Basic Information | |
---|---|
Family ID | F103241 |
Family Type | Metagenome |
Number of Sequences | 101 |
Average Sequence Length | 49 residues |
Representative Sequence | MITPPLVQLLIDAGFTDGWAISGDTLILWEHDQDPPAPLTRPEATDETPSPD |
Number of Associated Samples | 79 |
Number of Associated Scaffolds | 101 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | No |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 96.00 % |
% of genes near scaffold ends (potentially truncated) | 9.90 % |
% of genes from short scaffolds (< 2000 bps) | 76.24 % |
Associated GOLD sequencing projects | 70 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.42 |
Hidden Markov Model |
---|
|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Duplodnaviria (72.277 % of family members) |
NCBI Taxonomy ID | 2731341 |
Taxonomy | All Organisms → Viruses → Duplodnaviria |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (36.634 % of family members) |
Environment Ontology (ENVO) | Unclassified (74.257 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (53.465 % of family members) |
⦗Top⦘ |
Full Alignment |
---|
Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60. |
Powered by MSAViewer |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 10.00% β-sheet: 10.00% Coil/Unstructured: 80.00% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
|||||
Powered by Feature Viewer |
Structure Viewer | |
---|---|
| |
Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.42 |
Powered by PDBe Molstar |
⦗Top⦘ |
⦗Top⦘ |
Visualization |
---|
All Organisms Unclassified |
Powered by ApexCharts |
⦗Top⦘ |
Visualization |
---|
Freshwater Sediment Freshwater Freshwater Freshwater Lake Freshwater Lentic Freshwater Freshwater Lake Freshwater Lake Freshwater Aquatic Surface Ice Aqueous Estuarine Estuarine Soil |
Powered by ApexCharts |
⦗Top⦘ |
Protein ID | Sample Taxon ID | Habitat | Sequence |
B570J29032_1098848833 | 3300002408 | Freshwater | MIEKTKNEELCEMLAKKGFDTGWALLGETLTIWEHDQDPPAPLTRPQATDETPSPA* |
B570J40625_1012254521 | 3300002835 | Freshwater | MTHEELVELLHNAGFADGWAMSGDTLVIWQHDQDPPAPLTRPEATDET |
B570J40625_1015588232 | 3300002835 | Freshwater | MITPPLVQLLLDAGFIDGWAMAGETLTIWEHEEDPPAPLTRPQTDEPLE |
JGI25921J50272_100480082 | 3300003430 | Freshwater Lake | MVQLLLDAGFNDGWVMSNDVLVVWEHDVDPPAPLERPTDE* |
Ga0065166_101642032 | 3300004112 | Freshwater Lake | MKTPPMVQLLLDAGFNDGWVMSNDVLVVWEHDVDPPAPLERPTDE* |
Ga0049081_100186442 | 3300005581 | Freshwater Lentic | MITPPMIQLLLDNGFTDGWAMSEETLVLWEHDEEPPAPLVRPAE* |
Ga0049080_100059905 | 3300005582 | Freshwater Lentic | MITPPTVELLRKAGFDSGWALSDDTLILWEHDQEPPAPLTRPEATDETPSPD* |
Ga0049082_103154822 | 3300005584 | Freshwater Lentic | MITPPMVQLLVDAGFNTGWAMAGDVLVLWEHDANPPAPLTRPEPTEPLE* |
Ga0078894_104546572 | 3300005662 | Freshwater Lake | MNTSPMAQLLLDAGFTDGWALSGDVLVLWEHDEDPPAPLERPTDE* |
Ga0078894_114894852 | 3300005662 | Freshwater Lake | MNHADAIELLLAAGFDSGWALAEGVLILWEHETDPPAPLERPNE* |
Ga0070744_100735582 | 3300006484 | Estuarine | MTGSPIIQLLLDAGFSDGWAVAGDVLILWEHDQDPPAPLTRPEATDETPTAD* |
Ga0070749_106678082 | 3300006802 | Aqueous | MIVSPMVELLTQAGFTDGWALAEDVLILWEHDEDPPAPLERPA* |
Ga0075464_100061724 | 3300006805 | Aqueous | MITPAVVQLLLDAGFDSGWVCSGEELVLWEHDENPPAPLKRPE* |
Ga0102828_10068402 | 3300007559 | Estuarine | MTHDELCQIVIDAGFDSGWAISGDTLILWEHDQDPPAPLTRPEATDETPSPA* |
Ga0102913_12224562 | 3300007560 | Estuarine | GSMINPPLVQLLIDNGFTDGWAMSGETLVLWEHDVDPPAPLVKPSSTEEGQ* |
Ga0102917_11649301 | 3300007590 | Estuarine | MINPPLVQLLIDNGFTDGWAMSGETLVLWEHDVDPPAPLVKPSSTEEGQ* |
Ga0102917_12885122 | 3300007590 | Estuarine | MTHYEIVKLLNDAGFETGWALLGDTLTIWEHDEDPPAPLTRPEATDETPSPD* |
Ga0102921_13666031 | 3300007603 | Estuarine | MTHKELCQMLYDNGFEDGWCLAGDTLTLWFHDQDPPAPLTRPEATDETPSPD* |
Ga0102859_10525483 | 3300007708 | Estuarine | MNIEISPMHQLLLDAGYNSGWAMTGETLIIWEHDADPPAPLTRPEASDVVAS* |
Ga0114880_10568653 | 3300008450 | Freshwater Lake | MNIEKTPMHQLLLDAGFDSGWAMAEEKLLIWEHDADPPAPLTRPEASDVVAG* |
Ga0114973_101808873 | 3300009068 | Freshwater Lake | MITPPMVELLKTKGFDFGWAMCEETLILWEHDADPPAPLTRPEASDDLAS* |
Ga0114968_100320724 | 3300009155 | Freshwater Lake | MITPPMVQLLLDAGFTDGWAMDGENLVLWEHDVDPPAPLTRPEAQDALAD* |
Ga0114977_101712493 | 3300009158 | Freshwater Lake | MITPPMVQLLIDAGFTDGWAMSEDVLILWEHEEEPPAPLVRPAPLEDL* |
Ga0114978_101811563 | 3300009159 | Freshwater Lake | MITPPMVKLLLDAGFTDGWALENETLVLWEHDVDPPAPLTRPKASNDLAG* |
Ga0105102_101999263 | 3300009165 | Freshwater Sediment | PPMVQMLIEAGYTEGWAIHGDVLVLWEHEQDPPAPLTRPEATDETPSPN* |
Ga0105097_108633022 | 3300009169 | Freshwater Sediment | MIGLELEMMLVEAGFNNGWAIADGKLILWEHDQDPPALLTRPKSTDETPSPD* |
Ga0114969_104494812 | 3300009181 | Freshwater Lake | MIAPPMVKLLLDAGFNSGWAVAGDVLVLWEHDAEPPAPLIRPEPTEPLE* |
Ga0114969_105847241 | 3300009181 | Freshwater Lake | MMTPPIVQLLLDAGFTDGWSLEEETLVLWEHDTDPPSPLIRPEATNETPTA |
Ga0114974_100073826 | 3300009183 | Freshwater Lake | MTHKEATQVLIDAGFQSGWALTGDTLIFWEHDEDPPAPFVRPTE* |
Ga0133913_120727523 | 3300010885 | Freshwater Lake | MTPPIVQLLLDAGFTDGWALEEETLVLWEHDTDPPSPLIRPEATNETPTAD* |
Ga0133913_132493873 | 3300010885 | Freshwater Lake | MITPPMVELLLDAGFTDGWAMAGDVLVLWEHDQDPPAPLIRPEPTEPLE* |
Ga0153799_10891532 | 3300012012 | Freshwater | MIISPMAQLLLDNGFNSGWAMCEETLVLWEHEENPPAPLTRPA* |
Ga0153805_10050502 | 3300012013 | Surface Ice | MKTPPLAQLLLDAGFADGWGMAGETLVLWEHDVDPPAPLTRPEVSDDLAD* |
Ga0164293_103431743 | 3300013004 | Freshwater | MTHDELVELLHEKGFISSWALSDQTLTHWDNDQDPPAPLTRPEATDETPSPD* |
Ga0164293_106669702 | 3300013004 | Freshwater | MTHEELVELLHNAGFADGWAMSGDTLVIWQHDQDPPAPLTRPEATDETPSPA* |
Ga0164293_108733742 | 3300013004 | Freshwater | MITPPMVQLLLDAGFTNGWVVAGDELILWEHEEDPPAPLVRPAE* |
Ga0164292_101471404 | 3300013005 | Freshwater | MTHDELVELLHEKGFISGWALSDQTLTHWDNDQDPPAPLTRPEATDETPSPD* |
Ga0164292_108123822 | 3300013005 | Freshwater | MNIPPMIEVLENAGFTDGWALHGDTLILWEHDQDPPAPLTRPEATDETPSPD* |
Ga0164292_110579052 | 3300013005 | Freshwater | MTHEELVELLHNAGFADGWAMSGDTLVIWQHDQDPPAPLTR |
Ga0177922_107122752 | 3300013372 | Freshwater | MNIELTPMHKLLLQHGYDSGYVISEEILQLWEHDADPPAPLTRPQAVNDLAG* |
Ga0177922_112886392 | 3300013372 | Freshwater | VSHKELIELLLDAGFDSGWAISGDTLILWEHDQDPPAPLTRPEATDETPSPD* |
Ga0119960_10245381 | 3300014811 | Aquatic | MNLSPIAQSLIDAGFTDGWAMADDVLTLWEHEQDPPAPLTRPEATDETPTAD* |
Ga0181347_10562223 | 3300017722 | Freshwater Lake | MIPTPSPMHQLLLDNGFPDGWAMTEEKLILWEHDADPPAPITRPKVSDALED |
Ga0181362_10175633 | 3300017723 | Freshwater Lake | MIPTPSPMHQLLLDNGFPDGWAMTEEKLILWEHDAAPPAPLTRPKVSDALED |
Ga0181365_10432703 | 3300017736 | Freshwater Lake | MTTEEIMALLVDAGFTTGWSLVGTELALWEHDQDPPAPLTRPEVTDEAPTAD |
Ga0181344_10186516 | 3300017754 | Freshwater Lake | MITDPTADLLIEAGFTDGWALSDGVLVLWEHDVDPPAPLVRPDEAPTADA |
Ga0181344_10270143 | 3300017754 | Freshwater Lake | MNTSPMAQLLLDAGFTDGWALSGDVLVLWEHDEDPPAPLERPTDE |
Ga0181343_11015052 | 3300017766 | Freshwater Lake | MITPPLVQLLIDAGFTDGWAISGDTLILWEHDQDPPAPLTRPEATDETPSPD |
Ga0181349_10288293 | 3300017778 | Freshwater Lake | MTHDELCKLLTDNGFNDGWCLVGDILTLWFHDQDPPAPLTRPEATDETPTAD |
Ga0181355_10158444 | 3300017785 | Freshwater Lake | MTHDELCKLLTDNGFNDGWCLVGDILTLWFHDQDPPAPLTRPSDNA |
Ga0181359_10730202 | 3300019784 | Freshwater Lake | MIPTPSPMHQLLLDNGFPDGWAMTEEKLILWEHDADPPAPLTRPKVSDALED |
Ga0211731_102123472 | 3300020205 | Freshwater | MITSPTIQLLLDAGFNSGWAVAGDVLVLWEHDADPPAPLTRPEPIEPLE |
Ga0208088_10018664 | 3300020505 | Freshwater | MIEKTKNEELCEMLAKKGFDTGWALLGETLTIWEHDQDPPAPLTRPQATDETPSPA |
Ga0208082_10770081 | 3300020563 | Freshwater | MSHEELCQMLYDNGFEDGWCLAGDTLTLWFHDQDPPAPLTRPKATDETPSPD |
Ga0181353_11206812 | 3300022179 | Freshwater Lake | MSHEELTKLLEDNGFVDGWCLAGDTLILWEHDQDPPAPLVRPDETPSPD |
Ga0214919_103229372 | 3300023184 | Freshwater | MITPPMIQLLLDNGFTDGWAMSDETLVLWEHEEEPPAPLVRPAE |
Ga0244777_101167944 | 3300024343 | Estuarine | MINPPLVQLLIDNGFTDGWAMSGETLVLWEHDVDPPAPLVKPSSTEEGQ |
Ga0244775_102403282 | 3300024346 | Estuarine | MTGSPIIQLLLDAGFSDGWAVAGDVLILWEHDQDPPAPLTRPEATDETPTAD |
Ga0244776_102508803 | 3300024348 | Estuarine | MNIEISPMHQLLLDAGYNSGWAMTGETLIIWEHDADPPAPLTRPEASDVVAS |
Ga0208916_100033835 | 3300025896 | Aqueous | MITPAVVQLLLDAGFDSGWVCSGEELVLWEHDENPPAPLKRPE |
Ga0208923_11037912 | 3300027320 | Estuarine | MTHDELCQIVIDAGFDSGWAISGDTLILWEHDQDPPAPLTRPEATDETPSPA |
Ga0208966_11374163 | 3300027586 | Freshwater Lentic | MITPPMVQLLVDAGFNTGWAMAGDVLVLWEHDANPPAPLTRPEPTEPLE |
Ga0208974_10042595 | 3300027608 | Freshwater Lentic | MITPPTVELLRKAGFDSGWALSDDTLILWEHDQEPPAPLTRPEATDETPSPD |
Ga0208975_10177882 | 3300027659 | Freshwater Lentic | MITPPMIQLLLDNGFTDGWAMSEETLVLWEHDEEPPAPLVRPAE |
Ga0209297_11110173 | 3300027733 | Freshwater Lake | MITPPMVQLLIDAGFTDGWAMSEDVLILWEHEEEPPAPLVRPAPLEDL |
Ga0209296_10037498 | 3300027759 | Freshwater Lake | MTHKEATQVLIDAGFQSGWALTGDTLIFWEHDEDPPAPFVRPTE |
Ga0209296_13838552 | 3300027759 | Freshwater Lake | MITPPMVKLLLDAGFTDGWALENETLVLWEHDVDPPAPLTRPKASNDLAG |
Ga0209246_100867931 | 3300027785 | Freshwater Lake | MIPTPSPMHQLLLDNGFPDGWAMTEEKLILWEHDADPPAPLTRPQASNDLAG |
Ga0209354_100063657 | 3300027808 | Freshwater Lake | MPTPSPMHQLLLDNGFPDGWAMTEEKLILWEHDADPPAPLTRPKVSDALED |
Ga0209400_11190033 | 3300027963 | Freshwater Lake | MITPPMVQLLLDAGFTDGWAMDGENLVLWEHDVDPPAPLTRPEAQDALAD |
Ga0316621_109012522 | 3300033488 | Soil | MNTSPMAQLLLDAGFTDGWALQGDVLVLWEHDVDPPAPLERPADE |
Ga0334989_0268681_3_119 | 3300033984 | Freshwater | MITPPLVQLLLDAGFTNGWAMFDDTLIIWEHEQDPPAPL |
Ga0334992_0220456_292_450 | 3300033992 | Freshwater | MIYEPTPMHQLLLDNGYTDGWAMTEETLILWEHDEDPPAPLTRPKASDVVAD |
Ga0334994_0005929_906_1064 | 3300033993 | Freshwater | MITPPMIQLLLDAGFTDGWAMSGETLTIWEHDQDPPAPLTRPEATNETPTAD |
Ga0334994_0218081_881_1018 | 3300033993 | Freshwater | MITPPLVQLLLDAGFIDGWAMAGETLTIWEHEEDPPAPLTRPQTDE |
Ga0334994_0275137_60_218 | 3300033993 | Freshwater | MTHEELVELLHNAGFADGWAMSGDTLVIWQHDQDPPAPLTRPEATDETPSPD |
Ga0334994_0387930_151_309 | 3300033993 | Freshwater | MTHDELVELLHEKGFISGWALSDQTLTHWDNDQDPPAPLTRPEATDETPSPD |
Ga0334979_0708986_118_276 | 3300033996 | Freshwater | MNIPPMIEVLENAGFTDGWALHGDTLILWEHDQDPPAPLTRPEATDETPSPD |
Ga0334986_0169800_585_743 | 3300034012 | Freshwater | MTHEQLVELLHNAGFADGWAMSGDTLVIWQHDQDPPAPLTRPEATDETPSPD |
Ga0334986_0412737_13_171 | 3300034012 | Freshwater | MTHEELVELLHNAGFADGWAMSGDTLVIWQHDQDPPAPLTRPEPKDETPSPD |
Ga0334983_0148980_858_1016 | 3300034060 | Freshwater | MITPPMHQLLLDAGFTDGWAMADEVLILWEHDQDPPAPLTRPEATNETPTAD |
Ga0334987_0281210_552_704 | 3300034061 | Freshwater | MTHLEAVQLLNENGYFSGYAITGETLILWLHDEDPPAPLTRPEASDVVAD |
Ga0334995_0036126_4021_4182 | 3300034062 | Freshwater | MITPPLVQLLLDAGFIDGWAMAGETLTIWEHEEDPPAPLTRPQTDEPLEGEQP |
Ga0334995_0106185_126_299 | 3300034062 | Freshwater | MITPPFVQLLIDSGFDDGWALSEETLVLWEHDEDPPAPLVRPQTEEPVDESAGGEQP |
Ga0335019_0035917_374_532 | 3300034066 | Freshwater | MTHEQLVELLHNAGFADGWAMSGDTLVIWQHDQVPPAPLTRPEATDETPSPD |
Ga0335020_0004643_2379_2513 | 3300034082 | Freshwater | MITPPMIQLLLDAGFTDGWAIADDVLTLWEHEEDPPAPLVRPAE |
Ga0335012_0488632_2_127 | 3300034093 | Freshwater | MSENEMVALLLEKGFTSGWAVAEQKLVLWEHDEEPPAPLKRP |
Ga0335022_0169538_1022_1180 | 3300034095 | Freshwater | MIITPSPMHQLLLDAGYNSGWAMTGETLTIWEHDEDPPAPLTRPEVGDDLAD |
Ga0335022_0394098_133_285 | 3300034095 | Freshwater | MIIPPLVQLLLDAGYDSGWAMTGETLTIWEHEEDPPAPLTRPEVVDDLAG |
Ga0335027_0132763_1382_1513 | 3300034101 | Freshwater | MKTPPMIELLLDAGFTDGWAVAGDVLVLWEHDEDPPPPLTRPE |
Ga0335029_0211898_927_1085 | 3300034102 | Freshwater | MITPPMVQLLLDAGFIEGWAMAGETLTLWEHNADPPAPLTRPEPTDETPIAG |
Ga0335031_0289023_594_731 | 3300034104 | Freshwater | MNTPPMVQLLLDAGFTDGWVMSNDVLVLWEHDVDPPAPLERPADE |
Ga0335031_0478297_434_592 | 3300034104 | Freshwater | MNLSPIAQLLIDAGFTDGWAMSGDTLILWEHDQDPPAPLTRPEATDETLSHD |
Ga0335036_0104056_1060_1212 | 3300034106 | Freshwater | MTHEDAIKVLVDAGFEAGWAMAGDILILWQHDADPPAPFTRPEVSDVVAD |
Ga0335036_0318051_429_587 | 3300034106 | Freshwater | MITPPMHQLLLDAGFTDGWAMADEVLILWEHDQDPPTPPTRPEATDETPTAD |
Ga0335053_0163870_632_790 | 3300034118 | Freshwater | MTHEQLVQLLHDAGFTSGWAMSGNSLIIWQHDQDPPAPLTRPEATDETPSPD |
Ga0335049_0524844_587_745 | 3300034272 | Freshwater | MNIPPMIEVLENAGFTDGWALHGETLILWEHDQDPPAPLTRPEATDETHSPD |
Ga0335007_0001888_3065_3199 | 3300034283 | Freshwater | MVQLLLDNGFTDGWAMSGETLVLWEHDVDPPAPLVKPSSTEEGQ |
Ga0335007_0152009_13_171 | 3300034283 | Freshwater | MITPPLVQLLIDAGFTNGWAMFDDTLIIWEHEQDPPAPLTRPEATDETPSPD |
Ga0335007_0155254_844_978 | 3300034283 | Freshwater | MITPPMVQLLIDAGFIDGWVISGDVLTLWEHDEDPPAPLVRPAE |
Ga0335013_0585839_22_180 | 3300034284 | Freshwater | MTHEELVELLHNAGFADGWAMSGDTLVIWQHDQDPPAPLTRPEATDETPSPA |
⦗Top⦘ |