Metagenome Family F103334

Basic Information
Family ID	F103334
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	81 residues
Representative Sequence	MSASRPAPAKPSGVLRPWQRRLYRILLIPLGLIAANAIYLAAFTRDTAFFYAMLLLHLALGIAIAIPFFVFAITHAKRM
Number of Associated Samples	93
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.00 %
% of genes near scaffold ends (potentially truncated)	96.04 %
% of genes from short scaffolds (< 2000 bps)	89.11 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Bacteria (83.168 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.881 % of family members)
Environment Ontology (ENVO)	Unclassified (33.663 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.455 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.01% β-sheet: 0.00% Coil/Unstructured: 42.99%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01483	P_proprotein	14.85
PF00275	EPSP_synthase	5.94
PF12850	Metallophos_2	3.96
PF13517	FG-GAP_3	0.99
PF13435	Cytochrome_C554	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG4935	Regulatory P domain of the subtilisin-like proprotein convertases and other proteases	Posttranslational modification, protein turnover, chaperones [O]	14.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.16 %
Unclassified	root	N/A	15.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.16 %
Unclassified	root	N/A	15.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.17 %
Unclassified	root	N/A	15.84 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	67.33 %
Unclassified	root	N/A	15.84 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.99 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	67.33 %
Unclassified	root	N/A	15.84 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	67.33 %
Unclassified	root	N/A	15.84 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.99 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	67.33 %
Unclassified	root	N/A	15.84 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.99 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	67.33 %
Unclassified	root	N/A	15.84 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.99 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	67.33 %
Unclassified	root	N/A	15.84 %
Rhodopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula	0.99 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10122031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1393	Open in IMG/M
3300004156\|Ga0062589_102386907	Not Available	545	Open in IMG/M
3300004479\|Ga0062595_101561295	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300004479\|Ga0062595_101706902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300005332\|Ga0066388_104527400	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300005332\|Ga0066388_108531139	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula	510	Open in IMG/M
3300005335\|Ga0070666_10672574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300005347\|Ga0070668_101251439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300005354\|Ga0070675_100012157	All Organisms → cellular organisms → Bacteria	6748	Open in IMG/M
3300005367\|Ga0070667_100962632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300005439\|Ga0070711_101539067	Not Available	581	Open in IMG/M
3300005444\|Ga0070694_100059859	All Organisms → cellular organisms → Bacteria	2596	Open in IMG/M
3300005445\|Ga0070708_100341696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1411	Open in IMG/M
3300005445\|Ga0070708_100745783	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300005468\|Ga0070707_100730931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300005518\|Ga0070699_100315615	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300005518\|Ga0070699_100456326	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300005544\|Ga0070686_101710993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300005545\|Ga0070695_100632632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300005547\|Ga0070693_100133215	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300005563\|Ga0068855_101478410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300005616\|Ga0068852_102444297	Not Available	543	Open in IMG/M
3300005764\|Ga0066903_101590153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1239	Open in IMG/M
3300005836\|Ga0074470_10443219	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300005841\|Ga0068863_100191472	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300005894\|Ga0075270_1001581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2364	Open in IMG/M
3300005938\|Ga0066795_10240038	Not Available	537	Open in IMG/M
3300005947\|Ga0066794_10050975	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300006031\|Ga0066651_10674009	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300006358\|Ga0068871_101817878	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300006796\|Ga0066665_11346805	Not Available	550	Open in IMG/M
3300006852\|Ga0075433_10545774	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300006903\|Ga0075426_10311047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300006903\|Ga0075426_11061199	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300006904\|Ga0075424_102136218	Not Available	590	Open in IMG/M
3300009101\|Ga0105247_11255598	Not Available	593	Open in IMG/M
3300009148\|Ga0105243_13069995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300009156\|Ga0111538_13335748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300009174\|Ga0105241_11219878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300009792\|Ga0126374_10950914	Not Available	670	Open in IMG/M
3300010359\|Ga0126376_11697774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300010360\|Ga0126372_12864337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300010362\|Ga0126377_10252531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1717	Open in IMG/M
3300010366\|Ga0126379_12211901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300010373\|Ga0134128_11478802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300010375\|Ga0105239_13117210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300011270\|Ga0137391_10790388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300011271\|Ga0137393_11019612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300012189\|Ga0137388_11314362	Not Available	662	Open in IMG/M
3300012204\|Ga0137374_11263527	Not Available	512	Open in IMG/M
3300012206\|Ga0137380_10706506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300012350\|Ga0137372_10687911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300012353\|Ga0137367_10460967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300012355\|Ga0137369_10117094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2161	Open in IMG/M
3300012358\|Ga0137368_10885547	Not Available	545	Open in IMG/M
3300012360\|Ga0137375_11255477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300012532\|Ga0137373_11069615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300012948\|Ga0126375_11936629	Not Available	519	Open in IMG/M
3300012989\|Ga0164305_10486876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300014157\|Ga0134078_10502826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300014325\|Ga0163163_10203704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2027	Open in IMG/M
3300014969\|Ga0157376_10951826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300015372\|Ga0132256_102930473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300015372\|Ga0132256_103253610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300016270\|Ga0182036_11066072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300017959\|Ga0187779_11202435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300017966\|Ga0187776_11605445	Not Available	503	Open in IMG/M
3300017974\|Ga0187777_10080448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2123	Open in IMG/M
3300018000\|Ga0184604_10212628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300018058\|Ga0187766_10376311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300018061\|Ga0184619_10391597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300018076\|Ga0184609_10452374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300021080\|Ga0210382_10483648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300025918\|Ga0207662_10715451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300025922\|Ga0207646_10024505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5527	Open in IMG/M
3300025923\|Ga0207681_11475170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300025926\|Ga0207659_10101762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2167	Open in IMG/M
3300025930\|Ga0207701_11248797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300025940\|Ga0207691_10901409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300025945\|Ga0207679_11465645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300026095\|Ga0207676_10350998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1364	Open in IMG/M
3300026223\|Ga0209840_1040287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300027526\|Ga0209968_1050116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300027695\|Ga0209966_1116399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300028381\|Ga0268264_10104404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2470	Open in IMG/M
3300028381\|Ga0268264_10837931	Not Available	920	Open in IMG/M
3300030619\|Ga0268386_10074792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2646	Open in IMG/M
3300031712\|Ga0265342_10187746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1129	Open in IMG/M
3300031771\|Ga0318546_11166346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300031793\|Ga0318548_10619925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300031795\|Ga0318557_10517418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300032044\|Ga0318558_10669051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300032174\|Ga0307470_11521932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300032180\|Ga0307471_101984495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300032261\|Ga0306920_103085043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300033433\|Ga0326726_10646134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300033433\|Ga0326726_11542006	Not Available	647	Open in IMG/M
3300033550\|Ga0247829_11591032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300033815\|Ga0364946_091094	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	670	Open in IMG/M
3300034817\|Ga0373948_0099854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.32%
Host-Associated	Host-Associated	31.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.37%
Plants	Host-Associated → Plants	31.68%
Aquatic	Environmental → Aquatic	4.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.92%
Sediment	Environmental → Aquatic → Sediment	3.96%
Peat	Environmental → Terrestrial → Peat	1.98%
Roots	Host-Associated → Plants → Roots	1.98%
Freshwater	Environmental → Aquatic → Freshwater	0.99%
Floodplain	Environmental → Terrestrial → Floodplain	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.63%
Loam	Environmental → Terrestrial → Soil → Loam	15.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.99%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.98%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.99%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.99%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005894	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_203	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026223	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033815	Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_101220311	3300001661	Forest Soil	MREAAPAAKPSGVLRPWQRRLYRLLLIPLGLIAANSIYLFAFTRDTSFFYAMLLLHLALGIAIAIPFFVFAVTHARRM
Ga0062589_1023869072	3300004156	Soil	MAAPSSPTPKPAGVLRPWQRRLYRILLIPLGVMAANAIFLVAFTRDTAFFYAMLLTHLVLGVAIAIPFFVFAVTHAKRMIRMWNKR
Ga0062595_1015612951	3300004479	Soil	MAASSASPSKPAGVLRPWQRRLYRLLLIPLGLIAANAIYLFAFTRDTSFFYVMLLLHLTLGVLIAIPFFVFAVTHAKRMIRMWNKRAKIAGLGIFSL
Ga0062595_1017069021	3300004479	Soil	MVEATQTRRPSGVLAPWQRRLYRILLIPLGLIAANSIYLAAFTRDTAFFYAMLLLHLTLGLLIAIPFFVFAATHAKRMIRMWNKRAKYAGLAIFSLAIVCVS
Ga0066388_1045274001	3300005332	Tropical Forest Soil	MSGARPESTRPAGVLRPWQRRLYRILLVPLGLIAANSIYLAAFTRDTSFFYAMLLLHLTLGLLIAIPFFVFALTHARRMI
Ga0066388_1085311391	3300005332	Tropical Forest Soil	LYRILLIPLGLIAANAIYLFAFTRDTSFFYVMLLLHLALGILVAIPFFAFAVTHARRMIR
Ga0070666_106725741	3300005335	Switchgrass Rhizosphere	MSPDPTRPSGVLKPWQRRLYGLLLIPLGLIAANSIFIAAFTRDTAFFYAMLLLHLTLGLLIAVPFFVFAVTHAKRMIRMWNKRAKYAGLAIFTLAIVCVSTG
Ga0070668_1012514391	3300005347	Switchgrass Rhizosphere	MSPDPTRPSGVLKPWQRRLYGLLLIPLGLIAANSIFIAAFTRDTAFFYAMLLLHLTLGLLIAVPFFVFAVTHAKRMIRMWNKRAKYAGLAIFTLAIVC
Ga0070675_1000121571	3300005354	Miscanthus Rhizosphere	MSPDPTRPSGVLKPWQRRLYGLLLIPLGLIAANSIFIAAFTRDTAFFYAMLLLHLTLGLLIAVPFFVFAVTHAKRMI
Ga0070667_1009626321	3300005367	Switchgrass Rhizosphere	MSPDPTRPSGVLKPWQRRLYGLLLIPLGLIAANSIFIAAFTRDTAFFYAMLLLHLTLGLLIAVPFFVFAVTHAKRMIRMWNKRAKYAGL
Ga0070711_1015390671	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSGAPSNPSPKGVLLPWQRRLYRILLVPLGLMAADSIYLLSFTKYSSFFMAMLLLHLALGLLLSIPFFAFALTHAK
Ga0070694_1000598593	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MAAPSTPIPKPAGVLRPWQRRLYRILLIPLGVMAANAIFLVAFTRDTAFFYAMLLTHLALGIAIAIPFFVFAITHAKRMIRMWNKRAKIAGLAIFTL
Ga0070708_1003416961	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTSSGSPSKPSGVLRPWQRRLYRILLVPLGLIAANAIYLAAFTRDTAFFYAMLLLHLALGIAIAIPFFVFAITHAKKM
Ga0070708_1007457832	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MREAPASVSKTAGVLRPWQRRLYRLLLIPLGLIAANAIYLYSFTRDTAFFYSMLFLHLTLGVLIAIPFFAFALTHAKRMIHMWNKRAKIAG
Ga0070707_1007309311	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPGKPPGVLQPWQRRLYRILLIPLGLIAANSIYIAAFTRDTSFFYVMLLLHLTLGVLIAVPFFVFALTHAKRMIRMW
Ga0070699_1003156151	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VESSAQTKPSGVLRPWQRRLYRLLLIPLGLIAANAIYLFAFTRDTSFFYVMLLLHLALGILVAIPF
Ga0070699_1004563263	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSEVPGKPVPKGVLLPWQRRLYRILLIPLGLMAADSIYLLSFTKYSPFFMAMLLLHLGLGLLLAIPFFAFAVTHAKKMIRMRNLRAKYAGLA
Ga0070686_1017109932	3300005544	Switchgrass Rhizosphere	MVGGTPSGRTAGVLAPWQRRLYRILLVPLGLIAANSIYLAAFTRDTAFFYAMLLLHLTLGLLIAIPFFVFAATHAKRMIRMWNKRAKYAGLAIFTLAIVCVSTG
Ga0070695_1006326322	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSPDPTRPSGVLKPWQRRLYGLLLIPLGLIAANSIFIAAFTRDTAFFYAMLLLHLTLGVLIAIPFFIFAVTHAKRMIRMWNKRAKYAGLAIFTLAIVCVSTG
Ga0070693_1001332151	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MVGGTPSGRTAGVLAPWQRRLYRILLVPLGLIAANSIYLAAFTRDTAFFYAMLLLHLTLGLLIAIPFFVFAATHAKRMIRMWNKRAKYA
Ga0068855_1014784102	3300005563	Corn Rhizosphere	MAAPPTPTPKPAGVLRPWQRRLYRILLIPLGVMAANAIFLVAFTRDTAFFYAMLLTHLALGIAIAIPFFVF
Ga0068852_1024442971	3300005616	Corn Rhizosphere	MPGAPKSPAPKGVLLPWQRRLYRILLIPLGLMAADSIYLISFTKYSSFFMAMLLLHLALGLLLAIPFFTFAATHAKKMIRMRNLRAKYAGL
Ga0066903_1015901531	3300005764	Tropical Forest Soil	MAEMATSAKPSGVLKPWQRRLYRLLLIPLGLIAANAIYLFAFTRDTSFFYAMLLLHLALGIAIAVPFFVFAVSHAKRMIRMWNKR
Ga0074470_104432191	3300005836	Sediment (Intertidal)	MIPDAPAPARPSGVLRPWQRRLYSLLLVPLGLIAANSIFIAAFTRDTAFFYAMLLAHLTLGVLIAVPFFVFAVTHARRMIRTWNRRARAA
Ga0068863_1001914721	3300005841	Switchgrass Rhizosphere	MSAKDLPPARPAGVLQPWQRRLYRLLLIPLGLIAANSIYISAFTRDTSFFYAMLLLHLALGILI
Ga0075270_10015813	3300005894	Rice Paddy Soil	MSGVPSPPSPKGVLLPWQRRLYRILLIPLGLMAADSIYLLSFTKYSSFFMAMLLLHLALGLLLAIPFFAF
Ga0066795_102400382	3300005938	Soil	MPDTAPKPRPSSVLQPWQRRIYQILLIPLGLIAADSIYLVSFTKYSSFFMAMLLLHLALGLLLAIPFFVFAVTHAKRMIRM
Ga0066794_100509751	3300005947	Soil	MREATPLAGKPAGVLRPWQRRLYTILLVPLGLIAANAIYLFAFTRDTSFFYAMLLLHLTLGVLVAIPFFVFAVTHAKRMIRMWNRRAKIAGLSIFTMA
Ga0066651_106740091	3300006031	Soil	MAASSASPSKPAGVLRPWQRRLYRLLLIPLGLIAANAIYLFAFTRDTSFFYVMLLLHLALGVLIAIPFFAFAVTHAKRMIRMWNKR
Ga0068871_1018178781	3300006358	Miscanthus Rhizosphere	MSAKELPPARPAGVLQPWQRRLYRLLLIPLGLIAANSIYISAFTRDTSFFYAMLLLHLALGTLIAVPFFIFAVTHAKRMIRMWNKRAKYAG
Ga0066665_113468052	3300006796	Soil	MAASSASPSKHAGVLRPWQRRLYRLLLIPLGLIAANAIYLFAFTRDTSFFYVMLLLHLALGVLIAIPFF
Ga0075433_105457741	3300006852	Populus Rhizosphere	MAAPSTPIPKPAGVLRPWQRRLYRILLIPLGVMAANAIFLVAFTRDTAFFYAMLLTHLALGIAIAIPFFVFAITHAKRMIRMWNKR
Ga0075426_103110472	3300006903	Populus Rhizosphere	MPDSRSARPPGVLRPWQRRLYRILLVPLGLIAANAIYLAAFTRDTAFFYAMLLLHLTLGVLIAVPFFV
Ga0075426_110611991	3300006903	Populus Rhizosphere	MTEPISPPKPSGVLRPWQRRLYRLLLIPLGLIAANAIYLFAFTRDTAFFYSMLLLHLALGIAIAIPFFVFALTHAKRMIRMWNVRA
Ga0075424_1021362181	3300006904	Populus Rhizosphere	MSASPPAPAKPSGVLKPWQRRLYRILLIPLGVMAANAIFLVAFTRDTAFFYAMLLTHLVLGVAIAIPFFVFAVTHAKRMIRMWNKR
Ga0105247_112555982	3300009101	Switchgrass Rhizosphere	MPGAPKSPAPRGVLLPWQRRLYRILLIPLGLMAADSIYLISFTKYSSFFMAMLLLHLALGLLLAIPFFTFAATHARKMIRMRNLR
Ga0105243_130699952	3300009148	Miscanthus Rhizosphere	MVGGTPSGRTAGVLAPWQRRLYRILLVPLGLIAANSIYLAAFTRDTAFFYAMLLLHLTLGLLIAIPFFVFAATHAKRMIRMWNKRAKYAGLAIFTLAIVCVSTGLNM
Ga0111538_133357481	3300009156	Populus Rhizosphere	MSAAFPKPSGPGVLKPWQRRLYRLLLIPLGLIAANSIFISAFTRDTAFFYAMLLLHLTLGLLIAIPFFV
Ga0105241_112198782	3300009174	Corn Rhizosphere	MSEAIPPAAKPAGVLRPWQRRLYRLLLIPLGLIAANAIYLFAFTRDTSFFYVMLLLHLALGVLIAIPFFVFAVTHA
Ga0126374_109509141	3300009792	Tropical Forest Soil	MSQPAPAPKAAGVLRAWQRRLYRILLIPLGLIAANAIYLFAFTRDTAFFYAMLLLHITVGILIAVPFFVFAVTHARRMIRMWNKRAKIAGLSIFT
Ga0126376_116977742	3300010359	Tropical Forest Soil	MESSPSQKPAGVLRPWQRRLYRLLLIPMGLIAANAIYLVAFTRDTSFFYAMLLVHLVLGVLIAIPFFVFAATHAKRMIRMWNVR
Ga0126372_128643372	3300010360	Tropical Forest Soil	VNAPSGVLKPWQRRLYRILLIPLGLIAANAIYLAAFTRDTAFFYVMLLLHLILGVAIAIPFFVFAATHAKRMIRMWNKRAKYAGLAIFTLAVIC
Ga0126377_102525312	3300010362	Tropical Forest Soil	MSVAPAKPSPSGVLKPWQRRLYRLLLIPLGLIAANSIFIAAFTRDTAFFYAMLLLHLTLGLLIAIPFFVFAITHAKRMIRMWNKRAK*
Ga0126379_122119012	3300010366	Tropical Forest Soil	MESSPSQKPAGVLRPWQRRLYRLLLIPMGLIAANAIYLVAFTRDTSFFYAMLLAHLVLGVLIAIPFFVFAATHA
Ga0134128_114788022	3300010373	Terrestrial Soil	MSGKPAGVLRPWQRRLYKILLVPLGLMAANAIYLAAFTRDTAFFYAMLLLHLTLGLLIAIPFFVFAATHAK
Ga0105239_131172101	3300010375	Corn Rhizosphere	MSPDPTRPSGVLKPWQRRLYGLLLIPLGLIAANSIFIAAFTRDTAFFYAMLLLHLTLGLLIAVPFFVFAVTHAKRMIRMWNKRAKYAGLAIFT
Ga0137391_107903881	3300011270	Vadose Zone Soil	MTEPIPSSKPSGVLQPWQRRLYRLLLIPLGLIAANAIYLFAFTRDTAFFYSMLLLHLALGIAIAIPFFVFALTHAKRMIRMW
Ga0137393_110196121	3300011271	Vadose Zone Soil	MEPAAQTKPSGVLRPWQRRLYRLLLIPLGLIAANAIYLFAFTRDTSFFYVMLLLHLALGILVAIPFFVF
Ga0137388_113143621	3300012189	Vadose Zone Soil	MTEPIPSSKPSGVLQPWQRRLYRLLLIPLGLIAANAIYLYGFTRYTSFFYSMLLLHIVLGIAIAIPFFVFAVTHA
Ga0137374_112635271	3300012204	Vadose Zone Soil	MNEAAASAPKTAGVLRPWQRRLYRLLLIPLGLIAANAIYLYSFTRDTAFFYSMLLLHLTLGVLIAIPFFVFAMTHAKRMIHMWNKRAKIAGLSIFTLAVVCVSSGVFM
Ga0137380_107065061	3300012206	Vadose Zone Soil	MIEAAASAPKIAGVLRPWQRRLYRLLLIPLGLIAANAIYLYSFTRDTAFFYSMLLLHLTLGVLIAIPFFVFAVTHAKRMIHMWNKRAKIAGL
Ga0137372_106879111	3300012350	Vadose Zone Soil	VLRPWQRRLYRLLLIPLGLIAANAIYLYAFTRDTAFFYVMLLLHLTLGVAIAVPFLVFAVTHAKRMIRMWNKRAKY
Ga0137367_104609671	3300012353	Vadose Zone Soil	LRPWQRRLYRLLLIPLGLIAANAIYLVAFTRDTTFFYAMLLMHLVLGLAIAIPFFTFALTHAKRMI
Ga0137369_101170941	3300012355	Vadose Zone Soil	MTSSGSPSKPSGVLRPWQRRLYRILLIPRGLIAANAIYLAAFTRDTTFFYAMLLTHLALGIAIAVPFFV
Ga0137368_108855471	3300012358	Vadose Zone Soil	MNEAAASAPKTAGVLRPWQRRLYRLLLIPLGLIAANAIYLYSFTRDTAFFYSMLLLHLTLGVLIAIPFF
Ga0137375_112554772	3300012360	Vadose Zone Soil	VSEATRSVAKPAGVLRPWQRRLYGLLLIPLGLIAANAIYLYAFTRDTAFFYTMLLLHLTLGVLIAIPFFVFAMTHAKRMIHMWNK
Ga0137373_110696151	3300012532	Vadose Zone Soil	VSEATRSVAKPAGVLRPWQRRLYGLLLIPLGLIAANAIYLYAFTRDTAFFYTMLLLHLTLGVLIAIPFFVFAMTHAKRM
Ga0126375_119366292	3300012948	Tropical Forest Soil	VTDAPSKPSGVLRPWQRRLYRLLLIPLGLIAANAIYLYGFTRDTSFFYTMLLLHLVLGIAIAIPFFVFAITHAKRMIRMWNKRAK
Ga0164305_104868762	3300012989	Soil	MGDAVRSANRPAGVLRPWQRRLYRLLLIPLGLIAANAIYLFGFTRDTAFFYAMLLLHLTLGVLIAIPFFVFA
Ga0134078_105028261	3300014157	Grasslands Soil	MSASRPAPAKPSGVLRPWQRRLYRILLIPLGLIAANAIYLAAFTRDTAFFYAMLLLHLALGIAIAIPFFVFAITHAKRM
Ga0163163_102037041	3300014325	Switchgrass Rhizosphere	MSAKDLPPARPAGVLQPWQRRLYRLLLIPLGLIAANSIYISAFTRDTSFFYAMLLLHLALGILIAVPFFVFAVTHAKRMIRMWNKRAKYA
Ga0157376_109518263	3300014969	Miscanthus Rhizosphere	MVGGTPTGRPAGVLAPWQRRLYRILLIPLGLIAANSIFLAAFTRDTAFFYAMLLLHLTLGVLIAIPFFVFAATHAKRMIRMWNKR
Ga0132256_1029304731	3300015372	Arabidopsis Rhizosphere	MVGGTPTGRPAGVLAPWQRRLYRILLIPLGLIAANSIFLAAFTRDTAFFYAMLLLHLTLGVLIAIPFFVFAATHAKRMIRMWNKRAKYAGLAIFSLAVVC
Ga0132256_1032536101	3300015372	Arabidopsis Rhizosphere	MVPDAPAPAKPSGVLRPWQRRLYSLLLVPLGLIAANSIFIAAFTRDTAFFYAMLLLHLTLGVLIAVPFF
Ga0182036_110660722	3300016270	Soil	MSERAPRPRPAGVLQPWQRRLYRILLVPLGLIAANSIYIAAFTRDTSFFYAMLLLHLALGLLIAIPFFVFAL
Ga0187779_112024352	3300017959	Tropical Peatland	MSASGSETARPAGVLRPWQRRLYRILLVPLGLIAANSIYLAAFTRDTSFFYAMLLLHLTLGLLIAIPFFVFALTHA
Ga0187776_116054451	3300017966	Tropical Peatland	MGASAPANAAGVLRPWQRRLYRLLLIPLGVMAANAIYLAAFTRETAFFYAMLLLHLVLGLLIAIPF
Ga0187777_100804481	3300017974	Tropical Peatland	MADPTPAQPAGVLRPWQRRLYRLLLIPLGVMAANAIYLAAFTRDTAFFYAMLLLHLTLGILIAL
Ga0184604_102126281	3300018000	Groundwater Sediment	MSGATSTPPASRPSGVLRPWQRRLYRLLLIPLGLIAANTIYLAAFTRDTAFFYAMLLTHLALGIAIAIPFFVFAITHAKRMIRMWNKRAKYAGLAIFSLATI
Ga0187766_103763112	3300018058	Tropical Peatland	MPESAASPKPSGVLKPWQRRLYGLLLIPLGLIAANAIYLFAFTRDTSFFYAMLLLHLALGIAIAVPFFVFAVTHAKRMIRMWNK
Ga0184619_103915972	3300018061	Groundwater Sediment	MTASGSPSKPSGVLRPWQRRLYRLLLIPLGLIAANAIYLAAFTRDTAFFYAMLLTHLALGIAIAIPFFVFAITHAKRMIRMWNKRAKYAG
Ga0184609_104523742	3300018076	Groundwater Sediment	MSASAPAPAKPSGVLRPWQRRLYRLLLIPLGLIAANSIYLAAFTRDTSFFYAMLLSHLVLGIAIAIPFFVFAITHA
Ga0210382_104836481	3300021080	Groundwater Sediment	MTSSGSPAKPSGVLRPWQRRLYRLLLIPLGLIAANSIYLAAFTRDTSFFYAMLLSHLVLGIAIAIPFFVFAITHAKRMVRM
Ga0207662_107154511	3300025918	Switchgrass Rhizosphere	MAAPSTPIPKPAGVLRPWQRRLYRILLIPLGVMAANAIFLVAFTRDTAFFYAMLLTHLALGIAIAIPFFVFAITHAKRMIRMWNKRAKIA
Ga0207646_100245054	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTSFGSPSKPSGVLRPWQRRLYRILLVPLGLIAANAIYLAAFTRDTAFFYAMLLLHLALGIAIAIPFFVF
Ga0207681_114751702	3300025923	Switchgrass Rhizosphere	MSPDPTRPSGVLKPWQRRLYGLLLIPLGLIAANSIFIAAFTRDTAFFYAMLLLHLTLGLLIAVPFFVFAVTHAKRMIRMWNKR
Ga0207659_101017621	3300025926	Miscanthus Rhizosphere	MSPDPTRPSGVLKPWQRRLYGLLLIPLGLIAANSIFIAAFTRDTAFFYAMLLLHLTLGLLIAVPFFVFAVTHAK
Ga0207701_112487972	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAAPSTPIPKPAGVLRPWQRRLYRILLIPLGVMAANAIFLVAFTRDTAFFYAMLLTHLALGIAIAIPFFVFAITHAKRMIRMWN
Ga0207691_109014091	3300025940	Miscanthus Rhizosphere	MSAAPASGKPSGVLKPWQRRLYRVLLVPLGLIAANSIYLVAFTRDTTFFYAMLLTHLALGLLIAIPFFVF
Ga0207679_114656452	3300025945	Corn Rhizosphere	MSSAPGPGKPAGVLKPWQRRLYRILLIPLGLIAANSIYLVAFTRDTKFFYAMLLTHLALGLLIAIPFFVFAL
Ga0207676_103509981	3300026095	Switchgrass Rhizosphere	MVGGTPSGRTAGVLAPWQRRLYRILLVPLGLIAANSIYLAAFTRDTAFFYAMLLLHLTLGLLIAIPFFVFAA
Ga0209840_10402872	3300026223	Soil	MREATPLAGKPAGVLRPWQRRLYTILLVPLGLIAANAIYLFAFTRDTSFFYAMLLLHLTLGVLVAIPFFVFAV
Ga0209968_10501161	3300027526	Arabidopsis Thaliana Rhizosphere	MSAEAPSTAKTPGVLKPWQRRLYRLLLIPLGVMAANAIFLVAFTRDTAFFYAMLLTHLALGIAIAIPFFVFAITHAK
Ga0209966_11163991	3300027695	Arabidopsis Thaliana Rhizosphere	MSAEAPSTAKTPGVLKPWQRRLYRLLLIPLGVMAANAIFLVAFTRDTAFFYAMLLTHLALGIAIAIPFFVFAITHAKRMIRMWN
Ga0209283_108985992	3300027875	Vadose Zone Soil	MTEPIPSSKPSGVLRPWQRRLYRLLLIPFGLIAANAIYLFAFTRDTAFFYSMLLLHLALGIVND
Ga0268264_101044043	3300028381	Switchgrass Rhizosphere	MAAPPTPTPKPAGVLRPWQRRLYRILLIPLGVMAANAIFLVAFTRDTAFFYAMLLTHLALGIAIAIPFFVFAITHAKRMIRMWNKRAKIAGLAIFTLAV
Ga0268264_108379311	3300028381	Switchgrass Rhizosphere	MPGAPKSPAPKGVLLPWQRRLYRILLIPLGLMAADSIYLISFTKYSSFFMAMLLLHLALGLLLAVPFFTFAATHAKKMIRMRN
Ga0268386_100747923	3300030619	Soil	MSDSQPTPAKPSGVLRPWQRRLYRILLIPLGVMAANAIFLVAFTRDTAFFYAMLLTHLVLGVAIAIPFFVFAVTHAKRMIRMWNK
Ga0265342_101877461	3300031712	Rhizosphere	MSASAPPTARPAGVLQPWQRRLYRILLVPLGLIAANSIYLVAFTRDTSFFYAMLLLHLALGLLLAIPFFVFAL
Ga0318546_111663462	3300031771	Soil	MVGGTPSGRPAGVLAPWQRRLYRILLVPLGLIAANSIYLAAFTRDTAFFYAMLLLHLTLGLLIAIPFFVFAATHAKRMIRMWNKRAKYAGLAIFTLAVVCVSTGLY
Ga0318548_106199252	3300031793	Soil	MSEHAPRPRPAGVLQPWQRRLYRILLIPLGLIAANSIYITAFTRDTSFFYAMLLLHLALGLLIAIPFFVFALTHARRMIRMWN
Ga0318557_105174182	3300031795	Soil	MSVPGPSGVLKPWQRRLYRLLLIPLGLIAANAIYLVAFTRDTAFFYAMLLLHLVLGVLIAVPFFVFAVTHAK
Ga0318558_106690511	3300032044	Soil	MSERAPGPRPAGVLRPWQRSLYRILLVPLGLIAANSIYLAAFTRDTSFFYAMLLLHLALGLLIAIPFFV
Ga0307470_115219321	3300032174	Hardwood Forest Soil	MSAAPPKPSPSGVLKPWQRRLYRLLLIPLGLIAANSIFIAAFTRDTAFFYAMLLMHLTLGLLIAIPFFVFAVTHAKRMIR
Ga0307471_1019844952	3300032180	Hardwood Forest Soil	MTTTAPVSKPSGVLRPWQRLLYRALLIPLGLIAANAIYLFAFTRDTAFFYAMLLLHLVLGIAVSIPFFVFAMTHAK
Ga0306920_1030850432	3300032261	Soil	MSVPGPSGVLKPWQRRLYRLLLIPLGLIAANAIYLVAFTRDTAFFYAMLLLHLVLGVLIAVPFFVFAVTHAKRMIR
Ga0326726_106461341	3300033433	Peat Soil	MSEAAPSAQKPAGVLRPWQRRLYGLLLIPLGLIAANAIYLYAFTRDTAFFYVMLLLHLTLGVAIAIPFFVFALTHAKRMIR
Ga0326726_115420062	3300033433	Peat Soil	VTEASAPSKPSGVLKPWQRRLYGILLIPLGLIAANAIYLFAFTRDTSFFYAMLLLHLVLGVAIAVPFFV
Ga0247829_115910322	3300033550	Soil	MSPDPTRPSGVLKPWQRRLYGLLLIPLGLIAANSIFIAAFTRDTAFFYAMLLLHLTLGLLSPFPSSSSP
Ga0364946_091094_3_281	3300033815	Sediment	MVEGAPATKPSGVLRPWQRRLYRLLLIPLGLIAANSIYIFAFTRDTAFFYAMLLLHLTLGLAIAIPFFVFAITHAKKMIRMWNKRAKYAGLAI
Ga0373948_0099854_452_682	3300034817	Rhizosphere Soil	MAAPSTPIPKPAGVLRPWQRRLYRILLIPLGVMAANAIFLVAFTRDTAFFYAMLLTHLALGIAIAIPFFVFAITHAK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103334

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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