Metagenome / Metatranscriptome Family F102873

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102873
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	77 residues
Representative Sequence	MKALAISMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVSPPWSRAFGDNRY
Number of Associated Samples	63
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.39 %
% of genes near scaffold ends (potentially truncated)	48.51 %
% of genes from short scaffolds (< 2000 bps)	86.14 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.485 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.693 % of family members)
Environment Ontology (ENVO)	Unclassified (53.465 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.327 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 41.03% β-sheet: 14.10% Coil/Unstructured: 44.87%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00724	Oxidored_FMN	10.89
PF00581	Rhodanese	6.93
PF08240	ADH_N	3.96
PF00884	Sulfatase	1.98
PF13676	TIR_2	1.98
PF00753	Lactamase_B	1.98
PF12681	Glyoxalase_2	1.98
PF02780	Transketolase_C	1.98
PF00107	ADH_zinc_N	1.98
PF00873	ACR_tran	1.98
PF00456	Transketolase_N	1.98
PF03401	TctC	0.99
PF13191	AAA_16	0.99
PF07992	Pyr_redox_2	0.99
PF00111	Fer2	0.99
PF12576	DUF3754	0.99
PF13384	HTH_23	0.99
PF13683	rve_3	0.99
PF12697	Abhydrolase_6	0.99
PF03450	CO_deh_flav_C	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	10.89
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	10.89
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	1.98
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	1.98
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.49 %
Unclassified	root	N/A	48.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.49 %
Unclassified	root	N/A	48.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.49 %
Unclassified	root	N/A	48.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.51 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.97 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.51 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.89 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.97 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.99 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.51 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.97 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.99 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.51 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.97 %
Terricaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Terricaulis	0.99 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.97 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.99 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.99 %
Terricaulis silvestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Terricaulis → Terricaulis silvestris	0.99 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.97 %
Bradyrhizobium sp. LTSP849	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSP849	0.99 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.99 %
Terricaulis silvestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Terricaulis → Terricaulis silvestris	0.99 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1072496	Not Available	523	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10157350	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1044176	Not Available	803	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10083391	Not Available	681	Open in IMG/M
3300002906\|JGI25614J43888_10081281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Terricaulis → Terricaulis silvestris	897	Open in IMG/M
3300002917\|JGI25616J43925_10103979	Not Available	1169	Open in IMG/M
3300005332\|Ga0066388_102542146	Not Available	931	Open in IMG/M
3300005332\|Ga0066388_104223001	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005332\|Ga0066388_104532779	Not Available	707	Open in IMG/M
3300005332\|Ga0066388_105108270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	666	Open in IMG/M
3300005332\|Ga0066388_105231017	Not Available	658	Open in IMG/M
3300005332\|Ga0066388_108431640	Not Available	513	Open in IMG/M
3300005363\|Ga0008090_10187192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1354	Open in IMG/M
3300005363\|Ga0008090_10223406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1097	Open in IMG/M
3300005363\|Ga0008090_10257107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	820	Open in IMG/M
3300005436\|Ga0070713_101570240	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300005713\|Ga0066905_100105046	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300005713\|Ga0066905_100923336	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300005713\|Ga0066905_101427871	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005764\|Ga0066903_100322659	All Organisms → cellular organisms → Bacteria	2467	Open in IMG/M
3300005764\|Ga0066903_100399018	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300005764\|Ga0066903_100558460	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300005764\|Ga0066903_104854960	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005764\|Ga0066903_107120924	Not Available	579	Open in IMG/M
3300005764\|Ga0066903_107627897	Not Available	557	Open in IMG/M
3300005764\|Ga0066903_108916974	Not Available	508	Open in IMG/M
3300006800\|Ga0066660_10469916	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300009792\|Ga0126374_10600487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	812	Open in IMG/M
3300009792\|Ga0126374_11223797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300009792\|Ga0126374_11795394	Not Available	513	Open in IMG/M
3300010043\|Ga0126380_10629976	Not Available	850	Open in IMG/M
3300010047\|Ga0126382_11156846	Not Available	690	Open in IMG/M
3300010358\|Ga0126370_10907645	Not Available	796	Open in IMG/M
3300010359\|Ga0126376_12239984	Not Available	592	Open in IMG/M
3300010360\|Ga0126372_11208385	Not Available	780	Open in IMG/M
3300010366\|Ga0126379_10331477	All Organisms → cellular organisms → Bacteria → Proteobacteria	1543	Open in IMG/M
3300010366\|Ga0126379_10671452	Not Available	1128	Open in IMG/M
3300010376\|Ga0126381_105128321	Not Available	501	Open in IMG/M
3300010398\|Ga0126383_10431044	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300010398\|Ga0126383_11003545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300010398\|Ga0126383_12103466	Not Available	651	Open in IMG/M
3300010398\|Ga0126383_13111982	Not Available	542	Open in IMG/M
3300010863\|Ga0124850_1143305	Not Available	556	Open in IMG/M
3300012948\|Ga0126375_10328723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1074	Open in IMG/M
3300012948\|Ga0126375_10830919	Not Available	735	Open in IMG/M
3300012948\|Ga0126375_11152765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	642	Open in IMG/M
3300012971\|Ga0126369_11404868	All Organisms → cellular organisms → Bacteria → Proteobacteria	788	Open in IMG/M
3300012971\|Ga0126369_11485409	Not Available	767	Open in IMG/M
3300012971\|Ga0126369_11831442	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300016270\|Ga0182036_10767571	Not Available	784	Open in IMG/M
3300016319\|Ga0182033_11550232	Not Available	599	Open in IMG/M
3300016387\|Ga0182040_10044206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2722	Open in IMG/M
3300016445\|Ga0182038_10781360	Not Available	836	Open in IMG/M
3300021444\|Ga0213878_10116960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSP849	1091	Open in IMG/M
3300021560\|Ga0126371_11204952	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300021560\|Ga0126371_12029269	Not Available	692	Open in IMG/M
3300021560\|Ga0126371_12454987	Not Available	631	Open in IMG/M
3300021560\|Ga0126371_12748643	Not Available	597	Open in IMG/M
3300021560\|Ga0126371_13207085	Not Available	553	Open in IMG/M
3300026304\|Ga0209240_1229592	Not Available	564	Open in IMG/M
3300026319\|Ga0209647_1023461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3759	Open in IMG/M
3300027874\|Ga0209465_10403326	Not Available	684	Open in IMG/M
3300028768\|Ga0307280_10019978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1917	Open in IMG/M
3300031543\|Ga0318516_10107071	Not Available	1584	Open in IMG/M
3300031543\|Ga0318516_10160003	Not Available	1295	Open in IMG/M
3300031544\|Ga0318534_10001137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	10225	Open in IMG/M
3300031564\|Ga0318573_10136486	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300031564\|Ga0318573_10334201	Not Available	812	Open in IMG/M
3300031572\|Ga0318515_10748363	Not Available	516	Open in IMG/M
3300031719\|Ga0306917_10205733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1492	Open in IMG/M
3300031770\|Ga0318521_10048288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2184	Open in IMG/M
3300031770\|Ga0318521_10086139	Not Available	1704	Open in IMG/M
3300031780\|Ga0318508_1001124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4567	Open in IMG/M
3300031781\|Ga0318547_10215891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1149	Open in IMG/M
3300031792\|Ga0318529_10069728	All Organisms → cellular organisms → Bacteria → Acidobacteria	1548	Open in IMG/M
3300031795\|Ga0318557_10059637	Not Available	1625	Open in IMG/M
3300031796\|Ga0318576_10003430	All Organisms → cellular organisms → Bacteria → Proteobacteria	5161	Open in IMG/M
3300031821\|Ga0318567_10683460	Not Available	582	Open in IMG/M
3300031832\|Ga0318499_10002486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5047	Open in IMG/M
3300031832\|Ga0318499_10201338	Not Available	776	Open in IMG/M
3300031833\|Ga0310917_10461175	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300031879\|Ga0306919_10048480	All Organisms → cellular organisms → Bacteria	2797	Open in IMG/M
3300031879\|Ga0306919_10496610	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300031893\|Ga0318536_10129135	All Organisms → cellular organisms → Bacteria → Proteobacteria	1279	Open in IMG/M
3300031897\|Ga0318520_10035284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2536	Open in IMG/M
3300031941\|Ga0310912_10766350	Not Available	746	Open in IMG/M
3300031981\|Ga0318531_10423598	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300032025\|Ga0318507_10267431	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300032044\|Ga0318558_10134070	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300032044\|Ga0318558_10145475	All Organisms → cellular organisms → Bacteria → Proteobacteria	1138	Open in IMG/M
3300032051\|Ga0318532_10204849	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300032052\|Ga0318506_10196553	Not Available	889	Open in IMG/M
3300032054\|Ga0318570_10044271	All Organisms → cellular organisms → Bacteria → Proteobacteria	1825	Open in IMG/M
3300032055\|Ga0318575_10231574	Not Available	930	Open in IMG/M
3300032063\|Ga0318504_10190689	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300032064\|Ga0318510_10087528	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300032066\|Ga0318514_10290473	Not Available	863	Open in IMG/M
3300032076\|Ga0306924_11832317	Not Available	631	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.20%
Loam	Environmental → Terrestrial → Soil → Loam	19.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.95%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	27.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	18.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.96%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10724961	3300000580	Forest Soil	IQGLAGLLRDGTTTDRECPMKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQGVRYVRHHYRYRLGRSSYYAYGAVPPPWSRRFGDNRY*
AF_2010_repII_A1DRAFT_101573501	3300000597	Forest Soil	MKALTISMVAGAALCSLISVPASAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRGGYYAYGAVSPPWSRAFGGNRY*
AF_2010_repII_A100DRAFT_10441762	3300000655	Forest Soil	MKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQSVRYVHHHYRYRLGRSSYYAYGAVSPPWSRRFGGNRY*
AF_2010_repII_A001DRAFT_100833912	3300000793	Forest Soil	MKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQGVRYVRHHYRYRLGRSSYYAYGAVPPPWSRRFGDNRY*
JGI25614J43888_100812812	3300002906	Grasslands Soil	MKALAISMVVGAALCSLISVPALAMPMSNLAAAASDLALGQSVRYVHHHYRYRLGRSSYYAYGAVSPPWSRAFGDNRY*
JGI25616J43925_101039791	3300002917	Grasslands Soil	MKALAISMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVSPPWSRAFGDNRY*
Ga0066388_1025421462	3300005332	Tropical Forest Soil	MKALAISMVAGAALCSLTSVPALAMPMSNLAAAASDLALGQTVRYVHHHYRYRLGRSSYYAYGAVSPPWSRRFGDNRY*
Ga0066388_1042230012	3300005332	Tropical Forest Soil	MKTLAITMVAGAALCSLISVPALAKPMSNLAAAASDLALGQGVRYLHHHYRHRLGRSSYYAYGAVPPWSRRFGDNRY*
Ga0066388_1045327791	3300005332	Tropical Forest Soil	MKALATSMVAGAALCSLISVPALAMPMSNLAAAASGLALGQSVRYVHHHYRYRSGRSSYYAYGAVSP
Ga0066388_1051082702	3300005332	Tropical Forest Soil	MKALAISMVAGAALCSLVSMPASAMPMSNLAAAASDLALGQSVRYVHHHHRYRLGRGGYYAYGAVSPPWSRAFGNNRY*
Ga0066388_1052310173	3300005332	Tropical Forest Soil	MKALSISLVACAALCSLMSAPASAMPTSNLVAAASELALGQSVRYVRHPYRYRLSRSSYYAYGAGYYSYR
Ga0066388_1084316402	3300005332	Tropical Forest Soil	MRALAISMVAGAALCSLISVPALAMPTSNLAVAASDLALGQSVRYVHHHYRYRLGRGSYYAYGAAPPPWSRAFGDNRY*
Ga0008090_101871923	3300005363	Tropical Rainforest Soil	MKALTISMVAGAALCSLISVPASAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRGSYYAYGAVSPPWSRAFGGNRY*
Ga0008090_102234061	3300005363	Tropical Rainforest Soil	MKALAISMVVGAALCSLISVPALAMPVSNLAAAASDLALGQSVRYVHHHYRYRLGRSSYYAYGAVPPPWSRRFGDNRY*
Ga0008090_102571073	3300005363	Tropical Rainforest Soil	MKALAISMVAGAALCSLMSVPASAMPMSNLAATASDLALGQSVRYGHHHYRYRLGRGGYYAYGAVSPPWSRRFGDNHY*
Ga0070713_1015702401	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKALAISMVAGAALCSLMSVPASAMPMSNLAAAASDLALGQSVRYVRHPYRYRLSRSSYYAYGAGYYGY
Ga0066905_1001050462	3300005713	Tropical Forest Soil	MKALAISMVAGAALCSFASVPASAMPLSNLAVAASDLALGQSVRYVRHHYRYRLGRSSYYAYGALSPPWSRTFGGNRY*
Ga0066905_1009233362	3300005713	Tropical Forest Soil	MKALATSMVAGAALCSLISVPALAMPMSNLAAAASGLALGQSVRYVHHHYRYRSGRSSYYAYGAVSPPWSRAFGDNRY*
Ga0066905_1014278713	3300005713	Tropical Forest Soil	MVAGAALCSLISVPALAMPMSNLAAAASDLALGQSVRYLHHHYRYRLGRSSYYAYGAVSPPWSRAFGNNRY*
Ga0066903_1003226592	3300005764	Tropical Forest Soil	MKALAISMVAGAALCGLISVPALAMPMSNLAAAASDLALGQSVRYLHHHYRHRLGRSSYYAYGAVQPPWSRRFGDNHY*
Ga0066903_1003990183	3300005764	Tropical Forest Soil	MKALAISMVAGAALCSLASVPASAMPLSNLAVAASDLALGQSVRYVRHHYRYRLGRSSYYAYGALSPPWSRTFGGNRY*
Ga0066903_1005584604	3300005764	Tropical Forest Soil	MKARAISMVAIAALCSLMSAPALAMPMSNLAARASDLALGQSVRYVHHHYRYRLGRSYYGYGAVPPPWSRAFGDNRY*
Ga0066903_1048549602	3300005764	Tropical Forest Soil	PMKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLARGQSVRYVHHHYRYRLGRGSYSRAVAPPWSRRFGDNRY*
Ga0066903_1060354952	3300005764	Tropical Forest Soil	VAVGDTIHASSGLAGLLRECPMKALAISMVAGAALCSLVSMPALAMPMSNLAATASDLALGQSVRYVHHHRYRLGRGGYYAYGAVSPPWSRAFGNNRY*
Ga0066903_1071209242	3300005764	Tropical Forest Soil	MVAGAALCSLVSVPASAMPMSNLAAAASDLALGQSVRYVHHHYRYRLGRGSYYAYGAASPPWSRAFGNNRY*
Ga0066903_1076278971	3300005764	Tropical Forest Soil	MVAGAALCSLMSVPASAMPMSNLAAAASDLALGQSVRYVHHHYRYRLGRSSYYGYGAAPPPWSRAFGDNRY*
Ga0066903_1089169741	3300005764	Tropical Forest Soil	GDTIHASSGLAGLLRECPMKALAISMVAGAALCSLVSVPAPAMPMSNLAATASELALGQSVRYVRHHYRYRLGRGNYYAYGAVSPPWSRAFGNNRY*
Ga0066660_104699163	3300006800	Soil	MKALAISMVVGAALCSVISVPASAVPMSNLAAAASDLALGQSVRYVHHHYRYRLGRSSYYAYGAVSPPWSRAFGDNRY*
Ga0126374_106004872	3300009792	Tropical Forest Soil	MKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQSVRYLHHQYRYRLGRSSYYAYGAVSPPW
Ga0126374_112237971	3300009792	Tropical Forest Soil	MKALAISMVAGAALCSLMSVPASAMPMSNLAVAASDLALGQSVRYVRHPYRYRLSRSSYYAYGAGYYRPYGFYG
Ga0126374_117953941	3300009792	Tropical Forest Soil	MKALAISMVAGAALCSLVSVPALAMPLSNLAAAASDLALGQSVRYLHHHYRYRLGRSSYYAYGAVSPPWSRRFGDNRY*
Ga0126380_106299762	3300010043	Tropical Forest Soil	MKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQSVRYLHHHYRYRLGRSSYYAYGAVSPPWSRRFGDNRY*
Ga0126382_111568461	3300010047	Tropical Forest Soil	NRECPMKALAISMVAGAALCSLTSVPALAMPMSNLAAAASDLALGQTVRYVHHHYRYRLRRSSYYAYGAAPPPWSRRFGDNRY*
Ga0126370_109076452	3300010358	Tropical Forest Soil	MKALAISLVAGAALCSLMSVPASAMPMSNLAVAASDLALGQSVRYVRHHYRYRLGRGGYYAYGAAPPPWSRAFG
Ga0126376_122399841	3300010359	Tropical Forest Soil	MKALAISLVAGAALCSLMSVPASAMPMSNLAVAASDLALGQSVRYVRHHYRYRLGRGGYYAYGAAPPPWSRAFGDNRY*
Ga0126372_112083852	3300010360	Tropical Forest Soil	MKALAISLVAGAALCSLISVPALAMPMGNLAVAASGLALGQSVRYVRHHYRYRLGRGGYYAYGAAPPPWSRAFGDNRY*
Ga0126379_103314772	3300010366	Tropical Forest Soil	MRALAISMVAGAALCSLISVPALAMPMSNLAVAASDLALGQSVRYVRHHYRYRLGRGGYYAYGAAPPPWSRAFGDNRY*
Ga0126379_106714522	3300010366	Tropical Forest Soil	MKALAISMVAGAALCSLVSVPALAMPLSNLAAAASDLALGQSVRYLHHHYRYRLGRSSYYAYGAVSPPWSRAFGNNRY*
Ga0126379_138160081	3300010366	Tropical Forest Soil	LAVAVRDTIHASSGLAGLLRECPMKALAISMVAGAALCSLMSVPASAMPMSNLAATASDLALGQSVRYGHHHYRYRLGRGGYYAYGAVSPPWSRRFGDNHY*
Ga0126381_1034745281	3300010376	Tropical Forest Soil	VAVRDTIHASSGLAGLLRECPMKALAISMVAGAALCSLMSVPASAMPMSNLAATASDLALGQSVRYGHHHYRYRLGRGGYYAYGAVSPPWSRRFGDNHY*
Ga0126381_1051283211	3300010376	Tropical Forest Soil	VAGAALCSLVSVPASAMPMSNLTATASDLALGQSVRYVHHHYRYRLGRGGYYAYGAVSPPWSRRFGDNHY*
Ga0126383_104310441	3300010398	Tropical Forest Soil	VAVRDTIHASSGLAGLLRECPMKALAISMVAGAALCSLVSVPAPAMPMSNLAATASDLALGQSVRYGHHGAVSPPWSRRFGDNHY*
Ga0126383_110035452	3300010398	Tropical Forest Soil	MKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQSVRYLHHHYRYRLGRSSYYAYGAVSP
Ga0126383_121034662	3300010398	Tropical Forest Soil	MKALAISLVAGAALCSLMSVPASAMPMGNLAVAASDLALGQSVRYVRHHYRYRLGRGGYYAYGAAPPPWSRAFGDNRY*
Ga0126383_131119821	3300010398	Tropical Forest Soil	MKALAISLVAGAALCSLMSVPASAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVSPPWSRAFGDNRY*
Ga0124850_11433051	3300010863	Tropical Forest Soil	MKALAISLVAGAALCSLISVPALAMPMGNLAVAASDLALGQSVRYVRHHYRYRLGRGGYYAYGAAPPPWSRAFGDNRY*
Ga0126375_103287232	3300012948	Tropical Forest Soil	MKALAISLVAGAALCSLISVPALAMPMGNLAVAASDLALGQSVRYVHHHYRYRLGRSSYYAYGAAPPPWSRAFGDNRY*
Ga0126375_108309191	3300012948	Tropical Forest Soil	RECPMKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQSVRYLHHHYRYRLGRSGYYAYGAVSPPWSRRFGANRY*
Ga0126375_111527652	3300012948	Tropical Forest Soil	MKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQSVRYLRHHYRYRLGRSSYYAYGAVSPPWSRRFGDN
Ga0126369_114048681	3300012971	Tropical Forest Soil	MKALAISLVAGAALCSLMSVPASAMPMSNLAAAASDLALGQSVRYVRHPYRYRLSRSSYYAYGAGYYGY
Ga0126369_114854092	3300012971	Tropical Forest Soil	MKALTISVVAGAALCSLVSVPALAMPLSNLAAAASDLALGQSVRYLHHHYRYRLGRSSYYAYGAVSP
Ga0126369_118314421	3300012971	Tropical Forest Soil	SVVAGAALCSLVSVPALEMPLSNLAAAASDLALGQSVRYLHHHYRYRLGRSSYYAYGAVSPPWSRAFGNNRY*
Ga0182036_107675711	3300016270	Soil	AISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVTPPWSRAFGGNRY
Ga0182033_115502321	3300016319	Soil	VKSLSIGLVAGAALCGVMSAPASAMPMGNLAAAASDLTLGQSVRYVRYPYRYRLSRSSYYAYGAGYYGYRGGYL
Ga0182040_100442063	3300016387	Soil	LAISMVAGAALCSLISVPALAMPMSNLVAAASDLALGQSVRYVHHHYRYRLGRSSYYAYGAVSPP
Ga0182038_107813602	3300016445	Soil	MVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVTPPWSRAFGGNRY
Ga0213878_101169602	3300021444	Bulk Soil	MKALAITMVAGAALCSLISVPALAMPMSNLTAAASDLALGQSVRYFHHHYRYRLGRSSYYAYGAVSPPWSRRFGANRY
Ga0126371_112049522	3300021560	Tropical Forest Soil	MKARAISMVAIAALCSLMSAPALAMPMSNLAARASDLALGQSVRYVHHHYRYRLGRSYYGYGAVPPPWSRAFGDNRY
Ga0126371_120292692	3300021560	Tropical Forest Soil	MKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQSVRYLHHHYRYRLGRSSYYAYGAVSPPWSRRFGDNRY
Ga0126371_124549871	3300021560	Tropical Forest Soil	ALAISMVAGAALCSLISVPALAMPMSNLAVAASDLALGQSVRYVRHHYRYRLGRGSYYAYRAAPPPWSRAFGDNRY
Ga0126371_127486431	3300021560	Tropical Forest Soil	VGDTIHASSGLAGLLRECPMKALAISMVAGAALCSLVSVPAPAMPMSNLAATASELALGQSVRYVRHHYRYRLGRGNYYAYGAVSPPWSRAFGNNRY
Ga0126371_132070851	3300021560	Tropical Forest Soil	MKALAISMVAGAALCSLVSVPASAMPMSNLTATASDLALGQSVRYVHHHYRYRLGRGGYYAYGAVSPPWSRRFGDNHY
Ga0209240_12295921	3300026304	Grasslands Soil	MKALAISMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVSPPWSRAFGDNRY
Ga0209647_10234612	3300026319	Grasslands Soil	MKALAISMVVGAALCSLISVPALAMPMSNLAAAASDLALGQSVRYVHHHYRYRLGRSSYYAYGAVSPPWSRAFGDNRY
Ga0209465_104033262	3300027874	Tropical Forest Soil	MRALAISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQSVRYLHHHYRYRLGRSSYYAYGAVSPPWSRRFGDSRY
Ga0307280_100199784	3300028768	Soil	MKALTISMVAGAALCSVVATPASALPNSNLAAATSDLALSQSVRDVRHPYRYRLSRGNYNAYGAAY
Ga0318516_101070711	3300031543	Soil	MKALAISMVVGAALCSLISVPALAMPMSNLVAAASDLALGQSVRYVHHHYRYRLGRSSYYAYGAVSPPWSRAFGDNRY
Ga0318516_101600032	3300031543	Soil	MKALAISMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVTPPWSRAFGGNRY
Ga0318534_100011377	3300031544	Soil	MKALAISMVAGAALCGLISVPALAMPMSNLAAAASDLALGQSVRYLHHHYRYRLGRSSYYAYGAVSPPWSRRFGDNRY
Ga0318573_101364861	3300031564	Soil	MKALAISMVVGAALCSLISVPALAMPMSNLVAAASDLALGQSVRYVHHHYRYRLGRSSYYAYGAVS
Ga0318573_103342011	3300031564	Soil	AISMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVTPPWSRAFGGNRY
Ga0318515_107483632	3300031572	Soil	MKALAISMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAV
Ga0306917_102057332	3300031719	Soil	MKALAISLVAGAALCSLMSVPASAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRGGYYAYGAAPPPWSRAFGDNRY
Ga0318521_100482884	3300031770	Soil	MKALAISMVAGAALCSLISAPAFAMPMSNLAAAASDLALGQSVRYVHHHYRYRLGRSSYYAHGAV
Ga0318521_100861392	3300031770	Soil	MKALAISMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRNHYRYRLGRSSYYAYGAVTPPWSRAFGGNRY
Ga0318508_10011243	3300031780	Soil	MKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQSVRYLHHHYRYRLGRSSYYAYGAVSPPWSRRFGDSRY
Ga0318547_102158911	3300031781	Soil	MKALAITMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVTPPWSRAFGGNRY
Ga0318529_100697281	3300031792	Soil	MKALAISMVAGAALCGLISVPALAMPMSNLAAAASDLALGQSVRYLHHHYRYRLGRSSYYAYGAVSPPWSRRFGDSRY
Ga0318557_100596372	3300031795	Soil	ALAISMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVTPPWSRAFGGNRY
Ga0318576_100034303	3300031796	Soil	MKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQSARYVHHHYRYRLGRSSYYAYGAVSPPWSRRFGDNRY
Ga0318567_106834602	3300031821	Soil	PMKALAISMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVTPPWSRAFGGNRY
Ga0318499_100024863	3300031832	Soil	MKALAISMVAGAALCSLISVPALAMPMSNLAAADLALGQSVRYLHHHYRYRLGRSSYYAYGAVSPPWSRRFGDNRY
Ga0318499_102013382	3300031832	Soil	CPMKALAISMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVTPPWSRAFGGNRY
Ga0310917_104611751	3300031833	Soil	MKALAISMVAGAALCSLVSAPALEMPMSNLAAAASDLALGQSVRYVHHHYRYRLGRSSYYAHGAVSPPWSRAFGGNRY
Ga0306919_100484801	3300031879	Soil	ISMVVGAALCSLISVPALAMPMSNLVAAASDLALGQSVRYVHHHYRYRLGRSSYYAYGAVSPPWSRAFGDNRY
Ga0306919_104966101	3300031879	Soil	MQALAISMVAGAALCSLISVPASAMPMSNLAAAASDLALGQSVRYVRHPYRYRLRRSSYYAYGAGYYGYRGGY
Ga0318536_101291352	3300031893	Soil	MQALAISMVAGAALCSLISVPASAMPMSNLAAAASDLALGQSVRYVRHPYRYRLRRSSYYAYGAGY
Ga0318520_100352844	3300031897	Soil	AISMVAGAALCSLISAPALAMPMSNLAAAASDLALGQSVRYVRHHHRYRLGRSSYYAYGAVSPPWSRAFGGNRY
Ga0310912_107663501	3300031941	Soil	MKALAISMVVGAALCSLISVPALAMPMSNLVAAASDLALGQSVRYVHHHYRYRLGRSSYYAYGA
Ga0318531_104235981	3300031981	Soil	GTTTNRESPMKALAISMVAGAALCGLISVPALAMPMSNLAAAASDLALGQSVRYLHHHYRYRLGRSSYYAYGAVSPPWSRRFGDNRY
Ga0318507_102674312	3300032025	Soil	MKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLALGQSARYVHHHYRYRLGRSSYYAYGAVSPPWSRRFGDSRY
Ga0318558_101340701	3300032044	Soil	NRECPMKALAISMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVTPPWSRAFGGNRY
Ga0318558_101454752	3300032044	Soil	MQALAISMVAGAALCSLISVPASAMPMSNLAAAASDLALGQSVRYVRHPYRYRLRRSSYYAYGAGYYGYR
Ga0318532_102048492	3300032051	Soil	MKALAISMVAGAALCSLMSVPASAMPMSNLAAAASDLALGQSVRYVRHPYRYRLSRRSYYAYGAGSPCYP
Ga0318506_101965531	3300032052	Soil	LGVGGLAYGTGTTNRECPMKALAISMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVTPPWSRAFGGNRY
Ga0318570_100442711	3300032054	Soil	MQALAISMVAGAALCSLISVPASAMPMSNLAAAASDLALGQSVRYVRHPYRYRLRRSSYYAYGAGYYGYRGGYPG
Ga0318575_102315741	3300032055	Soil	CPMKALAISMVVGAALCSLISVPALAMPMSNLVAAASDLALGQSVRYVHHHYRYRLGRSSYYAYGAVSPPWSRAFGDNRY
Ga0318504_101906892	3300032063	Soil	MQALAISMVAGAALCSLISVPASAMPMSNLAAAASDLALGQSVRYVRHPYRYRLRRSSYYAYGAGYYGYRGGYP
Ga0318510_100875281	3300032064	Soil	TNRECPMKALAISMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVTPPWSRAFGGNRY
Ga0318514_102904731	3300032066	Soil	PMKALAITMVAGAALCSLVSVPALAMPMSNLAAAASDLALGQSVRYVRHHYRYRLGRSSYYAYGAVTPPWSRAFGGNRY
Ga0306924_118323171	3300032076	Soil	MKALAISMVAGAALCSLISVPALAMPMSNLAAAASDLAPGQNVRYLHHHYRYRLGRSSYYAYGAAPPPWSRRFGDTRY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102873

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences