Metagenome / Metatranscriptome Family F103204

Basic Information
Family ID	F103204
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	66 residues
Representative Sequence	MTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPISEALIDEVAPERRH
Number of Associated Samples	95
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.34 %
% of genes near scaffold ends (potentially truncated)	42.57 %
% of genes from short scaffolds (< 2000 bps)	94.06 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (50.495 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.871 % of family members)
Environment Ontology (ENVO)	Unclassified (34.653 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.614 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.77% β-sheet: 0.00% Coil/Unstructured: 53.23%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00293	NUDIX	37.62
PF01569	PAP2	1.98
PF00583	Acetyltransf_1	0.99
PF01471	PG_binding_1	0.99
PF07969	Amidohydro_3	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.50 %
Unclassified	root	N/A	49.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.50 %
Unclassified	root	N/A	49.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.50 %
Unclassified	root	N/A	49.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	7.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.94 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	7.92 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	4.95 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.99 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.99 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.99 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.99 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	7.92 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	4.95 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.99 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.99 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.99 %
Aminobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter	0.99 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	7.92 %
Azospirillum lipoferum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum	4.95 %
Aminobacter carboxidus group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → Aminobacter carboxidus group	0.99 %
Microvirga antarctica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga antarctica	0.99 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.99 %
Magnetospirillum gryphiswaldense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum gryphiswaldense	0.99 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.50 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	7.92 %
Azospirillum lipoferum 4B	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum → Azospirillum lipoferum 4B	4.95 %
Sphingomonas sp. S2-65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. S2-65	0.99 %
Aminobacter lissarensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → Aminobacter carboxidus group → Aminobacter lissarensis	0.99 %
Microvirga antarctica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga antarctica	0.99 %
Magnetospirillum gryphiswaldense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum gryphiswaldense	0.99 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y02GP05J	Not Available	610	Open in IMG/M
2209111006\|2214833278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	643	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100551284	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300004643\|Ga0062591_102028449	Not Available	594	Open in IMG/M
3300005161\|Ga0066807_1013456	Not Available	780	Open in IMG/M
3300005168\|Ga0066809_10045903	Not Available	967	Open in IMG/M
3300005169\|Ga0066810_10009791	Not Available	1390	Open in IMG/M
3300005332\|Ga0066388_100691511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1628	Open in IMG/M
3300005354\|Ga0070675_101419004	Not Available	640	Open in IMG/M
3300005438\|Ga0070701_10450998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300005444\|Ga0070694_100038905	All Organisms → cellular organisms → Bacteria	3162	Open in IMG/M
3300005456\|Ga0070678_100476560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1097	Open in IMG/M
3300005563\|Ga0068855_101113533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300005719\|Ga0068861_100239306	All Organisms → cellular organisms → Bacteria → Proteobacteria	1543	Open in IMG/M
3300005844\|Ga0068862_101662900	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300006577\|Ga0074050_11957253	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300006580\|Ga0074049_12668314	Not Available	517	Open in IMG/M
3300006844\|Ga0075428_100467500	Not Available	1350	Open in IMG/M
3300006854\|Ga0075425_101096945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	906	Open in IMG/M
3300009094\|Ga0111539_10578929	Not Available	1307	Open in IMG/M
3300009100\|Ga0075418_13070767	Not Available	509	Open in IMG/M
3300009156\|Ga0111538_13099024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum → Azospirillum lipoferum 4B	580	Open in IMG/M
3300009156\|Ga0111538_14025754	Not Available	508	Open in IMG/M
3300009177\|Ga0105248_13091295	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300009545\|Ga0105237_10959026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	862	Open in IMG/M
3300009553\|Ga0105249_10404774	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300009553\|Ga0105249_10426747	Not Available	1360	Open in IMG/M
3300009553\|Ga0105249_12865210	Not Available	553	Open in IMG/M
3300010029\|Ga0105074_1094348	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010043\|Ga0126380_10008359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4523	Open in IMG/M
3300010047\|Ga0126382_10197879	Not Available	1427	Open in IMG/M
3300010362\|Ga0126377_11844935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum → Azospirillum lipoferum 4B	680	Open in IMG/M
3300010373\|Ga0134128_12518689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum gryphiswaldense	567	Open in IMG/M
3300010375\|Ga0105239_11368400	Not Available	817	Open in IMG/M
3300010399\|Ga0134127_13586340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum → Azospirillum lipoferum 4B	509	Open in IMG/M
3300010400\|Ga0134122_10315466	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300010403\|Ga0134123_10327991	Not Available	1371	Open in IMG/M
3300012492\|Ga0157335_1004562	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300012493\|Ga0157355_1004001	Not Available	921	Open in IMG/M
3300012501\|Ga0157351_1050455	Not Available	546	Open in IMG/M
3300012902\|Ga0157291_10365476	Not Available	523	Open in IMG/M
3300012948\|Ga0126375_10328774	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300012957\|Ga0164303_11012354	Not Available	592	Open in IMG/M
3300012958\|Ga0164299_10937489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum → Azospirillum lipoferum 4B	632	Open in IMG/M
3300012984\|Ga0164309_11239785	Not Available	628	Open in IMG/M
3300012986\|Ga0164304_11119614	Not Available	631	Open in IMG/M
3300012987\|Ga0164307_11615702	Not Available	549	Open in IMG/M
3300012988\|Ga0164306_11620983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum → Azospirillum lipoferum 4B	559	Open in IMG/M
3300013306\|Ga0163162_12443953	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300013308\|Ga0157375_13278449	Not Available	540	Open in IMG/M
3300014255\|Ga0075320_1031810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	899	Open in IMG/M
3300014325\|Ga0163163_13114155	Not Available	517	Open in IMG/M
3300014745\|Ga0157377_10473318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	870	Open in IMG/M
3300014968\|Ga0157379_10910630	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300015374\|Ga0132255_103108981	Not Available	708	Open in IMG/M
3300018028\|Ga0184608_10117704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1124	Open in IMG/M
3300018053\|Ga0184626_10275752	Not Available	701	Open in IMG/M
3300018054\|Ga0184621_10242451	Not Available	644	Open in IMG/M
3300018076\|Ga0184609_10060313	Not Available	1638	Open in IMG/M
3300018078\|Ga0184612_10125615	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300018469\|Ga0190270_13108720	Not Available	525	Open in IMG/M
3300018476\|Ga0190274_10487513	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300021078\|Ga0210381_10400804	Not Available	507	Open in IMG/M
3300022886\|Ga0247746_1052360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	942	Open in IMG/M
3300023261\|Ga0247796_1125341	Not Available	509	Open in IMG/M
3300025914\|Ga0207671_10976265	Not Available	668	Open in IMG/M
3300025921\|Ga0207652_11383718	Not Available	607	Open in IMG/M
3300025961\|Ga0207712_10177157	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300026067\|Ga0207678_10696777	Not Available	894	Open in IMG/M
3300026089\|Ga0207648_10569996	All Organisms → cellular organisms → Bacteria → Proteobacteria	1041	Open in IMG/M
3300026894\|Ga0207980_1006790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. S2-65	721	Open in IMG/M
3300027909\|Ga0209382_10472963	Not Available	1384	Open in IMG/M
3300028380\|Ga0268265_10835101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	900	Open in IMG/M
3300028381\|Ga0268264_10309430	Not Available	1490	Open in IMG/M
3300028590\|Ga0247823_10549763	Not Available	870	Open in IMG/M
3300028592\|Ga0247822_10526367	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300028597\|Ga0247820_10497640	Not Available	829	Open in IMG/M
3300028715\|Ga0307313_10232955	Not Available	572	Open in IMG/M
3300028792\|Ga0307504_10247200	Not Available	651	Open in IMG/M
3300028889\|Ga0247827_10034875	Not Available	2208	Open in IMG/M
3300031170\|Ga0307498_10128390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300031170\|Ga0307498_10253030	Not Available	639	Open in IMG/M
3300031562\|Ga0310886_10325996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	885	Open in IMG/M
3300031720\|Ga0307469_10094786	Not Available	2074	Open in IMG/M
3300031820\|Ga0307473_10348372	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300031820\|Ga0307473_11271264	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300031854\|Ga0310904_10912683	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300031858\|Ga0310892_10310850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	997	Open in IMG/M
3300031913\|Ga0310891_10304341	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031944\|Ga0310884_11003622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → Aminobacter carboxidus group → Aminobacter lissarensis	519	Open in IMG/M
3300031949\|Ga0214473_10188587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga antarctica	2390	Open in IMG/M
3300032000\|Ga0310903_10437879	Not Available	672	Open in IMG/M
3300032179\|Ga0310889_10507531	Not Available	612	Open in IMG/M
3300032180\|Ga0307471_100495309	Not Available	1369	Open in IMG/M
3300032205\|Ga0307472_100789366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	866	Open in IMG/M
3300032516\|Ga0315273_10904687	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300033433\|Ga0326726_11477450	Not Available	662	Open in IMG/M
3300033550\|Ga0247829_10021817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4088	Open in IMG/M
3300034090\|Ga0326723_0174260	Not Available	950	Open in IMG/M
3300034090\|Ga0326723_0588200	Not Available	515	Open in IMG/M
3300034176\|Ga0364931_0026317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1675	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.33%
Host-Associated	Host-Associated	31.68%
Engineered	Engineered	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.40%
Plants	Host-Associated → Plants	31.68%
Aquatic	Environmental → Aquatic	6.93%
Solid Waste	Engineered → Solid Waste	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.89%
Sediment	Environmental → Aquatic → Sediment	4.95%
Peat	Environmental → Terrestrial → Peat	2.97%
Freshwater	Environmental → Aquatic → Freshwater	1.98%
Floodplain	Environmental → Terrestrial → Floodplain	0.99%
Roots	Host-Associated → Plants → Roots	0.99%
Grass	Engineered → Solid Waste → Grass	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.95%
Loam	Environmental → Terrestrial → Soil → Loam	3.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Lake	Environmental → Aquatic → Freshwater → Lake	0.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%
Sand	Environmental → Terrestrial → Soil → Sand	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.99%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%
Composting	Engineered → Solid Waste → Grass → Composting	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.99%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.99%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.99%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.97%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.99%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.99%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.99%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026894	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_02331350	2170459017	Switchgrass, Maize And Mischanthus Litter	MTKNAPAPDAMLALQTVAEASNEPSQICSLQDGTIFDDLSLLGALLFGEPIAEELIDEVAPERRH
2213873060	2209111006	Arabidopsis Rhizosphere	MTKNAPAAPDATLTLLAVAEASEAFSPQEGTIFDDLSLLGALLFGEPIAEALIDEVAPERRH
INPhiseqgaiiFebDRAFT_1005512842	3300000364	Soil	MTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPISEALIDEVAPERRH*
Ga0062591_1020284491	3300004643	Soil	MTKNAPDAPDATLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIAETLIDEVAPERRH*
Ga0066807_10134564	3300005161	Soil	ELQGRFNQPGLEGHFLDLETVTPLKEIAMTKNSSDAPDATLDLQTVAEASQTSSTQEGTIFDDLSLLGALLFGEPITEALIDEVAPDRRH*
Ga0066809_100459032	3300005168	Soil	MTKNSSDAPDATLALQTVAEASQTSSTQEGTIFDDLSLLGALLFGEPITEALIDEVAPDRRH*
Ga0066810_100097913	3300005169	Soil	MTKNSSDAPDATLDLQTVAEASQTSSTQEGTIFDDLSLLGALLFGEPITEALIDEVAPDRRH*
Ga0066388_1006915113	3300005332	Tropical Forest Soil	MIKNAPAAMDAPLTLLTVAEASETSSQQEVTIFDDLSLLGAMLFGEPIAQALIDEVAPERRH*
Ga0070675_1014190042	3300005354	Miscanthus Rhizosphere	MTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLAEALIDEGAP
Ga0070701_104509983	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLAEALIDEGAPERRH*
Ga0070694_1000389053	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLPEALIDEGAPERRH*
Ga0070678_1004765603	3300005456	Miscanthus Rhizosphere	MTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLAEALIDEGAPERRH*
Ga0068855_1011135331	3300005563	Corn Rhizosphere	EPELQGRFNQPGLKGCFFDLETVIPPKEIAMTKNAPDAPDATLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIAETLIDEVAPERRH*
Ga0068861_1002393063	3300005719	Switchgrass Rhizosphere	MTKNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEIPETLVDEVAPERRH*
Ga0068862_1016629002	3300005844	Switchgrass Rhizosphere	MTKNAPDAPDATLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIAETLIDEVAPERR
Ga0074050_119572531	3300006577	Soil	MTKNSSDAPDATLALQTVAEASQTSSTQEGTIFDDLSLLGALLFGEPITEALIDEVAPERRH*
Ga0074049_126683142	3300006580	Soil	MTKNSPDAPDATLALQTVAEASQTSSTQEGTIFDDLSLLGALLFGEPITEALIDEVAPDRRH*
Ga0075428_1004675003	3300006844	Populus Rhizosphere	MTKNAPEAPDATLGLLTVAEAPNEASQTCSQQGTIFDDLSLIGALLFGGEICEPLADEAEIERRH*
Ga0075425_1010969453	3300006854	Populus Rhizosphere	APDATLTLLAVAEASEAFSPQEGTIFDDLSLLGALLFGEPIAEALIDEVAPERRH*
Ga0111539_105789292	3300009094	Populus Rhizosphere	VEAAIPPKEIDMTKNAPEAPDATLGLLTVAEAPNEASQTCSQQGTIFDDLSLIGALLFGGEICEPLADEAEIERRH*
Ga0075418_130707672	3300009100	Populus Rhizosphere	MTKNAPAAPDATLTLLAVAEASEAFSPQEGTIFDDLSLLGALLFGEPIAEALIDEVAPERHRPLERCVDRA*
Ga0111538_130990242	3300009156	Populus Rhizosphere	MTKNAPEAPDATLGLLTVAEAPNEASQTCSQQGTIFDDLSLIGALLFGGEICEPLVDEAEIERRH*
Ga0111538_140257541	3300009156	Populus Rhizosphere	PAAPDATLTLLTVAEANEASSPQEGTIFDDLSLLGALLFGEPIAEALIDEVAPERRH*
Ga0105248_130912952	3300009177	Switchgrass Rhizosphere	MTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLAEALIDEGAPER
Ga0105237_109590263	3300009545	Corn Rhizosphere	QAASTRRPFPRLGIPTPLKEIAMTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLPEALIDEGAPERRH*
Ga0105249_104047743	3300009553	Switchgrass Rhizosphere	VIPPKEIAMTKNAPDAPDATLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIAETLIDEVAPERRH*
Ga0105249_104267472	3300009553	Switchgrass Rhizosphere	MTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLAEALIDEAAPERRH*
Ga0105249_128652101	3300009553	Switchgrass Rhizosphere	MTKNAAAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPIAEALIDEVALERQH*
Ga0105074_10943481	3300010029	Groundwater Sand	LLSSKPTPPKEIAMTKNAPAAQDAMLALQTVADASNEAGQAYSTQEGTVFDDLSLIGALLFGEPIAEALIDEVAPDRRH*
Ga0126380_100083593	3300010043	Tropical Forest Soil	MIKNAPAALDAPLTLLTVAEASETSSQQEVTIFDDLSLLGAMLFGEPIAQALIDEVAPERRH*
Ga0126382_101978792	3300010047	Tropical Forest Soil	MIKNAPAALDAPLTLLTVAEASETSSQQEVTIFDDLSLLGALLFGEPIAEALIDEVAPERRH*
Ga0126377_118449351	3300010362	Tropical Forest Soil	KEIAMIKNAPAALDAPLTLFTVAEASETSSQQEVTIFGDLSLLGALLFGEPIAEPLIDEVAPERRH*
Ga0134128_125186892	3300010373	Terrestrial Soil	LKEIAMTKNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEIPETLVDEVAPERRH*
Ga0105239_113684003	3300010375	Corn Rhizosphere	RTPLKEIAMTKNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEIPETLVDEVAPERRH*
Ga0134127_135863402	3300010399	Terrestrial Soil	LKEIAMTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLAEALIDEGAPERRH*
Ga0134122_103154662	3300010400	Terrestrial Soil	MTKNAPATPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLAEALIDEGAPERRH*
Ga0134123_103279913	3300010403	Terrestrial Soil	MTKNAPAAPDATLTLLTVAEASQTGSLQEGTIFDDLSLLGALLFGEPLAEALIDEGAPERRH*
Ga0157335_10045621	3300012492	Arabidopsis Rhizosphere	MTNDAPAAPDATLTLLTVAEANEASSPQEGTIFDDLSLLGALLFGEPIAEALIDEVAPERRH*
Ga0157355_10040013	3300012493	Unplanted Soil	VQAASTRRPFPRPGNRTPLKEIAMTKNAPAAPDATLTLLAVAEASEASSPQEGTIFDDLSLLGALLFGEPIAEALIDEVAPERRH*
Ga0157351_10504551	3300012501	Unplanted Soil	NRTPLKEIAMTKNAPAAPDATLTLLAVAEASEAFSPQEGTIFDDLSLLGALLFGEPIAEALIDEVAPERRH*
Ga0157291_103654761	3300012902	Soil	TLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIAETLIDEVAPERRH*
Ga0126375_103287741	3300012948	Tropical Forest Soil	MIKNAPAAMDAPLTLLTVAEASETSSQQEVTIFDDLSLLGALLFGEPIAEALIDEVAPERRH*
Ga0164303_110123541	3300012957	Soil	STRRPFPRPGNRTPLKEIAMTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLAEALIDEGAPERRH*
Ga0164299_109374892	3300012958	Soil	AVQAASTRRPFPRPGNRTPLKEIAMTKNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEIPETLVDEVAPERRH*
Ga0164309_112397852	3300012984	Soil	RPFPRPGNRTPLKEIAMTKNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEIPETLVDEVAPERRH*
Ga0164304_111196142	3300012986	Soil	RRPFPRPGNRTPLKEIAMTKNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEIPETLVDEVAPERRH*
Ga0164307_116157022	3300012987	Soil	FPRPGNRTPLKEIAMTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLAEALIDEGAPERRH*
Ga0164306_116209832	3300012988	Soil	MTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLSEALIDEGAPERRH*
Ga0163162_124439532	3300013306	Switchgrass Rhizosphere	VIPPKEIAMTKNAPDAPDATLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIA
Ga0157375_132784491	3300013308	Miscanthus Rhizosphere	PGNRTPLKEIAMTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLPEALIDEGAPERRH*
Ga0075320_10318102	3300014255	Natural And Restored Wetlands	MPLKEIAMIKNAPAPDAMLALQTVAEASNEPSQICSPQDGTIFDDLSLLGALLFGEPMPEALIEEVAPQRRH*
Ga0163163_131141551	3300014325	Switchgrass Rhizosphere	GCFFDLETVIPPKEIAMTKNAPDAPDATLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIAETLIDEVAPERRH*
Ga0157377_104733183	3300014745	Miscanthus Rhizosphere	CFFDLETVIPPKEIAMTKNAPDAPDATLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIAETLIDEVAPERRH*
Ga0157379_109106302	3300014968	Switchgrass Rhizosphere	MTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLAEAVIDEGAPERRH*
Ga0132255_1031089811	3300015374	Arabidopsis Rhizosphere	MPKNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGEPIAEALIDEVAPERRH*
Ga0184608_101177042	3300018028	Groundwater Sediment	MTKNAPDAQDATLTLLTVAEASNEASQTCSPQDGTIFDDLSLIGALLFGDAISATLVDEAELDRRH
Ga0184626_102757522	3300018053	Groundwater Sediment	MTKNAPAAQDATLALQTVADASNEAGQTFSTREGTIFDDLALVGALIFGDAISATLVDEVELDRRH
Ga0184621_102424512	3300018054	Groundwater Sediment	MTKNAPDAQDATLTLLTVAEASNEASQTSAPQEGTIFDDLSLLGALLFGEPITEALIDEVAPER
Ga0184609_100603133	3300018076	Groundwater Sediment	MTKNAPDAQDATLTLLTVAEASNEASQTSSPQEGTIFDDLSLLGALLFGEPITEALIDEVAPERRH
Ga0184612_101256152	3300018078	Groundwater Sediment	MTKNSSDAPDATLALQTVAEASQTSSTQEGTIFDDLSLLGALLFGEPITEALIDEVAPDRRH
Ga0190270_131087201	3300018469	Soil	QPPGLKGCFFDLETVIPPKEIAMTKNAPDAPDATLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIAETLIDEVAPERRH
Ga0190274_104875132	3300018476	Soil	MTKNAPDAPDATLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIAETLIDEVAPERRH
Ga0210381_104008041	3300021078	Groundwater Sediment	MTKNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEIPETLVDEVAPERRH
Ga0247746_10523603	3300022886	Soil	SRAVQPPGLKGCFFDLETVIPPKEIAMTKNAPDAPDATLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIAETLIDEVAPERRH
Ga0247796_11253412	3300023261	Soil	PKEIAMTKNAPDAPDATLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIAETLIDEVAPERRH
Ga0207671_109762652	3300025914	Corn Rhizosphere	LKEIAMTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLPEALIDEGAPERRH
Ga0207652_113837181	3300025921	Corn Rhizosphere	TKNAPDAPDATLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIAETLIDEVAPERRH
Ga0207712_101771573	3300025961	Switchgrass Rhizosphere	MTKNAPDAPAATLGLLTVAEASIETSQTGSPQGTIFDDLSLIGALLFGEPIAETLIDEVAPERRH
Ga0207678_106967771	3300026067	Corn Rhizosphere	MTTNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEIPETLVDEVAPERRH
Ga0207648_105699963	3300026089	Miscanthus Rhizosphere	MTKNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEIPET
Ga0207980_10067901	3300026894	Soil	MTKNSSDAPDATLDLQTVAEASQTSSTQEGTIFDDLSLLGALLFGEPITEALIDEVAPDRRH
Ga0209382_104729633	3300027909	Populus Rhizosphere	MTKNAPEAPDATLGLLTVAEAPNEASQTCSQQGTIFDDLSLIGALLFGGEICEPLADEAEIERRH
Ga0268265_108351012	3300028380	Switchgrass Rhizosphere	MTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLAEALIDEGAPERRH
Ga0268264_103094302	3300028381	Switchgrass Rhizosphere	MTKNAPAAPDATLTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGEPLAEALIDEAAPERRH
Ga0247823_105497633	3300028590	Soil	VRFNTPRLEGHFLDLQTVTPLKEIAMTKNSSDAPDATLALQTVAEASQTSSTQEGTIFDDLSLLGALFFGEPITEALIDEVAPDRRH
Ga0247822_105263672	3300028592	Soil	MTENSPDAPNATPALQTVAEASQTSSTQEGTIFDDLSLLGALFFGEPITEALIDEVAPDRRH
Ga0247820_104976401	3300028597	Soil	KNSSDAPDATLALQTVAEASQTSSTQEGTIFDDLSLLGALLFGEPITEALIDEVAPDRRH
Ga0307313_102329552	3300028715	Soil	TVAEASNEASQTCSPQDGTIFDDLSLIGALLFGDAISATLVDEAELDRRH
Ga0307504_102472002	3300028792	Soil	MTKNAPAAPDATLTLLTVAEASEAYSPQEGTIFDDLSLLGALLFGEPIAEMLIDEVAPERRH
Ga0247827_100348753	3300028889	Soil	EGHFLDLETVTPLKETAMTENSPDAPNATPALQTVAEASQTSSTQEGTIFDDLSLLGALFFGEPITEALIDEVAPDRRH
Ga0307498_101283901	3300031170	Soil	AAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEISETLVDEVAPERRH
Ga0307498_102530302	3300031170	Soil	MTKNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEIPETLVD
Ga0310886_103259962	3300031562	Soil	MTKNAPAAPDATLTLLTVAEANEASSPQEGTIFDDLSLLGALLFGEPIAEAQIDAVAPERRH
Ga0307469_100947861	3300031720	Hardwood Forest Soil	PELRGRFNQPGLEGHFLDLETVTPLKEIAMTKNSSDAPDATLALQTVAEASQTSSTQEGTIFDDLSLLGALLFGEPITEALIDEVAPDRRH
Ga0307473_103483723	3300031820	Hardwood Forest Soil	MTKNAPAAPDAALTLLTVAEASQTGSPQEGTIFDDLSLLGALLFGGEIPETLIDEVASERRH
Ga0307473_112712641	3300031820	Hardwood Forest Soil	MTKNSSDAPDATLALQTVAEATQEGTIFDDLSLLGALLFGEPITEALIDEVAPDRRH
Ga0310904_109126831	3300031854	Soil	MTNDAPAAPDATLTLLTVAEANEASSPQEGTIFDDLSLLGALLFGEPIAEAQIDAVAPERRH
Ga0310892_103108501	3300031858	Soil	MTKNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEIPETLV
Ga0310891_103043412	3300031913	Soil	MTKNAPAAPDATLTLLTVAEATEASSPQEGTIFDDLSLLGALLFGEPIAEALIDEVAPGRRH
Ga0310884_110036222	3300031944	Soil	MTKNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEISETLVDEVAPERRH
Ga0214473_101885872	3300031949	Soil	MTKNAPDAPDATLNLLTVAEASNELSQTCSPQGTIFDDLSLIGALLFGEPIAEALIDEVAPERRH
Ga0310903_104378792	3300032000	Soil	MTKNVPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEIPETLVDEVAPERRH
Ga0310889_105075312	3300032179	Soil	GNGTPLKEIAMTKNAPAAPDATLTLLTVAEASGASSPQERTIFDDLSLLGALLFGGEIPETLVDEVAPERRH
Ga0307471_1004953093	3300032180	Hardwood Forest Soil	MTKNAPATPDATLTLLTCTGSPQEGTIFDDLSLLGALLFGGEIPETLIDEVASERRH
Ga0307472_1007893662	3300032205	Hardwood Forest Soil	MTKNAPAAPDATLTLLTVAEASQTGFPQEGTIFDDLSLLGALLFGGEIPETLIDEVAPERRH
Ga0315273_109046873	3300032516	Sediment	MTTNAPDAPDATQSLLTVAEASNETSRTCAPHGTIFDDLSLIGALLFGEPIGEALIYEVAPERRH
Ga0326726_114774501	3300033433	Peat Soil	MTKNAPAAPDATLTLLTVAEASETSSPQEGTIFDDLSLLGALLFGEPIAEVLIDEVA
Ga0247829_100218173	3300033550	Soil	MTENSPDAPNATPALQTVAEASQTSSTQEGTIFDDLSLLGALLFGEPITEALIDEVAPDRRH
Ga0326723_0174260_19_207	3300034090	Peat Soil	MTKNAPAAPDAALTLLTVAEASETSSPQEGTIFDDLSLLGALLFGEPIAEVLIDEVAPERRH
Ga0326723_0588200_336_515	3300034090	Peat Soil	NAPAAPDATLTLLTVAEASESSSPQEGTIFDDLSLLGALLFGEPIAEALIDEVAPERRH
Ga0364931_0026317_1424_1615	3300034176	Sediment	MTKNAPAAQDATLALQTVADASNEVGQTFSTREGTIFDDLALVGALIFGDAISATLVDEVELD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103204

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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