYDEVDTVTQRSAMRGMEDGTKLMLEEKERVNKLITDIVASLDYRKILDQVTEDTFDAFVFRYFSNVKYLSDLEADDIELPDMVPENSFSVWAAVMLIDVDC
Ga0316605_1048685813300033408SoilEVETVTQRSVLRGMENGTKLMIEEKERVNKLIRDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVWAAVMLIDIDCL
Ga0316605_1095353713300033408SoilMNKKEVLDITAGMMKKMVSFEEVDAVTQRSVMRGKEEGTKLMLEEKARVNKLIRDILASPDHREVLAHVTENTYDAFVFRYFQNVKYLADLEADDIELPDMVPENSFSVWAAVMLIDIDC
Ga0316603_1004917913300033413SoilMNKKEVLDTTAEMMKKMVSYEEVETVTQRSVLRGMENGTKLMIEEKERVNKLIRDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVWAAVMLIDIDC
Ga0316603_1118387923300033413SoilMNKKVVLDTTAEMMKKMVSIEEVETVTQRSVMRGMEIGTKLMIEEKERVNKLIKDILSSLDYRTVLDKITEDTFDAFVFRYFQNVKYLADLEADDIELPDMVPENTFSVWAAVMLIDMDC
Ga0316619_1030273113300033414SoilMNKKEVLDITAEMMKKIVSYDEVEAVTQRSIMRGKEAGTKLMLEEKERVNKLIKDILSSLDYREVLANIAEDTYDAFVFRYFSNVKYLAGLETDDIELPDMVPENAFSVWASVMLIDVDC
Ga0316619_1031202913300033414SoilYDEVDAVTQRSAMRGMEDGTKLMLEEKDRVNKLIKDILASLDYRKILDKVTEDTYDAFVFRYFSNVKYLSDLEADDIELPDMVPENSFSVWAAVMLIDVDCL
Ga0316601_10049045423300033419SoilMNKKEVLDITAGMMKKMVSFEEVDAVTHRSVMRGKENGLKLMIEEKERVNKLIRDILASLDHRDVLAHVTEDTYDAFVFRYFQNVKYLADLETDDIELPDMVPENSFSIWAAVMLIDIDC
Ga0316601_10188968123300033419SoilMNKKVVLDTTAEMMKKMVSIEEVETVTQRSVMRGMENGTKLMIEEKERVNKLIKDILSSLDYRTVFDKITEDTFDAFVFRYFQNVKYLADLEADDIELPDMVPENTFSVWAAVMLIDMDC
Ga0316620_1047935223300033480SoilMNKKEVLDTTAGMMKKMVSYEELENVTQRSAMMGMESGIKLMIEEKERVNKLINDILSSLDYRNVLDKVKEDTFDAFVFRYFQNVKYLADLEVDDIELPDMVPENTFSVWASVMLIDVDC
Ga0316600_1030773623300033481SoilMKKREVLDITAAMMKKMVSYDEVDTVTQRSAMRGMEDGTKLMLEEKERVNKLITDIVASLDYRKILDQVTEDTFDAFVFRYFSNVKYLSDLEAEDIELPDMVPENSFSVWAAVMLIDVDC
Ga0316627_10003125533300033482SoilMKKREVLDITAAMMKKMVSYDEVETVTQRSAMRGMEDGTKLMLEEKERVNKLITDIVASLDYRKILDQVTEDTFDAFVFRYFSNVKYLSDLEADDIELPDMVPENSFSVWAAVMLIDVDC
Ga0316627_10063915423300033482SoilMNKKEVLDTTAEMMKKMVSYEEVETVTQRSVLMGMENGTRLMIEEKERVNKLINDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVWAAVMLIDIDC
Ga0316627_10145019313300033482SoilMEKKEVLDTTAGMMKKMVSFEEVDAVTQRSVMRGKEEGIKLMLEEKERVNKLIRDILASLDHREVLAHVTEDTYDAFVFRYFQNVKYLSELETDDIELPDMVPENSFSVWASVMLIDVDC
Ga0316626_1007780523300033485SoilMNKKEVLDITAGMMKKMVSFEEVDAVTQRSVMRGKEEGTKLMLEEKARVNKLIRDILASPDHREVFAHAAEDTFDAFVFRYFQNVKYLADLEADDIELPDMVPENSFSVWAAVMLIDIDC
Ga0316626_1107213913300033485SoilMNKRDALDITAEMMKKMVSFDEVETVTQRSAMRGMENGMKLMVEEKERVNRLIKEILASLDYRTILEKVTEDTFDAFVFRYFKNVKYLADLETSEIELPD
Ga0316624_1034528223300033486SoilMNKKEVLDTTAGMMKKMVSYEELENVTQRSAMMGMESGIKLMIEEKERVNKLINDILSSLDYRNVLDKVKEDTFDAFVFRYFQNVKYLADLEVDDIELPDMVPENTFSVWAAVMLIDVDC
Ga0316624_1116668623300033486SoilMNKREVLNITADMMKKMVSYDEVDTVTQRSAMRGMENGTRLMIEEKERVNKLINDILSELDFRKVLDEVTEDTFDAFVFRYFQNVKYLADLEADDIELPNMVPENSFSVWAAVMLIDIDC
Ga0316624_1153310113300033486SoilAAMMKKMVSYDEVDTVTQRSAMRGMEDGTKLMLEEKERVNKLITDILASLDYRKILDQVTEDTFDAFVFRYFSNVKYLSDLEADDIELPDMVPENSFSVWAAVMLIDVDCL
Ga0316624_1208067023300033486SoilMNKREVLDTTAGMMKKMVSYEEVETITQRSAMRGMENGTKLMLEEKERVNKLIKDILASLDYRDVLDKVTEDTFDAFVFRYFQNVKYLADLEVDDIELPDMVPENSFSVWAAVMLIDIDC
Ga0316630_1163618323300033487SoilMNKKEVLDITAGMMKKMVSFEEVDAVTHRSVMRGKENGLKLMIEEKERVNKLIRDILASLDHREVLAHVTEDTYDAFVFRYFQNVKYLADLETDDIELPDMVPENSFSIWAAVMLIDIDC
Ga0316631_1005494113300033493SoilTAGMMKKMVSYDEVETVTQRSAMRGMEEGTKLMIEEKERVNKLIKDILASLDYRIVLDKITEDTFDAFVFRYFQNVKYLADLEVDDIELPDMVPENSFSVWAAVMLIDIDCL
Ga0316628_10022710523300033513SoilMNKREVLDITAGMMKKMVSYEELENVTQRSAMMGMESGIKLMIEEKERVNKLINDILSSLDYRNVLDKVKEDTFDAFVFRYFQNVKYLADLEVDDIELPDMVPENTFSVWAAVMLIDVDC
Ga0316628_10140062723300033513SoilMDKREVLDKTADMMKKMVTFEEVDAVTHRSVLRGKEEGIKLVQEEKDRVNSLIREILASLDHREVLSHVSEDTYDAFVFRYFQNVKYLADLEADDIELPDMVPENSFSVWAAVMLIDVDC
Ga0316628_10170428823300033513SoilMNKKEVLDITAGMMKKMVSFEEVDAVTQRSVLRGKEEGIKLMLEEKERVNDLIREILASVDHREVLAHAAEDTYDAFVYRYFQNVKYLSDLEADDIELPDMVPENSFSVWAAVMLIDVDC
Ga0316628_10194122113300033513SoilMNKREVLDITAGMMKKMVSYDEVETITQRSVMRGMENGTKLMIEEKERVNKLINDILSSLDYRNVLDKVTEDTYDAFVFRYFQNVKYLADLEADDIELPDMVPENSFSVWAAVMLIDIDC
Ga0316628_10265363123300033513SoilMNKREVLDTTAGMMKKMVSYEEVETVTQRSAMRGLENGTMLMIEEKERVNKLIKDILSSLDYRDVLDKVTEDTFDAFVFRYFQNVKYLADLEVDDIELPEL
Ga0316628_10354043023300033513SoilMNKKEVLDTTAGMMKKMVSYEEVDTVTQRSAMRGMENGAKLMIEEKERVNKLINDILSSLDFRKILDKVTEDTFDAFVFRYFQNVKYLADLEAEDIELPDMVPENSFSVWAAVMLIDIDC
Ga0316628_10360934223300033513SoilMNKIEVLDTTAGMMKKMVSYDEVETVTQRSAMRGMEEGTKLMIEEKERVNKLIKDILASLDYRIVLDKITEDTFDAFVFRYFQNVKYLADLEVDDIELPDMVPENSFSVWAAVMLIDIDC
Ga0316616_10150014813300033521SoilMNKKEVLDTTAEMMKKMVSYEEVETVTQRSVLRGMENGTKLMIEEKERVNKLINDILSSLDYRSVLDKVTEDTYDAFVFRYFQNMKYLAALEVNEIELPDMVPENSFSVWAAVMLIDIDC
Ga0316616_10316158113300033521SoilMNKKDALDITAEMMKKMVSFDEVETVTQRSAMRGMENGMKLMVEEKERVNRLIKEILASLDYRTILEKVTEDTFDAFVFRYFKNVKYLADLETSEIELPDMVPENSFSVWAAVMLIDVDC
Ga0316617_10128310213300033557SoilMNKKEVLDITAGMMKKMVSFEEVDAVTQRSVMRGKEEGTKLMLEEKARVNKLIRDILASPDHREVLAHVTENTYDAFVFRYFQNVKYLADLEADVIELPDMVPENSFSVWAAVMLIDIDC


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.