Metagenome / Metatranscriptome Family F102931

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102931
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	110 residues
Representative Sequence	VINHNRTYSAVLTTLAVLAALSSGLLLFLAGASAGGALETHLPDWSLPWVAVINFAYAVAIIVTLCARRFEPQAGRRLTRFLNWALLPAAPGGTIVGIYGLLRADK
Number of Associated Samples	81
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	49.50 %
% of genes near scaffold ends (potentially truncated)	31.68 %
% of genes from short scaffolds (< 2000 bps)	80.20 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.040 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere (9.901 % of family members)
Environment Ontology (ENVO)	Unclassified (41.584 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.465 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.16% β-sheet: 0.00% Coil/Unstructured: 32.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00004	AAA	9.90
PF14559	TPR_19	8.91
PF04402	SIMPL	5.94
PF13414	TPR_11	1.98
PF00437	T2SSE	1.98
PF07394	DUF1501	0.99
PF10990	DUF2809	0.99
PF01906	YbjQ_1	0.99
PF02706	Wzz	0.99
PF17131	LolA_like	0.99
PF13145	Rotamase_2	0.99
PF00144	Beta-lactamase	0.99
PF04140	ICMT	0.99
PF13333	rve_2	0.99
PF13429	TPR_15	0.99
PF13302	Acetyltransf_3	0.99
PF00535	Glycos_transf_2	0.99
PF02633	Creatininase	0.99
PF00899	ThiF	0.99
PF07859	Abhydrolase_3	0.99
PF08281	Sigma70_r4_2	0.99
PF13489	Methyltransf_23	0.99
PF00072	Response_reg	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	5.94
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	5.94
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	5.94
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.99
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.99
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.99
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.99
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.99
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.99
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	0.99
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	0.99
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	0.99
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.04 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.97 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	81.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.94 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	2.97 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	80.20 %
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	2.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	68.32 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	8.91 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	2.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.99 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.32 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	8.91 %
Trebouxiophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae	2.97 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.99 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.99 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.32 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	8.91 %
Prasiolales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Prasiolales	2.97 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.99 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.32 %
Geminisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera	8.91 %
Stichococcaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Prasiolales → Stichococcaceae	2.97 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.99 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.32 %
Geminisphaera colitermitum	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera → Geminisphaera colitermitum	7.92 %
Diplosphaera	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Prasiolales → Stichococcaceae → Diplosphaera	2.97 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.99 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
Unclassified	root	N/A	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003279\|FCL3draft_1001425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	23207	Open in IMG/M
3300004799\|Ga0058863_11890325	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300004803\|Ga0058862_12072374	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005180\|Ga0066685_10000305	All Organisms → cellular organisms → Bacteria	15837	Open in IMG/M
3300005260\|Ga0074072_1006189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera → Geminisphaera colitermitum	5929	Open in IMG/M
3300005327\|Ga0070658_11716801	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300005329\|Ga0070683_100810815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	897	Open in IMG/M
3300005341\|Ga0070691_10882497	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005436\|Ga0070713_101294864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	706	Open in IMG/M
3300005446\|Ga0066686_10518636	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300005451\|Ga0066681_10331838	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	933	Open in IMG/M
3300005458\|Ga0070681_10031010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera → Geminisphaera colitermitum	5367	Open in IMG/M
3300005526\|Ga0073909_10511239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300005530\|Ga0070679_100502368	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300005530\|Ga0070679_102188763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300005535\|Ga0070684_101937987	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005535\|Ga0070684_102120623	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300005540\|Ga0066697_10526465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	667	Open in IMG/M
3300005563\|Ga0068855_100096551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera → Geminisphaera colitermitum	3404	Open in IMG/M
3300005563\|Ga0068855_100149563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera → Geminisphaera colitermitum	2655	Open in IMG/M
3300005563\|Ga0068855_100994322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	882	Open in IMG/M
3300005577\|Ga0068857_100402566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1274	Open in IMG/M
3300005578\|Ga0068854_100227578	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1478	Open in IMG/M
3300005617\|Ga0068859_100068885	All Organisms → cellular organisms → Bacteria	3573	Open in IMG/M
3300005618\|Ga0068864_100827460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	911	Open in IMG/M
3300005764\|Ga0066903_100110066	All Organisms → cellular organisms → Bacteria	3773	Open in IMG/M
3300005764\|Ga0066903_100691147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1795	Open in IMG/M
3300005842\|Ga0068858_100218568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1804	Open in IMG/M
3300006796\|Ga0066665_10196877	All Organisms → cellular organisms → Bacteria → Proteobacteria	1561	Open in IMG/M
3300009012\|Ga0066710_100322948	All Organisms → cellular organisms → Bacteria → Proteobacteria	2271	Open in IMG/M
3300009093\|Ga0105240_10151136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera → Geminisphaera colitermitum	2765	Open in IMG/M
3300009093\|Ga0105240_10342996	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1696	Open in IMG/M
3300009093\|Ga0105240_10897054	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	954	Open in IMG/M
3300009137\|Ga0066709_102273697	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300009176\|Ga0105242_10569717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1089	Open in IMG/M
3300009176\|Ga0105242_11736063	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300009177\|Ga0105248_12060776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300009545\|Ga0105237_11348200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300010048\|Ga0126373_10305759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1587	Open in IMG/M
3300010329\|Ga0134111_10444916	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300010343\|Ga0074044_10549489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	754	Open in IMG/M
3300010371\|Ga0134125_10102879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera → Geminisphaera colitermitum	3180	Open in IMG/M
3300010371\|Ga0134125_11240585	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Prasiolales → Stichococcaceae → Diplosphaera	814	Open in IMG/M
3300010371\|Ga0134125_12789701	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300010392\|Ga0118731_105830062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300010883\|Ga0133547_10182847	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	4494	Open in IMG/M
3300011434\|Ga0137464_1119460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	784	Open in IMG/M
3300011443\|Ga0137457_1123484	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	842	Open in IMG/M
3300012285\|Ga0137370_10735270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300012469\|Ga0150984_106992010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	595	Open in IMG/M
3300012975\|Ga0134110_10152544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	955	Open in IMG/M
3300013104\|Ga0157370_11144815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	703	Open in IMG/M
3300013296\|Ga0157374_10810172	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Prasiolales → Stichococcaceae → Diplosphaera	952	Open in IMG/M
3300013296\|Ga0157374_11114998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	810	Open in IMG/M
3300013297\|Ga0157378_10209512	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Prasiolales → Stichococcaceae → Diplosphaera	1848	Open in IMG/M
3300013307\|Ga0157372_11352411	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	821	Open in IMG/M
3300013307\|Ga0157372_12331668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	615	Open in IMG/M
3300013307\|Ga0157372_13394106	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300014968\|Ga0157379_10535970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1088	Open in IMG/M
3300017974\|Ga0187777_10614302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	767	Open in IMG/M
3300018084\|Ga0184629_10461755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	665	Open in IMG/M
3300018431\|Ga0066655_11363501	Not Available	513	Open in IMG/M
3300020021\|Ga0193726_1370414	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300021420\|Ga0210394_10646150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	929	Open in IMG/M
3300025909\|Ga0207705_10755043	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	756	Open in IMG/M
3300025912\|Ga0207707_10065535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3164	Open in IMG/M
3300025912\|Ga0207707_11090822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300025913\|Ga0207695_10032829	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5674	Open in IMG/M
3300025913\|Ga0207695_10063667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3801	Open in IMG/M
3300025913\|Ga0207695_10224065	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera	1787	Open in IMG/M
3300025921\|Ga0207652_10967850	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	749	Open in IMG/M
3300025924\|Ga0207694_10214029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1570	Open in IMG/M
3300025934\|Ga0207686_11600978	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300025944\|Ga0207661_10611259	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1001	Open in IMG/M
3300025949\|Ga0207667_10123820	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2663	Open in IMG/M
3300026035\|Ga0207703_10844284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	876	Open in IMG/M
3300026041\|Ga0207639_10357818	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1305	Open in IMG/M
3300026078\|Ga0207702_11973987	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300026116\|Ga0207674_10478961	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1203	Open in IMG/M
3300026296\|Ga0209235_1121868	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1092	Open in IMG/M
3300026538\|Ga0209056_10002721	All Organisms → cellular organisms → Bacteria	18904	Open in IMG/M
3300028573\|Ga0265334_10008372	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera → Geminisphaera colitermitum	4399	Open in IMG/M
3300028599\|Ga0265309_11025832	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300028800\|Ga0265338_10072767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2933	Open in IMG/M
3300028800\|Ga0265338_10298281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera → Geminisphaera colitermitum	1172	Open in IMG/M
3300030521\|Ga0307511_10203562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1023	Open in IMG/M
3300030619\|Ga0268386_10296933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1171	Open in IMG/M
3300031057\|Ga0170834_109282901	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300031231\|Ga0170824_104441019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	695	Open in IMG/M
3300031231\|Ga0170824_110736390	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300031231\|Ga0170824_119296853	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300031231\|Ga0170824_120428871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300031232\|Ga0302323_101318042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	809	Open in IMG/M
3300031446\|Ga0170820_11337369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	786	Open in IMG/M
3300031474\|Ga0170818_109602215	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300031941\|Ga0310912_10734662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	764	Open in IMG/M
3300032035\|Ga0310911_10446404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	749	Open in IMG/M
3300032132\|Ga0315336_1247906	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300032205\|Ga0307472_101172221	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300032783\|Ga0335079_10408997	All Organisms → cellular organisms → Bacteria → Proteobacteria	1461	Open in IMG/M
3300032828\|Ga0335080_10109041	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3072	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.43%
Host-Associated	Host-Associated	41.58%
Engineered	Engineered	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.50%
Plants	Host-Associated → Plants	39.60%
Aquatic	Environmental → Aquatic	6.93%
Human	Host-Associated → Human	1.98%
Bioreactor	Engineered → Bioreactor	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.87%
Marine	Environmental → Aquatic → Marine	3.96%
Sediment	Environmental → Aquatic → Sediment	2.97%
Digestive System	Host-Associated → Human → Digestive System	1.98%
Peat	Environmental → Terrestrial → Peat	0.99%
Roots	Host-Associated → Plants → Roots	0.99%
Unclassified	Engineered → Bioreactor → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.80%
Loam	Environmental → Terrestrial → Soil → Loam	13.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.97%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.98%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.99%
Coastal	Environmental → Aquatic → Marine → Coastal	0.99%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.99%
Subtidal Zone	Environmental → Aquatic → Marine → Subtidal Zone	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.99%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.98%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.98%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.99%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.99%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.99%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment	0.99%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.99%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	9.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	8.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	7.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.97%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.98%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.99%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	0.99%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.99%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment	0.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.99%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.99%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.99%
Down-Flow Hanging Sponge Reactor	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Down-Flow Hanging Sponge Reactor	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003279	Down-flow hanging sponge reactor microbial communities from the University of Illinois at Urbana-Champaign, USA - U3-798FC-DHS	Engineered	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005260	Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028599	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032132	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FCL3draft_100142518	3300003279	Down-Flow Hanging Sponge Reactor	MINHNRTYSAALAVLAVLALLSSGLLLFLAGVSAGGAVNTHLPEWSLPWVAIINCAYGLAIIVTLCARRFRPETGRVLTRALNWALLPAMPGGTVVGLYGLLRADRESR*
Ga0058863_118903252	3300004799	Host-Associated	MIDHNKIYSAALATLGVVATLSAGLLLFLTGLSLGGSVNTHLPDASLPWVAAINFGYVIAIVVVLCARQFKPESGKRLTRLLNWALLPALPGGTVVGIYGLLKADSISGARMKIE*
Ga0058862_120723741	3300004803	Host-Associated	TLGVTAALSAGLLLFLSGLSLGGSVNTHLPDSSLPWVAAINFGYVIAIVVVLCARQFKPESGKRLTRLLNWALLPALPGGTVVGIYGLLKADSISGARMKIE*
Ga0066685_100003055	3300005180	Soil	MINHNRIYPWVLAVLAVVAALSSALLFFLAHATAEGSLGIKLPAEWSLPWAAAINLLYAVAITIVLCARRFKPESGRSLTRLLNWALIPALPGGTIVGIYGLWTQRASDHAA*
Ga0074072_10061896	3300005260	Soil	MINHNRMYSTALASLGIMAALSAGLLLFLTGVSMSGPANTHLPDSSLPWVATINFGYAIAILIVLCARQFNSQSGPRLTRLLNWALLPAMPGGTVVGLYGLLKADKASRPRP*
Ga0070658_117168011	3300005327	Corn Rhizosphere	MIDHNRIYSSALVTLGGMAALSAGLLSFLAGVSMGGSVNTHLPDSSLPWIAAINFGYVIAIVVVLCARQLKPESGKRLTRVLNWALLPALPGGTIVGIYGLLNADRISGARMKSE*
Ga0070683_1008108153	3300005329	Corn Rhizosphere	HEMKNHNRMYSAALSILGVFAALSSGLLLFLAGASVGGTVDTHLPNWSLPWIAIVNFAYAVAIIVTLCARRFRPETGRTLTRILNWALLPALPGGTAVGFYGLLRADRDGN*
Ga0070691_108824971	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MIDHNKIYSAALATLGVVATLSAGLLLFLTGLSLGGSVNTHLPDASLPWVAAINFGYVIAIVVVLCARQFKPESGKRLTRLLNWALLPALPGG
Ga0070713_1012948641	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MINHDRMYSAALATVSATAVTSSGLLLFLAGASTAGSLQTHLPSWSFPWVAAVNFAYAVAIIIVLCARKFRPESGRRLTRVLNWALLPALPGGTVVGVYGLWKATGKQ*
Ga0066686_105186362	3300005446	Soil	MINHNRIYPWVLAVLAVVAALSSALLFFLAHATAEGSLGIKLPAEWSLPWAAAINLLYAVAITIVLCARRFKPESGRSLTRLLN
Ga0066681_103318382	3300005451	Soil	MINHNRIYPWVLAVLAVVAALSSALLFFLAHATAEGSLGIKLPAEWSLPWAAAINLVYAVAITLVLCARRFKPESGPSLTRLLNWALIPALPGGTIVGIYGLWTQRAGDHAA*
Ga0070681_100310106	3300005458	Corn Rhizosphere	MINHNKIYSGALATLCILAATSAGLLLFLTGVSASGSTNTHLPDSSLPWVAAVNFGYFIAILVVLCARYFNAASAPRSTRRLNWALLPALLGGTIVGLYG
Ga0073909_105112391	3300005526	Surface Soil	MKNHSRVYSAALAVLGVAAALGAGLLLYLAGASTGGAVHTHLPDWSLPWVAIINFAYAIAIIVTLCARQFKPETGRVLTRVLNWALLPAVPGGTVVGLYGLWRADKTNR*
Ga0070679_1005023683	3300005530	Corn Rhizosphere	MINHNRTYSTVLATLAMTAALSCGLLLYLAGASAGGVVHTHLPDWSLTWVAVINFAYAVAITVTLCARSFKPEAGRRLTRVLNWALLPALPGGTVVGIYGLMRVDK*
Ga0070679_1021887631	3300005530	Corn Rhizosphere	TYSMALGVLGVFAAVSAGLLLFLAGASAGGAVETHLPGWSLPWVAIINFAYAIAIVVTLSARQFRPETGRVFTRVLNWALLPAVPGGTVVGIYGLLRADRAKR*
Ga0070684_1019379871	3300005535	Corn Rhizosphere	MIDHNKIYSAALATLGVVATLSAGLLLFLTGLSLGGSVNTHLPDASLPWVAAINFGYVIAIVVVLCARQFKPESGKRLTRLLNWALLPALPGGTVVGIYGLLKA
Ga0070684_1021206231	3300005535	Corn Rhizosphere	MINHNRTYSTVLATLAMTAALSCGLLLYLAGASAGGAVHTHLPDWSLTWVAVINFAYAVAITVTLCARSFKPEAGRRLTRVLNWALLPALPGGTVVGIYGLMRVDK*
Ga0066697_105264652	3300005540	Soil	MINHNRIYPWVLAVLAVVAALSSALLFFLAHATAEGSLGIKLPAEWSLPWAAAINLLYAVAITIVLCVRRFKPESGRILTRLLNWALIPALPGGTIVGIYGLWTQRASDHAA*
Ga0068855_1000965512	3300005563	Corn Rhizosphere	MINHNKLYSGALETLGVLATISSGLLLFLTGASAGGSVNTHLPDASLPWIAAINFGYVIAILVVLCARRFKAESAQRLTRLLNWALLPALPGGTIVGIYGVIKADSIGARTNTE*
Ga0068855_1001495632	3300005563	Corn Rhizosphere	MINHNKIYSVALATLGVLAVCSSGLVLFLTGASAGGSVNTHLPDASLPWVAAINFGYFVAILFVLCARGFQAESARRLTRILNWALLPALPGGTVVGLYGLLKAEKISGTRGIKIE*
Ga0068855_1009943222	3300005563	Corn Rhizosphere	VINHNRTYSAVLTTLAVLAALSSGLLLFLAGASAGGALETHLPDWSLPWVAVINFAYAVAIIVTLCARRFEPQAGRRLTRFLNWALLPAAPGGTIVGIYGLLRADKQGH*
Ga0068857_1004025662	3300005577	Corn Rhizosphere	MINHNKIYSVALATLGVLAVCSSGLVLFLTGASAGGSVHTHLPDASLPWVAAINFGYFVAILFVLCARGFQAESARRLTRILNWALLPALPGGTVVGLYGLLKAEKISGARRIKIE*
Ga0068854_1002275782	3300005578	Corn Rhizosphere	MINHNKIYSVALATLGVLAVCSSGLVLFLTGASAGGSVNTHLPDASLPWVAAINFGYFVAILFVLCARGFQAESARRLTRILNWALLPALPGGTVVGLYGLLKAEKISGARRIKIE*
Ga0068859_1000688852	3300005617	Switchgrass Rhizosphere	MINHNRMYSAALAVLGMLAALSSGLLLFLAGASTGGAVHTHLPDWALPWVAIINFAYAIAIIVTLCARRFRPETGRVLTRVLNWPLLPALPGGTVVGLYGLLRADKKIGDHAA*
Ga0068864_1008274601	3300005618	Switchgrass Rhizosphere	MINHNRTYSAALTTLAVMAALSSGLLLYLAGASAGGALNVHLPDWSLPWAAVINFGYAIAIIITLCARQFKPDAGRRLTRLLNWALLPALPGGTVVGLYGLLRADKSGTGAAAA*
Ga0066903_1001100665	3300005764	Tropical Forest Soil	MKNHNRTYSAALAVLGVFASLSSGLLLFLAGVSTAGVVDTHLPDWSLPWVAIINFAYAIAIIVTLCARRLKPEAGRVLTRALNWALLPAVPGGTVVGLYGLFRADKENQ*
Ga0066903_1006911472	3300005764	Tropical Forest Soil	MKNHNRMYLAVLAVLGVLAALSSGLLLFLAGASAARAVRTHLPDRSLPWVAMINFAYAIAIVVTLCARWFKPETGRVLTRALNWVLLPAVPGGTVVGLYGLLMADRESQ*
Ga0068858_1002185682	3300005842	Switchgrass Rhizosphere	MINHNRMYSAALAVLGMLAALSSGLLLFLAGASTGGAVHTHLPDWALPWVAIINFAYAIAIIVTLCARRFRPETGRVLTRVLNWALLPALPGGTVVGLYGLLRADKKIGDHAA*
Ga0066665_101968771	3300006796	Soil	MINHNRIYPWVLEVLAVVAALSSALLFFLAHATAEGSLGIKLPAEWSLPWAAAINLLYAVAITIVLCVRRFKPESGLILTRLLNWALIPSLPGGTIVGIYG
Ga0066710_1003229482	3300009012	Grasslands Soil	MINHNRIYPWVLAVLAVVAALSSALLFFLAHATAEGSLGIKLPAEWSLPWAAAINLLYAVAITIVLCVRRFKPESGRILTRLLNWALIPALPGGTIVGIYGLWTQRASDHAA
Ga0105240_101511364	3300009093	Corn Rhizosphere	MINHNKMYSAALAALGFIAICSSGLLLFLAGLSAGGSVHTHLPNASLPWVAAINFGYFVAILFVLCARAFKAESAERLTRFLNWALLPALPGGTVVGLYGLLRADKSGARGMKIK*
Ga0105240_103429962	3300009093	Corn Rhizosphere	MINHNKIYSVALATLGVLAVCSSGLVLFLTGASAGGSVNTHLPDASLPWIAAINFGYFVAILFVLCARGFQAESARRLTRILNWALLPALPGGTVVGLYGLLKAEKISGARRIKIE*
Ga0105240_108970542	3300009093	Corn Rhizosphere	MINHNRLYSAALATLGVIAALGAGLLLFLTGVSASGSVNTHLPDSSLPSVAAINFGYFIAIVVVLCARQWQPEYGRRLTRLLNWALLPALPGGTVVGI
Ga0066709_1022736971	3300009137	Grasslands Soil	MINHNRIYPWVLEVLAVVAALSSALLFFLAHATAEGSLGIKLPAEWSLPWAAAINLLYAVAITIVLCVRRFKPESGRILTRLLNWALIPALPGGTIVGIYGLWTQRASDHAA*
Ga0105242_105697171	3300009176	Miscanthus Rhizosphere	MKHNQMYSVALAVLGVLAALSSGLLLFLAGVSTAGAVGTHFPDRSLAWAAVINFAYTVAIIITLYARRFRPGTGRVLTRVLNWALLPALPGGTVVGLYGLLRADRENR*
Ga0105242_117360632	3300009176	Miscanthus Rhizosphere	MINHNRMYSIALTTVGCIAACSAGLLLVLTGASLSGSVNTHLPDSLLPWVAAINFGYAVAIVVVLCARRCKAESAPRLTRLLNWALLPALPAGTVVGIYGLMEADKGRECAL*
Ga0105248_120607762	3300009177	Switchgrass Rhizosphere	MQINHNRTYSAVLATLAIVSATSAGLLLFLAGASAGGVLHTNLPDWSLPWVALINFAYAVAITVTLCARRFQPDAGRRLTRLLNLALLPALPGGTVVGIYGLLKADKQPNR*
Ga0105237_113482002	3300009545	Corn Rhizosphere	MINHNKIYSVALATLGVLAVCSSGLVLFLTGASAGGSVNTHLPDASLPWVAAINFGYFVAILFVLCARGFQAESARRLTRILNWALLPALPGGTVVGLYGLLKAEKISG
Ga0126373_103057592	3300010048	Tropical Forest Soil	MKTHDRIYSAALAVLGVMAALGSGLLLFLAGAATGGAVHTHLPDWSLPWVAVINFAYAIAILITLCARRFKPETGRVLSRILNWALLPAVPGGTVVGLFGLLRADRKGS*
Ga0134111_104449161	3300010329	Grasslands Soil	LAHATAEGSLGIRLPAEWSLPWAAAINLLYAVAITIVLCARRFKPESGRSLTRLLNWALIPALPGGTIVGIYGLWTQRASDHAA*
Ga0074044_105494892	3300010343	Bog Forest Soil	MIKHDRIYSGLLATLAVVAALGSGLLLFLAGASAEGAFHTHLPDWSLPCVAVINFAYAVAIVVVLCARRFKPESGRKLTRLLNWALLPALPGGTVVGVYGLLSVDKGGSREQAAYQFAGADTD*
Ga0134125_101028794	3300010371	Terrestrial Soil	MINHNKLYSGALETLGVMATISSGLLLFLTGASAGGSVNTHLPDASLPWIAAINFGYVIAILVVLCARRFKAESAQRLTRLLNWALLPALPGGTVVGIYGLLNADRISGARTKTE*
Ga0134125_112405852	3300010371	Terrestrial Soil	MIDHNRMYSAALATLGGLAALSVGLLLFLTGVSMSGSVNTHLPDSSLPWIAAINFGYVIAIVVVFCARRFKPASGKRLTRLLNWALLPALPGGTVVGIYGLLKADSISGARIKIE*
Ga0134125_127897012	3300010371	Terrestrial Soil	MINHNKVYSAALATLGLMAALSAGMLLFLTGVSASGSINSNLPDSSLPWVAAINFGYFIAILVVLCARQWQPESGRRLTRLLNWALLPALPGGTVVGIYGLLKADRFRDRGMKTE*
Ga0118731_1058300621	3300010392	Marine	MNHNRTYAAALAVLAGFAALSSGVLLFLAGASTGGAVDTHLPVWSLPWVAIINFAYVVAIIVTLCARRLRPATGRTLTRVLNWALLPAVPG
Ga0133547_101828472	3300010883	Marine	MKNHNQTYSAALVVLAVISTLSSGLLLFLAGASAGGTVNTYLPAWSLPWVAIINFAYAISIIVTLCARRFRPETGRTLSRVLNWALLPALPGGTVVGLYGLLKADRQSPKD*
Ga0137464_11194602	3300011434	Soil	MINHNRTYSAVLTTLGAMAVLSSGLLLYLAGAAAGGAIDAHLPDWSLPWVAIVNFVYAVGIVVTLCARRFKPDAGRRLTRILNWALLPALPGGTLVGIYGLLRVDKATA*
Ga0137457_11234842	3300011443	Soil	MINHNRTYSAVLTTLGAMAVLSSGLLLYLAGAAAGGAIDAHLPDWSLPWVAIVNFVYAVGIVVTLCARRFKPDAGRRLTRILNWALLLALPGGTLVGIYGLLRVDKAASE*
Ga0137370_107352701	3300012285	Vadose Zone Soil	MINHNRIYPWVLAILAVVAALSSALLFFLAHATTEGSLGIKLPAEWSLPWAAAINLLYAVAITIVLCARRFKPESGRSLTRLLNWALIPALPGGTIVGIYGLWTQRASDHAA*
Ga0150984_1069920102	3300012469	Avena Fatua Rhizosphere	SAALVALAAMAALSSGLLVFLAGVSMSGAVTTHLPAWSLPWVAIINFVYAVAIIVVLCARKFRPELGRRLTWFLNLALLPAIPGGTVVGVYGLCKADKEYRRSRLD*
Ga0134110_101525442	3300012975	Grasslands Soil	MINHNRIYPWVLAVLAVVAALSSALLFFLAHATAEGSLGIKLPAEWSLPWAAAINLLYAVAITIVLCARRFKPESGRSLTRLLPNDPRCPATAAT*
Ga0157370_111448152	3300013104	Corn Rhizosphere	AALAAMAAISSGFLLFLTGVSLSGALNTHLPDSSLPWIAAINFSYVIAILIVLCARWFKAESAQRLTRLLNWALLPALPGGTIVGIYGVIKADSIGARTNTE*
Ga0157374_108101722	3300013296	Miscanthus Rhizosphere	MIDHNKMYSAALALLGGLAAISVALLLFLTGLSASGSVNTHLPDFSLPWVAAINFGYLIAILVVLCARQFKADSAKRLTRLLNWALLPALPGGTVVGVYGLLKADKVSGARR*
Ga0157374_111149982	3300013296	Miscanthus Rhizosphere	MMNHNRTYSAVLAILAMVAALSCGLLLYLAGASAGGVVHTHLPDWSLTWVAVANFAYAIAITVTLCARSFKPEAGRRLTRVLNWALLPALPGGTVVGIYGLMKVDK*
Ga0157378_102095121	3300013297	Miscanthus Rhizosphere	GYRHERVKLEKHTMINHNKMYLSALVALGGLAALSSGMLLFLSGLSAGGSLHTHLPDSSLPWIAAINFGYALAIVVVLCARWFRPESGKHLTRLLNWALLPALPGGTIVGIYGLLKADKTSGAPGMKIK*
Ga0157372_113524111	3300013307	Corn Rhizosphere	MINHNKMYSAALAALAAMAAISSGLLLFLTGVSLSGAVNTHLPDSSLPWIAAINFSYVIAILIVLCARWFKAESAQRLTRLLNWALLPALPGGTIVGIYGVIKADSIGARTNTE*
Ga0157372_123316682	3300013307	Corn Rhizosphere	VQARVKRGRKSRVRELPLPGQITNNIRKYNMKNHNRTYLVALGVLGALAALSAGLLLFLAGASAGGVVETHLPTWSLPWVAIINFAYAIAIVVTLCARQFRPETGRVSTRVLNWALLPAVPGGTVVGLYGLLRADRENR*
Ga0157372_133941062	3300013307	Corn Rhizosphere	MINHNKIYSVALATLGVLAVCSSGLVLFLTGASAGGSVNTHLPDASLPWVAAINFGYFVAILFVLCARGFQAESARRLTRILNWALLPALPGGTVVGLYGLLKAEKISGARGIKIE*
Ga0157379_105359702	3300014968	Switchgrass Rhizosphere	MIDHNRAYAAGLATLAGMAAISAGVLLYLAGASAGGVVDLHLPEWSLPWVAVINFAYAVAIIVTLCARRLQPETGRRLTRLLNWALLPAVPGGTVVGLYGLLRADKGDDNDSSIRSTTPER*
Ga0187777_106143022	3300017974	Tropical Peatland	MWNHNRIYSAALAVLGVFAALSSGLLLFLAGASAGGALHTHLPGWSLPWVAIVNFAYAVAITVTLCARRLKPETGRTLTRVLNWALLPAFPGGTVVGLYGLLTADNGSQ
Ga0184629_104617551	3300018084	Groundwater Sediment	MINHNRTYSLVLTTLAVVAVLSSGLLLFLAGASAGGALHTHLPDWSLPGVAMINFTYAVAIIVTLCARRLKPELGQRLTRHLNWALLPALPGGTVVGIYGLLRADKERTISQTA
Ga0066655_113635011	3300018431	Grasslands Soil	MINHNRIYPWVLAVLAVVAALSSALLFFLAHATAEGSLGIKLPAEWSLPWAAAINLLYAVAITIVLCARRFKPESGRSLTRLLNWALIPALPGGTIVGIYGLWTQRASDHAA
Ga0193726_13704141	3300020021	Soil	MINHNRTYSAVLATLAMTAALSCGLLLFLAGVSAGGSVHTHVPDWSLPWVALVNFAYAVAITITLCARHFEPEVGRRLTRVLNWALLPALPGGTVVGIY
Ga0210394_106461502	3300021420	Soil	MINHNRIYSGVLATLALLSILSAGLLLFLARASTGGSSAISLPEWSLPWVAVVNLAYAVAIIVVLCARRFTPKSGRSLTRLLNWALLPALPGGTVVGIYGLWRVDKQERQ
Ga0207705_107550431	3300025909	Corn Rhizosphere	MIDHNRIYSSALVTLGGMAALSAGLLSFLAGVSMGGSVNTHLPDSSLPWIAAINFGYVIAIVVVLCARQFKPESGKRLTRLLNWALLPALPGGTVVGIYGLLKADSISGARMKIE
Ga0207707_100655352	3300025912	Corn Rhizosphere	MINHNKIYSGALATLCILAATSAGLLLFLTGVSASGSTNTHLPDSSLPWVAAVNFGYFIAILVVLCARYFNAASAPRSTRLLNWALLPALPGGTIVGLYGLLKTDKISALRP
Ga0207707_110908222	3300025912	Corn Rhizosphere	IYSAALATLGVVATLSAGLLLFLTGLSLGGSVNTHLPDASLPWVAAINFGYVIAIVVVLCARQFKPESGKRLTRLLNWALLPALPGGTVVGIYGLLKADSISGARMKIE
Ga0207695_100328292	3300025913	Corn Rhizosphere	VINHNRTYSAVLTTLAVLAAFSSGLLLFSAGASAGGALETHLPDWSLPWVAVINFAYAVAIIVTLCARRFKPQAGRRLTRLLNWALLPAAPGGTIVGIYGLLRADKQGH
Ga0207695_100636671	3300025913	Corn Rhizosphere	VINHNRTYSAVLTTLAVLAALSSGLLLFLAGASAGGALETHLPDWSLPWVAVINFAYAVAIIVTLCARRFEPQAGRRLTRFLNWALLPAAPGGTIVGIYGLLRADK
Ga0207695_102240652	3300025913	Corn Rhizosphere	MINHNKIYSVALATLGVLAVCSSGLVLFLTGASAGGSVNTHLPDASLPWIAAINFGYFVAILFVLCARGFQAESARRLTRILNWALLPALPGGTVVGLYGLLKAEKISGARRIKIE
Ga0207652_109678501	3300025921	Corn Rhizosphere	MIDHNKIYSAALATLGVVATLSAGLLLFLTGLSLGGSVNTHLPDASLPWVAAINFGYVIAIVVVLCARQFKPESGKRLTRLLNWALLPALPGGTVVGIYGLLKADSISGARMKIE
Ga0207694_102140292	3300025924	Corn Rhizosphere	MINHNKIYSVALATLGVLAVCSSGLVLFLTGASAGGSVNTHLPDASLPWVAAINFGYFVAILFVLCARGFQAESARRLTRILNWALLPALPGGTVVGLYGLLKAEKISGARRIKIE
Ga0207686_116009782	3300025934	Miscanthus Rhizosphere	MYSIALTTVGCIAACSAGLLLVLTGASLSGSVNTHLPDSLLPWVAAINFGYAVAIVVVLCARRCKAESAPRLTRLLNWALLPALPAGTVVGIYGLMEADKGRECAL
Ga0207661_106112592	3300025944	Corn Rhizosphere	CRITNDNERHEMKNHNRMYSAALSILGVFAALSSGLLLFLAGASVGGTVDTHLPNWSLPWIAIVNFAYAVAIIVTLCARRFRPETGRTLTRILNWALLPALPGGTAVGFYGLLRADRDGN
Ga0207667_101238202	3300025949	Corn Rhizosphere	MINHNKIYSVALATLGVLAVCSSGLVLFLTGASAGGSVNTHLPDASLPWVAAINFGYFVAILFVLCARGFQAESARRLTRILNWALLPALPGGTVVGLYGLLKAEKISGTRGIKIE
Ga0207703_108442842	3300026035	Switchgrass Rhizosphere	MYSAALAVLGMLAALSSGLLLFLAGASTGGAVHTHLPDWALPWVAIINFAYAIAIIVTLCARRFRPETGRVLTRVLNWALLPALPGGTVVGLYGLLRADKKIGDHAA
Ga0207639_103578182	3300026041	Corn Rhizosphere	MINHNKIYSVALATLGVLAVCSSGLVLFLTGASAGGSVHTHLPDASLPWVAAINFGYFVAILFVLCARGFQAESARRLTRILNWALLPALPGGTVVGLYGLLKAEKISGARGIKIE
Ga0207702_119739872	3300026078	Corn Rhizosphere	VKSESPNMINHNKIYSVALATLGVLAVCSSGLVLFLTGASAGGSVNTHLPDASLPWVAAINFGYFVAILFVLCARGFQAESARRLTRILNWALLPALPGGTVVGLYGLLKAEKISGARGIKIE
Ga0207674_104789611	3300026116	Corn Rhizosphere	MINHNKIYSVALATLGVLAVCSSGLVLFLTGASAGGSVHTHLPDASLPWVAAINFGYFVAILFVLCARGFQAESARRLTRILNWALLPALPGGTVVGLYGLL
Ga0209235_11218682	3300026296	Grasslands Soil	MINHNRIYPWVLAVLAVVAALSSALLFFLAHATAEGSLGIKLPAEWSLPWAAAINLLYAVAITIVLCARRFKPESGRSLTRLLNWALIPALLGGTIVGIYGLWTQRASDHAA
Ga0209056_100027212	3300026538	Soil	MINHNRIYPWVLEVLAVVAALSSALLFFLAHATAEGSLGIKLPAEWSLPWAAAINLLYAVAITIVLCVRRFKPESGRILTRLLNWALIPALPGGTIVGIYGLWTQRASDHAA
Ga0265334_100083723	3300028573	Rhizosphere	MINHNRTYSAALIALAAMAALSSGLLFFLTGVSMSGAVPTHLPAWSLPWVAMINFAYVVAITVVLCARKFRPESGRRLTWLLNLALLPAIPGGTVVGVYGLCKADKEHRRSRLENQ
Ga0265309_110258321	3300028599	Sediment	MNHNRTYAAALTVLGVFAALSSGVLLFLAGASTGGAVDTHLPVWSLPWVAIINFAYVVAIIVTLCARRFRPATGRTLTRVLNWALLPALPGGTVVGLYGLLRADRESW
Ga0265338_100727672	3300028800	Rhizosphere	MVNHNRMYSIALVTLGLTAAISSGLLLFLTDLSAGGSANTNLPDSSLPWIAAINFGYLIAIVIVLCARQFKPESGQRLTRLLNWALLPALPGGTVVGIYGLLKADRISRVDI
Ga0265338_102982812	3300028800	Rhizosphere	MINHDRTYSAALVALAAMAALSSGLLFFLTGVSMSGAVPTHLPAWSLPWVAMINFAYTVAIIGVLCARKFSPESGRRLTWLLNLALLPALPAGTVVGVYGLCQADKEHLKSRFENQ
Ga0307511_102035622	3300030521	Ectomycorrhiza	MINHNRMYSAALAALGATAAIGAGLLLFLAGASRGGSLNTHLPDSSLPWIAMINFAYAMAITIVLCARWFEPQSGQRLTRLLNWALLPALPGGTIVGVYGLWKADKISQMRSVNIE
Ga0268386_102969333	3300030619	Soil	MKNHNRTYSTALVVLGVLAALSSGLLLFLAGASVGGAVNTHLPAWSLPWVAIINFAYAIAIIITLCARRFRPETGRVLTRVLNWALLPAVPGGTVVGLYGLLRADRESR
Ga0170834_1092829011	3300031057	Forest Soil	AALGVIAAFSAGLLLYLAGAAGSGALHTHLPDASLPWIGMINFAYAIAITIVLCARRFKPESGQRLTRLLNLALLPALPGGTVVGIYGLLKADRISQRA
Ga0170824_1044410192	3300031231	Forest Soil	HNERRNMMNHNRTYSAVLAFLAVVAALSSGLLLFLAGASAGGALHTHLPDWSLLWVAVINFAYAVAIIVTLCARRLKPQAGRRLTRLLNWALLPAVPGGTVVGIYGLLRADKQRASDHLA
Ga0170824_1107363902	3300031231	Forest Soil	VESLNDRMKDTRNHNQTYSAALTVLGVFAALSSGLLLFLAGVSTARAVETHLPDWSLPWVAVINFAYAIAIIVTLCARRLKPETGRVLTRALNWALLPAVPGGTVVGLYGLFWADRENQ
Ga0170824_1192968531	3300031231	Forest Soil	HNMINHNRMYSAALAALGATAAIGAGLLLFLAGASRGGSLNTHLPDSSLPWIAMINFAYAMAITIVLCARWFEPQSGQRLTRLLNWALLPALPGGTIVGVYGLWKADKISQMRSVNIE
Ga0170824_1204288711	3300031231	Forest Soil	AVVAALSSGLLLFLAGASAGGTLHTHLPDWSLPWVAAINFVYAVAIIVTLCARRFKPEAGRRLTRLLNWALLPALPGGTIVGIYGLLRANKQRASDHAA
Ga0302323_1013180422	3300031232	Fen	MIDHNRTYSAVLATLAVVAALSSGLLLFLAGVSAGGALHADLPDWSLPWVAGINVAYAVAIVVTLCARRFKPEAGRRLTRLLNWALLPALPGGTIVGIYGLLRADRQSVSDRAAS
Ga0170820_113373691	3300031446	Forest Soil	HNQTYSAALTVLGVFAALSSGLLLFLAGVSTARAVETHLPDWSLPWVAVINFAYAIAIIVTLCARRLKPETGRVLTRALNWALLPAVPGGTVVGLYGLFWADRENQ
Ga0170818_1096022151	3300031474	Forest Soil	RTYSAVLATLAVVAALSSGLLLFLAGASAGGTLHTHLPDWSLPWVAAINFVYAVAIIVTLCARRFKPEAGRRLTRLLNWALLPALPGGTIVGIYGLLRANKQRASDHAA
Ga0310912_107346622	3300031941	Soil	MKSHNRTYSASLAVLAVLASVSSGFLFYLAGASASGPVETHLPEWSLPWVALINFDYAVAIVVTLCARQFKIETGCVLTRMLNWALLPAFPGGTVVGLYGLLRADKEGR
Ga0310911_104464042	3300032035	Soil	MKSHNRTYSASLAVLAVLASVSSGFLFYLAGASASGPVETHLPEWSLPWVALINFDYAVAIVVTLCARQFKIETGCVLTRMLNWALLPAFPGGTVVGLYGLLRA
Ga0315336_12479061	3300032132	Seawater	MKNHNRTYSTALTVLGVLAALSSGLLLFLAGAATAGGTVETHLPAWSLPWVAVIDFAYAIAIVVTLCARRLRPETGRMLTRVLNWALLPAVPGG
Ga0307472_1011722212	3300032205	Hardwood Forest Soil	MINHNRIYSAVLAALAVMAALSSGLLLFLAGASAGGALHTRLPDWSLSWVAAINFAYAVAIIVTLCARRFKPEAGRRLTRLLNWALLPAMPGGTVVGIYGLLRADKPRVSDHAA
Ga0335079_104089973	3300032783	Soil	MINHNRIYPWVLATQAVICALSSGLLFFLARATAEGSLGIKLPAEWSLPWAAAVNFVYAIAITIALCVRRFKPALGPRLTRLLNWALIPGFPGGTIVGIYGLWIQRANDAAV
Ga0335080_101090417	3300032828	Soil	MINHNRIYPWVLATQAVICALSSGLLFFLARATAEGSLGIKLPAEWSLPWAAAVNFVYAIAITIALCVRRFKPALGPRLTRLLNWALIPGFPGGTIVGIYGLWIQRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102931

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences