Metagenome Family F103050

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103050
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	118 residues
Representative Sequence	MLLNEIFNNPIDDSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMRSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKSDLAHKVLDHERNPKEELDASPRTI
Number of Associated Samples	85
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	90.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (99.010 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (22.772 % of family members)
Environment Ontology (ENVO)	Unclassified (52.475 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.030 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.05% β-sheet: 1.77% Coil/Unstructured: 60.18%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF06941	NT5C	12.87
PF02675	AdoMet_dc	7.92
PF10431	ClpB_D2-small	4.95
PF11450	DUF3008	0.99
PF01556	DnaJ_C	0.99
PF01370	Epimerase	0.99
PF10518	TAT_signal	0.99
PF08245	Mur_ligase_M	0.99

Showing 1 to 8 of 8 entries

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COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	12.87
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	7.92
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	0.99

Phylogeny

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	0.99 %
Unclassified	root	N/A	99.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Viruses	superkingdom	All Organisms → Viruses	0.99 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	99.01 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005837\|Ga0078893_10016741	Not Available	14049	Open in IMG/M
3300005837\|Ga0078893_10073541	Not Available	7495	Open in IMG/M
3300006752\|Ga0098048_1000664	Not Available	16055	Open in IMG/M
3300012920\|Ga0160423_10010203	Not Available	7350	Open in IMG/M
3300012928\|Ga0163110_10003994	Not Available	7798	Open in IMG/M
3300020267\|Ga0211648_1000966	Not Available	9912	Open in IMG/M
3300020403\|Ga0211532_10003622	Not Available	11266	Open in IMG/M
3300020463\|Ga0211676_10039335	All Organisms → Viruses → Predicted Viral	3466	Open in IMG/M
3300025070\|Ga0208667_1000643	Not Available	14456	Open in IMG/M
3300025137\|Ga0209336_10000011	Not Available	110503	Open in IMG/M

Showing 1 to 10 of 10 entries

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Environmental Properties

Associated Habitat Types

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Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	26.73%
Inlet	Environmental → Aquatic → Marine → Inlet	0.99%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.95%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	3.96%
Oceanic	Environmental → Aquatic → Marine → Oceanic	27.72%
Strait	Environmental → Aquatic → Marine → Strait	7.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified	27.72%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.97%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.95%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.98%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	27.72%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	26.73%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	22.77%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	7.92%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.99%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.97%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.98%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.99%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	1.98%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.99%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	22.77%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	22.77%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.97%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.98%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.99%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.99%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.99%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	2.97%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.98%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.99%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.98%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	16.83%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	7.92%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	3.96%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000265	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_10	Environmental	Open in IMG/M
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental	Open in IMG/M
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M

Showing 1 to 10 of 85 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LP_A_09_P04_10DRAFT_10473692	3300000265	Marine	ITVITQDHVQRHVTGHVGSGNMLLNELFNKPVNDSLPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKIIQGLIMPLCDKALNHYCLKYDLNKVPSELMTKGDKSDLAHKVLDHERNPKEELPDAVKTTI*
OpTDRAFT_101610785	3300000928	Freshwater And Marine	VITQDHVQRHVTGHVGSGNMLLNELFNKPVNDSLPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKIIQGLIMPLCDKALNHYCLKYDLNKVPSELMTKGDKSDLAHKVLDHERNPKEELPDAVKTTI*
NpDRAFT_100747762	3300000929	Freshwater And Marine	KQDSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERNPKEELDAVKTTI*
JGI24003J15210_100600361	3300001460	Marine	MLLNEIFNNPLNDSMPFSVIDDVHFHMINDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELD
Ga0066605_102056532	3300004279	Marine	MLLREIFDMKQDSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERNPKEELDAVKTTI*
Ga0065861_11767711	3300004448	Marine	GHVGSGNMLLRELFDIQHDSMPFDVIDDVHFHMINDEIFYRKHYMPCMDKMKSETNEKVIQGYIMPLCDKALNDYCLKYDINQLPAELMTAQEKADLAHKVLDHERNPKEDLDATTRTF*
Ga0066222_11912093	3300004460	Marine	MLLRELFDIQHDSMPFDVIDDVHFHMINDEIFYRKHYMPCMDKMKSETNEKVIQGYIMPLCDKALNDYCLKYDINQLPAELMTAQEKADLAHKVLDHERNPKEDLDATTRTF*
Ga0066223_11858291	3300004461	Marine	EQDTTVIIQDRVLKHVIGHVGSGNMLLRELFDIQHDSMPFDVIDDVHFHMINDEIFYRKHYMPCMDKMKSETNEKVIQGYIMPLCDKALNDYCLKYDINQLPAELMTAQEKADLAHKVLDHERNPKEDLDATTRTF*
Ga0078893_1001674121	3300005837	Marine Surface Water	MLLNEIFNNPIDDSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMRSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKSDLAHKVLDHERNPKEELDASPRTI*
Ga0078893_100735414	3300005837	Marine Surface Water	VTTQVREQKLDTGHVGNGKMLLNEIFNNPLEDSMPYNVADDVHYHMLNDEGFYRKYYMPCMDKIRSEHNEKVIQGHVMPMINKCLNHYCIKYDLNKTPEELMNPQEKADLANKVIDHERNPKEELPDAIKTTI*
Ga0078893_102389072	3300005837	Marine Surface Water	MLLKEIFNQSIDEMPYDVQGDVHFHMLNDEGFYRKYYMPCMDKMRSEKNEKVIQGHVLPMIDKCLNHYCLKYDIDKTPEELMSKSERAELANKVIDHERNPKEELDASTRNI*
Ga0070743_100339542	3300005941	Estuarine	MLLNELFNKPVNDSLPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKIIQGLIMPLCDKALNHYCLKYDLNKVPSELMTKGDKSDLAHKVLDHERNPKEELPDAVKTTI*
Ga0098048_100066411	3300006752	Marine	MLLREIFDMKQDSMPFNVIDDVHFHMINDEEFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMTAQEKADLAHMVLDHERNPKEELDASQRTI*
Ga0098054_10919861	3300006789	Marine	MLLREIFDMKQDSMPFNVIDDVHFHMINDEEFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI*
Ga0102824_10823252	3300007681	Estuarine	GNNMLLREIFDMKQDSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERNPKEELDAVKTTI*
Ga0102814_103541472	3300009079	Estuarine	MLLNELFNKPVNDSLPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKIIRGLIMPLCDKALNHYCLKYDLNKVPSELMTKGDKSDLAHKVLDHERNPKEELPDALKTTI*
Ga0102815_100475751	3300009080	Estuarine	DSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERNPKEELDAVKTTI*
Ga0114995_100662345	3300009172	Marine	GSGNMLLRELFDIQHDSMPFDVIDDVHFHMINDEIFYRKHYMPCMDKMKSETNEKVIQGYIMPLCDKALNHYCLKYDINQLPAELMTAQEKADLAHKVLDHERNPKEDLDATTRTF*
Ga0114995_100663974	3300009172	Marine	MMIREIFSRQQPEETPYDVAGDVHFHMLNDEGFYRKHYMPCMDKIKSDYNEKVIQGHVMPMIDKCLNHYCNKYNINKLPKDLMNDQEKADLMRKVIDNERNPQEGLDATQISI*
Ga0114995_101586454	3300009172	Marine	MMIREIFSRQQPEETPYDVGSDLHFHMLNDEGFYRKHYMPCMDKIKSANNEKIIQGHVMPMIDKCLNHYCNKYDINKLPKDLMTNQEKADLMSKVMDNERNPQEADLDAAKKFI*
Ga0114994_101235914	3300009420	Marine	MIREIFSRQQPEETPYDVGSDLHFHMLNDEGFYRKHYMPCMDKIKSANNEKIIQGHVMPMIDKCLNHYCNKYDINKLPKDLMTNQEKADLMSKVMDNERNPQEADLDAAKKFI*
Ga0114994_110902882	3300009420	Marine	MLLRELFDIQHDSMPFDVIDDVHFHMINDEIFYRKHYMPCMDKMKSETNEKVIQGYIMPLCDKALNHYCLKYDINQLPAELMTAQEKADLAHKVLDHERNPKEDLDATT
Ga0114998_100306052	3300009422	Marine	MLLRELFDIQHDSMPFDVIDDVHFHMINDEIFYRKHYMPCMDKMKSETNEKVIQGYIMPLCDKALNHYCLKYDINQLPAELMTAQEKADLAHKVLDHERNPKEDLDATTRTF*
Ga0115008_101414722	3300009436	Marine	MLLTELFNNPINDSLPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDLNKVPSELMTNGDKSDLAHKVLDHERNPKEELPDAIKTTI*
Ga0115008_102299153	3300009436	Marine	MPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDINKMPAELMNAQEKSDLVHKVLDHERNPKEELDASPRTI*
Ga0115003_100856325	3300009512	Marine	VRALEQDTTVIIQDRVLKHVIGHVGSGNMLLRELFDIQHDSMPFDVIDDVHFHMINDEIFYRKHYMPCMDKMKSETNEKVIQGYIMPLCDKALNHYCLKYDINQLPAELMTAQEKADLAHKVLDHERNPKEDLDATTRTF*
Ga0129348_10603073	3300010296	Freshwater To Marine Saline Gradient	IQVHVLKHVTGHVGNGKMLLNEIFNNPIDDSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMRSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKSDLAHKVLDHERNPKEELDASPRTI*
Ga0151677_10568384	3300011258	Marine	MLLNEIFNNPIDDSMPFNVIDDVHFHMFNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKSDLAHMVLDHERNPKEELDASQRTI*
Ga0160423_100102032	3300012920	Surface Seawater	MLLKEIFSNPLNDSMPYNVIDDVHFHMLNDEGFYRKHYMPCMDKIRSEHNEKVIQGHVMPMINKCLNHYCIKYNINKTPEELMNPQEKADLAHKVLDHERNPKEELPDATKTTI*
Ga0163110_100039942	3300012928	Surface Seawater	MLLTEIFSKPLDDSMPYNVVDDVHFHMLNDEPFYRKHYMPCMDKLRSETNEKIIQGHVMPMIDKCLNHYCLKYDLNKTPEELMNPQEKADLAHKVLDHERNPKEELPDATKTAI*
Ga0163110_108206571	3300012928	Surface Seawater	MLLKEIFSNPIDDSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKLRSETNEKIIQGHIMPLCDKALNHYCLKYDINKLPEELMTAQEKSDLAHKVLD
Ga0163111_1000162512	3300012954	Surface Seawater	MLLKEIFSNPIDDSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKLRSETNEKIIQGHIMPLCDKALNHYCLKYDINKLPEELMTAQEKSDLAHKVLDHERNPKEELDASPRNI*
Ga0181369_10011614	3300017708	Marine	MLLNEIFNNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELPDAVKTTI
Ga0181401_10595501	3300017727	Seawater	LKSLILKDVRALEPDTTVIIQDHVQKHVTGHVGSGNMLLNEIFNNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0181402_10652652	3300017743	Seawater	LEQDTTVTIQDHVQKHVTGHVGSGNMLLNEIFNNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0181389_10574621	3300017746	Seawater	RALGQDITVIIQDHVLKHVTGHVGSGNMLLNEIFNNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0181400_10541272	3300017752	Seawater	MLLNEIFNNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELSDVAKTNI
Ga0181420_12134372	3300017757	Seawater	LGQDITVIIQDHVQKHVTGHVGSGNMLLNEIFNNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0181410_10051085	3300017763	Seawater	VIIQDHVQKHVTGHVGSGNMLLNEIFNNPLNDSMPFSVIDDVHFHMINDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0181425_10339022	3300017771	Seawater	MLLNEIFNNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLYHERNQKKELDASQRTI
Ga0181424_100234543	3300017786	Seawater	VIIQDHVQKHVTGHVGSGNMLLNEIFNNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0181563_101970942	3300018420	Salt Marsh	MLLTEIFNNPLNDSMPYNVADDVHFHMLNDEPFYRHHYMPCMDKIRSEHNEKVIQGHLMPMIDKCLNHYCLKYNLDKTPEELMNPQERADLANKVLDHERNPKEELPDATKTTI
Ga0211526_10076742	3300020264	Marine	VITQGQEQKQDIGLVGSGKMLLTEIFNNPLNDSMPYNVVDDVHFHMLNDEPFYRKHYMPCMDKLRSETNEKIIQGHVMPMIDKCLNHYCLKYDLNKTPEELLNPQEKADLAHKVLDHERNPKEELPDATKTTI
Ga0211519_10244173	3300020266	Marine	VTTQVREQKLDTGHVGNGKMLLNEIFNNPLEDSMPYNVADDVHFHMLNDEGFYRKYYMPCMDKIRSEHNEKVIQGHVMPMIDKCLNHYCIKYDLNKTPEDLMNPQEKADLANKVLDHERNPKEELPDAIKTTI
Ga0211648_10009664	3300020267	Marine	VITQGQEQKQDIGLAGSGKMLLTEIFSKPLDDSMPYNVVDDVHFHMLNDEPFYRKHYMPCMDKLRSETNEKIIQGHVMPMIDKCLNHYCLKYDLNKTPEELMNPQEKADLAHKVLDHERNPKEELPDATKTAI
Ga0211658_10426742	3300020274	Marine	MLLKEIFSNPIDDSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKLRSETNEKIIQGHIMPLCDKALNHYCLKYDINKLPEELMTAQEKSDLAHKVLDHERNPKEELDASPRNI
Ga0211508_11290481	3300020337	Marine	TGHVGNGKMLLNEIFNNPLEDSMPYNVADDVHFHMLNDEGFYRKYYMPCMDKIRSEHNEKVIQGHVMPMIDKCLNHYCIKYDLNKTPEDLMNPQEKADLANKVLDHERNPKEELPDAIKTTI
Ga0211505_11240512	3300020352	Marine	MLLREIFDMKQDSMPFNVIDDVHFHMINDEEFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDINKMPAELMNAQEKSDLAHKVLDHERNPKEELPDAVKTTI
Ga0211647_100613053	3300020377	Marine	VITQGQEQKQDIGLAGSGKMLLTEIFSKPLDDSMPYNVVDDVHFHMLNDEPFYRKHYMPCMDKLRSETNEKIIQGHVMPMIDKCLNHYCLKYDLNKTPEELMNPQEKADLAHKVLDHER
Ga0211647_100853251	3300020377	Marine	VIIQDLEQKLDTGHVGSGRMLLKEIFSNPLNDSMPYNVIDDVHFHMLNDEGFYRKHYMPCMDKIRSEHNEKVIQGHVMPMINKCLNHYCIKYNINKTPEELMNPQEKADLAHKVLDHER
Ga0211652_100146761	3300020379	Marine	QDIIVITQDQEQKHVTGHVGSGSMLLKEIFSNPIDDSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKLRSETNEKIIQGHIMPLCDKALNHYCLKYDINKLPEELMTAQEKSDLAHKVLDHERNPKEELDASPRNI
Ga0211677_102026151	3300020385	Marine	MLLREIFDMKQDSMPFNVIDDVHFHMINDEEFYRKHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERNPKKELPDAVKTTI
Ga0211666_100339631	3300020392	Marine	VLDTTVITQGQEQKQDIGLAGSGKMLLTEIFSKPLDDSMPYNVVDDVHFHMLNDEPFYRKHYMPCMDKLRSETNEKIIQGHVMPMIDKCLNHYCLKYDLNKTPEELMNPQEKADLAHKVLDHERNPKEELPDATKTAI
Ga0211532_1000362211	3300020403	Marine	MLLTEIFNNPLNDSMPYNVADDVHFHMLNDEPFYRHHYMPCMDKIRSEHNEKVIQGHLMPMIDKCLNHYCLKYNLDKTPDELMNPQERADLANKVLDHERNPKEELPDATKTTI
Ga0211659_1000199912	3300020404	Marine	MLLTEIFSKPLDDSMPYNVVDDVHFHMLNDEPFYRKHYMPCMDKLRSETNEKIIQGHVMPMIDKCLNHYCLKYDLNKTPEELMNPQEKADLAHKVLDHERNPKEELPDATKTAIXR
Ga0211659_100590051	3300020404	Marine	VLEQDIIVITQDQEQKHVTGHVGSGSMLLKEIFSNPIDDSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKLRSETNEKIIQGHIMPLCDKALNHYCLKYDINKLPEELMTAQEKSDLAHKVLDHERNPKEELDASPRNI
Ga0211659_100814134	3300020404	Marine	VIIQDLEQKLDTGHVGSGRMLLKEIFSNPLNDSMPYNVIDDVHFHMLNDEGFYRKHYMPCMDKIRSEHNEKVIQGHVMPMINKCLNHYCIKYNINKTPEELMNPQEKADLAHKVL
Ga0211651_101666683	3300020408	Marine	VTIQDLEQKLDTGHVGSGRMLLKEIFSNPLNDSMPYNVIDDVHFHMLNDEGFYRKHYMPCMDKIRSEHNEKVIQGHVMPMINKCLNHYCIKYNINKTPEELMNPQEKADLAHKVLDHER
Ga0211653_100496771	3300020421	Marine	QERVLEQDIIVITQDQEQKHVTGHVGSGSMLLKEIFSNPIDDSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKLRSETNEKIIQGHIMPLCDKALNHYCLKYDINKLPEELMTAQEKSDLAHKVLDHERNPKEELDASPRNI
Ga0211576_100370583	3300020438	Marine	MLLNELFNKPVNDSLPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKIIQGLIMPLCDKALNHYCLKYDLNKVPSELMTKGDKSDLAHKVLDHERNPKEELPDAVKTTI
Ga0211576_105777582	3300020438	Marine	MLLREIFDVKQDSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERNPKKELPDAVKTTI
Ga0211574_100115531	3300020446	Marine	KEIFSNPLNDSMPYNVIDDVHFHMLNDEGFYRKHYMPCMDKIRSEHNEKVIQGHVMPMINKCLNHYCIKYNINKTPEELMNPQEKADLAHKVLDHERNPKEELPDATKTTIXSXR
Ga0211676_100393352	3300020463	Marine	VITQDQEQKHVTGHVGSGSMLLKEIFSNPIDDSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMRSETNEKIIQGHIMPLCDKALNHYCLKYDINKLPEELMTAQEKSDLAHKVLDHERNPKEELDASPRNI
Ga0211577_102617442	3300020469	Marine	VTIQDHVQKHVTGHVGSGNMLLNEIFNNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0213867_10219503	3300021335	Seawater	MLLNEIFNNPIDDSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMRSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKSDLAHKVLDHERNPKEELDASPRTI
Ga0213867_10802922	3300021335	Seawater	MLLNEIFNNPVNDSLPFNVIDDVHYHMINDEGFYRKHYMPCMDKMKSETNEKIIQGLIMPLCDKALNHYCMKYDLNKTPSELMTKSDKSDLAHKVLDHERNPKEELPDAIKTTIXR
Ga0213862_100381223	3300021347	Seawater	MLLNEIFNNPVNDSLPFNVIDDVHYHMINDEGFYRKHYMPCMDKMKSETNEKIIQGLIMPLCDKALNHYCMKYDLNKTPSELMTKSDKSDLAHKVLDHERNPKEELPDAIKTTI
Ga0213863_101321512	3300021371	Seawater	DSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMRSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKSDLAHKVLDHERNPKEELDASPRTI
Ga0222719_100847762	3300021964	Estuarine Water	MLLNEIFNNPVNDSMPFNVIDDVHYHMINDEGFYRKHYMPCMDKMKSETNEKIIQGLIMPLCDKALNHYCMKYDLNKTPSELMTKSDKSDLAHKVLDHERNPKEELPDAIKTTI
Ga0255752_102527941	3300022929	Salt Marsh	MLLTEIFNNPLNDSMPYNVADDVHFHMLNDEPFYRHHYMPCMDKIRSEHNEKVIQGHLMPMIDKCLNHYCLKYNLDKTPEELMNPQERADLANKVLDHERN
Ga0228603_10345602	3300024183	Seawater	YNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERNPKEELDASQRTI
Ga0228636_10671072	3300024191	Seawater	MLLREIFDMKQDSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERNPKEELDASQRTI
Ga0228637_10575762	3300024192	Seawater	MLLREIFDVKQDSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERNPKEELDASQRTI
Ga0228665_10840002	3300024235	Seawater	LKSLILQDARALGQDITVIIQDHVQKHVTGHVGSGNMLLNEIFNNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0228665_10912802	3300024235	Seawater	MLLREIFDVKQDSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERNPKEE
Ga0228623_10531342	3300024267	Seawater	MLLNELFNNPVNDSLPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKIIQGLIMPLCDKALNHYCLKYDLNKVPSELMTKGDKSDLAHKVLDHERNPKEELPDAVKTTI
Ga0228629_10498182	3300024296	Seawater	MLLNEIFNNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0228656_10446051	3300024322	Seawater	MLLREIFDVKQDSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERN
Ga0244775_100273774	3300024346	Estuarine	MLLREIFDMKQDSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERNPKEELDAVKTTI
Ga0233396_11455882	3300024428	Seawater	NNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0208667_100064315	3300025070	Marine	MLLREIFDMKQDSMPFNVIDDVHFHMINDEEFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0209535_10728252	3300025120	Marine	MLLNEIFNNPLNDSMPFSVIDDVHFHMINDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0209336_1000001166	3300025137	Marine	MLLREIFDMKQDSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERNPKEELDASPRTI
Ga0208425_10829911	3300025803	Aqueous	HVTGHVGNGSMLLNEIFNNPIDDSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMRSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKSDLAHKVLDHERNPKEELDASPRTI
Ga0209630_101029692	3300025892	Pelagic Marine	MLLNEIFNNPIDDSMPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMRSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKSDLAHMVLDHERNPKEELDASQRTI
Ga0209425_101094232	3300025897	Pelagic Marine	MLLREIFDMKQDSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDINKMPAELMNAQEKSDLVHKVLDHERNPKEELDASPRTI
Ga0228641_10998911	3300026491	Seawater	LEPDTTVIIQDHVLKHVTGHVGSGNMLLNEIFNNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0209710_10307435	3300027687	Marine	MLLRELFDIQHDSMPFDVIDDVHFHMINDEIFYRKHYMPCMDKMKSETNEKVIQGYIMPLCDKALNHYCLKYDINQLPAELMTAQEKADLAHKVLDHERNPKEDLDATTRTF
Ga0209710_12300542	3300027687	Marine	VSADQIVSIVIVIIRTRQINDMMIREIFSRQQPEETPYDVAGDVHFHMLNDEGFYRKHYMPCMDKIKSDYNEKVIQGHVMPMIDKCLNHYCNKYNINKLPKDLMNDQEKADLMRKVIDNERNPQEGLDATQISI
Ga0209192_100360684	3300027752	Marine	MMIREIFSRQQPEETPYDVGSDLHFHMLNDEGFYRKHYMPCMDKIKSANNEKIIQGHVMPMIDKCLNHYCNKYDINKLPKDLMTNQEKADLMSKVMDNERNPQEADLDAAKKFI
Ga0209192_101508642	3300027752	Marine	MMIREIFSRQQPEETPYDVAGDVHFHMLNDEGFYRKHYMPCMDKIKSDYNEKVIQGHVMPMIDKCLNHYCNKYNINKLPKDLMNDQEKADLMRKVIDNERNPQEGLDATQISI
Ga0209711_100176414	3300027788	Marine	MLRTRQINDMMIREIFSRQQPEETPYDVGSDLHFHMLNDEGFYRKHYMPCMDKIKSANNEKIIQGHVMPMIDKCLNHYCNKYDINKLPKDLMTNQEKADLMSKVMDNERNPQEADLDAAKKFI
Ga0209092_100614704	3300027833	Marine	MLLTELFNNPINDSLPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDLNKVPSELMTNGDKSDLAHKVLDHERNPKEELPDAIKTTI
Ga0209092_104182162	3300027833	Marine	MLLRELFDIQHDSMPFDVIDDVHFHMINDEIFYRKHYMPCMDKMKSETNEKVIQGYIMPLCDKALNDYCLKYDINQLPAELMTAQEKADLAHKVLDHERNPKEDLDATTRTF
Ga0228674_11693481	3300028008	Seawater	LQDVRALEPDTTVIIQDHVQKHVTGHVGSGNMLLNEIFNNPLNDSMPFSVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKVIQGHIMPLCDKALNHYCLKYDLNKLPEELMNAQEKADLAHMVLDHERNPKEELDASQRTI
Ga0228642_10033238	3300028131	Seawater	MLLREIFDVKQDSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVL
Ga0257114_10309202	3300028196	Marine	MLLREIFDVKQDSMPYNVIDDVHFHMINDEGFYRQHYMPCMDKMKSETNEKVIQGLIMPLCDKALNHYCLKYDVNKMPAELMNAQEKSDLVHKVLDHERNPKEELDAVKTTI
Ga0228625_10752291	3300028419	Seawater	MLLNELFNKPVNDSLPFNVIDDVHFHMLNDEGFYRKHYMPCMDKMKSETNEKIIQGLIMPLCDKALNHYCLKYDLNKVPSELMTKGDKSDLAHKVLDHERNPKEELPDAVK
Ga0307489_106822961	3300031569	Sackhole Brine	LKRIIQKDVRALEQDTTVIIQDRVLKHVIGHVGSGNMLLRELFDIQHDSMPFDVIDDVHFHMINDEIFYRKHYMPCMDKMKSETNEKVIQGYIMPLCDKALNHYCLKYDINQLPAELMTAQEKADLAHKVLDHERNPKEDLDATTRTF
Ga0307996_10050864	3300031589	Marine	MMIREIFSRQQPEETPYDVGSDVHFHMLNDEGFYRKHYMPCMDKIKSANNEKIIQGHVMPMIDKCLNHYCNKYDINKLPKDLMTNQEKADLMSKVMDNERNPQEADLDAAKKFI
Ga0307998_100254212	3300031702	Marine	MIREIFSRQQPEETPYDVGSDVHFHMLNDEGFYRKHYMPCMDKIKSANNEKIIQGHVMPMIDKCLNHYCNKYDINKLPKDLMTNQEKADLMSKVMDNERNPQEADLDAAKKFI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103050

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences