NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F103192

Metagenome / Metatranscriptome Family F103192

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103192
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 111 residues
Representative Sequence MDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHEPAGQGVTAAEWLTQGQAVLRPRQVPARSPGEGAP
Number of Associated Samples 96
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 90.10 %
% of genes near scaffold ends (potentially truncated) 99.01 %
% of genes from short scaffolds (< 2000 bps) 89.11 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (51.485 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(23.762 % of family members)
Environment Ontology (ENVO) Unclassified
(27.723 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(39.604 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.41%    β-sheet: 0.00%    Coil/Unstructured: 52.59%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF00571CBS 45.54
PF00459Inositol_P 14.85
PF09860DUF2087 1.98
PF12323HTH_OrfB_IS605 0.99
PF00589Phage_integrase 0.99



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms51.49 %
UnclassifiedrootN/A48.51 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459012|GOYVCMS01DY11YNot Available516Open in IMG/M
3300005176|Ga0066679_10349947Not Available966Open in IMG/M
3300005177|Ga0066690_10737510Not Available648Open in IMG/M
3300005187|Ga0066675_11394100Not Available514Open in IMG/M
3300005331|Ga0070670_101588159Not Available601Open in IMG/M
3300005354|Ga0070675_100257823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1527Open in IMG/M
3300005367|Ga0070667_102314732Not Available506Open in IMG/M
3300005435|Ga0070714_101699360All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300005435|Ga0070714_101878908Not Available584Open in IMG/M
3300005438|Ga0070701_10051273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2141Open in IMG/M
3300005536|Ga0070697_102133288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f502Open in IMG/M
3300005548|Ga0070665_102072119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia alni574Open in IMG/M
3300005553|Ga0066695_10714888Not Available586Open in IMG/M
3300005598|Ga0066706_11203999Not Available575Open in IMG/M
3300005610|Ga0070763_10498745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia696Open in IMG/M
3300005843|Ga0068860_102140579All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300006028|Ga0070717_11132172Not Available713Open in IMG/M
3300006046|Ga0066652_101432796All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300006604|Ga0074060_11543118Not Available504Open in IMG/M
3300006755|Ga0079222_10993033Not Available720Open in IMG/M
3300006854|Ga0075425_100639971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1222Open in IMG/M
3300006903|Ga0075426_11227052Not Available569Open in IMG/M
3300006904|Ga0075424_100485955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1318Open in IMG/M
3300006904|Ga0075424_102199382All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300006954|Ga0079219_12222743Not Available529Open in IMG/M
3300009098|Ga0105245_11910730All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300009148|Ga0105243_10369141All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1323Open in IMG/M
3300009545|Ga0105237_11788585All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300009551|Ga0105238_12403010Not Available563Open in IMG/M
3300010154|Ga0127503_10777890All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300010359|Ga0126376_11207506Not Available771Open in IMG/M
3300010398|Ga0126383_12030462All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300010400|Ga0134122_10316302All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1346Open in IMG/M
3300010401|Ga0134121_10762192Not Available925Open in IMG/M
3300012199|Ga0137383_10175491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix obliqua1570Open in IMG/M
3300012210|Ga0137378_11852828Not Available506Open in IMG/M
3300012483|Ga0157337_1036062Not Available528Open in IMG/M
3300012924|Ga0137413_11038335All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300012930|Ga0137407_10033817All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4014Open in IMG/M
3300012960|Ga0164301_10117612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1563Open in IMG/M
3300012960|Ga0164301_11929613Not Available500Open in IMG/M
3300012989|Ga0164305_10950001Not Available727Open in IMG/M
3300013102|Ga0157371_11224931Not Available579Open in IMG/M
3300013297|Ga0157378_12944177Not Available528Open in IMG/M
3300014487|Ga0182000_10580364Not Available537Open in IMG/M
3300014745|Ga0157377_10218801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1218Open in IMG/M
3300014968|Ga0157379_11018601Not Available790Open in IMG/M
3300015374|Ga0132255_104377615All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300019362|Ga0173479_10324946Not Available712Open in IMG/M
3300021088|Ga0210404_10741349Not Available561Open in IMG/M
3300021180|Ga0210396_11696873Not Available513Open in IMG/M
3300021403|Ga0210397_11384987Not Available546Open in IMG/M
3300021420|Ga0210394_11823997Not Available506Open in IMG/M
3300021432|Ga0210384_10070567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3145Open in IMG/M
3300021560|Ga0126371_11895267All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300022533|Ga0242662_10284205Not Available547Open in IMG/M
3300022724|Ga0242665_10023954Not Available1437Open in IMG/M
3300024279|Ga0247692_1052797Not Available631Open in IMG/M
3300024288|Ga0179589_10122768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1084Open in IMG/M
3300024347|Ga0179591_1185260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2957Open in IMG/M
3300025911|Ga0207654_11119690Not Available574Open in IMG/M
3300025912|Ga0207707_10643282Not Available894Open in IMG/M
3300025922|Ga0207646_11001015All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300025928|Ga0207700_11270695All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300025929|Ga0207664_10505595Not Available1082Open in IMG/M
3300025929|Ga0207664_10815330Not Available839Open in IMG/M
3300025939|Ga0207665_11540340Not Available528Open in IMG/M
3300026550|Ga0209474_10494237All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300026899|Ga0209326_1001760Not Available1812Open in IMG/M
3300027765|Ga0209073_10040588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1490Open in IMG/M
3300027775|Ga0209177_10347245Not Available580Open in IMG/M
3300027903|Ga0209488_10127508Not Available1917Open in IMG/M
3300027903|Ga0209488_11236084Not Available501Open in IMG/M
3300028380|Ga0268265_10291735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1465Open in IMG/M
3300028807|Ga0307305_10053972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1850Open in IMG/M
3300031093|Ga0308197_10080840Not Available919Open in IMG/M
3300031544|Ga0318534_10240301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1045Open in IMG/M
3300031546|Ga0318538_10112452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1416Open in IMG/M
3300031549|Ga0318571_10049077All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1251Open in IMG/M
3300031564|Ga0318573_10632053All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300031720|Ga0307469_12473449Not Available507Open in IMG/M
3300031751|Ga0318494_10397629All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300031770|Ga0318521_10522637All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300031782|Ga0318552_10021103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2888Open in IMG/M
3300031796|Ga0318576_10029844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2246Open in IMG/M
3300031831|Ga0318564_10035137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2147Open in IMG/M
3300031835|Ga0318517_10515444Not Available538Open in IMG/M
3300031912|Ga0306921_10055243All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4519Open in IMG/M
3300031941|Ga0310912_11528106Not Available502Open in IMG/M
3300031954|Ga0306926_11664615All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300032009|Ga0318563_10006009All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae5464Open in IMG/M
3300032043|Ga0318556_10099253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1472Open in IMG/M
3300032054|Ga0318570_10038034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1947Open in IMG/M
3300032064|Ga0318510_10037771All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1655Open in IMG/M
3300032089|Ga0318525_10032118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2562Open in IMG/M
3300032180|Ga0307471_101604139Not Available807Open in IMG/M
3300032205|Ga0307472_100990768Not Available786Open in IMG/M
3300032898|Ga0335072_10966544Not Available787Open in IMG/M
3300032954|Ga0335083_10087792All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3110Open in IMG/M
3300033134|Ga0335073_10435112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1521Open in IMG/M
3300033806|Ga0314865_040994All Organisms → cellular organisms → Bacteria1184Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil23.76%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.96%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil3.96%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.97%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.97%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.98%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.99%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.99%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.99%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.99%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.99%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.99%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459012Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grassEnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012483Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610Host-AssociatedOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024279Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026899Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033806Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
N56_098091402170459012Grass SoilMDREGAETYLRLLAEAAMRGSLAPAVELRAPGASRMLAVGHALTAVGALDPATAEEILTDFRLAVSVRHLHSEPGQGPGQAVTVAQWLSQGRAVXHAKSPPGPSPA
Ga0066679_1034994713300005176SoilMDREGAETYLRLLAEAAMRGSLAPAAAPRAPNASTMMVVGHALTAVGALDPVTAEEILADFRLAVTVRHLHSEAGQGPGQALTAAQWLAQGRPVLRGKP
Ga0066690_1073751013300005177SoilMNREGAETYLRLLAEAAMRGSLAPAVAARAPNASTIMVVGHALTAVGALDPVTAEEILADFRLAVTVRHLHSEAGQGVTAAQWLAQGRPVLRGKPRPGPSPGEGTPGDATPGDATPGVGADRFVPVGLTV
Ga0066675_1139410023300005187SoilMDREGAETYLRLLAEAAMRGSLTPATAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVSVRQLHSEQGQGPGQAATVAQWLTQGRAVLGPKQRPARSQREGTPGTSGG
Ga0070670_10158815913300005331Switchgrass RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHEPAGQGVTAAEWLTQGQAVLRPRQVPARSPGEGAP
Ga0070675_10025782333300005354Miscanthus RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTTVGALDPVTAEEILTDFRLAVTVRQLGSEPGQAATVAHWLGQGRPVLRGKPRPAQSSGERAPGEEASGKWAPGED
Ga0070667_10231473213300005367Switchgrass RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVLRPRQVPARSPGEGAPWEDPDH
Ga0070714_10169936023300005435Agricultural SoilMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVLRPRQVPARSPGEGAPWE
Ga0070714_10187890813300005435Agricultural SoilMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTTVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVLRPRQVPARSPGEGAPWE
Ga0070701_1005127343300005438Corn, Switchgrass And Miscanthus RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAMTARQLHSEPDQALAVANWLAQPRGALRGKPRQPTGAGPPGEDAGPDGA
Ga0070697_10213328813300005536Corn, Switchgrass And Miscanthus RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAMTARQLHSEPDQALAVANWLAQPRGALRGKPRQPTRAGPPGEDAGPDGADRFVPVGLTVPFRA
Ga0070665_10207211913300005548Switchgrass RhizosphereMDREGAETYLRSLAEAAMRGSLTPAAAPRAPNASTIMASGHALTAVGALDPVTAEEILTDFRLAVTVRQLRGEPGQAATVAHWLGQGRAVLRGKPHPAQSSGERAPGEEASGKWAPGEDAEPDGADRF
Ga0066695_1071488823300005553SoilMDREGAETYLRLLAEAAMRGSLAPAVAARAPNASTIMVVGHALTAVGALDPVTAEEILADFRLAVTVRHLRGEPGQGGGQAVTAVQWLAQGRPVLRGKPRPAPSPGEGAPGEGTPEEGTSGDATPGNATAGDGAD
Ga0066706_1120399923300005598SoilMDREGAETYLRLLAEAAMRGSLAPAAEPLVPNESRIMVVGHALTAVGALDPVTAEEILTDFRLAVSLRQLHSEPGQGPGQAVTVAQWLTQGRAVLRPKQHPARSPGEGAPGAGTPGDDAADKDRADR
Ga0070763_1049874513300005610SoilMNREGAETYLRLLAEAAMRGSLAPAAAARAPNESTIMVVGHALTAVGALDPVTAEEILADFRLAVTVRHLHGEPGQGAGQAVTAAQWLAQGRPVLRGKPRPAPSPGEGAPGEGTPGEGTPGDSAGGDR
Ga0068860_10214057913300005843Switchgrass RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVLRPRQV
Ga0070717_1113217223300006028Corn, Switchgrass And Miscanthus RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAARAPNASTIMVVGHALTAVEALDPVTAEEILADFRLAVTVRHLHSEAGQGVTAAQWLAQGRPVLRGKPR
Ga0066652_10143279623300006046SoilMDREGAETYLRLLAEAAMRGSLAPAATPRAPNASTMMVVGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHEPAGQGVTPAEWLTQSQAVLRPKQAPARSPGEGTP
Ga0074060_1154311813300006604SoilMDREGAETYLRLLAEAALRRSLAPAAELRAPGASRILVVGHALTVVGALDPVTAEEILTDFRLAETVRWLHREPAVQGVTAAEWLTQGRAGLRP
Ga0079222_1099303313300006755Agricultural SoilMDREGAETYLRLLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHREPAGHGVTAAEWLSQGQAVL
Ga0075425_10063997113300006854Populus RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHEPAGQGVTAAEWLTQSQAVLRPKQAPARSPEEGTPGEDAGRGRADHGRAGRFVPVG
Ga0075426_1122705223300006903Populus RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHEPAGQGVTAAEWLTQGQAVLRPRQVPARSPGEEVPGLDPDHGRAGRFVPV
Ga0075424_10048595513300006904Populus RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLIQGQAVLRPRQVPARSP
Ga0075424_10219938223300006904Populus RhizosphereMDREGAETYLRLLAEAAMRGSLTPATAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHEPAGQGVTAAEWLTQGQAVLRPRQVPARSP
Ga0079219_1222274323300006954Agricultural SoilMDREGAETYLRLLAEAAMRGSPTPAARPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVLRP
Ga0105245_1191073013300009098Miscanthus RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVLRPRQVPARSPGEAAPWEDPDHGPADH
Ga0105243_1036914133300009148Miscanthus RhizosphereMDREGAETYLRSLAEAAMRGSLTPAATPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRRLGSEPGQAATVAHWLGQGRAVLRGK
Ga0105237_1178858523300009545Corn RhizosphereMDREGAETYLRSLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLRSEPGQAATVAHWLGQGRAVLRGK
Ga0105238_1240301023300009551Corn RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAGPRVPNASTIMAAGHALTTVGALDPVTAEEILTDFRLAETVRQLHHEPAGQGVTAAGWLGQSQVGLRPKQA
Ga0127503_1077789013300010154SoilMDREGAETYLRLLAEAAMRGSLSRVAEPGPPGASRMMVVGHALTAVGALDPAIAEEILTDFRLAVTVRQLRGEPGQAATVAHWLGQDRAVLRGKPRPAQSSGERAPGEEASGKWAP
Ga0126376_1120750613300010359Tropical Forest SoilMDREGAETYLRLLAEAAMRGSLTAATAPRTPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHEPAGQGVTAAEWLAQSQAVLRPRQAPARSPGEGW
Ga0126383_1203046213300010398Tropical Forest SoilMDREGAETHLRLLAEAAMRGSRTPAPEPWEPGASRMLVVGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHEPAGQGVTAAEWLTQSQAVLRPRQAPARSPGE
Ga0134122_1031630233300010400Terrestrial SoilMDREGAETYLRLLAEAAVRGSLAPTGERRAPGASRILVVGHALTVVGALDPVTAEEILTDFRLAETVRQLHHEPAGQGVTAGWLSQSQAGLRPRQAPARSPGDGTPGEDADHGRDDRFVPVGL
Ga0134121_1076219223300010401Terrestrial SoilMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVLRPRQVPARSPGEGAPWEDPDHGR
Ga0137383_1017549123300012199Vadose Zone SoilMDREGAETYLRLLAEAAMRGSSAPAAVPPAPNASTMMVVGHALTAVGALDPVTAEEILTDFRLAVSLRQLHSEPGQGSGQAVTVAQWLTQGRAVLRPKQRPAQSPGAGTPGDDAGQDPAGKDG
Ga0137378_1185282823300012210Vadose Zone SoilMDREGAETYLRLLAEAVMRGSLAPAAPRAPNASTILVVGHALTAVGALDPVTAEEILTDFRLAVSVRQLHSEPGQGPGQAVTVAQWLGQGRAVLRPKQAPARSPGEGTPGEDA
Ga0157337_103606213300012483Arabidopsis RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHQTAGQGVTAAEWLTQGQAVLRPRQVPARAPWEAAPGED
Ga0137413_1103833523300012924Vadose Zone SoilMDREGAETYLRLLAEAAMRGSLAPAAPRAPNASTILVAGHALTAVGALDPVTVEEILTDFRLAVTVRQLHSEPGQGPGQAVTVAQWLGQGRAALRPKPRPAQPPGTGTPGEGTPGEGTPGEGTPGEDAG
Ga0137407_1003381773300012930Vadose Zone SoilMDREGAETYLRLLAEAAMRGSLAPAAELRTPGASRILVVGHALTVVGALDPVTAEEILTDFRLAETVRQLHHEPAGQGVTAAGWLAQSRAGLRPKAPVRSPGEGTPGEDAD
Ga0164301_1011761233300012960SoilMDREGAETYLRLLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHEPAGQGVTAAEWLTQGQAVLRPRQVPARSPGAGTRGEDP
Ga0164301_1192961313300012960SoilMDREGAETYLRLLAEAAMRGSLTPAAARAPNASTIMVVGHALTAVEALDPVTAEEILADFRLAVTVRHLHSEAGQGVTAAQWLAQGRPVLRGKPRPSPSPGE
Ga0164305_1095000113300012989SoilMDREGAETYLRLLAEAAMRGSLTPAAAPRSPNASTIMAAGHALTAVGALDPVTAEEILTGFRLAETVRQLHSEPDQALAVANWLAQPRGALRGKPRQPTGAGPPGEDAGP
Ga0157371_1122493113300013102Corn RhizosphereMDREGAETYLRSLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRHLHSEAGQGVTAAQWLAQGRPVLRGKPRPAPSPGEETAGEGAPGNATPGEG
Ga0157378_1294417713300013297Miscanthus RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAMTARQLHSEPDQALAVANWLAQPRGALRGKPRQPTGAGRRK
Ga0182000_1058036413300014487SoilMDREGAETHLRLLAEAAMRGSLAPAVAPHAHNASTIMVVGHALTVVGALDPVTAEEILTDFRLAVSVRQLHSEQGQGPGQAVTVAQWLTQGRAVLGPKQRPARSQREGTPGTGGGRDQASRFVPVG
Ga0157377_1021880133300014745Miscanthus RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTTVGALDPVTAEEILTDFRLAETVRQLHHETAGQGVTAAGWLTQSRAGLRPKQA
Ga0157379_1101860113300014968Switchgrass RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVL
Ga0132255_10437761513300015374Arabidopsis RhizosphereMADTYDMDREGAETYLRLLAEAAMRGSLMPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHQTAGQGVTAAEWLTQGQAVLRPRQVPARAP
Ga0173479_1032494613300019362SoilMADTEDMDREGAETYLRLLAEAAMRGSLTPATAPRAPNASTIMAAGHALTAVGALDPVTAEEILADFRLAVTVRQLHHQPAGQGVTAAEWLTQSQAVLRPKQAPVRSPEGTPAEDADRGLADHAR
Ga0210404_1074134923300021088SoilMDREGAETYLRLLAEAAMRGPLAPAVEPLVPNESRIMVVGHALTAVGALDPVTAEEILTDFRLAVSVRQLHREPDPGSGQTVAVARWLSQGRAVPRGKPRLAQFSGAESSGDAR
Ga0210396_1169687313300021180SoilMDREGAETYLRLLAEAAMRGSLAPAVEPPAPGASRMLAVGHALTAVGALDPVVAEEILTDFRLAVSVRHLHSDPGQGPGQAVTVAQWLSQGRAVLH
Ga0210397_1138498713300021403SoilMDREGAETYLRLLAEAAMRGPLAPAVEPLVPNESRIMVVGHALTAVGALDPVTAEEILTDFRLAVSVRQLHREPDPGSGQTVAVARWLSQGRA
Ga0210394_1182399723300021420SoilMDREGAETYLRLLAEAAMRGSLAPAAARAPNASTIMVVGHALTSVGALDPVTAEEILTDFRLAVTVRHLHSEPGQGVGQVVTAAQWLAQGRPV
Ga0210384_1007056713300021432SoilMDREGAETYLRLLAEAAMRGPLAPAVEPLVPNESRIMVVGHALTAVGALDPVTAEEILTDFRLAVSVRQLHREPDPGSGQTVAVARWLSQGRAVPRGKPRPAQFSGAES
Ga0126371_1189526723300021560Tropical Forest SoilMDREGAETYLRLLAEAVLRGSLAAAPEPGPPGTSRMMLAGHALTAVGVLDPLVVEEILTDFRLAVTVRQLRSDPGLGPGQMVTAAQWISQGRAVP
Ga0242662_1028420513300022533SoilMDREGAETYLRLLAEAAMRGSLAPAVEPRAPGASRMLAVGHALTAVGALDPVIAEEILTDFRLAVSVRQLHSEPGPGPGQAVTVAQWLSQGRAVLHAKSPPAPPSML
Ga0242665_1002395443300022724SoilMDREGAETYLRLLAEAAMRGSLAPVVERRAPGASRMLAVGHALTAVGALDPVTAEEILTDFRLAVSVRHLRSEPGPGPGQAVTVAQWLSQGRAVLHAKSP
Ga0247692_105279713300024279SoilMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVLRPRQVPARSPGEGAPWEDPDHGRADHDRADRFVPV
Ga0179589_1012276833300024288Vadose Zone SoilMDREGAETYLRLLAEAAMRGSLAPAAPRAPNASTILVAGHALTAVGALDPVTVEEILTDFRLAVTVRQLHSEPGQGPGQAVTVAQWLGQGRAALRPQARPA
Ga0179591_118526033300024347Vadose Zone SoilMDREGAETYLRLLAEAAVRGSLARAGELRASGASRILVVGHALTVIGALDPVTAEEILTDFRLAETVRQLHHEPAGQGVTAAGWLSQSQAGLRPKQAPVRSPGEGTPGRTPTTGGTTGSSRSG
Ga0207654_1111969023300025911Corn RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVLRPRQVPARSPGEGAPWEDP
Ga0207707_1064328213300025912Corn RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVLRPRQVPARSPGEGAPWEDPDHGRADHDRADRFVP
Ga0207646_1100101523300025922Corn, Switchgrass And Miscanthus RhizosphereMDREGAETYLRLLAEAAMRGSLAPAAPWAPNASTILVAGHALTAVGALDPVTVEEILTDFRLAVTVRQLHSEPGQGPGRAVTVAQWLGQGRAALRPKPRPAQAPGTGSPGEGTPGEGTPGEGTPGEGTPG
Ga0207700_1127069513300025928Corn, Switchgrass And Miscanthus RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAAPRSPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAMTARQLHSEPDQALAVANWLAQPRGALRGKPRQPTGAGPPG
Ga0207664_1050559513300025929Agricultural SoilMDREGAETYLRLLAEAAMRGSLTPAAARAPNASTIMVVGHALTAVEALDPVTAEEILADFRLAVTVRHLHSEAGQGVTAAQWLAQGRPVLRGKPRPSPSPGEGTAGEGAPGNATPGEG
Ga0207664_1081533023300025929Agricultural SoilMDREGAETYLRLLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHEPAGQGVTAAEWLTQGQAVLRPRQVPARSPGEGAPGQDPDHGRAGRFV
Ga0207665_1154034013300025939Corn, Switchgrass And Miscanthus RhizosphereMDREGAETYLRLLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVEALDPVTAEEILTGFRLAETVRQLDHEPAGQGVTAAEWLTQGQAVLRPRQVPARSPREGTPG
Ga0209474_1049423723300026550SoilMDREGAETYLRLLAEAAMRGSLAPAAAPRAPNATTMMVVGHALTAVGALDPVTAEEILTDFRLAVSLRQLHSEPGQGPGQAVTVAQWLTQGRAVLRPKQHPARSPGEGAP
Ga0209326_100176013300026899Forest SoilMDREGAETYLRLLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHREPAGQGVTAAEWLSQGQAVLRPRQVPARSPGEGATGEDPDHGRPGRFVPVGLTVPFRAG
Ga0209073_1004058813300027765Agricultural SoilMDREGAETYLRLLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHEPAGQGVTAAEWLTQGQAVLRPRQVPARSPGEEVPGLDPDHGRAGRFVPVGLT
Ga0209177_1034724513300027775Agricultural SoilMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVLRPRQVPARSPGEAAPWEDP
Ga0209488_1012750813300027903Vadose Zone SoilMDREGAETYLRLLAEAAMRGSLTPAAARAPNASTIMVVGHALTAVGALDPVTAEEILAEFRLAVTVRHLHSEAGQGPGQAVTVAQWLAQGRPVLRGKPRPDPSPGEGTPGNATPGEGADRFVPVG
Ga0209488_1123608413300027903Vadose Zone SoilMDREGAETYLRLLAEAAMRGSLAPAAPRAPNASTILVAGHALTAVGALDPVTVEEILTDFRLAVTVRQLHSEPGQGPGQAVTVAQWLGQGRAALRPKPRPAQPPGTGTPGEGTPGED
Ga0268265_1029173513300028380Switchgrass RhizosphereMDREGAETYLRSLAEAAMRGSLTPAATPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVLRPRQVPARSPGEGAPWEDPDHGRTDYDR
Ga0307305_1005397213300028807SoilMDREGAETYLRSLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLRSEPGEGTGQAATVAHWLGQG
Ga0308197_1008084023300031093SoilMDREGAETYLRLLAEAAVRGSLAPARELRAPGASRILVVGHALTVVGALDPVTAEEILTDFRLAETVRQLHHEPAGQGVTAAGWLSQSQAGLRPKQAPVRSP
Ga0318534_1024030113300031544SoilMDREGAETYLRLLAEAAMRGSLAPAAGPGPPGASRMMVVGHALTAVGALDPVVAEEILADFRLAVTVRQLRGEPGQIPGQAGTAAQWIGQGRA
Ga0318538_1011245213300031546SoilMDREGAETHLRLLAEAAMRGSLTHTPEPWAPGASRMLVVGHALTAVGALDPVTAEEILTDFNLAVSVRKLHGEPDQGLGRAVTLARWLTQGRAVLHTESFEAGPPEDDAGQAR
Ga0318571_1004907733300031549SoilMDREGAETHLRLLAEAAMRGSLTHTPEPWAPGASRMLVVGHALTAVGALDPVTAEEILTDFNLAVSVRKLHGEPDQGLGRAVTLARWLTQGRAVLHTESFEAGPPEDDAG
Ga0318573_1063205313300031564SoilMDREGAETYLRLLAEAAMRGSLAPAAGPGPPGASRMMVVGHALTAVGALDPVVAEEILADFRLAVTVRQLRGEPGQIPGQAGTAAQWIGQG
Ga0307469_1247344923300031720Hardwood Forest SoilMDREGAETYLRLLAEAAMRGSLTPAAARAPNASTIMVVGHALTAVEALDPVTAEEILADFRLAVTVRHLHSEAGQGVTAAQWLAQGRPVLRGKPRPSPSPGEGTAGEGAPGNATPGEGAD
Ga0318494_1039762913300031751SoilMDREGAETYLRLLAEAAMRGSLAAAAEPRPPDASRLMVVGHALTAVGALDPVTAEEILTDFRLAVSVRQLHSNPGQGLGQVMPAAQWIGQGRAKPHR
Ga0318521_1052263713300031770SoilMDREGAETYLRLLAEAAMRGSLAPAAGPGPPGASRMMVVGHALTAVGALDPVVAEEILADFRLAVTVRQLPGEPGQIPGQAVTAVQWIGQGRAHPLRNPHPAPPPATAPSRS
Ga0318552_1002110353300031782SoilMDREGAETHLRLLAEAAMRGSLTHTPEPWAPGASRMLVVGHALTAVGALDPVTAEEILTDFNLAVSVRKLHGEPDQGLGRAVTLARWLTQGRAVLHTESFEAGPPEDDAGQARPR
Ga0318576_1002984453300031796SoilMDREGAETHLRLLAEAAMRGSLTHTPEPWAPGASRMLVVGHALTAVGALDPVTAEEILTDFNLAVSVRKLHGEPDQGLGRAVTLARWLTQGRAVLHTESFEAGPPEDDAGQA
Ga0318564_1003513743300031831SoilMDREGAETHLRLLAEAAMRGSLTHTPEPWAPGASRMLVVGHALTAVGALDPVTAEEILTDFNLAVSVRKLHGEPDQGLGRAVTLARWLTQGRAVLHTESFEAGPPEDDAGQARPGRFVPVGLTV
Ga0318517_1051544413300031835SoilMDREGAETHLRLLAEAAMRGSLTHTPEPWAPGASRMLVVGHALTAVGALDPVTAEEILTDFNLAVSVRKLHGEPDQGLGRAVTLARWLTQGRAVLHTESFEAGPPEDDAGQARPGRFVPVGLTVPF
Ga0306921_1005524313300031912SoilMDREGAETHLRLLAEAAMRGSLTHTPEPWAPGASRMLVVGHALTAVGALDPVTAEEILTDFNLAVSVRKLHGEPDQGLGRAVTLARWLTQGRAVLHTESFEAGPPEDD
Ga0310912_1152810613300031941SoilMDREGAETHLRLLAEAAMRGSLTHTPEPWAPGASRMLVVGHALTAVGALDPVTAEEILTDFNLAVSVRKLHGEPDQGLGRAVTLARWLTQGRAVLHTESFEAGPPEDDAGQARPGRFVPVGLTVPFRAGA
Ga0306926_1166461513300031954SoilMDREGAETYLRLLAEAAMRGSLAPAAGPGPPGASRMMVVGHALTAVGALDPVVAEEILADFRLAVTVRQLRGEPGQIPGQAGTAAQWIGQGRAHPLRNP
Ga0318563_1000600993300032009SoilMDREGAETHLRLLAEAAMRGSLTHTPEPWAPGASRMLVVGHALTAVGALDPVTAEEILTDFNLAVSVRKLHGEPDQGLGRAVTLARWLTQGRAVLHTESFEAGPPED
Ga0318556_1009925313300032043SoilMDREGAETHLRLLAEAAMRGSLTHTPEPWAPGASRMLVVGHALTAVGALDPVTAEEILTDFNLAVSVRKLHGEPDQGLGRAVTLARWLTQGRAVLH
Ga0318570_1003803443300032054SoilMDREGAETHLRLLAEAAMRGSLTHTPEPWAPGASRMLVVGHALTAVGALDPVTAEEILTDFNLAVSVRKLHGEPDQGLGRAVTLARWLTQGRAVL
Ga0318510_1003777133300032064SoilMDREGAETHLRLLAEAAMRGSLTHTPEPWAPGASRMLVVGHALTAVGALDPVTAEEILTDFNLAVSVRKLHGEPDQGLGRAVTLARWLTQGRAVLHTESFEAGPPEDDAGQARP
Ga0318525_1003211813300032089SoilMDREGAETHLRLLAEAAMRGSLTHTPEPWAPGASRMLVVGHALTAVGALDPVTAEEILTDFNLAVSVRKLHGEPDQGLGRAVTLARWLTQGRAVLHTDSFEAGPPEDDA
Ga0307471_10160413913300032180Hardwood Forest SoilMDREGAETYLRLLAEAAMRGSLTPAAGPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLATTARQLHHQSGGQGVTAAEWLTQGQAVLRPRQVPARPPGEGAPWEDPDHGRTDYDRADR
Ga0307472_10099076823300032205Hardwood Forest SoilMDREGAETYLRLLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHQSGGQGVTAAEWLTQGQAVLRPRQVPARSPGEGAPWEDP
Ga0335072_1096654423300032898SoilMDREGAETYLRSLAEAAMRGSLTPATAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHEPAGQGVTAAEWLTQSQAVLRPRQAPAPSPGEGTPGEDAGHDQAGRFVPVGLT
Ga0335083_1008779213300032954SoilMDREGAETYLRLLAEAAIRGSLTPAAESVPGTTRMMVAGHALTAVGALDPLVAEEILTDFRLAVSVRQLRGEPAPGPGQVLTGAQWIGQPRAVLH
Ga0335073_1043511213300033134SoilMDREGAETYLRLLAEAAMRGSLTPAAAPRAPNASTIMAAGHALTAVGALDPVTAEEILTDFRLAVTVRQLHHEPAGRGVTAAEWLTQGQAVLRPRQVPARSPGEGTPGEGPYHGRADR
Ga0314865_040994_2_4183300033806PeatlandMDREGAETYLRLLAEAAMRGSLAPAPELRAPGASRILVVGHALTAVGALDPVTVEEILTDFQLAVSVRQLYSDLGQAVTVTQWLSPGRAVPHGKPPASRPPGEGLPGEGLSGEGLSEDDAGERRPGRFVPVGLTVPFRA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.