Metagenome Family F103442

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F103442
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	95 residues
Representative Sequence	RVGAVRDGLADFYVSAGRLDEAEALFERRHDEDRGDVAVALSASRAFLAAGSISHAVRWLGVGAVRAATLGRDELANRLRSKQERVRERLS
Number of Associated Samples	87
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.99 %
% of genes near scaffold ends (potentially truncated)	99.01 %
% of genes from short scaffolds (< 2000 bps)	96.04 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.85

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (17.822 % of family members)
Environment Ontology (ENVO)	Unclassified (34.653 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.614 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.50% β-sheet: 0.00% Coil/Unstructured: 39.50%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.85
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.85
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
a.118.8.1: Tetratricopeptide repeat (TPR)	d1qqea_	1qqe	0.71231
a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains	d3txna1	3txn	0.70462
a.118.8.2: Transcription factor MalT domain III	d1hz4a_	1hz4	0.70174
a.118.1.14: MIF4G domain-like	d1uw4b_	1uw4	0.68965
a.118.8.10: Pentatricopeptide repeat (PPR)	d4g26a1	4g26	0.67239

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13481	AAA_25	24.75
PF13541	ChlI	5.94
PF00254	FKBP_C	0.99
PF00557	Peptidase_M24	0.99
PF13428	TPR_14	0.99
PF00126	HTH_1	0.99
PF14681	UPRTase	0.99
PF01845	CcdB	0.99
PF07362	CcdA	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG5302	Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	73.27 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	63.37 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	63.37 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	38.61 %
Unclassified	root	N/A	1.98 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	36.63 %
Unclassified	root	N/A	1.98 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	36.63 %
Unclassified	root	N/A	1.98 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	36.63 %
Unclassified	root	N/A	1.98 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	36.63 %
Unclassified	root	N/A	1.98 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003987\|Ga0055471_10167942	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300004157\|Ga0062590_103016367	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005327\|Ga0070658_10600187	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	954	Open in IMG/M
3300005340\|Ga0070689_100608779	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	947	Open in IMG/M
3300005343\|Ga0070687_100999088	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300005347\|Ga0070668_100347226	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1255	Open in IMG/M
3300005434\|Ga0070709_11074324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	643	Open in IMG/M
3300005435\|Ga0070714_101279273	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005440\|Ga0070705_101802819	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005444\|Ga0070694_100267314	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1299	Open in IMG/M
3300005444\|Ga0070694_100719222	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	813	Open in IMG/M
3300005467\|Ga0070706_100475749	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1162	Open in IMG/M
3300005563\|Ga0068855_101185019	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300005577\|Ga0068857_100806167	All Organisms → cellular organisms → Bacteria → Proteobacteria	897	Open in IMG/M
3300005617\|Ga0068859_102123295	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005617\|Ga0068859_102744266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	541	Open in IMG/M
3300005618\|Ga0068864_102634550	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005986\|Ga0075152_10687567	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300006028\|Ga0070717_10732792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	898	Open in IMG/M
3300006046\|Ga0066652_100780682	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	913	Open in IMG/M
3300006056\|Ga0075163_12123034	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300006237\|Ga0097621_101982403	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300006844\|Ga0075428_101889671	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300006950\|Ga0075524_10101034	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1232	Open in IMG/M
3300006954\|Ga0079219_11294667	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300006954\|Ga0079219_11899109	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300006969\|Ga0075419_10172150	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1424	Open in IMG/M
3300007004\|Ga0079218_13321283	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300009098\|Ga0105245_12618412	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300009147\|Ga0114129_11933173	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300010320\|Ga0134109_10423483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	536	Open in IMG/M
3300010360\|Ga0126372_10894182	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	890	Open in IMG/M
3300010399\|Ga0134127_12585271	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300010400\|Ga0134122_11356291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	722	Open in IMG/M
3300010403\|Ga0134123_10875586	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	901	Open in IMG/M
3300010403\|Ga0134123_11778069	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	669	Open in IMG/M
3300012909\|Ga0157290_10329402	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	573	Open in IMG/M
3300012964\|Ga0153916_12615440	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300013297\|Ga0157378_12692296	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	550	Open in IMG/M
3300014168\|Ga0181534_10538287	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	665	Open in IMG/M
3300014168\|Ga0181534_10710219	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	588	Open in IMG/M
3300014745\|Ga0157377_11514027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	534	Open in IMG/M
3300015024\|Ga0167669_1149355	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	614	Open in IMG/M
3300015264\|Ga0137403_10891083	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	740	Open in IMG/M
3300015264\|Ga0137403_11139229	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	626	Open in IMG/M
3300015373\|Ga0132257_102193672	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	715	Open in IMG/M
3300018931\|Ga0193601_1146484	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300020021\|Ga0193726_1222111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	782	Open in IMG/M
3300020027\|Ga0193752_1059847	All Organisms → cellular organisms → Bacteria → Proteobacteria	1634	Open in IMG/M
3300021433\|Ga0210391_11109255	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300024288\|Ga0179589_10604537	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300025153\|Ga0209512_1210828	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	735	Open in IMG/M
3300025910\|Ga0207684_10208073	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1688	Open in IMG/M
3300025935\|Ga0207709_11449937	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	569	Open in IMG/M
3300025936\|Ga0207670_10023033	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	3870	Open in IMG/M
3300025936\|Ga0207670_11348762	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	605	Open in IMG/M
3300025940\|Ga0207691_11736263	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	504	Open in IMG/M
3300025942\|Ga0207689_10145642	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1951	Open in IMG/M
3300025949\|Ga0207667_10620045	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1089	Open in IMG/M
3300026023\|Ga0207677_10597879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	968	Open in IMG/M
3300026035\|Ga0207703_11512609	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300026095\|Ga0207676_11817413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	608	Open in IMG/M
3300026116\|Ga0207674_10567017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1097	Open in IMG/M
3300028381\|Ga0268264_12633981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	507	Open in IMG/M
3300028770\|Ga0302258_1166171	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	545	Open in IMG/M
3300028802\|Ga0307503_10466672	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	673	Open in IMG/M
3300029989\|Ga0311365_10859477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	784	Open in IMG/M
3300029989\|Ga0311365_11292537	Not Available	628	Open in IMG/M
3300030000\|Ga0311337_11961294	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	514	Open in IMG/M
3300030047\|Ga0302286_10281045	All Organisms → cellular organisms → Bacteria → Proteobacteria	837	Open in IMG/M
3300030050\|Ga0302255_1053002	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300030294\|Ga0311349_10847886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	860	Open in IMG/M
3300030294\|Ga0311349_12036348	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	528	Open in IMG/M
3300030613\|Ga0299915_10879837	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300030838\|Ga0311335_11061184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	579	Open in IMG/M
3300031232\|Ga0302323_101250726	Not Available	831	Open in IMG/M
3300031232\|Ga0302323_102348376	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300031238\|Ga0265332_10048746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1821	Open in IMG/M
3300031239\|Ga0265328_10262278	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	663	Open in IMG/M
3300031521\|Ga0311364_11550868	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	654	Open in IMG/M
3300031521\|Ga0311364_11554998	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	653	Open in IMG/M
3300031538\|Ga0310888_11109371	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	500	Open in IMG/M
3300031726\|Ga0302321_100518950	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1317	Open in IMG/M
3300031726\|Ga0302321_102914444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	559	Open in IMG/M
3300031740\|Ga0307468_100312758	All Organisms → cellular organisms → Bacteria → Proteobacteria	1148	Open in IMG/M
3300031902\|Ga0302322_100065564	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	3668	Open in IMG/M
3300031902\|Ga0302322_101347040	All Organisms → cellular organisms → Bacteria → Proteobacteria	868	Open in IMG/M
3300031912\|Ga0306921_12449279	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	543	Open in IMG/M
3300031918\|Ga0311367_10699371	All Organisms → cellular organisms → Bacteria → Proteobacteria	1030	Open in IMG/M
3300031944\|Ga0310884_10997753	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300032892\|Ga0335081_11910421	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	637	Open in IMG/M
3300033408\|Ga0316605_10042221	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3158	Open in IMG/M
3300033412\|Ga0310810_10768958	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	878	Open in IMG/M
3300033413\|Ga0316603_10027453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	3869	Open in IMG/M
3300033486\|Ga0316624_10386228	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1166	Open in IMG/M
3300033486\|Ga0316624_10569574	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	980	Open in IMG/M
3300033487\|Ga0316630_12206706	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	509	Open in IMG/M
3300033513\|Ga0316628_100429744	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300033550\|Ga0247829_10269479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1374	Open in IMG/M
3300033551\|Ga0247830_11247639	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300034170\|Ga0370487_0088325	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	985	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.28%
Host-Associated	Host-Associated	25.74%
Engineered	Engineered	1.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.33%
Plants	Host-Associated → Plants	25.74%
Aquatic	Environmental → Aquatic	4.95%
Wastewater	Engineered → Wastewater	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.50%
Peat	Environmental → Terrestrial → Peat	17.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.88%
Freshwater	Environmental → Aquatic → Freshwater	3.96%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	1.98%
Marine	Environmental → Aquatic → Marine	0.99%
Roots	Host-Associated → Plants → Roots	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	17.82%
Loam	Environmental → Terrestrial → Soil → Loam	11.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.97%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	1.98%
Ice	Environmental → Aquatic → Freshwater → Ice	0.99%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.99%
Sand	Environmental → Terrestrial → Soil → Sand	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	17.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.98%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.99%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	0.99%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.99%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	17.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.98%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	1.98%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.99%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	0.99%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005986	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 C2 DNA	Engineered	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006056	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNA	Engineered	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015024	Arctic sediment microbial communities from supraglacial cryoconite, Rabots glacier, Tarfala, Sweden (Sample Rb cryoconite)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018931	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025153	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - frozenSSSS metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030050	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_4	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034170	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055471_101679421	3300003987	Natural And Restored Wetlands	RDVAVALSASRAFLAAGATSHAVHWLGLAARRAEDLGRTDFAKILQDKQATIRKRLS*
Ga0062590_1030163672	3300004157	Soil	FETRHEEDRADVAVALSASRAFLAAGSISHAVRWLGVAAGRAQSLGRDELAARLRQKQEAVRKRLS*
Ga0070658_106001871	3300005327	Corn Rhizosphere	SFVDAYAAALSQIPHGSARIGAVRDGLADFYVSVHQIDKAEALFERRHEEDRADVAVSLTASRAFLAAGSISHAVRWLGIAAVRAQTLGRDELATRLRQKQESVRKRLS*
Ga0070689_1006087793	3300005340	Switchgrass Rhizosphere	GLERIGAVRDGLADYYVSVGRIDDAQALFERRHDEDQGDVAVALSASRAFLAAGSVSHAVRWLGVGAARAAALGREELAERLRQKQERVRERLS*
Ga0070687_1009990882	3300005343	Switchgrass Rhizosphere	DNYRELIPTVTDWTERVAAVRDGLADAYVTAGRLDQAERLFKERHSEDTNDVAVALSASRAFLAAGAISHAVHWLGLGAARAQDLGRSEFANTLRAKQAIIRKRLS*
Ga0070668_1003472261	3300005347	Switchgrass Rhizosphere	RALGEVPHGAERVGAVRDGLADFYVSAGRLDEAEALFERRHEEDQGDVAVALSASRAFLAAGSISHAVRWLGVGAVRAATLGRDELANRLRTKQARVRARLS*
Ga0070709_110743242	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LVVVPHGATRVAAMRDGLADVYVTAGKLDLAEALFEKRHDEDPNDVAVALSASRAFLAAGSVSHAVRWLGVGAVRAETLGRHDLAVRLRQKQDSVRKRLS*
Ga0070714_1012792731	3300005435	Agricultural Soil	PHGSAKIGAVRDGLADFYVSAGLIDKAETLFETRHEEDSRDVAVALTASRAFLAAGSVSHAVRWLGIAAGRAQSLGRDELADRLRKKQEAVRKRMS*
Ga0070705_1018028192	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	FERRHDEDRGDVAVALSASRAFLAAGSISHAVRWLGVGAVRAATLGRDDLANRLRIKQERVRERLS*
Ga0070694_1002673141	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	EDFVAAYAGALGHVPGGPERVGAVRDGLADFYVSAGRLDEAEALFERRHDEDRGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAKTLGRDEMASRLRTKQERVRERLS*
Ga0070694_1007192222	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	DGLADYYVSAGRIDAAEALFERRHDEDRHDVAVALSASRAFLAAGSVSHAVRWLGVGAERAEKLGRGELATRLRQKQERVRERLS*
Ga0070706_1004757491	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SALSRIPHGGTRVGAVRDGLADVYVSAGMIDEANALFERRHEEDRDDVAVALSASRAFLAAGSIIHAVRWLGVGAGRAQSLGRDELATRLRQKQEAVRKRLS*
Ga0068855_1011850191	3300005563	Corn Rhizosphere	VRDGLADAYVTAGRLDQAERLFKERHSEDTNDVAVALSASRAFLAAGNVSHAVRWLGIGAGRAQALGRTELAQKLRDKQASVRKRLS*
Ga0068857_1008061671	3300005577	Corn Rhizosphere	VRAYEDFVAAYASALGQIPHSAARVGAVRDGLADFYVSAGRLDEAEALFERRHDEDRGDVAVALSASRAFLAAGSISHAVRWLGVGAVRAQVLGRDDLATRLRAKQERVRERLS*
Ga0068859_1021232951	3300005617	Switchgrass Rhizosphere	YERFADAYAKALTDVPHGAARIGAVRDGLADVYVTAGMIDEAEALFEIRHEEDNNDVAVALSASRAFLAAGSISHAVRWLGVGAGRAQALGRTDLADRLRQKQEAVRKRLS*
Ga0068859_1027442662	3300005617	Switchgrass Rhizosphere	ARVGAVRDGLADVYVSAGMIDQAEALFETRHEEDRGDVAVALSASRAFLAAGSISHAVRWLGVGAGRAQALGRTELAERLRQKQASVRKRLS*
Ga0068864_1026345502	3300005618	Switchgrass Rhizosphere	LADFYVSAGRLDEAEALFERRHEEDQGDVAVALSASRAFLAAGSISHAVRWLGVGAVRAATLGRDELANRLRTKQARVRARLS*
Ga0075152_106875671	3300005986	Wastewater Effluent	KGDIEMTVRAYEDFVAAYSRALVDLPRGHERIGASRDGLADYYVSVGKLDEAEALFQKRHEEDRGDVAVALSASRAFLAAGSVSHAVRWLGVGADRATELGRADLANRLREKLGRVRERLS*
Ga0070717_107327921	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LADFYVSAGRLDEAEELFERRHEEDRGDVAVALTASRAFLAAGSISHAVRWLGIAATRATTLGRDDLAKRLRGKQERVRARLS*
Ga0066652_1007806822	3300006046	Soil	GRDQVDLTVRTYEEFVGAYTRALAAVPHGTKRIGAAHDGLADLYVRTGRLEDAEAMFERRHDEDQGDVAVALSASRAFLAAGSAGRAVRWLGIGAARAAGLGRGELAERMRQKQETVRKRLS*
Ga0075163_121230342	3300006056	Wastewater Effluent	DRGDVAVALSASRAFLAAGSVSHAVRWLGVGVDRATELGRGDLANRLREMLGRVRERLS*
Ga0097621_1019824031	3300006237	Miscanthus Rhizosphere	VRDGLADMYVTAGKLDLAESLFERRHDEDQWDVAVALTASRAFLAAGSVSHAVRWLGVGAARAASLGRNDLADRLRQKQDSVRKRLS*
Ga0075428_1018896712	3300006844	Populus Rhizosphere	STEAGWRDRVAAVRDGLASAYVIAGRYEEGHALFERRHFEDPGDVAVALSASRSFLAAGVLSRAIQWLDIGIGRARSLGRGELASVLIDKQAALRRRLS*
Ga0075524_101010341	3300006950	Arctic Peat Soil	AEALFERRHDEDQGDVAVALSASRAFLAAGSVSHAVRWLGVGAARAAALGRDELAQRLRAKQEVVRRRLS*
Ga0079219_112946672	3300006954	Agricultural Soil	YVSAGRLDQAEALFERRHDEDQGDVAVALSASRAFLAAGSISHAVRWLGIGAGRAAMLGREELASRLRTKQERVRERLS*
Ga0079219_118991091	3300006954	Agricultural Soil	AEALFERRHDEDQRDVAVALSASRAFLASGAISRAVRWLGIGAARAAGLGRGELAERLRQKQETVRKRLS*
Ga0075419_101721503	3300006969	Populus Rhizosphere	GRIDDAQALFERRHAEDRGDVAVALSASRAFLAAGSVSHAVRWLGVGAARAADLGRDELAERLRQKQERVRERLS*
Ga0079218_133212831	3300007004	Agricultural Soil	ELFERRHDEDQGDVAVALSASRAFLAAGAVGHAVRWLGVGAARAHALGRGELARRLLEKQESVRRRMS*
Ga0105245_126184122	3300009098	Miscanthus Rhizosphere	IGAVRDGLADFYVSVHQIDKAEALFETRHEEDRADVAVALTASRAFLAAGSISHSVRWLGIAAVRAQTLGRDELATRLRQKQESVRKRLS*
Ga0114129_119331732	3300009147	Populus Rhizosphere	LTARVGAVRDGLADFYVSAGMIDEANALFERRHEEDRDDVAVALSASRAFLAAGSISHAVRWLGVGAGRAQALGRDELANRLRQKQEAVRKRLS*
Ga0134109_104234831	3300010320	Grasslands Soil	EDFVAAYAGALSQVPGAAERVGAVRDGLADFYVSAGRLDQAEALFERRHDEDQGDVAVALSASRAFLAAGSISHAVRWLGIGAGRAATLGRDELASRLRTKQERVRERLS*
Ga0126372_108941822	3300010360	Tropical Forest Soil	GKDQVDRAVRAYEDFAAAYAGALGALPNGAERVGAVRDGLADFYVSAGRLDDAEALFERRHDEDRGDVAVALSASRAFLAAGSISHAVRWLGVGAVRAATLGRNELADRLRIKQERVRERLS*
Ga0134127_125852711	3300010399	Terrestrial Soil	DGLADFYVSAGLLDQAEALFARRHDEDQGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAATLGRDELASRLRTKQERVRERLS*
Ga0134122_113562911	3300010400	Terrestrial Soil	FVTAYALALTGTPHGAERIGAARDGLADFYVSVRRFDDAESLFERRHHEDQGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAATLGRGEMASRLRSKQQRVRERLI*
Ga0134123_108755861	3300010403	Terrestrial Soil	FVAAYARALGEVPHGAERVGAVRDGLADFYVSAGRLDEAEALFERRHDEDRGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAKTLGRDEMASRLRTKQERVRERLS*
Ga0134123_117780691	3300010403	Terrestrial Soil	FVAAYAGALGAVPNGAERVGAVRDGLADFYVSAGRLDDAEALFERRHDEDRGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAAMLGRDELAGRLRRKQERVRERLS*
Ga0157290_103294022	3300012909	Soil	ALAGFPHGAVRIGAVRDGLADLYVSAGRLEDAEALFERRHGEDQGDVAVALSASRAFLAAGSVGRAVHWLGIGAARAAGLGRGELAARLRQKQEAVRKRLS*
Ga0153916_126154402	3300012964	Freshwater Wetlands	RIGAMRDGLADLYVTAGMIDSAEKLFETRHEEDHRDVAVALSASRAFLAAGSISHAVRWLGIGAVRAQELGRSDLANRLRQKQDSVRKRLS*
Ga0157378_126922961	3300013297	Miscanthus Rhizosphere	YVSAGRLDEAEALFERRHEEDRDDVAVALSASRAFLAHGSLSHAVRWLGVGALRAAMLGREELAKRLRTKQERVRERLS*
Ga0181534_105382872	3300014168	Bog	QIPHGNKRIAAVRDGLADFYVSAGMIDAAEALFEKRHEEDPGDVAVALTASRAFLAAGSISHAVRWLGIGAARARVLGRDALATKLSDKQQAVRRRLS*
Ga0181534_107102191	3300014168	Bog	DDRVVTTYEKFVDDYARTLANEMHGAARIGAARDGLADFYVRVGRLDQAQELFERRHDEDQNDVAVALSASRAFLAAGSVSHAVRWLGIGAARAAGLGRNELATRLRDKQDAVRRRLS*
Ga0157377_115140271	3300014745	Miscanthus Rhizosphere	KAYEEFADAYAHALSAQPGGTARIGAMRDGLADLLVSAGQLDRAEAMFERRHEEDHRDVAVALSASRAFLAAGSVSRAMRWLGIGAARATELGRKELADKLTQKQESLRKRLS*
Ga0167669_11493551	3300015024	Glacier Forefield Soil	YEEFTDAYTASLATMPHGAPRIGAMRDGLADMYVSAGLLDRAEAMFERRHEEDHGDVAVALSASRAFLAAGSVSRALKWLGIGAVRAQELGKTDLAEKLHQKQESLRKRLS*
Ga0137403_108910831	3300015264	Vadose Zone Soil	EMDRAVRVYEDFVAAYARVLGQVMHGAERVGAVRDGLADFYVSAGRLDDAEALFERRREEDRGDVAVALSASRAFLAAGSISHAVRWLGVGAVRAATLGRDELATRLRTKQARVRARLS*
Ga0137403_111392292	3300015264	Vadose Zone Soil	GGGARVRAVRDGLADFYVSAGRLDEAEALFTTRHEEDRGDVAVALSASRAFLAAGSLSHAVRWLGVAAGRATTLGRNELANRLRSKQARVRDRLS*
Ga0132257_1021936721	3300015373	Arabidopsis Rhizosphere	YVSAGMIDQAEELFERRHEEDLGDVAVALSASRAFLAAGSISHAVRWLGIGAGRAHALGRSELADRLRKKQEAVRKRLS*
Ga0193601_11464841	3300018931	Soil	GRIDQAQALFERRHDEDQGDVAVALSASRAFLAAGSVSHAVRWLGVGAARAQALGRGALADKLRQKQERVRERLS
Ga0193726_12221111	3300020021	Soil	GAMRDGRADVYVTAGMLDRAEALFEKRHEEDHRDVAVALSASRAFLAAGSVSRAMRWLGIGAARAQELGRDDLAKRLQEKQDALRKRLS
Ga0193752_10598471	3300020027	Soil	TPGGLERIGAARDGLADFYVSAGRLDDAEALFERRHDEDRGDVAVALTASRAFLAAGSVSRAVRWLGVGAQRATALGREDLAERLRQKQERVRERLS
Ga0210391_111092552	3300021433	Soil	GLADFYVRVGRLDQAQELFERRHDEDQNDVAVALSASRAFLAAGSVSHAVRWLGMGAARAAGLGRDDLATRLRDKQDAVRRRLS
Ga0179589_106045371	3300024288	Vadose Zone Soil	RVGAVRDGLADFYVSAGRLDEAEALFERRHDEDRGDVAVALSASRAFLAAGSISHAVRWLGVGAVRAATLGRDELANRLRSKQERVRERLS
Ga0209512_12108281	3300025153	Glacier Valley	TASLATMPHGAPRIGAMRDGLADMYVSAGLLDRAEAMFERRHEEDHGDVAVALSASRAFLAAGSVSRALKWLGIGAVRAHELGKRDLAEKLQQKQDSLRKRLS
Ga0207684_102080731	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VKAYEDFSEAYAKALSRIPHGNTRVGAVRDGLADFYVSAGMTDQANALFERRHEEDRDDVAVALSASRAFLAAGSISHAVRWLGVGAGRAQALGRDDLATRLRQKAEAVRKRLS
Ga0207709_114499371	3300025935	Miscanthus Rhizosphere	RRPADFYVSAGRLDEAEALFERRHEEDRDDVAVALSASRAFLAHGSLSHAVRWLGVGALRAAMLGREELAKRLRTKQERVRERLS
Ga0207670_100230331	3300025936	Switchgrass Rhizosphere	GALGHVPGGPERVGAVRDGLADFYVSAGRLDEAEALFERRHDEDRGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAKTLGRDEMASRLRTKQERVRERLS
Ga0207670_113487622	3300025936	Switchgrass Rhizosphere	FERRHDEDQGDVAVALSASRAFLAAGSVSHAVRWLGVGAARAAGLGRADLARRLREKQDTVRKRLS
Ga0207691_117362632	3300025940	Miscanthus Rhizosphere	LADFYVSAGRLDEAEALFERRHEEDRDDVAVALSASRAFLAHDSLSHAVRWLGVGALRAAMLGREELAKRLRTKQERVRERLS
Ga0207689_101456423	3300025942	Miscanthus Rhizosphere	VPGAAERVGAVRDGLADFYVSAGRLDQAEALFERRHDEDQGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAKTLGRDEMASRLRTKQERVRERLS
Ga0207667_106200452	3300025949	Corn Rhizosphere	FVDAYAAALGQVPHGAARVGATRDGLADLYVTAGMIDRANALFERRHEEDRGDVAVALSASRAFLAAGNVSHAVRWLGIGAGRAQALGRTELAQKLRDKQASVRKRLS
Ga0207677_105978792	3300026023	Miscanthus Rhizosphere	RAYEDFVAAYARTLGAIPHGAARVGAVRDGLADFYVSAGRLDDAEALFERRHEEDRGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAATLGRDELAGRLRRKQERVRERLS
Ga0207703_115126092	3300026035	Switchgrass Rhizosphere	DGLADFYVSAGRLDQAEALFERRHDEDRGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAATLGRDELANRLRTKQARVRARLS
Ga0207676_118174131	3300026095	Switchgrass Rhizosphere	RTVKTYEEFVDAYTRALSRVPHGNRRVGAVQDGLADFYVSAGMIDEANTLFERRHEEDREDVAVALSASRAFLAAGSISHAVRWLGVAAGRAQSLGRDELATRLRQKCEAVRKRLS
Ga0207674_105670171	3300026116	Corn Rhizosphere	RAVRAYEDFVAAYAWALRGVGHGPERIGAARDGLADFYVSAGRLDEAEALFERRHDEDRGDVAVALSASRAFLAAGSISHAVRWLGVGAVRAQVLGRDDLATRLRAKQERVRERLS
Ga0268264_126339811	3300028381	Switchgrass Rhizosphere	DFYVSAGRLDEAEALFERRHDEDRGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAATLGREELASRLRTKQERVRERLS
Ga0302258_11661712	3300028770	Fen	ELLAQLARDQVELAVLIYERFVTAYAQALSGVPHGAERVGAARDGLADFYVSVRRFDEAEALFDRRHQEDQGDVAVALSASRAFLAAGSISHAVRWLGIGAVRATTLGRGDLATRLRTKLERVRERLS
Ga0307503_104666722	3300028802	Soil	PHGSARIGAMLDGLADVYVTAGMTDEAEALFERRHEEDTNDVAVALSASRAFLAAGSISHAVRWLGVGAGRAQSLGRSELADRLRQKQEAVRKRLS
Ga0311365_108594771	3300029989	Fen	TLFDRRHDEDQGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAATLGRGELASRLRTKQERVRERLS
Ga0311365_112925372	3300029989	Fen	TALFEMRHGNIALILLVAHLEQRDVAEALTASRAFLAAGKISHAVRWLGVGAMRATMLGREDMAKRLRAKQDAVRKRLS
Ga0311337_119612941	3300030000	Fen	HVPHSADRVGAARDGLADFYVSAGKYDEAETLFDRRHDEDQGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAATLGRGELASRLRTKQERVRERLS
Ga0302286_102810452	3300030047	Fen	VLIYEWFVTAYAQALSGVPHGAERVGAARDGLADFYVSVRRFDEAEALFDRRHQEDQGDVAVALSASRAFLAAGSISHAVRWLGIGAVRATTLGRGDLATRLRTKLERVRERLS
Ga0302255_10530022	3300030050	Fen	ERFVTAYAQALSGVPHGAERVGAARDGLADFYVSVRRFDEAEALFDRRHQEDQGDVAVALSASRAFLAAGSISHAVRWLGIGAVRATTLGRGDLATRLRTKLERVRERLS
Ga0311349_108478862	3300030294	Fen	EDQRDVAVALTASRAFLAAGKISHAVRWLGVGAMRATMLGREDMAKRLRAKQDAVRKRLS
Ga0311349_120363482	3300030294	Fen	RLTLFPYTTLFRLDFDVAVKAYEEFCDAYVHALSAVPLGAERAGAMRDGLADVYVTAGMLDRAEALFERRHEEDHRDVAVALSASRAFLAAGSVSRAMRWLGIGATRAQELGRADLAKRLQDKQDALRKRLS
Ga0299915_108798372	3300030613	Soil	TIETYEEFVAAYARTLIHVPHGQERIGAVRDGLADFYVSAGRLDAAEALFERRHDEDRGDVAVALSASRAFLAAGSVSHAVRWLGVGVQRATALGREDLAERLRQKQDRVRERLS
Ga0311335_110611841	3300030838	Fen	AERVGAARDGLADFYVSVRRFDEAEALFDRRHQEDQGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAATLGRGELASRLRTKQERVRERLS
Ga0302323_1012507261	3300031232	Fen	LFERRHEEDHRDVAVALSASRAFLAAGSVSRAMRWLGIGATRAQELGRADLAKRLQDKQDALRKRLS
Ga0302323_1023483762	3300031232	Fen	GAVRDGLADVYVSVGMLDEATALFEMRHEEDQRDVAVALTASRAFLAAGKISHAVRWLGVGAMRATMLGREDMAKRLRAKQDAVRKRLS
Ga0265332_100487461	3300031238	Rhizosphere	AGRHDDAETLFERRHEEDRGDVAVALTASRAFLAAGSVSRAVRWLGIGAVRAATLGRKELAGRLRSTQERVRERLS
Ga0265328_102622781	3300031239	Rhizosphere	YEDFVAAYARALGQIPHGAARVGAVRDGLADFYVSAGRHDDAETLFERRHEEDRGDVAVALTASRAFLAAGSVSRAVRWLGIGAVRAATLGRKELAGRLRSTQERVRERLS
Ga0311364_115508681	3300031521	Fen	VHALSAVPLGAERAGAMRDGLADVYVTAGMLDRAEALFERRHEEDHRDVAVALSASRAFLAAGSVSRAMRWLGIGATRAQELGRADLAKRLQDKQDALRKRLS
Ga0311364_115549982	3300031521	Fen	FAAAYAVGLEGRQHGRERVGAVRDGLADVYVSVGMLDEATALFEMRHEEDQRDVAVALTASRAFLAAGKISHAVRWLGVGAMRATMLGREDMAKRLRAKQDAVRKRLS
Ga0310888_111093711	3300031538	Soil	VPHGAARIGAIRDGLADVYVTAGMIEEAEALFETRHEEDTNDVAVALSASRAFLAAGSISHAVRWLGVGAGRAQALGRTELADRLRQKQEAVRKRLS
Ga0302321_1005189502	3300031726	Fen	YEAFAAAYAVGLEGRQHGRERVGAVRDGLADVYVSVGMLDEATALFEMRHEEDQRDVAVALTASRAFLAAGKISHAVRWLGVGAMRATMLGREDMAKRLRAKQDAVRKRLS
Ga0302321_1029144442	3300031726	Fen	RRHDEDQGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAATLGRDELANRLRTKQARVRGRLS
Ga0307468_1003127584	3300031740	Hardwood Forest Soil	FADNYRELIPTVTDWSERVAAVRDGLADAYVTAGRIDQAERLFSERHAEDTRDVAVALSASRAFLAAGATSHAVHWLGLAARRAEDLGRTDFAKILQDKQATIRKRLS
Ga0302322_1000655641	3300031902	Fen	HFLELLMGRAGGDTARVVAVYEAFAAAYAVGLEGRQHGRERVGAVRDGLADVYVSVGMLDEATALFEMRHEEDQRDVAVALTASRAFLAAGKISHAVRWLGVGAMRATMLGREDMAKRLRAKQDAVRKRLS
Ga0302322_1013470401	3300031902	Fen	ARALEGVPHGAERIGAMRDGLADFYVSAGRTEAAEALFEQRHDEDQGDVAVALSASRAFLAAGSVSHAVRWLGVGAARAAALGRVELADRLRKKQEAVRRRLS
Ga0306921_124492791	3300031912	Soil	VYEAFVAAYAAALGHEPGSRARVSAVRDGLADFYVSAGRLDEAEALFERRHEEDRGDVAVALSASRAFLAAGSTGRAVRWLGLGAGRAQTLGRPELASRLRNKQARVRERLS
Ga0311367_106993711	3300031918	Fen	EAEALFERRHEEDQGDVSVALSASRAFLAAGSISHAVRWLGIGAVRASTLGRAELASRLHSKQERVRERLS
Ga0310884_109977531	3300031944	Soil	DGLADFYVSAGKIDEAEALFEQRHEEDRNDVAVALTAARAFLAAGSISHAVRWLGVGAGRAQGLGRDELANRLRQKQESVRKRLS
Ga0335081_119104212	3300032892	Soil	LMIELGRGDLERTVRTYEDFVAEYARVLSEIPHGATRVGAVRDGLADFYVSARLFDRANELFECRHEEDRNDVAVALTASRAFLAAGSFGQAVRWLGIGAARAQGLGRGELATRLRQKQDAVRKRMS
Ga0316605_100422211	3300033408	Soil	ERIGAVADGLADFYVRAGRIDQAQALFERRHDEDQGDVAVALSASRAFLAAGSVSHAVRWLGVGAARAAALGRVELAVKLRSKQERVRERLS
Ga0310810_107689581	3300033412	Soil	GMIEEANELFEIRHEEDRDDVAVALSASRAFLAAGSISHAVRWLGVGAGRAQALGRDELANRLRQKAEAVRKRLS
Ga0316603_100274533	3300033413	Soil	IKTYEDFVAAYARALVDIPHGHERIGAVRDGLADFYVSAGRIDEAEALFERRHDEDRGDVAVALSASRAFLAAGSVSHAVRWLGVGAQRATALGREELAERLRQKQGRVRERLS
Ga0316624_103862282	3300033486	Soil	YEDFVAAYARTLGQVPHGAARVGAVRDGLADFYVSAGRVEDAEALFERRHEEDRGDVAVALSASRAFLAAGSISHAVRWLGIGAVRAATLGRGELASRLRHKQARVRERLS
Ga0316624_105695742	3300033486	Soil	QANTLFETRHEEDREDVAVALTASRAFLAAGSISHAVRWLGVAAGRAQTLGRGELATRLRQKQDAVRKRLS
Ga0316630_122067062	3300033487	Soil	ERIGAVKDGLADFYVSAGRTDRAEALFEQRHDEDQGDVAVALSASRAFLAAGSVSRAVRWLGVGAARASALGREELAEKLRQKQESVRKRLS
Ga0316628_1004297443	3300033513	Soil	KLFERRHEEDRRDVAVALSASRAFLAAGSISHAVRWLGIGVVRAQELGRAELATRLRAKQDAVRKRLS
Ga0247829_102694792	3300033550	Soil	RGLASFLHGAPRIRAVRDGLADFYVFAGRTDAAEELFERRHDEDQGDVAVALSASRAFLAAGSVGHAVRWLGVGAARAQALGRDELAQRLRSKQEAVRKRMS
Ga0247830_112476392	3300033551	Soil	AYARALSRVPHGSARVGAVRDGLADVYVSAGMIEQAEELFERRHEEDRDDVAVALSASRAFLAAGSISHAVRWLGVGAGRAQALGRDELAARLRQKQEAVRKRLS
Ga0370487_0088325_2_310	3300034170	Untreated Peat Soil	VGLEGSQHGRERVGAVRDGLADVYVSVGKLDEATALFEMRHEEDQRDVAVALTASRAFLAAGKISHAVRWLGVGAMRATMLGREDMAKRLRAKQDAVRKRLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103442

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences