NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F103354

Metagenome / Metatranscriptome Family F103354

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103354
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 41 residues
Representative Sequence VNESKGFASKAAGVAPKKPIVESNDFVARMQKLAGII
Number of Associated Samples 96
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 97.03 %
% of genes from short scaffolds (< 2000 bps) 90.10 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (57.426 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(11.881 % of family members)
Environment Ontology (ENVO) Unclassified
(30.693 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(44.554 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.15%    β-sheet: 0.00%    Coil/Unstructured: 73.85%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF07068Gp23 25.74
PF02562PhoH 1.98
PF13692Glyco_trans_1_4 0.99
PF04984Phage_sheath_1 0.99
PF01391Collagen 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG1702Phosphate starvation-inducible protein PhoH, predicted ATPaseSignal transduction mechanisms [T] 1.98
COG1875Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domainsGeneral function prediction only [R] 1.98
COG3497Phage tail sheath protein FIMobilome: prophages, transposons [X] 0.99


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A57.43 %
All OrganismsrootAll Organisms42.57 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001346|JGI20151J14362_10015417All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4260Open in IMG/M
3300003684|Ga0005851_1032652Not Available1714Open in IMG/M
3300005527|Ga0068876_10304227All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17905Open in IMG/M
3300006357|Ga0075502_1158596All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17629Open in IMG/M
3300006390|Ga0075509_1525349All Organisms → Viruses → Predicted Viral1814Open in IMG/M
3300006400|Ga0075503_1086677All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17624Open in IMG/M
3300006425|Ga0075486_1048913Not Available1112Open in IMG/M
3300006802|Ga0070749_10176200Not Available1233Open in IMG/M
3300006919|Ga0070746_10262015All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17804Open in IMG/M
3300007304|Ga0102689_1791798Not Available1309Open in IMG/M
3300007538|Ga0099851_1093156Not Available1152Open in IMG/M
3300007559|Ga0102828_1141113Not Available601Open in IMG/M
3300007612|Ga0102801_1316849All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17536Open in IMG/M
3300007706|Ga0102899_1201962All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17503Open in IMG/M
3300007972|Ga0105745_1122755Not Available779Open in IMG/M
3300008107|Ga0114340_1015485Not Available3654Open in IMG/M
3300008107|Ga0114340_1065960Not Available1539Open in IMG/M
3300008113|Ga0114346_1161340All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17944Open in IMG/M
3300008116|Ga0114350_1061644Not Available1316Open in IMG/M
3300008258|Ga0114840_1021300Not Available1079Open in IMG/M
3300008266|Ga0114363_1000760Not Available34848Open in IMG/M
3300008267|Ga0114364_1030998Not Available2094Open in IMG/M
3300008450|Ga0114880_1000273Not Available32781Open in IMG/M
3300008450|Ga0114880_1205318All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17656Open in IMG/M
3300009051|Ga0102864_1126480Not Available698Open in IMG/M
3300009051|Ga0102864_1201726All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17543Open in IMG/M
3300009170|Ga0105096_10696654All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17538Open in IMG/M
3300009472|Ga0115554_1281485Not Available660Open in IMG/M
3300009908|Ga0132233_101510All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17721Open in IMG/M
3300010936|Ga0137784_1007789All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17790Open in IMG/M
3300011381|Ga0102688_1670346Not Available657Open in IMG/M
3300012516|Ga0129325_1008786All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17786Open in IMG/M
3300012702|Ga0157596_1184875Not Available620Open in IMG/M
3300012706|Ga0157627_1208927All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B171023Open in IMG/M
3300012707|Ga0157623_1068351All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17587Open in IMG/M
3300012709|Ga0157608_1114696Not Available504Open in IMG/M
3300012719|Ga0157600_1194917Not Available1449Open in IMG/M
3300012730|Ga0157602_1204003Not Available1826Open in IMG/M
3300012757|Ga0157628_1027350Not Available505Open in IMG/M
3300013295|Ga0170791_13669032Not Available515Open in IMG/M
3300016697|Ga0180057_1050540All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17926Open in IMG/M
3300016723|Ga0182085_1269713Not Available1123Open in IMG/M
3300016723|Ga0182085_1387475Not Available1238Open in IMG/M
3300016724|Ga0182048_1149949Not Available1135Open in IMG/M
3300016737|Ga0182047_1118476All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17731Open in IMG/M
3300016739|Ga0182076_1327665All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17873Open in IMG/M
3300016748|Ga0182043_1460235All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17715Open in IMG/M
3300016751|Ga0182062_1237168All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17630Open in IMG/M
3300017704|Ga0181371_1037820All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17790Open in IMG/M
3300017716|Ga0181350_1135680Not Available582Open in IMG/M
3300017763|Ga0181410_1153656All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17646Open in IMG/M
3300017772|Ga0181430_1023553Not Available2010Open in IMG/M
3300017774|Ga0181358_1279053Not Available516Open in IMG/M
3300017777|Ga0181357_1196155Not Available723Open in IMG/M
3300017778|Ga0181349_1208274Not Available672Open in IMG/M
3300017784|Ga0181348_1017734Not Available3049Open in IMG/M
3300017786|Ga0181424_10004152Not Available6347Open in IMG/M
3300017786|Ga0181424_10121895Not Available1123Open in IMG/M
3300018041|Ga0181601_10588540All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17571Open in IMG/M
3300019266|Ga0182061_1057845All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17705Open in IMG/M
3300019276|Ga0182067_1191397All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17518Open in IMG/M
3300019784|Ga0181359_1077072Not Available1255Open in IMG/M
3300020160|Ga0211733_11074071All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17532Open in IMG/M
3300020165|Ga0206125_10356845All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17538Open in IMG/M
3300020172|Ga0211729_11442646Not Available1187Open in IMG/M
3300020190|Ga0194118_10393329Not Available704Open in IMG/M
3300020222|Ga0194125_10751015All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17562Open in IMG/M
3300020439|Ga0211558_10534329All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17532Open in IMG/M
3300020506|Ga0208091_1025823Not Available670Open in IMG/M
3300021959|Ga0222716_10529168All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17657Open in IMG/M
3300022200|Ga0196901_1095589Not Available1042Open in IMG/M
3300023236|Ga0222659_1012514Not Available1455Open in IMG/M
3300023709|Ga0232122_1068563All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17858Open in IMG/M
3300024346|Ga0244775_11132824Not Available612Open in IMG/M
3300024480|Ga0255223_1010676Not Available1420Open in IMG/M
3300024531|Ga0255228_1008315Not Available1834Open in IMG/M
3300024533|Ga0256299_1015101Not Available1430Open in IMG/M
3300024568|Ga0255238_1055165All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17968Open in IMG/M
3300024569|Ga0255243_1080866Not Available808Open in IMG/M
3300024856|Ga0256304_1044901All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17921Open in IMG/M
3300024866|Ga0255272_1167174Not Available545Open in IMG/M
3300025543|Ga0208303_1107543All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17580Open in IMG/M
3300025641|Ga0209833_1150800All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17610Open in IMG/M
3300025652|Ga0208134_1126495All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17672Open in IMG/M
3300026231|Ga0209546_1006141All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17608Open in IMG/M
3300026425|Ga0256300_1034202Not Available716Open in IMG/M
3300027772|Ga0209768_10432711Not Available514Open in IMG/M
3300028085|Ga0255255_1078230All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17565Open in IMG/M
3300028194|Ga0257106_1269643All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17565Open in IMG/M
3300031758|Ga0315907_11142860Not Available550Open in IMG/M
3300031787|Ga0315900_10322340Not Available1266Open in IMG/M
3300031857|Ga0315909_10829935Not Available580Open in IMG/M
3300031951|Ga0315904_11250908All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17565Open in IMG/M
3300032093|Ga0315902_10308300Not Available1492Open in IMG/M
3300032116|Ga0315903_11187098Not Available516Open in IMG/M
3300033816|Ga0334980_0122769Not Available1073Open in IMG/M
3300034061|Ga0334987_0043834Not Available3775Open in IMG/M
3300034066|Ga0335019_0628686All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium B17625Open in IMG/M
3300034105|Ga0335035_0734247Not Available502Open in IMG/M
3300034418|Ga0348337_069285Not Available1291Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater11.88%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous11.88%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh10.89%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake9.90%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater8.91%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton6.93%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater5.94%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake4.95%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine3.96%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.96%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.97%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.98%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.98%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.99%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.99%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment0.99%
Meromictic PondEnvironmental → Aquatic → Freshwater → Pond → Unclassified → Meromictic Pond0.99%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.99%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.99%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.99%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.99%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.99%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.99%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.99%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.99%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water0.99%
Upper TroposphereEnvironmental → Air → Outdoor Air → Unclassified → Unclassified → Upper Troposphere0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001346Pelagic Microbial community sample from North Sea - COGITO 998_met_01EnvironmentalOpen in IMG/M
3300003684Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA - 2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300006357Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006390Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006400Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006425Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007304Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007559Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541EnvironmentalOpen in IMG/M
3300007612Marine microbial communities from the Southern Atlantic ocean - KN S19 DCM_A metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007706Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3EnvironmentalOpen in IMG/M
3300007972Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0umEnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008258Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009051Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02EnvironmentalOpen in IMG/M
3300009170Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009472Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404EnvironmentalOpen in IMG/M
3300009908Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 6, Depth 6m; RNA IDBA-UDEnvironmentalOpen in IMG/M
3300010936Marine microbial communities from surface seawater of North Pacific Subtropical Gyre ? Stn. ALOHA, 15mEnvironmentalOpen in IMG/M
3300011381Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel7S_1600h metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300012516Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012702Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES114 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012706Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES159 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012707Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES154 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012709Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES134 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012719Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES123 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012730Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES126 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012757Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES161 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013295northern Canada Lakes metatranscriptome co-assemblyEnvironmentalOpen in IMG/M
3300016697Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES156 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016723Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041405ZT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016724Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011507AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016737Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011506CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016739Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071408BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016748Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011502CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016751Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101408BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017704Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaGEnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019266Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101407AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019276Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101413AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020190Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surfaceEnvironmentalOpen in IMG/M
3300020222Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250mEnvironmentalOpen in IMG/M
3300020439Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)EnvironmentalOpen in IMG/M
3300020506Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300023236Saline water microbial communities from Ace Lake, Antarctica - #547EnvironmentalOpen in IMG/M
3300023709Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300024480Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_0h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024531Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024533Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepC_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024568Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepA_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024569Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepB_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024856Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024866Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025641Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300026231Upper troposphere microbial communities from California, USA - DAQCA-005 (SPAdes)EnvironmentalOpen in IMG/M
3300026425Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027772Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)EnvironmentalOpen in IMG/M
3300028085Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028194Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10mEnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300033816Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034105Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20151J14362_1001541713300001346Pelagic MarineTKKPVNESKGFASKAAGVAPKAPIVESDNFVARMQKLAGII*
Ga0005851_103265213300003684Freshwater And SedimentETKTKTTIKESVGFASKAVGVAPAQPIVEGDAAIRRMQQLAGIVK*
Ga0068876_1030422713300005527Freshwater LakeVGFASKAVGVAPSQPIVESDAAIRRMQQLAGIIK*
Ga0075502_115859623300006357AqueousETKKAMNESKGFASKAAGVAPQKPIVENNDFVARMQKLAGII*
Ga0075509_152534923300006390AqueousIKDAVTTETKKPVNESRSFASKAAGVAPQKPIVESNDFVARMQKLAGII*
Ga0075503_108667723300006400AqueousKKPVNESRSFASKAAGVAPKKPIVESNDFVARMQKLAGII*
Ga0075486_104891323300006425AqueousESKGFASKAAGVAPKAPIVESDNFVARMQKLAGII*
Ga0070749_1017620013300006802AqueousTKKSSIKESVGFASKAMGVAPAKPIVNEDVQITRMKKLAGIIK*
Ga0070746_1026201513300006919AqueousKSVNESKGFASKAAGVAPKAPIVESDNFVARMQKLAGII*
Ga0102689_179179813300007304Freshwater LakeESLGFASKASGVAPKSQIVESNDVITRMQKLANIIK*
Ga0099851_109315613300007538AqueousPVNESRSFASKAAGVAPKKPIVESNDFVARMHKLAGII*
Ga0102828_114111313300007559EstuarineKESLGFASKAAGMAPRKLIVENNEWITRMQKLANINQTN*
Ga0102801_131684923300007612MarineETKKQVNESRSFASKPTGNAPKKPIVESNDFVSRMQKLAGII*
Ga0102899_120196223300007706EstuarineKESVGFASKAAGVAPKQPIVESDAAIRRMQQLAGIIK*
Ga0105745_112275513300007972Estuary WaterKSQFKESLGFASKAAGVAPKNSANSIVESNDVIARMQ*
Ga0114340_101548543300008107Freshwater, PlanktonSLGFASKAAGVAPQKQIVEVNETVSRWQMLAGINKF*
Ga0114340_106596023300008107Freshwater, PlanktonSTIKESLGFASKAAGVAPQKQIVEVNETVSRWQMLAGIK*
Ga0114346_116134023300008113Freshwater, PlanktonNTKTKSTIKESVGFASKAAGVAPKQPIVEGDAAIRRMQQLAGIIK*
Ga0114350_106164423300008116Freshwater, PlanktonKSTIKESLGFASKADGNAPQKQIVEVNETVSRWQMLAGIK*
Ga0114840_102130023300008258Freshwater, PlanktonGFASKAAGMAPQKQIVEVNETVSRWQMLAGINKF*
Ga0114363_100076013300008266Freshwater, PlanktonSTIKESLGFASKAAGVAPKKQIVEVNDTVARWQMLAGINKF*
Ga0114364_103099833300008267Freshwater, PlanktonKKSTIKESLGFASKAAGVAPKKQIVQVDETMSRWQMLAGITKY*
Ga0114876_116779613300008448Freshwater LakeLSESISTKAKNTFKESVGFASKAAGVAPAQPIVESDAAIRRMQQLAGIIK*
Ga0114880_100027313300008450Freshwater LakeKSKKSTIKESLGFASKAAGVAPKKQIVEVNDTVARWQMLAGINKF*
Ga0114880_120531813300008450Freshwater LakeTKTKNTIKESVGFASKAAGIAPAQPIVESDAAIRRMQQLAGIIK*
Ga0102864_112648013300009051EstuarineESLGFASKAAGIAPSKVIVESNDAIARMQKLANIIK*
Ga0102864_120172633300009051EstuarineSIKESIGFASKAAGVAPKQPIVESDAAIRRMQQLAGIIK*
Ga0105096_1069665413300009170Freshwater SedimentTKSTIKESVGFASKAAGVAPKQPIVEGDAAIRRMQQLAGIIK*
Ga0115554_128148523300009472Pelagic MarineMNESKGFASKAAGVAPKKPIVESNDFVARMQKLAGII*
Ga0132233_10151013300009908Meromictic PondGAKKAVNESRSFASKAAGVAPKTQIVESNDFVKRMQKIAGII*
Ga0137784_100778913300010936MarineDAVTTETKKTVNESRSFASKPTGNAPKKPIVESNDFVSRMQKLAGII*
Ga0102688_167034613300011381Freshwater LakeAAPAKKAIKESLGFASKAVGVAPNKTIVESNDVIARMQKLANIIK*
Ga0129325_100878623300012516AqueousDAVTTETKKPVNESRSFASKAAGVAPKKPIVENNDFVARMQKLAGII*
Ga0157596_118487523300012702FreshwaterAAPKKAIKESLGFASKAAGVAPNKTIVESNDVISRMQKLANIIK*
Ga0157627_120892723300012706FreshwaterSIKESVGFASKAVGVAPSQPIVESDAAIRRMQQLAGIIK*
Ga0157623_106835123300012707FreshwaterLNSKTVKSSIKESVGFASKAVGVAPSQPIVESDAAIRRMQQLAGIIK*
Ga0157608_111469623300012709FreshwaterEIVKESLGFASKAAGVAPKKAIVESDDVITRMQKLANIIK*
Ga0157600_119491713300012719FreshwaterKSQIKESLGFASKAAGVAPKSTIVESNDVIARMQKLANIIK*
Ga0157602_120400313300012730FreshwaterIKESVGFASKAVGVAPSQPIVESDAAIRRMQQLAGIIK*
Ga0157628_102735013300012757FreshwaterSIGFASKAAGVAPKSTIVESNDVIARMQKLANIRL*
Ga0170791_1366903213300013295FreshwaterIKESLGFASKAAGNAPQKQIVEVNETVSRWQMLAGIK*
Ga0180057_105054023300016697FreshwaterSIKESIGFASKAAGVAPKQPIVEGDSAIRRMQQLAGIIK
Ga0182085_126971313300016723Salt MarshVTTEAKKPVNESRSFASKAAGVAPQKPIVENNYFVARMQKLAGII
Ga0182085_138747513300016723Salt MarshEAKKPVNESRSFASKAAGVAPQKPIVENNDFVARMQKLAGII
Ga0182048_114994923300016724Salt MarshKKPVNESRSFASKAAGVAPKTQIVESNDFVARMQKIAGII
Ga0182047_111847623300016737Salt MarshLKENLNGKKANLKEHKSFASKAAGVAPKQEVITEGADFVSRMQKLAGII
Ga0182076_132766513300016739Salt MarshETKKPVNESRSFASKAAGVAPKKPIVESNDFVARMQKLAGII
Ga0182043_146023513300016748Salt MarshESRSFASKAAGVAPQKPIVENNDFVARMQKLAGII
Ga0182062_123716823300016751Salt MarshLTETKKSSIKESVGFASKAMGVAPAKPIVNEDVQITRMKKLAGIIK
Ga0181371_103782013300017704MarineRGFASKAAGVAPKAKQPIVEGDNFVSRMQKLAGIIN
Ga0181350_113568013300017716Freshwater LakeSGKSQIKESLGFASKAAGMAPKNQIVEVNDTLSRMQQLAGIIKY
Ga0181410_115365613300017763SeawaterHKSFASKAAGVAPKKDILTEGDNFVNRMQKLAGII
Ga0181430_102355333300017772SeawaterNESKGFASKAAGVAPKAPIVESDNFVARMQKLAGII
Ga0181358_127905313300017774Freshwater LakeGAKREIVKESLGFASKAAGVAPKKAIVESDDVITRMQKLANIIK
Ga0181357_119615513300017777Freshwater LakeEKRQIRESLGFASKSTGIVAKPTIVESNDFVARMQKLANIK
Ga0181349_120827413300017778Freshwater LakeAKSKKSTIKESLGFASKAAGVAPKKQIVQVDETMSRWQMLAGITKY
Ga0181348_101773413300017784Freshwater LakeESIGFASKAAGVAPKQPIVESDAAIRRMQQLAGIIK
Ga0181424_1000415213300017786SeawaterVNESKGFASKAAGVAPKKPIVESNDFVARMQKLAGII
Ga0181424_1012189523300017786SeawaterVTTKKSVNESKGFASKAAGVAPKAPIVESDNFVARMQKLAGII
Ga0181601_1058854013300018041Salt MarshTKKSSIKESVGFASKAMGVAPAKPIVNEDVQITRMKKLAGIIK
Ga0182061_105784513300019266Salt MarshNESKGFASKAAGVAPKTPIVESDNFVARMQKLAGII
Ga0182067_119139723300019276Salt MarshAVTTETKKAMNESKGFASKAAGVAPKKPIVESNDFVARMQKLAGII
Ga0181359_107707213300019784Freshwater LakeKSAIKESLSFASKAAGVADRKPIVENNDFVARMQKLAGII
Ga0211733_1107407123300020160FreshwaterSVAPAKNSIKESLSYASKAAGVADRKPIVENNDFVARMQKLAGII
Ga0206125_1035684523300020165SeawaterIKDTTTKAKTAVNESRSFASKAAGVAETKQPIVESNDFVARMQKLAGII
Ga0211729_1144264613300020172FreshwaterESFGFASKATGVAQNRTIVESNDVITRMQKLANIIK
Ga0194118_1039332923300020190Freshwater LakeESLGFASKAAGVAPKKPIVEVDATMSRWQMLAGITKF
Ga0194125_1075101513300020222Freshwater LakeESLTTKTKSTIKESVGFASKAAGVAPAQPIVESDAAIRRMQQLAGIIK
Ga0211558_1053432913300020439MarineNESKGFASKAAGVAPKQPIVESNNFVARMQKLAGII
Ga0208091_102582323300020506FreshwaterTIKESLGFASKAAGNAPQKQIVQVDETVSRWQMLAGIK
Ga0222716_1052916823300021959Estuarine WaterTLKDALTETKKSSIKESVGFASKAMGVAPAKPIVNEDVQITRMKKLAGIIK
Ga0196901_109558913300022200AqueousAVTMEAKKPVNESRSFASKAAGVAPKTQIVESNDFVARMQKIAGII
Ga0222659_101251413300023236Saline WaterSRSFASKAVGVAPKTQIVEGNDFVARMQKLAGINKF
Ga0232122_106856323300023709Salt MarshTTKKPVNESKGFASKAAGVAPKTPIVESDNFVARMQKLAGII
Ga0244775_1113282423300024346EstuarineTATSGNKTQIKESLGFASKAAGVAPKKQIVEVNDNISRMQMLAGIK
Ga0255223_101067613300024480FreshwaterETKKQNIKESVGFASKAAGVAPAQPIVEGDAAIRRMQQLAGIIK
Ga0255228_100831513300024531FreshwaterKESVGFASKPMGVAPAKTIVNEDVQVTRMKKLAGIIK
Ga0256299_101510113300024533FreshwaterSVGFASKAAGVAPAQPIVEGDAAIRRMQQLAGIIK
Ga0255238_105516513300024568FreshwaterIKESIGFASKAAGVAPKQPIVESDAAIRRMQQLAGIIK
Ga0255243_108086623300024569FreshwaterKFLRLFASKATGIAPKKQMIVESNDFIARMQKLANITK
Ga0256304_104490123300024856FreshwaterSTKKSSIKESIGFASKAAGVAPKQPIVESDAAIRRMQQLAGIIK
Ga0255272_116717413300024866FreshwaterTIKESLGFASKAAGVAPQKQIVEVNETVSRWQMLAGIK
Ga0208303_110754323300025543AqueousKKSVNESKGFASKAAGVAPKAPIVESDNFVARMQKLAGII
Ga0209833_115080023300025641Pelagic MarineDSVTTGAKKAVNESRSFASKAAGVAPKTQIVESNDFVKRMQKIAGII
Ga0208134_112649513300025652AqueousESKGFASKAAGVAPKQVLVEENNFVARMQKLAGII
Ga0209546_100614113300026231Upper TroposphereKESLSFASKPAGMAPNRQPIVENDDFVKRMQKIAGII
Ga0256300_103420213300026425FreshwaterIKESLGFASKAAGVAPKNSANSIVESNDVIARMQKLANIIK
Ga0209768_1043271113300027772Freshwater LakeESLGFASKAAGVAPKNSANSIVESNDVIARMQKLANIIK
Ga0255255_107823013300028085FreshwaterNTKVTKSSIKESVGFASKAVGVAPSQPIVESDAAIRRMQQLAGIIK
Ga0257106_126964313300028194MarineTKSPIKENLGSASKAAGVAQHRKPIVEIDSQVSRWQKLAGIK
Ga0315907_1114286013300031758FreshwaterKKAIKESLGFASKAAGVAPNKSIVESNDVISRMQKLANIK
Ga0315900_1032234013300031787FreshwaterLGFASKAAGIAPKKPIVEVDATVSRWQMLAGINKF
Ga0315909_1082993523300031857FreshwaterIVKESLGFASKAAGMAPQKPIVEVDDTVSRWKMLAGITKF
Ga0315904_1125090823300031951FreshwaterEALNTKTKSTIKESVGFASKAAGVAPKQPIVEGDSAIRRMQQLAGIIK
Ga0315902_1030830023300032093FreshwaterESLGFASKAAGVAPQKQIVEVNETVSRWQMLAGIK
Ga0315903_1118709823300032116FreshwaterSAKKTQIKESIGFASKAAGVAPKQQIIESNDVISRMQRLANIK
Ga0334980_0122769_1_1323300033816FreshwaterKSTKNTIKESLGFASKAAGMAPQKQIVEVNETVSRWQMLAGIK
Ga0334987_0043834_3667_37743300034061FreshwaterSIGFASKAAGVAPKQPIVEGDSAIRRMQQLAGIIK
Ga0335019_0628686_504_6233300034066FreshwaterTALKESIGFASKAAGVAPKGNTVEADPFITRMQKLAGII
Ga0335035_0734247_1_1143300034105FreshwaterKESFGFASKATGVAQNRTIVESNDVITRMQKLANIIK
Ga0348337_069285_1166_12913300034418AqueousTKKPVNESRSFASKAAGVAPKKPIVESNDFVARMQKLAGII


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