Basic Information | |
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Family ID | F103406 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 101 |
Average Sequence Length | 52 residues |
Representative Sequence | MFEELIDRLTAILLSIEDDVSSEIIIELEDIINSLENSKCSNGMFCGMDKKW |
Number of Associated Samples | 72 |
Number of Associated Scaffolds | 101 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 83.17 % |
% of genes near scaffold ends (potentially truncated) | 21.78 % |
% of genes from short scaffolds (< 2000 bps) | 80.20 % |
Associated GOLD sequencing projects | 63 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.58 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (58.416 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (50.495 % of family members) |
Environment Ontology (ENVO) | Unclassified (95.050 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (88.119 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 38.75% β-sheet: 2.50% Coil/Unstructured: 58.75% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.58 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Deep Ocean Seawater Marine Marine Seawater Marine Background Seawater Marine Seawater Marine Marine, Hydrothermal Vent Plume Seawater |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
LPaug08P261000mDRAFT_10095385 | 3300000157 | Marine | MFEELINKLTAILLAIEDDVSSEVIQELEDIIESLEESKCSNDMFCGMDKKF* |
LPjun09P16500mDRAFT_10537812 | 3300000179 | Marine | MFEELLNRLTAILLSIEDDVSSDVIIELEDIINSIENSKCKNDMFCGMDKKW* |
LPjun09P12500mDRAFT_10746873 | 3300000222 | Marine | MFEELLNRLTAILLSIEDDVSSDVIQELEDVIQSLEESKCSNG |
JGI25129J35166_10105441 | 3300002484 | Marine | ILQEIEQNASNEKELVSELEDIIDSLKNSKCSNDMFCGMDKKW* |
JGI25129J35166_10836573 | 3300002484 | Marine | EIEQNASNEKELVSELEDIIDSLKNSKCSNGMFCGMDKKW* |
JGI25131J35506_10011698 | 3300002511 | Marine | MFEELLNRLTAILLSIEDDVSSEVIIELEDIINSIENSKCSNDMFCGMDKKW* |
JGI25133J35611_100599304 | 3300002514 | Marine | MFEELIDRLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNGMFCGMEKKW* |
JGI25134J35505_100271801 | 3300002518 | Marine | MFEELIDRLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNDMFCGMDKKW* |
PicMicro_100365854 | 3300003702 | Marine, Hydrothermal Vent Plume | MFKKLIEKLMFILQSIENDVSPEIVLELKDIINSIGNSKCSNDMFCGMDKKW* |
Ga0066867_101945692 | 3300005400 | Marine | MFEELIGRLTDILQEIEQNASNEKELVSELEDIIDSLKNSKCSNGMFCGMDKKW* |
Ga0066855_100240882 | 3300005402 | Marine | MFEELLNRLTAILLSIEDDVSSEVIIELEDIINSIENSKCKNDMFCGMDKKW* |
Ga0066855_100989171 | 3300005402 | Marine | MFEELLNRLTAILLSIEDDVSSEVIIELEDIINSIENSKCSNDMFCGMDKKF* |
Ga0066855_102908942 | 3300005402 | Marine | AILLSIEDDVSSEVIIELEDIINSIENSKCSNDMFCGMDKKW* |
Ga0066848_101236302 | 3300005408 | Marine | MFEELIDRLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNGMFCGMDKKW* |
Ga0066859_100714043 | 3300005425 | Marine | VFEELIKKLTAILLSIEDVVPSEVIIELEDIIRSLEESKCSNDMFCGMDKKF* |
Ga0066851_100312292 | 3300005427 | Marine | MFEELIDRLTAILQEIEQNASNEKELVSKLEDIIDSLKNSKCSNGMFCGMDKKF* |
Ga0066863_100234617 | 3300005428 | Marine | LTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNDMFCGMDKKW* |
Ga0066854_100408441 | 3300005431 | Marine | MFEELIERLMSILRDIENDASPEIVSELKDIINSLGNSECKNGMFCGMDKKWL* |
Ga0066854_100499363 | 3300005431 | Marine | MFEELLNRLTAILLSIENDVTSDIIIELEDIINSLENSKCSNDMFCGMDKKW* |
Ga0066854_101933951 | 3300005431 | Marine | GYRIMFEELLNRLTAILLSIEDDVSSEIVIELEDIINSLENSKCKNDMFCGMDKKW* |
Ga0066868_100349462 | 3300005508 | Marine | MFEELIGRLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNGMF* |
Ga0066866_100783433 | 3300005514 | Marine | MFEELIDRLTVILQEIEQNASNEKELVSKLEDIIDSLKNSKCSNGMFCGMDKKF* |
Ga0066844_100706972 | 3300005567 | Marine | MFEELMNKLSAILLSIEDVVPSDVIIELENIIQSLEESKCSNDMFCGMDKKF* |
Ga0066853_102699511 | 3300005603 | Marine | MFEELLNRLTAILLSIEDDVSSEIIIELEDIINSLENSKCKNGMFCGMDKKW* |
Ga0066842_100546142 | 3300005658 | Marine | VFEELIKKLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNGMFCGMDKKW* |
Ga0066381_101321602 | 3300005945 | Marine | MFEELMNKLTAILLSIEDVVPSDVIIELENIIQSLEESKCSNDMFCGMDKKF* |
Ga0066368_100113347 | 3300006002 | Marine | MFEELLNRLTAILLSIEDDVSSEIVIELENIINSLENSKCSNNMFCGMDKKW* |
Ga0066375_100175961 | 3300006019 | Marine | MFEELLNRLTAILLSIEDDVSSEVVIELEDIINSIENSKCKNDMFCGMDKKW* |
Ga0066375_100590954 | 3300006019 | Marine | MFEKLIKKLMSILQSVENDVSQEIVSELKDIINSLENSKCSNDMFCGMDKKW* |
Ga0082018_10188603 | 3300006091 | Marine | MFEELLNRLTAILLSIEDDVSSEIIIELEDIINSLENSKCKNDMFCGMDKKW* |
Ga0068471_13365791 | 3300006310 | Marine | MFEELLNRLTAILLSIEDDVSSDVIRELEDVIQSLEESKCSN |
Ga0068501_12605721 | 3300006325 | Marine | MFEELLNRLTAILLSIEDDVPSDVVIELEDIINSIENSKCKNDMFCGMDKKW* |
Ga0068483_12329462 | 3300006330 | Marine | MFEELLNRLTAILLSIEDDVSSEVIIELEDIINSIENSKCSNDMFCG |
Ga0068482_11453774 | 3300006338 | Marine | MFEELLNRLTAILLSIEDDVSSEVIIELEDIINSLENSKCKNDMFCGMDKKW* |
Ga0068482_12791973 | 3300006338 | Marine | MFEELIGRLKSILREIEQNAPNEKVVILELKDIIDSLENSKCSNDMFCGMDKKF* |
Ga0068481_12178633 | 3300006339 | Marine | MFEQLIDRLKAILREIEQYASGEYIVIEELKDIINSLENSKCSNDMFCGMDKKF* |
Ga0098033_10069964 | 3300006736 | Marine | MFEKLIEKIMAVLQSIENDVSQEITKELKDIIDLLENSKCSNGMFCGMDKKW* |
Ga0098033_10230404 | 3300006736 | Marine | MFEELIDRLTAILLSIEDDVSSEIIIELEDIINSLENSKCKNDMFCGMDKKW* |
Ga0098035_10871035 | 3300006738 | Marine | VFEELIKKLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNDMFCGMDKKW* |
Ga0098058_10503862 | 3300006750 | Marine | MFEELIDRLTAILLSIEDDVSSEIIIELEDIINSLENSKCSNGMFCGMDKKW* |
Ga0098058_10848401 | 3300006750 | Marine | EKIMAVLQSIENDVSQEITKELKDIIDLLENSKCSNGMFCGMDKKW* |
Ga0098058_11485432 | 3300006750 | Marine | VFEELIKKLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNGMFCGMDKKF* |
Ga0066376_102919094 | 3300006900 | Marine | MFEELIEKLMSILQGIENNVSQEIVSELKDIINSLENSKCSNDMFCGMDKKW* |
Ga0105020_100053255 | 3300007514 | Marine | MFEKLIEKIMSVLQSIENDVSQEITKELKDIIDLLENSKCSNGMFCGMDKKW* |
Ga0105668_10859382 | 3300007758 | Background Seawater | MFEELMNKLTAILLAIEDDVSSEVIQELEDIIQSLEESKCSNDMFCGMDKKW* |
Ga0114898_11220573 | 3300008216 | Deep Ocean | ELIDRLKSILREIEQYASGEYVVIEELKDIINSLENSKCSNDMFCGMDKKW* |
Ga0115658_11291443 | 3300008629 | Marine | MFEKLIEKIMSVLQSIENDVSQEIVQELKDIINLLENSKCSNDMFCGMDKKW* |
Ga0114906_12615521 | 3300009605 | Deep Ocean | MFKELIDRLKSILREIEQYASGEYVMIEELKDIINSLENSKCSNDMFCGMDKKW* |
Ga0163108_103216542 | 3300012950 | Seawater | VFEEQIKKLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNDMFCGMDKKW* |
Ga0181374_10328423 | 3300017702 | Marine | KVIIVFEELIKKLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNDMFCGMDKKW |
Ga0181432_10032472 | 3300017775 | Seawater | MFEELMNKLTAILLAIEDDVSSDVIQELEDIIESLEESKCSNDMFCGMDKKF |
Ga0181432_10490462 | 3300017775 | Seawater | MFEELLNRLTAILLSIEDDVSSDVIRELEDVIQSLEESKCSNGMFCGMDKKW |
Ga0181432_10610584 | 3300017775 | Seawater | YRIMFEELLNKLTAILLSIEDDVSSEIVIELEDIINSLENSKCKNDMFCGMDKKW |
Ga0181432_11131003 | 3300017775 | Seawater | MFEELIGRLTAILREIEQNASNEKEVISELEDVIYSLKNSKCKNDMFCGMDKKW |
Ga0181432_11153641 | 3300017775 | Seawater | MFEQLIDRLKAILREIEQYASGEYIVIEELKDIINSLENSKCSNDMFCGMDKKW |
Ga0181432_12158991 | 3300017775 | Seawater | LLNRLTAILLSIENDVTSDIIIELEDIINSLENSKCKNDMFCGMDKKW |
Ga0211656_101161963 | 3300020375 | Marine | MFEELLNRLTAILLSIEDDVSSDVIIELENIIRSLEESKCSNDMFCGMDKKF |
Ga0211575_101742453 | 3300020407 | Marine | MFEKLIEKITDILLTIEDDVSIEIIQELESIIKSLENSKCKNDMFCGMDKKW |
Ga0211603_102156371 | 3300020427 | Marine | MFEKLIEKIMSVLQSIENDVSQEITKELRDIIDLLENSKCSNGMFCGMDKKW |
Ga0211603_102975643 | 3300020427 | Marine | MFEELIGRLEAILREIEQNASNEKEVISELEDIINSLENSKCKNDMFCGMDKKW |
Ga0211639_104810742 | 3300020435 | Marine | MFEELMNKLSAILLSIEDVVPSDVIIELENIIRSLEESKCSNDMFCGMDKKF |
Ga0206685_101926991 | 3300021442 | Seawater | MFEKLIEKITDILLTIEDDVSIEIIQELESIIKSLENSKCKNDMFCG |
Ga0187833_101626722 | 3300022225 | Seawater | MFEKLIEKIMAVLQSIENDVSQEITKELKDIIDLLENSKCSNGMFCGMDKKW |
Ga0187833_102287521 | 3300022225 | Seawater | VFEELIKKLTAILLSIEDVVPSEVIIELEDIIRSLEESKCSNDMFCGMDKKF |
Ga0187833_104329083 | 3300022225 | Seawater | MFEELIDRLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNGMFCGMDKKW |
Ga0187827_100972271 | 3300022227 | Seawater | VFEELIKKLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNDMFCGMDKKW |
Ga0207902_10441463 | 3300025046 | Marine | LLSIEDDVSSEVIQELEDIIQSLEKSKCSNGMFCGMDKKW |
Ga0208920_10013962 | 3300025072 | Marine | VFEELIKKLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNGMFCGMDKKW |
Ga0209644_10787342 | 3300025125 | Marine | MFEELLNRLTAILLSIEDDVSSEVIIELEDIINSIENSKCSNDMFCGMDKKW |
Ga0209644_11501652 | 3300025125 | Marine | MFEELMNKLTAILLSIEDVVPSDVIIELENIIQSLEESKCSNDMFCGMDKKF |
Ga0209128_11444432 | 3300025131 | Marine | VFEELIKKLTAILLSIEDVVPSEVIIELEDIIRSLEESKCSNDMFCGMDKKW |
Ga0208299_12091951 | 3300025133 | Marine | MFEELIDRLTAILQEIEQNASNEKELVSKLEDIIDSLKNSKCSNGMFCGMDKKF |
Ga0209756_10966473 | 3300025141 | Marine | MFEELIDRLTAILLSIEDDVSSEIIIELEDIINSLENSKCSNGMFCGMDKKW |
Ga0208467_10102333 | 3300025265 | Deep Ocean | DILQEIEQNASNEKELVSELEDIIDSLKNSKCSNGMFCGMDKKW |
Ga0207894_10731511 | 3300025268 | Deep Ocean | MFEELIDRLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNGMFCGMDK |
Ga0209757_101635632 | 3300025873 | Marine | MFEELLNRLTAILLSIENDVTSDIIIELEDIINSLENSKCSNDMFCGMDKKW |
Ga0207963_10278073 | 3300026080 | Marine | MFEELLNRLTAILLSIEDDVSSEVVIELEDIINSIENSKCKNDMFCGMDKKW |
Ga0208113_10073419 | 3300026087 | Marine | MFEELLNRLTAILLSIEDDVSSEIVIELENIINSLENSKCSNNMFCGMDKKW |
Ga0208129_10352325 | 3300026193 | Marine | RIMFEELIDRLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNDMFCGMDKKW |
Ga0208129_11174762 | 3300026193 | Marine | RIMFEELIDRLTAILQEIEQNASNEKELVSELEDIIDSLKNSKCSNGMFCGMDKKW |
Ga0208131_10474762 | 3300026213 | Marine | MFEELLNRLTAILLSIEDDVSSEVIIELEDIINSIENSKCSNDMFCGMDKKF |
Ga0208522_10278811 | 3300026254 | Marine | IEQNASNEKELVSELEDIIDSLKNSKCSNDMFCGMDKKW |
Ga0207990_10344094 | 3300026262 | Marine | MFEELIERLMSILRDIENDASPEIVSELKDIINSLGNSECKNGMFCGMDKKWL |
Ga0208766_11435241 | 3300026269 | Marine | MFEELIDRLTVILQEIEQNASNEKELVSKLEDIIDSLKNSKCSNGMFCGMDKKF |
Ga0209554_11014091 | 3300027685 | Marine | MFEELIEKLMSILQGIENNVSQEIVSELKDIINSLENSKCSNDMFCGMDKKF |
Ga0257108_10086785 | 3300028190 | Marine | MFEELINKLTAILLAIEDDVSSEVIQELEDIIESLEESKCSNDMFCGMDKKF |
Ga0257108_10478383 | 3300028190 | Marine | MFEELMNKLTAILLAIEDDVSSEVIQELEDIIQSLEESKCSNDMFCGMDKKF |
Ga0257108_10594273 | 3300028190 | Marine | MFEELLNRLTAILLSIEDDVSSDVIIELEDIINSIENSKCKNDMFCGMDKKW |
Ga0257108_10771772 | 3300028190 | Marine | MFEELLNRLTAILLSIEDDVSSEVIIELEDIINSIENSKCKNDMFCGMDKKW |
Ga0257108_10968392 | 3300028190 | Marine | MFEELIKKLTSILRDIESESIRFHVPEIVSELKDIINSLEKSKCSNDMFCGMDKKW |
Ga0257107_10467153 | 3300028192 | Marine | MFEELLNRLTAILLSIEDDVSSDVIQELEDVIQSLEESKCSNGMFCGMDKKW |
Ga0310121_100596165 | 3300031801 | Marine | MFEELLNKLTAILLSIEDDVSSDVIRELEDVIQSLEESKCSNGMFCGMDKKW |
Ga0310121_101556002 | 3300031801 | Marine | MFEELLNRLTAILLSIEDDVPSDVVIELEDIINSIENSKCSNDMFCGMDKKW |
Ga0315329_100173726 | 3300032048 | Seawater | MFEELIKKLTSILQDIESESIRFHVPEIVSELKDIINSLEKSKCSNDMFCGMDKKW |
Ga0315329_105855691 | 3300032048 | Seawater | MFDELIERLKAILQEIEQNASNEKEVVSELEDIIDSLKN |
Ga0315338_10244153 | 3300032138 | Seawater | MFDELIERLKAILQEIEQNASNEKEVVSELEDIIDSLKNSKCSNDMFCGMDKKW |
Ga0310345_100352722 | 3300032278 | Seawater | MFEELLNRLTAILLSIEDDVPSDVVIELEDIINSIENSKCKNDMFCGMDKKW |
Ga0310345_101464774 | 3300032278 | Seawater | MFEQLIDRLKAILREIEQYASGEYIVIEELKDIINSLENSKCSNDMFCGMDKKF |
Ga0310345_103749341 | 3300032278 | Seawater | KIINTYIKRGYVIMFDELIERLKAILQEIEQNASNEKEVVSELEDIIDSLKNSKCSNDMFCGMDKKW |
Ga0310345_111698642 | 3300032278 | Seawater | MFEKLLNRLTAILLSIENDVTSDIIIELEDIINSLENSKCSNDMFCGMDKKW |
Ga0310342_1002519436 | 3300032820 | Seawater | MFDELIERLKAILQEIEQNVSNEKEVVSELEDIIDSLKNSKCSNDMFCGMDKKW |
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