Metagenome / Metatranscriptome Family F103267

Basic Information
Family ID	F103267
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	52 residues
Representative Sequence	MEVELFAFPTMENPKAVEVTFCELLNAKRRGESLPVEALDWMDTANTWLLESK
Number of Associated Samples	73
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.26 %
% of genes near scaffold ends (potentially truncated)	36.63 %
% of genes from short scaffolds (< 2000 bps)	72.28 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (67.327 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (21.782 % of family members)
Environment Ontology (ENVO)	Unclassified (41.584 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (46.535 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1NpDRAFT_102204202 2B570J29032_1087901921 3B570J29032_1098107373 4B570J40625_1001940764 5JGI25909J50240_10937821 6JGI25925J51416_100732661 7Ga0065166_102921842 8Ga0007760_100747712 9Ga0007757_112849414 10Ga0070374_102465572 11Ga0068876_1000192839 12Ga0068876_1001531318 13Ga0068876_1003350713 14Ga0068876_100979153 15Ga0068876_107056482 16Ga0078894_102649295 17Ga0078894_103447623 18Ga0075470_1000223813 19Ga0075470_100727776 20Ga0070744_100003017 21Ga0075471_100189607 22Ga0102873_11141853 23Ga0102917_12943614 24Ga0102921_11666273 25Ga0102896_12582084 26Ga0102865_10541871 27Ga0102898_11721312 28Ga0108970_105338205 29Ga0108970_115937805 30Ga0114340_11092143 31Ga0114341_104970303 32Ga0114346_10399223 33Ga0114346_11276633 34Ga0114346_11825534 35Ga0114346_12849425 36Ga0114363_102155911 37Ga0114363_11155755 38Ga0114363_11965341 39Ga0114364_10735884 40Ga0114876_100966913 41Ga0102888_10819121 42Ga0102911_11285345 43Ga0102830_12078932 44Ga0114975_107531643 45Ga0105102_104561683 46Ga0129333_103170083 47Ga0129333_115686794 48Ga0151620_100655121 49Ga0151620_10862731 50Ga0151620_11549751 51Ga0181358_10257142 52Ga0181349_11416631 53Ga0181346_11240201 54Ga0181359_10107637 55Ga0181359_12031914 56Ga0207193_18780822 57Ga0211732_15478506 58Ga0211736_103052026 59Ga0211736_1034352611 60Ga0211733_108912742 61Ga0211726_109288895 62Ga0211731_117195951 63Ga0208228_10067847 64Ga0222715_105704132 65Ga0222714_102420051 66Ga0222712_100800598 67Ga0181351_12293792 68Ga0244777_1000204321 69Ga0244777_104835563 70Ga0208546_100200510 71Ga0208546_10717871 72Ga0208173_10502891 73Ga0208440_10904894 74Ga0255131_10465593 75Ga0255124_10365683 76Ga0208974_11858012 77Ga0209599_100407404 78Ga0209442_11297653 79Ga0209990_100984743 80Ga0209990_102162994 81Ga0247723_10803382 82Ga0247723_11408183 83Ga0315907_1000008848 84Ga0315907_108324815 85Ga0315907_109251001 86Ga0315907_110414131 87Ga0315908_100987111 88Ga0315900_110509522 89Ga0315904_104532274 90Ga0315904_104534181 91Ga0315906_100123351 92Ga0315902_101041846 93Ga0315902_102759331 94Ga0315903_100059181 95Ga0315903_109595851 96Ga0334977_0429612_114_323 97Ga0334982_0019022_751_924 98Ga0334996_0055665_3_149 99Ga0335030_0791704_2_142 100Ga0335068_0262155_3_152 101Ga0335052_0319762_443_616
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1NpDRAFT_102204202 2B570J29032_1087901921 3B570J40625_1001940764 4Ga0068876_100979153 5Ga0078894_102649295 6Ga0114346_12849425 7Ga0105102_104561683 8Ga0315908_100987111 9Ga0315903_109595851 10Ga0334977_0429612_114_323
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1NpDRAFT_102204202 2B570J29032_1087901921 3B570J40625_1001940764 4Ga0068876_100979153 5Ga0078894_102649295 6Ga0114346_12849425 7Ga0105102_104561683 8Ga0315908_100987111 9Ga0315903_109595851 10Ga0334977_0429612_114_323
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.94% β-sheet: 7.55% Coil/Unstructured: 41.51%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01818	Translat_reg	11.88
PF04308	RNaseH_like	7.92
PF01653	DNA_ligase_aden	3.96
PF16790	Phage_clamp_A	1.98
PF08291	Peptidase_M15_3	0.99
PF13505	OMP_b-brl	0.99
PF11753	DUF3310	0.99
PF00004	AAA	0.99
PF00149	Metallophos	0.99
PF08534	Redoxin	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	3.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	32.67 %
Unclassified	root	N/A	67.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	0.99 %
Unclassified	root	N/A	67.33 %
Viruses	superkingdom	All Organisms → Viruses	31.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.99 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	26.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.95 %
Unclassified	root	N/A	67.33 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.99 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	26.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.95 %
Unclassified	root	N/A	67.33 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.95 %
Unclassified	root	N/A	67.33 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	26.73 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	26.73 %
Ignavibacteriae	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.95 %
Unclassified	root	N/A	67.33 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.99 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	14.85 %
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.95 %
Straboviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Straboviridae	0.99 %
Unclassified	root	N/A	67.33 %

Name	Rank	Taxonomy	Distribution
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	0.99 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.95 %
Straboviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Straboviridae	0.99 %
Unclassified	root	N/A	67.33 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14.85 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000929\|NpDRAFT_10220420	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1306	Open in IMG/M
3300002408\|B570J29032_108790192	Not Available	510	Open in IMG/M
3300002408\|B570J29032_109810737	Not Available	1421	Open in IMG/M
3300002835\|B570J40625_100194076	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2214	Open in IMG/M
3300003393\|JGI25909J50240_1093782	Not Available	597	Open in IMG/M
3300003497\|JGI25925J51416_10073266	Not Available	857	Open in IMG/M
3300004112\|Ga0065166_10292184	Not Available	664	Open in IMG/M
3300004793\|Ga0007760_10074771	Not Available	925	Open in IMG/M
3300004810\|Ga0007757_11284941	Not Available	544	Open in IMG/M
3300005517\|Ga0070374_10246557	Not Available	914	Open in IMG/M

Showing 1 to 10 of 101 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.02%
Host-Associated	Host-Associated	1.98%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.05%
Plants	Host-Associated → Plants	1.98%
Terrestrial	Environmental → Terrestrial	2.97%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.97%
Freshwater	Environmental → Aquatic → Freshwater	70.30%
Leaf	Host-Associated → Plants → Leaf	1.98%
Marine	Environmental → Aquatic → Marine	24.75%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	6.93%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	12.87%
Lake	Environmental → Aquatic → Freshwater → Lake	24.75%
Lentic	Environmental → Aquatic → Freshwater → Lentic	26.73%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.97%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.99%
River	Environmental → Aquatic → Freshwater → River	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	12.87%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.96%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	1.98%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.98%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	12.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	24.75%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	23.76%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	12.87%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.97%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.95%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.99%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.98%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	12.87%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.99%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.97%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	12.87%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.94%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	2.97%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.98%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.98%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.99%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	21.78%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.99%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.99%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.99%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.99%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.99%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.98%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	9.90%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004793	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004810	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NpDRAFT_102204202	3300000929	Freshwater And Marine	MEVELFTFPTMENPKAVEDTFCDLLNAKRRGESIPVEALDWMDTANNWLLESK*
B570J29032_1087901921	3300002408	Freshwater	MEVELFAFPTMENPKAVEDTFCDLLNAKRRGESLPVEAL
B570J29032_1098107373	3300002408	Freshwater	MEVELFAFPTMENPKAVEDTFCNLLNAQRRGESLPVEALDWMDTANNWLMESK*
B570J40625_1001940764	3300002835	Freshwater	MEVQIYKFPTMENPKAVEVEYCELLNAQRRGETLPEEVVNWMDSANTWLMESKQW*
JGI25909J50240_10937821	3300003393	Freshwater Lake	MEVELFAFPTMENPKAVENTFCNLLNAQRRGESLPVEALDWMDTANNWLMESK*
JGI25925J51416_100732661	3300003497	Freshwater Lake	MEVELFAFPTMENPKAVENTFCNLLNAQRRGESLPVEALDWMDTANNWLM
Ga0065166_102921842	3300004112	Freshwater Lake	MEVELFAFPTMENPKAVEVTFCELLNAQRRGETIPTEALDWMDTANNWLMESK*
Ga0007760_100747712	3300004793	Freshwater Lake	MEVELFAFPTMENPKAVEDTFCNLLNAKRRGESIPVEALDWMDTANNWLLESK*
Ga0007757_112849414	3300004810	Freshwater Lake	MEVELFAFPTMENPKAVENTFCNLLNAKRRGESIPVEALDWMDTANNWLLESK*
Ga0070374_102465572	3300005517	Freshwater Lake	MNVELFAFPTMENPKAVEDTFCDLLNAKRRGESIPVEALDWMDTANNWLLESK*
Ga0068876_1000192839	3300005527	Freshwater Lake	MEVELFAFPTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMDTANNWLLESK*
Ga0068876_1001531318	3300005527	Freshwater Lake	MEVEVYSFPTMENPKAVEITYCELLNAQRRGETLPVEALDWMDSANTWLLESK*
Ga0068876_1003350713	3300005527	Freshwater Lake	MEVELFAFPTMENPKAVEVTFCELLNAKRRGESLPVEALDWMDTANTWLLESK*
Ga0068876_100979153	3300005527	Freshwater Lake	MEVEVYSFPTMENPKDVEFTYCEILNAQRRGELIPVEALDWMDSANTWLIESRKCVT*
Ga0068876_107056482	3300005527	Freshwater Lake	MEVEVYSFPTMENPKAVEVTYCELLNAQRRGEFIPVEVLDWMDTANTWLIESRTCLT*
Ga0078894_102649295	3300005662	Freshwater Lake	MVDVYMHEFPTMSNPRDVELKYCELLNAQRSGESLPVEAIDWMDSANTWLMESK*
Ga0078894_103447623	3300005662	Freshwater Lake	MEVELFAFPTMENPKAVEVTFCELLNAQRRGETLPTEALDWMDTANNWLMESK*
Ga0075470_1000223813	3300006030	Aqueous	MEVELFTFPTMEDPKAVEVTFCELLNAQRRGESLPLEALDWMDTANTWLLESK*
Ga0075470_100727776	3300006030	Aqueous	MEVEVYSFPTMENPKAVEVTYCELLNAQRRGETLPVEAIDWMDTANTWLIESRTCIT*
Ga0070744_100003017	3300006484	Estuarine	MEVELFTFPTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMDTANNWLLESK*
Ga0075471_100189607	3300006641	Aqueous	MEVEVYSFPTMENPKAVEVTYCELLNAQRRGETIPVEAVDWMDSANTWLIESRGSVT*
Ga0102873_11141853	3300007545	Estuarine	MEVELFTFPTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMDTANNWLLE
Ga0102917_12943614	3300007590	Estuarine	MEVELFAFTTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMDTANNWLLESK*
Ga0102921_11666273	3300007603	Estuarine	MNVELFAFPTMENPKAVEDTFCDLLNAKRRGESIPVEALDWM
Ga0102896_12582084	3300007618	Estuarine	AFPTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMDTANNWLLESK*
Ga0102865_10541871	3300007639	Estuarine	TMENPKAVEDTFCDLLNAKRRGESIPVEALDWMDTANNWLLESK*
Ga0102898_11721312	3300007658	Estuarine	MEVELFTFPTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMD
Ga0108970_105338205	3300008055	Estuary	MNVELFAFPTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMDTANNWLMESK*
Ga0108970_115937805	3300008055	Estuary	MEVELFAFPTMENPKAVEVTFCELLNDKRRGESLPVEALDWMDTANTWLLESK*
Ga0114340_11092143	3300008107	Freshwater, Plankton	MEYLMEVELFAFPTMENPKAVEVTFCELLNAKRRGESLPVEALDWMDTANTWLLESK*
Ga0114341_104970303	3300008108	Freshwater, Plankton	MEVELFAFPTMENPKAVEDTFCNLLNAKRRGESLPVEALDWMDTANNWLLES
Ga0114346_10399223	3300008113	Freshwater, Plankton	MVDVYMHKFPTMTNPRDVELKYCELLNAQRSGESLPVEAIDWMDSANTWLMESK*
Ga0114346_11276633	3300008113	Freshwater, Plankton	MEVQIYKFPTMENPKAVEVEYCELLNAQRRGETLPEEVVNWMDSANTWLLESKQW*
Ga0114346_11825534	3300008113	Freshwater, Plankton	MEVELFAFPTMENPKAVEVTFCELLNAQRRGEAIPTEALDWMDTANNWLMESK*
Ga0114346_12849425	3300008113	Freshwater, Plankton	MENPKAVEVTFCELLNAKRRGESLPVEALDWMDTANTWLLESK*
Ga0114363_102155911	3300008266	Freshwater, Plankton	MEVELFAFPTMENPKAVEDTFCNLLNAKRRGESLPVEALD
Ga0114363_11155755	3300008266	Freshwater, Plankton	MEVAMEVEVYSFPTMENPKDVEFTYCEILNAQRRGELIPVEALDWMDSANTWLIESRKCVT*
Ga0114363_11965341	3300008266	Freshwater, Plankton	MVDVYMHEFPTMTNPRDVELKYCELLNAQRSGESLPVEAIDWMDSANTWLMESK*
Ga0114364_10735884	3300008267	Freshwater, Plankton	MVDVYMHKFPTMTNPRDVELKYCELLNAQRSGESLPVEAIDWMDSANTWLIESK*
Ga0114876_100966913	3300008448	Freshwater Lake	MEVAVYSFPTMENPKAVEITYCELLNAQRRGETLPVEALDWMDSANTWLLESK*
Ga0102888_10819121	3300008995	Estuarine	MNVELFAFPTMENPKAVEDTFCDLLNAKRRGESIPVEAL
Ga0102911_11285345	3300009049	Estuarine	DYFMNVELFALPTMENPKAVEDTFCDLLNAKRRGESIPVEALDWMDTANNWLLESK*
Ga0102830_12078932	3300009059	Estuarine	MNVELFAVPTMENPKAVEDTFCDLLNAKRRGESIPVEALDWMDTANNWLLESK*
Ga0114975_107531643	3300009164	Freshwater Lake	MNVELFAFPTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMDTANNWLLESK*
Ga0105102_104561683	3300009165	Freshwater Sediment	MEVQVYKFPTMENPKAVEVEYCELLNAQRRGETLPEEVV
Ga0129333_103170083	3300010354	Freshwater To Marine Saline Gradient	MEVIMDVQIYKFPTMENPKAVEVEYCELLNAQRRGETLPEEVVNWMDSANTWLMELK*
Ga0129333_115686794	3300010354	Freshwater To Marine Saline Gradient	MEVIMDVQIYKFPTMENPKAVEVEYCELLNAQRRGETLPEEVINWMDSANTWLLESKQW*
Ga0151620_100655121	3300011268	Freshwater	MEVELFAFPTMENPKAVEVTFCDLLNAQRRGETLPTEALDWMDTANNWLMESK*
Ga0151620_10862731	3300011268	Freshwater	MEVELFAFPTMENPKAVEDTFCNLLNAKRRGESLPVEALDWMDTANNWLLESK*
Ga0151620_11549751	3300011268	Freshwater	MENPKAVEVTFCELLNAQRRGETLPAEALDWMDTANNWLMESK*
Ga0181358_10257142	3300017774	Freshwater Lake	MEVELFAFPTMENPKAVENTFCNLLNAKRRGESLPVEALDWMDTANTWLMESK
Ga0181349_11416631	3300017778	Freshwater Lake	MEVELFAFPTMENRKAVENTFCNLLNAQRRGESLPVEALDWMDTANN
Ga0181346_11240201	3300017780	Freshwater Lake	EVNMEVELFAFPTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMDTANNWLMESK
Ga0181359_10107637	3300019784	Freshwater Lake	MEVELFAFPTMENPKAVENTFCNLLNAQRRGESLPVEALDWMDTANNWLMESK
Ga0181359_12031914	3300019784	Freshwater Lake	MEVELFAFPTMENPKAVENTFCNLLNAKRRGESIPVEALDWMDTANNWLLESK
Ga0207193_18780822	3300020048	Freshwater Lake Sediment	MEVELFAFPTMENPKAVEVTFCELLNAQRRGETIPTEALDWMDTANNWLMESK
Ga0211732_15478506	3300020141	Freshwater	MEVELFAFPTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMDTANNWLLESK
Ga0211736_103052026	3300020151	Freshwater	MNVELFAFPTMENPKAVEDTFCDLLNAKRRGESIPVEALDWMDTANNWLLESK
Ga0211736_1034352611	3300020151	Freshwater	MEVELFAFPTMENPKAVEDTFCDLLNAKRNGEPLPVEALDWMDTANNWLLESK
Ga0211733_108912742	3300020160	Freshwater	MEVEVYSFPTMENPKAVEVTYCELLNAQRRGETIPVEAVDWMDSANTWLIESRGSVT
Ga0211726_109288895	3300020161	Freshwater	MNVELFAFPTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMDTANNWLLESK
Ga0211731_117195951	3300020205	Freshwater	EYILLGDYFMNVELFAFPTMENPKAVEDTFCDLLNAKRRGESIPVEALDWMDTANNWLLESK
Ga0208228_10067847	3300020535	Freshwater	MEVELFAFPTMENPKAVEDTFCDLLNAKRRGESLPVE
Ga0222715_105704132	3300021960	Estuarine Water	MEVELFAFPTMENPKAVEVTFCDLLNAQRRGETLPTEALDWMDTANNWLMESK
Ga0222714_102420051	3300021961	Estuarine Water	MIDIYMHKFPTMTNPRDVELKYCELLNAQRSGESLPVEAIDWMDSANTWL
Ga0222712_100800598	3300021963	Estuarine Water	MVDVYMHKFPTMTNPRDVELKYCELLNAQRSGESLPVEAIDWMDSANTWLMESK
Ga0181351_12293792	3300022407	Freshwater Lake	MEVELFAFPTMENPKAVENTFCNLLNAQRRGESLPVEALDW
Ga0244777_1000204321	3300024343	Estuarine	MEVELFTFPTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMDTANNWLLESK
Ga0244777_104835563	3300024343	Estuarine	MNVELFAFPTMENPKAVEDTFCDLLNAKRRGESIPVEALD
Ga0208546_100200510	3300025585	Aqueous	MEVEVYSFPTMENPKAVEVTYCELLNAQRRGETLPVEAIDWMDTANTWLIESRTCIT
Ga0208546_10717871	3300025585	Aqueous	MEVELFTFPTMEDPKAVEVTFCELLNAQRRGESLPLEALDWMDTANTWLLESK
Ga0208173_10502891	3300027244	Estuarine	LGDYFMNVELFAFPTMENPKAVEDTFCDLLNAKRRGESIPVEALDWMDTANNWLLESK
Ga0208440_10904894	3300027281	Estuarine	NVELFAFPTMENPKAVEDTFCDLLNAKRRGESIPVEALDWMDTANNWLLESK
Ga0255131_10465593	3300027285	Freshwater	MEVELFAFPTMENPKAVENTFCNLLNAQRRGESLPVEALDWMDTA
Ga0255124_10365683	3300027299	Freshwater	MEVELFAFPTMENPKAVEDTFCNLLNAQRRGESLPVEALDWMD
Ga0208974_11858012	3300027608	Freshwater Lentic	MEVELFAFPTMENPKAVEDTFCNLLNAKRRGESLPVEALDWMDTANNWLLESK
Ga0209599_100407404	3300027710	Deep Subsurface	MVDVYMHKFPTMTNPRDVELKYCELLNAQRSGESLPVEAIDWMDSANTWLIESK
Ga0209442_11297653	3300027732	Freshwater Lake	MEVELFAFPTMENPKAVENTFCNLLNAQRRGESLPVEALDWMDTANNWLLESK
Ga0209990_100984743	3300027816	Freshwater Lake	MEVEVYSFPTMENPKDVEFTYCEILNAQRRGELIPVEALDWMDSANTWLIESRKCVT
Ga0209990_102162994	3300027816	Freshwater Lake	MEVEVYSFPTMENPKAVEITYCELLNAQRRGETLPVEALDWMDSANTWLLESK
Ga0247723_10803382	3300028025	Deep Subsurface Sediment	MEVELFAFPTMENPKAVEVTFCELLNAQRRGETLPTEALDWMDTANNWLMESK
Ga0247723_11408183	3300028025	Deep Subsurface Sediment	MEVELFAFPTMENPKAVEDTFCNLLNAKRRGESLPVEALDWMDTANNWLMESK
Ga0315907_1000008848	3300031758	Freshwater	MEVAMEVEVYSFPTMENPKDVEFTYCEILNAQRRGELIPVEALDWMDSANTWLIESRKCV
Ga0315907_108324815	3300031758	Freshwater	ELFAFPTMENPKAVEVTFCELLNAKRRGESLPVEALDWMDTANTWLLESK
Ga0315907_109251001	3300031758	Freshwater	MEVAVYSFPTMENPKAVEITYCELLNARRRGETLPVEALDWMDSANTWLLESK
Ga0315907_110414131	3300031758	Freshwater	EVIMEVEVYSFPTMENPKAVEVTYCELLNAQRRGEFIPVEVLDWMDTANTWLIESRTCLT
Ga0315908_100987111	3300031786	Freshwater	LSSLSFAVDIYYIMESLMEVELFAFPTMENPKAVEVTFCELLNAKRRGESLPVEALDWMDTANTWLLESK
Ga0315900_110509522	3300031787	Freshwater	MEVQIYKFPTMENPKAVEVEYCELLNAQRRGETLPEEVVNWMDSANTWLLESKQW
Ga0315904_104532274	3300031951	Freshwater	MEVELFAFPTMENPKAVEVTFCELLNAKRRGESLPVEALDW
Ga0315904_104534181	3300031951	Freshwater	AFPTMENPKAVEVTFCELLNAKRRGESLPVEALDWMDTANTWLLESK
Ga0315906_100123351	3300032050	Freshwater	MEVELFAFPTMENPKAVEVTFCELLNAQRRGETLPTEALD
Ga0315902_101041846	3300032093	Freshwater	MEVEVYSFPTMAVEVTYCELLNAQRRGEFIPVEVLDWMDTANTWLIESRTCLT
Ga0315902_102759331	3300032093	Freshwater	TMENPKAVEVTFCELLNAKRRGESLPVEALDWMDTANTWLLESK
Ga0315903_100059181	3300032116	Freshwater	MEVEVYSFPTMENPKAVEITYCELLNAQRRGETLPVE
Ga0315903_109595851	3300032116	Freshwater	TTEVIMEVEVYSFPTMENPKAVEITYCELLNAQRRGETLPVEALDWMDSANTWLLESK
Ga0334977_0429612_114_323	3300033978	Freshwater	MITLRDKLNIYYTEENMEVELFAFPTMENPKAVEDTFCNLLNAQRRGESLPVEALDWMDTANNWLMESK
Ga0334982_0019022_751_924	3300033981	Freshwater	MEENMEVELFAFPTMENPKAVEDTFCNLLNAQRRGESLPVEALDWMDTANNWLMESK
Ga0334996_0055665_3_149	3300033994	Freshwater	MEVELFAFPTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMDTANNWL
Ga0335030_0791704_2_142	3300034103	Freshwater	MEENMEVELFAFPTMENPKAVEDTFCNLLNAQRRGESLPVEALDWMD
Ga0335068_0262155_3_152	3300034116	Freshwater	LFAFPTMENPKAVEDTFCDLLNAKRRGESLPVEALDWMDTANNWLLESK
Ga0335052_0319762_443_616	3300034279	Freshwater	MEYLMEVELFAFPTMENPKAVEVTFCELLNAKRRGESLPVEALDWMDTANTWLLESK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103267

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences