NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F103399

Metagenome Family F103399

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103399
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 59 residues
Representative Sequence DEFYFIAHWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRYHYKDGKIQGEWSTPMEDEE
Number of Associated Samples 61
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 89.11 %
Associated GOLD sequencing projects 51
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (34.653 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(35.644 % of family members)
Environment Ontology (ENVO) Unclassified
(70.297 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(86.139 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 38.64%    Coil/Unstructured: 61.36%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF02142MGS 12.87
PF02700PurS 11.88
PF00586AIRS 6.93
PF01555N6_N4_Mtase 4.95
PF04851ResIII 3.96
PF00551Formyl_trans_N 2.97
PF00004AAA 2.97
PF137592OG-FeII_Oxy_5 0.99
PF02543Carbam_trans_N 0.99
PF13439Glyco_transf_4 0.99
PF05869Dam 0.99
PF01370Epimerase 0.99
PF02769AIRS_C 0.99
PF03414Glyco_transf_6 0.99
PF03721UDPG_MGDP_dh_N 0.99
PF03215Rad17 0.99
PF02540NAD_synthase 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG1828Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunitNucleotide transport and metabolism [F] 11.88
COG0863DNA modification methylaseReplication, recombination and repair [L] 4.95
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 4.95
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 4.95
COG0171NH3-dependent NAD+ synthetaseCoenzyme transport and metabolism [H] 0.99
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.99
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.99
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.99
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 0.99
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 0.99
COG2192Predicted carbamoyl transferase, NodU familyGeneral function prediction only [R] 0.99


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms65.35 %
UnclassifiedrootN/A34.65 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002231|KVRMV2_100021713All Organisms → Viruses → Predicted Viral1521Open in IMG/M
3300002231|KVRMV2_100339905All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae → Tequatrovirus588Open in IMG/M
3300002488|JGI25128J35275_1124012All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Pycnogonida → Pantopoda → Nymphonidae → Nymphon → Nymphon striatum514Open in IMG/M
3300005404|Ga0066856_10194530All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300005404|Ga0066856_10214321All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300005404|Ga0066856_10290384Not Available705Open in IMG/M
3300005404|Ga0066856_10296285All Organisms → Viruses697Open in IMG/M
3300006024|Ga0066371_10057157Not Available1129Open in IMG/M
3300006024|Ga0066371_10262232Not Available540Open in IMG/M
3300006332|Ga0068500_1078598All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2035Open in IMG/M
3300006332|Ga0068500_1595643Not Available718Open in IMG/M
3300006751|Ga0098040_1046222All Organisms → Viruses → Predicted Viral1361Open in IMG/M
3300006789|Ga0098054_1364175All Organisms → Viruses511Open in IMG/M
3300006924|Ga0098051_1169269All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae575Open in IMG/M
3300006928|Ga0098041_1190022All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae658Open in IMG/M
3300006928|Ga0098041_1242993Not Available574Open in IMG/M
3300006928|Ga0098041_1267190Not Available545Open in IMG/M
3300006928|Ga0098041_1311519All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae500Open in IMG/M
3300008219|Ga0114905_1150723Not Available775Open in IMG/M
3300009593|Ga0115011_10195557All Organisms → Viruses → Predicted Viral1491Open in IMG/M
3300009593|Ga0115011_10296667All Organisms → Viruses → Predicted Viral1227Open in IMG/M
3300009593|Ga0115011_10414928All Organisms → Viruses → Predicted Viral1051Open in IMG/M
3300009593|Ga0115011_10518013All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae949Open in IMG/M
3300009593|Ga0115011_11850258All Organisms → Viruses546Open in IMG/M
3300009790|Ga0115012_10207334All Organisms → Viruses → Predicted Viral1440Open in IMG/M
3300009790|Ga0115012_11406488Not Available595Open in IMG/M
3300009790|Ga0115012_11616798All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Neritesvirus → Neritesvirus scam8561Open in IMG/M
3300009794|Ga0105189_1013521Not Available756Open in IMG/M
3300010149|Ga0098049_1088293All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae974Open in IMG/M
3300011013|Ga0114934_10158424All Organisms → Viruses → Predicted Viral1066Open in IMG/M
3300011013|Ga0114934_10224891Not Available862Open in IMG/M
3300011013|Ga0114934_10334150All Organisms → Viruses680Open in IMG/M
3300012920|Ga0160423_10230774All Organisms → Viruses → Predicted Viral1284Open in IMG/M
3300012920|Ga0160423_10767867Not Available649Open in IMG/M
3300012952|Ga0163180_10745596Not Available761Open in IMG/M
3300012952|Ga0163180_10994199Not Available671Open in IMG/M
3300012953|Ga0163179_11842863All Organisms → Viruses553Open in IMG/M
3300017730|Ga0181417_1079012Not Available797Open in IMG/M
3300017757|Ga0181420_1211943Not Available559Open in IMG/M
3300017758|Ga0181409_1181580All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Palaemonvirus → Prochlorococcus virus PSSM7 → Prochlorococcus phage P-SSM7611Open in IMG/M
3300017759|Ga0181414_1116883Not Available700Open in IMG/M
3300017760|Ga0181408_1058121Not Available1028Open in IMG/M
3300017764|Ga0181385_1106357All Organisms → Viruses859Open in IMG/M
3300017764|Ga0181385_1116961Not Available814Open in IMG/M
3300017767|Ga0181406_1040362All Organisms → Viruses → Predicted Viral1453Open in IMG/M
3300017768|Ga0187220_1100192All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Palaemonvirus → Prochlorococcus virus PSSM7 → Prochlorococcus phage P-SSM7876Open in IMG/M
3300017768|Ga0187220_1116003All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300017768|Ga0187220_1171477Not Available655Open in IMG/M
3300020247|Ga0211654_1023976Not Available973Open in IMG/M
3300020250|Ga0211627_1033112All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae855Open in IMG/M
3300020294|Ga0211520_1014679All Organisms → Viruses → Predicted Viral1269Open in IMG/M
3300020294|Ga0211520_1019615All Organisms → Viruses → Predicted Viral1091Open in IMG/M
3300020308|Ga0211693_1024550All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM2 → Prochlorococcus phage P-SSM2662Open in IMG/M
3300020312|Ga0211542_1094461Not Available516Open in IMG/M
3300020365|Ga0211506_1134864All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium696Open in IMG/M
3300020379|Ga0211652_10171604Not Available661Open in IMG/M
3300020394|Ga0211497_10134779All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae974Open in IMG/M
3300020395|Ga0211705_10222179Not Available695Open in IMG/M
3300020411|Ga0211587_10018157All Organisms → Viruses → Predicted Viral3563Open in IMG/M
3300020411|Ga0211587_10137272All Organisms → Viruses → Predicted Viral1043Open in IMG/M
3300020411|Ga0211587_10170579All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae918Open in IMG/M
3300020411|Ga0211587_10192361All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300020419|Ga0211512_10083007All Organisms → Viruses → Predicted Viral1510Open in IMG/M
3300020421|Ga0211653_10325303All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300020421|Ga0211653_10385993Not Available603Open in IMG/M
3300020428|Ga0211521_10031740All Organisms → Viruses → Predicted Viral2876Open in IMG/M
3300020438|Ga0211576_10017711All Organisms → Viruses → Predicted Viral4368Open in IMG/M
3300020438|Ga0211576_10421624All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae681Open in IMG/M
3300020445|Ga0211564_10144565All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales1183Open in IMG/M
3300020445|Ga0211564_10193338Not Available1008Open in IMG/M
3300020464|Ga0211694_10386400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus599Open in IMG/M
3300020469|Ga0211577_10121024Not Available1792Open in IMG/M
3300020470|Ga0211543_10014761All Organisms → Viruses → Predicted Viral4484Open in IMG/M
3300020470|Ga0211543_10033358All Organisms → Viruses → Predicted Viral2793Open in IMG/M
3300020470|Ga0211543_10076069All Organisms → Viruses → Predicted Viral1736Open in IMG/M
3300020471|Ga0211614_10363344Not Available638Open in IMG/M
3300020472|Ga0211579_10009421All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes6644Open in IMG/M
3300020472|Ga0211579_10406698All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae771Open in IMG/M
3300020472|Ga0211579_10638456Not Available595Open in IMG/M
3300020472|Ga0211579_10802216All Organisms → Viruses520Open in IMG/M
3300020474|Ga0211547_10170198All Organisms → Viruses → Predicted Viral1124Open in IMG/M
3300020478|Ga0211503_10133312All Organisms → Viruses → Predicted Viral1440Open in IMG/M
3300024344|Ga0209992_10007099All Organisms → Viruses7677Open in IMG/M
3300024344|Ga0209992_10217460All Organisms → Viruses805Open in IMG/M
3300025110|Ga0208158_1082637Not Available764Open in IMG/M
3300025132|Ga0209232_1197621All Organisms → Viruses615Open in IMG/M
3300026077|Ga0208749_1029831All Organisms → Viruses → Predicted Viral1151Open in IMG/M
3300026258|Ga0208130_1051487All Organisms → Viruses → Predicted Viral1268Open in IMG/M
3300026292|Ga0208277_1042207All Organisms → Viruses → Predicted Viral1957Open in IMG/M
3300026292|Ga0208277_1260913Not Available518Open in IMG/M
3300027906|Ga0209404_10002115All Organisms → Viruses12552Open in IMG/M
3300027906|Ga0209404_11046898Not Available560Open in IMG/M
3300029787|Ga0183757_1006458All Organisms → Viruses → Predicted Viral3759Open in IMG/M
3300029787|Ga0183757_1038513Not Available924Open in IMG/M
3300031774|Ga0315331_10085673All Organisms → Viruses → Predicted Viral2339Open in IMG/M
3300031774|Ga0315331_10626317Not Available767Open in IMG/M
3300031774|Ga0315331_10818432All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Palaemonvirus → Prochlorococcus virus PSSM7 → Prochlorococcus phage P-SSM7648Open in IMG/M
3300031775|Ga0315326_10938379Not Available531Open in IMG/M
3300032032|Ga0315327_10308050Not Available994Open in IMG/M
3300032047|Ga0315330_10326149All Organisms → Viruses962Open in IMG/M
3300032073|Ga0315315_10854432All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Ahtivirus → Synechococcus virus SShM2825Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine35.64%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine30.69%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater10.89%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater6.93%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface4.95%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.97%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine1.98%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.98%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment1.98%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean0.99%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300005404Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205EnvironmentalOpen in IMG/M
3300006024Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_BEnvironmentalOpen in IMG/M
3300006332Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0200mEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300009794Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300020247Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556048-ERR598962)EnvironmentalOpen in IMG/M
3300020250Marine microbial communities from Tara Oceans - TARA_B100000475 (ERX555986-ERR599129)EnvironmentalOpen in IMG/M
3300020294Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556124-ERR599153)EnvironmentalOpen in IMG/M
3300020308Marine microbial communities from Tara Oceans - TARA_B100000530 (ERX556085-ERR599046)EnvironmentalOpen in IMG/M
3300020312Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX556125-ERR598977)EnvironmentalOpen in IMG/M
3300020365Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)EnvironmentalOpen in IMG/M
3300020379Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)EnvironmentalOpen in IMG/M
3300020394Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)EnvironmentalOpen in IMG/M
3300020395Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX555987-ERR599133)EnvironmentalOpen in IMG/M
3300020411Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)EnvironmentalOpen in IMG/M
3300020419Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)EnvironmentalOpen in IMG/M
3300020421Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020445Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)EnvironmentalOpen in IMG/M
3300020464Marine microbial communities from Tara Oceans - TARA_B100000530 (ERX556075-ERR599101)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300020471Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)EnvironmentalOpen in IMG/M
3300020472Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)EnvironmentalOpen in IMG/M
3300020474Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)EnvironmentalOpen in IMG/M
3300020478Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300026077Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B (SPAdes)EnvironmentalOpen in IMG/M
3300026258Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78 (SPAdes)EnvironmentalOpen in IMG/M
3300026292Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300032032Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315EnvironmentalOpen in IMG/M
3300032047Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KVRMV2_10002171353300002231Marine SedimentIVHWRRYASYTKEVYSDGQEEWCLEDMGESNPDRYQYKDGKIEGHWDTPMEEEE*
KVRMV2_10033990533300002231Marine SedimentWIKDEYYFIVHWRRYASYTKEVYSDGQEEWCLEDMGESNPDRYQYKDGKIEGHWDTPMEEDEYE*
JGI25128J35275_112401223300002488MarineEKTDWIKDEFYFIAHWRRYAIYKKEVYDDETYWNVEDMGESSPDRYCYKNGKIEEGWSTPMEDEE*
Ga0066856_1019453023300005404MarineTDWIKDEFYFIAHWRRYAIYKKEVYDDETYWNVEDMGESNPDRYCYKNGKIEEGWSTPMEDEE*
Ga0066856_1021432123300005404MarineFCEKTDWIKDEFYFIAHWRRYAIYKKEVYDGDESWCVEDMGESNPDRYCYKNGKIEEGWSTPMEDEE*
Ga0066856_1029038433300005404MarineFIVHWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRYYYKDGKIEEGWSTPMEDDE*
Ga0066856_1029628533300005404MarineIAHWRRYAIYKKEVYGDGDFEWCLEDMGASSPDRYHYKDGKIQGEWSTPMEDEE*
Ga0066371_1005715713300006024MarineAIYKKEVYGDDGEFEWCLEDMGASSPDRYYYKDGKIEEGWSTPMEDDE*
Ga0066371_1026223233300006024MarineFYFIVHWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRFFYKDGKIEEGWSTPMEDEE*
Ga0068500_107859843300006332MarineWRRYAIYKKEEYSDGEYEWCLEDMGESSPDRYYYKDGKIEGHWDTPMEEEE*
Ga0068500_159564333300006332MarineEYYFIVHWRRYAIYNKEVYEDGEEEWCLEDMGESSPDRYHYINGKIEGHWDTPMEEEE*
Ga0098040_104622253300006751MarineVNKNDWIKDEFYFIAHWRRYAIYKKYVYEDGEFDWNVEDMGESSPDRYCYKNGQIEEGWSTPMEDEE*
Ga0098054_136417513300006789MarineIYKKEVYGDDGEFEWCLEDMGASSPDRFFYKDGKIEEGWSTPMEDEE*
Ga0098051_116926933300006924MarineIAHWRRYAIYKKYVYEDGEFDWNVEDMGESSPDRYCYKNGKIEEGWSTPMEEEE*
Ga0098041_119002233300006928MarineHWRRYAIYKKYVYEDGDFDWNVEDMGASSPDRYHYKDGKIHGEWSTPMEDEE*
Ga0098041_124299313300006928MarineKDEFYFIAHWRRYAIYKKYVYEDGEFDWNVEDMGESSPDRYCYKNGQIEEGWSTPMEDEE
Ga0098041_126719023300006928MarineDEFYFIAHWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRYHYKDGKIQGEWSTPMEDEE
Ga0098041_131151933300006928MarineYFIAHWRRYAIYKKYVYEDGDFDWNVEDMGESSPDRYCYKNGKIEEGWSTPMEDEE*
Ga0114905_115072313300008219Deep OceanVHWRRYASYTKEVYSDGQEEWCLEDMGESNPDRYQYKDGKIEGHWDTPMEEDEYE*
Ga0115011_1019555713300009593MarineKDEFYFIAHWRRYAIYKKEVYDDETYWNVEDMGESSPDRYCYKNGKIEEGWSTPMEDEE*
Ga0115011_1029666743300009593MarineFIVHWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRFFYKDGKIEEGWSTPMEDDE*
Ga0115011_1041492843300009593MarineYFIAHWRRYAIYKKYVYEDGEFDWNVEDMGESSPDRYCYKNGKIEEGWSTPMEDEE*
Ga0115011_1051801333300009593MarineEFCEKTDWIKDEFYFIAHWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRYHYKDGKIQGEWSTPMEDEE*
Ga0115011_1185025813300009593MarineDEFYFIVHWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRFFYKDGKIEEGWSTPMEDEE
Ga0115012_1020733463300009790MarineFIAHWRRYAIYKKYVYEDGDFDWNVEDMGESSPDRYCYKNGKIEEGWSTPMEDEE*
Ga0115012_1140648823300009790MarineFIVHWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRYFYKDGKIEEGWSTPMEDEE*
Ga0115012_1161679813300009790MarineRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRYHYKDGKIHGEWSTPMEEEE*
Ga0105189_101352133300009794Marine OceanicWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRYYYKDGKIEGHWDTPMEEDE*
Ga0098049_108829313300010149MarineKSDWIKDEFYFIAHWRRYAIYKKYVYEDGDFDWNVEDMGESSPDRYCYKNGKIEEGWSTPMEEEE*
Ga0114934_1015842443300011013Deep SubsurfaceWIKDEYYFIVHWRRYASYTKEVYSDGQEEWCLEDMGESNPDRYQYKDGKIEGHWDTPMEEEE*
Ga0114934_1022489143300011013Deep SubsurfaceTDWIKDEYYFIVHWRRYASYTKEVYEDGDEEWCLEDMGESNPDRYQYKDGKIEGHWDTPMEDEE*
Ga0114934_1033415033300011013Deep SubsurfaceYYFIVHWRRYASYTKEVYKDGEEEWCLEDMGESNPDRYQYKDGKIEGHWDTPMEEDEYE*
Ga0160423_1023077443300012920Surface SeawaterLAFCEDKEWIKDEFYFIVHWRRYAVYKKEVYGDDGEFEWCLEDMGASSPDRYYYKDGKIEEGWSTPMEDDE*
Ga0160423_1076786723300012920Surface SeawaterHWRRYAIYNKEVYDGDESWCVEDMGESNPERYYYKDGKIGCDWTTPMEEEE*
Ga0163180_1074559633300012952SeawaterKDEFYFVVHWRRYAIYSKEEYDDEIYWNVEDMGESQPDRYYYKDGKIEYDWTTPMEEEE*
Ga0163180_1099419913300012952SeawaterKDEFYFIVHWRRYAIFNKEDTGNGEHYWCVEDMGESSPDRYCYKDGKIEGHWDTPMEEDE
Ga0163179_1184286313300012953SeawaterTDWIKDEYYFIVHWRRYASYTKEVYEDGQEEWCLEDMGESSPDRYQYKDGKIEGHWDTPMEDEE*
Ga0181417_107901213300017730SeawaterIYKKYVYEDGEFDWNVEDMGASSPDRYHYKDGKIHGEWSTPMEDEE
Ga0181420_121194333300017757SeawaterRYAIYNKHVYDDGDFEWCLEDMGESSPDRYHYKDGKIHGEWSTPMEDEE
Ga0181409_118158033300017758SeawaterIKDEFYFIVHWRRYAIYNKHVYDDGEFEWCLEDMGASSPDRYHYKDGKIHGEWSTPMEDE
Ga0181414_111688313300017759SeawaterWIKDEFYFIVHWRRYAIYTKEEYDDEIYWNVEDMGESQPDRYYYKDGKIEYDWTTPMEDE
Ga0181408_105812113300017760SeawaterEKTDWIKDEFYFVVHWRRYAIYSKEEYDDEIYWNVEDMGESQPDRYYYKDGKIEYDWTTPMEDEE
Ga0181385_110635743300017764SeawaterIKDEFYFIAHWRRYAIYKKEVYDDETYWNVEDMGESSPDRYCYKNGKIEEGWSTPMEDEE
Ga0181385_111696113300017764SeawaterAHWRRYAIFNKEEYGDGEYYWSLEDMGESSPDRYHYKDGKIHGEWSTPMEDEE
Ga0181406_104036213300017767SeawaterIKDEYYFIVHWRRYASYTKEVYEDGQEEWCLEDMGESNPDRYQYKDGKIEGHWDTPMEEE
Ga0187220_110019213300017768SeawaterNKNDWIKDEFYFIAHWRRYAIYKKEGEGDDAYWGLEDMGASSPDRYHYKDGKIQGEWSTPMEDEE
Ga0187220_111600323300017768SeawaterFYFIAHWRRYAIYKKEVYDDETYWNVEDMGESNPDRYCYKNGKIEEGWSTPMEDEE
Ga0187220_117147713300017768SeawaterKNDWIKDEFYFIAHWRRYAIYKKEVYDDSEEWCLEDMGASSPDRYHYKDGKIQGEWSTPMEDEE
Ga0211654_102397633300020247MarineYFIAHWRRYAVYKKEVYGDDGEFEWCLEDMGASSPDRYYYKDGKIEEGWSTPMEDDE
Ga0211627_103311213300020250MarineHWRRYASYTKEVYEDGQEEWCLEDMGESNPDRYCYKNGKIEGHWDTPMEEEE
Ga0211520_101467943300020294MarineWLLEFCEKTDWIKDEYYFIVHWRRYASYTKEVYKDGQEEWCLEDMGESSPDRYCYKDGKIEGHWDTPMEEDE
Ga0211520_101961543300020294MarineWLLEFCEKTDWIKDEYYFIVHWRRYASYTKEVYSDGQEEWCLEDMGESNPDRYQYKDGKIEGHWDTPMEEEE
Ga0211693_102455033300020308MarineWIKDEYYFIVHWRRYAIYTKEEYNDEIYWNVEDMGESQPDRYYYKDGKIEYDWTTPMEEDEYE
Ga0211542_109446123300020312MarineKDEFYFIAHWRRYAIYKKEVYGDDGEFEWCIEDMGASSPDRYHYKDGKIQGEWSTPMEED
Ga0211506_113486433300020365MarineIVHWRRYAVYKRYEYKDSEGNSEFEWGLEDMGESSPDRYYYKDGKILEDWSTQMEDEEEF
Ga0211652_1017160413300020379MarineLEFCEKNDWIKDEFYFIAHWRRYAIYNKEVYDGGESWCVEDMGESNPERYYYKNGKIECDWTTPMEDEE
Ga0211497_1013477913300020394MarineWIKDEFYFIVHWRRYAIYKKEVYDDETYWNVEDMGESQPDRYCYKNGKIEYDWTTPMEEE
Ga0211705_1022217923300020395MarineTSWIKDEFYFIVHWRRYAIYKKEVYDDSEEWCLEDMGASSPDRYFYKDGKIEEGWSTPMEDEE
Ga0211587_1001815713300020411MarineSWIKDEFYFIVHWRRYAIYNKEVYEDGDEEWCLEDMGESSPDRYHYINGKIEGHWDTPMEEEE
Ga0211587_1013727213300020411MarineYFIVHWRRYAIYEKYVYEDGDFDWNVEDMGESQPDRYCYKDGKIEYDWTTPMEEEE
Ga0211587_1017057943300020411MarineRYAIYNKEVYEDGDEEWCLEDMGESRPDRYYYKDGKIEYDWTTPMEDEE
Ga0211587_1019236113300020411MarineAIYNKEVYEDGDEEWCLEDMGESSPERYYYKDGKIEYDWTTPMEDEE
Ga0211512_1008300743300020419MarineCERTDWIKDEFYFIVHWRRYAIFTKEDTGNGEHYWCTEDMGESSPDRYYYKDGKIEGHWDTPMEEDE
Ga0211653_1032530323300020421MarineEFYFIAHWRRYAIYKKEVYDDETYWNVEDMGESSPDRYCYKNGKIEEGWSTPMEDEE
Ga0211653_1038599323300020421MarineEKTDWIKDEFYFIAHWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRYHYKDGKIQGEWSTPMEDEE
Ga0211521_1003174013300020428MarineKDEYYFIVHWRRYAIFTKEDTGNGEHYWCTEDMGESSPDRYHYKDGKIEGHWDTPMEEDE
Ga0211576_1001771113300020438MarineWRRYAIFNKEDYGNGEHYWCVEDMGESSPDRYHYKNGKIEGHWDTPMEDEE
Ga0211576_1042162433300020438MarineWRRYAIFNKEDYGNGEHYWCVEDMGESSPDRYHYKDGKIHGEWSTPMEDEE
Ga0211564_1014456543300020445MarineKNDWIKDEFYFIAHWRRYAIYKKYVYEDGEFDWNVEDMGESSPDRYCYKNGKIEEGWSTPMEDEE
Ga0211564_1019333813300020445MarineEWIKDEFYFIVHWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRYFYKDGKIEEGWSTPMEDDE
Ga0211694_1038640013300020464MarineEFCEKTDWIKDEYYFIVHWRRYAIYTKEEYNDEIYWNVEDMGESQPDRYYYKDGKIEYDWTTPMEEDEYE
Ga0211577_1012102413300020469MarineEFYFIVHWRRYAIYTKEEYDDEIYWNVEDMGESQPDRYYYKDGKIEYDWTTPMEDEE
Ga0211543_1001476113300020470MarineWIKDEFYFIVHWRRYAIYEKYVYEDGDFDWNVEDMGESQPDRYYYKDGKIEYDWTTPMEEDEYE
Ga0211543_1003335813300020470MarineRYAIYNKHVYDDGDFEWCLEDMGESWPERYYYKDGKIEADWTTPMEEDE
Ga0211543_1007606983300020470MarineWRRYAIYKKEEYDDETYWNVEDMGESQPDRYCYKDGKIEYDWTTPMEEEE
Ga0211614_1036334413300020471MarineFCEKNDWIKDEFYFIAHWRRYAIYKKEVYDDEVYWNVEDMGESSPDRYCYKNGKIEEGWSTPMEDEE
Ga0211579_1000942113300020472MarineKNDWIKDEFYFIVHWRRYAIYKKEVYDDSEEWCLEDMGASSPDRYHYKDGKIEGHWDTPMEEEE
Ga0211579_1040669833300020472MarineLEFCEKTDWIKDECYFIAHWRRYAIFNKEEYGDGEYYWSVEDMGESSPDRYHYKDGKIQGEWSTPMEDEE
Ga0211579_1063845613300020472MarineHWRRYAIYNKHVYDDGDFEWCLEDMGESSPDRYHYKDGKIHGEWSTPMEDEE
Ga0211579_1080221613300020472MarineKNDWIKDEFYFIVHWRRYAIYKKEVYDDSEEWCLEDMGASSPDRYHYKDGKIEGHWDTPMEDEE
Ga0211547_1017019843300020474MarineEFCEKTDWIKDEYYFIVHWRRYASYTKEVYEDGQEEWCLEDMGESSPDRYQYKDGKIEGHWDTPMEDEE
Ga0211503_1013331213300020478MarineDEFYFIVHWRRYAIYNKHVYDDGDFEWCLEDMGESSPERYYYKDGKIEEDWTTPMEEDE
Ga0209992_1000709913300024344Deep SubsurfaceWLLEFCEKTDWIKDEYYFIVHWRRYASYTKEVYKDGEEEWCLEDMGESNPDRYQYKDGKIEGHWDTPMEEDEYE
Ga0209992_1021746013300024344Deep SubsurfaceGDYYFIVHWRRYASYTKEVYSDGQEEWCLEDMGESNPDRYQYKDGKIEGHWDTPMEEDEY
Ga0208158_108263713300025110MarineYFIAHWRRYAIYKKYVYEDGEFDWNVEDMGESSPDRYCYKNGQIEEGWSTPMEDEE
Ga0209232_119762133300025132MarineYAIYKKEEYSDGEYEWCLEDMGESSPDRYCYKNGKIEGHWDTPMEEEE
Ga0208749_102983113300026077MarineIKDEFYFIAHWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRYHYKDGKIHGEWSTPMEDEE
Ga0208130_105148713300026258MarineIVHWRRYAIYNKEVYEDGDEEWCLEDMGESSPERYYYKDGKIEYDWTTPMEDEE
Ga0208277_104220733300026292MarineFYFIAHWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRYHYKDGKIQGEWSTPMEEEE
Ga0208277_126091313300026292MarineAHWRRYAIYKKEVYGDDGEFEWCLEDMGASSPDRYHYKDGKIHGEWSTPMEDDE
Ga0209404_10002115223300027906MarineYFIAQWRRYAIYKKYVYEDGEFDWNVEDMGASSPDRYHYKDGKIQGEWSTPMEDEE
Ga0209404_1104689833300027906MarineRYAIYKKEVYGDDGEFEWCLEDMGASSPDRYHYKDGKIQGEWSTPMEEDE
Ga0183757_100645883300029787MarineWIKDEYYFIVHWRRYASYTKEVYEDGEEEWCLEDMGESNPDRYQYKDGKIEGHWDTPMEDEE
Ga0183757_103851333300029787MarineIKDEYYFIVHWRRYASYTKEVYKDGQEEWCLEDMGESSPDRYCYKDGKIEGHWDTPMEED
Ga0315331_1008567313300031774SeawaterEFVNKNDWIKDEFYFIAHWRRYAIYKKYVYEDGEFDWNVEDMGESSPDRYHYKDGKIHGEWSTPMEDEE
Ga0315331_1062631723300031774SeawaterVNKNDWIKDEFYFIAHWRRYAIYKKEGEGDDAYWGLEDMGESSPDRYCYKNGQIEEGWSTPMEDEE
Ga0315331_1081843213300031774SeawaterAHWRRYAIYKKYVYDDGDFDWNVEDMGESSPDRYCYKNGKIEEGWSTPMEDEE
Ga0315326_1093837913300031775SeawaterCEKTDWIKDEFYFIAHWRRYAIFKKEVYDGDESWCVEDMGESNPDRYCYKNGKIEEGWSTPMEDEE
Ga0315327_1030805013300032032SeawaterIAHWRRYAIYKKYVYEDGDFDWNVEDMGESSPDRYCYKNGKIEEGWSTPMEDEE
Ga0315330_1032614913300032047SeawaterIAHWRRYAIYNKHVYDDGDFEWCLEDMGASSPDRYCYKNGKIEEGWSTPMEEEE
Ga0315315_1085443213300032073SeawaterAHWRRYAIYKKYVYEDGEFDWNVEDMGASSPDRYHYKDGKIHGEWSTPMEDEE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.