Basic Information | |
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Family ID | F102847 |
Family Type | Metagenome |
Number of Sequences | 101 |
Average Sequence Length | 56 residues |
Representative Sequence | MEFIAFLIVGYVEISPGQCQLEYLRYNDIHSLVIPCHENGTLQKGSVGQLPSIKYLKP |
Number of Associated Samples | 51 |
Number of Associated Scaffolds | 101 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 70.30 % |
% of genes near scaffold ends (potentially truncated) | 36.63 % |
% of genes from short scaffolds (< 2000 bps) | 75.25 % |
Associated GOLD sequencing projects | 51 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.53 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (41.584 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (45.545 % of family members) |
Environment Ontology (ENVO) | Unclassified (65.347 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (71.287 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 4.65% β-sheet: 39.53% Coil/Unstructured: 55.81% |
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Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.53 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Freshwater Freshwater Lake Freshwater Lake Sediment Freshwater Freshwater, Plankton Freshwater Lake Freshwater Lake Sediment Marine Plankton Freshwater Aqueous Freshwater To Marine Saline Gradient Marine Estuarine Estuarine Water |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
RCM41_10099704 | 3300001847 | Marine Plankton | MIEMIAFAIVGYMQIGPDSCQIDYLRYNEVHSLVIPCQENGTPLLGSVGMLQSIKYSKP* |
RCM31_100741054 | 3300001851 | Marine Plankton | MEFIAFMIVGYAEISPGECKLEYFRYNEIHSLVVPCQENGTLQRGSVGMLQSIKYSKQ* |
GOS2236_10133806 | 3300001968 | Marine | VIDLIAFMIVGYVEIGPGSCQVDYFRYNEVQSLVIPCHENGTLQRESVGMLPSI |
GOS2236_10320131 | 3300001968 | Marine | MEFIAFLIVGYAEISPGSCQVEYLRYDEIHSLVIPCQENGTLQRGSVGMLPSIRYSKP* |
GOS2236_10891353 | 3300001968 | Marine | MIEMIAFAIVGYVQIGPDSCQIDYLRYNEVHSLVIPCQENGTPLLGSVGMLQSTKYSKP* |
GOS2236_10932644 | 3300001968 | Marine | MELIAFMIVGYMEIGPGTCQVEYLRYNEVHSLVAPCHENGTPLKGSVGILPSITYSKP* |
GOScombined01_1037194554 | 3300002040 | Marine | MELIAFMIVGYMEIGPGTCQVEYLRYNEVHSLVAPCHENGTPLKGSVGILPSITYLKP* |
B570J40625_1016398522 | 3300002835 | Freshwater | VIELIAFMIVGYVEISPGSCEVNYLRYNEVHSLVIPCHENGTPLKGSVGMLPYIKYLKQ* |
Ga0068876_100010295 | 3300005527 | Freshwater Lake | MIEFIAFMIVGYIEISPGQCQLEYFRYDDIHSLIIPCQENGTPLKGSVGMLQSIKYSKP* |
Ga0068876_100634214 | 3300005527 | Freshwater Lake | MIDMIAFMIVGYSEISSGSCQLEYFRYNEVHSLVIPCQENGTLQKGSVGMLQFTKY* |
Ga0079957_10079405 | 3300005805 | Lake | MIDMIAFMIVGYVEIGPASCQIDYLRYNEIHSLVIPCQENGTRLIGNVGMLPSIRYSKP* |
Ga0079957_10102597 | 3300005805 | Lake | MIDLIAFMIVGYVEVGPGSCQIDYLRYNEVHSLVIPCHENGTPLKGSVGMLQSIKYSKP* |
Ga0079957_10394053 | 3300005805 | Lake | MEFIAFLIVGYIEISPGQCQIEYFRYNEVHSLIIPCHENGTLRIGSVGMLQSTKYSKP* |
Ga0079957_13111023 | 3300005805 | Lake | MIDLIAFMIVGYTEIGPGSCQIDYLRYNEVHSLVIPCQENGTPLSGSVGMLPSIRY |
Ga0070743_101317411 | 3300005941 | Estuarine | MELIAFLIVGYAEISPGSCQLEYFRYNEIHSLVIPCHENGTLLKGSVGMLPS |
Ga0070749_102603274 | 3300006802 | Aqueous | VMELIAFMIVGYVEIGPDSCKIDYLRYNEVHSLVMPCQENGTPLKGSVGMLPSIKYSKQ* |
Ga0070745_11349843 | 3300007344 | Aqueous | MELIAFLIVGYAEISPGSCQLEYFRYNDIHSLVIPCHENGTLQKGSVGMLPSIKYSKP* |
Ga0114364_11036324 | 3300008267 | Freshwater, Plankton | MELIAFMIVGYTEISPGQCQLEYFRYNEIHSLVVPCQENGTLQKGSVGMLPSIKY |
Ga0114876_100386811 | 3300008448 | Freshwater Lake | MEFIAFMIVGYAEISPGSCQIDYLRYNEVHSLVIPCHENGTLPKGSVGMLPSIKYSKP* |
Ga0114876_10438012 | 3300008448 | Freshwater Lake | MIEFIAFMIVGYAEIDTDSCQLEYLRYNEVHSLVIPCQENGTLLRGSVGMLPSIKYSKQ* |
Ga0136656_10677443 | 3300010318 | Freshwater To Marine Saline Gradient | MIEFIAFMIVGYVETSPGQCQLEYFRYNEIHSLVIPCHENGTLPKGSVGMLPSIKYSKP* |
Ga0129333_100184993 | 3300010354 | Freshwater To Marine Saline Gradient | MELIAFMIVGYVEIGPDSCKIDYLRYNEVHSLVMPCQENGTPLKGSVGMLPSIKYSKQ* |
Ga0129333_100576482 | 3300010354 | Freshwater To Marine Saline Gradient | MIDLIAFMIVGYAEVGPGSCQLEYLRYNQIHEIIIPCQENGTLLKGSVGMLPSTKYSKL* |
Ga0129333_100703803 | 3300010354 | Freshwater To Marine Saline Gradient | MEFIAFMIVGYVEISPGQCQLEYLRYNEIHSLTIPCQENGTLQRGSVGMLPSIKYSKL* |
Ga0129333_102476675 | 3300010354 | Freshwater To Marine Saline Gradient | MMEFIAFMIVGYSEIGPGSCQLEYLRYNEIHSLVIPCQENGTPLRGNVGMLQSTKYSK |
Ga0129333_104824193 | 3300010354 | Freshwater To Marine Saline Gradient | MIEFIAFMIVGYMETSPGQCQLEYFRYNEIHSLVIPCHENGTLPKGSVGMLPSIKYSKP |
Ga0129333_105377923 | 3300010354 | Freshwater To Marine Saline Gradient | MELIAFIIVGYVEVSPGSCQIDYLRYNEVHSLVIPCHENGTLQRGSVGMLPSIKYSKP* |
Ga0129333_114971182 | 3300010354 | Freshwater To Marine Saline Gradient | MMEFIAFAIVGYVEIGPGSCQVEYLRYNDIHSLVIPCHENGTLPKGSVGMLPSIKYSKP* |
Ga0129333_115917601 | 3300010354 | Freshwater To Marine Saline Gradient | MEFIAFMIIGYAEISPGSCQIDYLRYNEVHSLVIPCHENGTLQKGSV |
Ga0129333_116422281 | 3300010354 | Freshwater To Marine Saline Gradient | MEFIAFMIVGYVEISPGSCQIDYLRYNEVHSLVIPCHENGTLQRGSVGMLPS |
Ga0129336_104869374 | 3300010370 | Freshwater To Marine Saline Gradient | MINLIAFMIVGYVEIGPSECQIHYDRYNEVHSIVVPCQENGTPLQGNVGMLPSIK |
Ga0129336_106153593 | 3300010370 | Freshwater To Marine Saline Gradient | MEFIAFMIVGYTEISPGSCQIDYLRYNEVHSLVIPCHENGTLQKGSVG |
(restricted) Ga0172369_102316733 | 3300013125 | Freshwater | MDLIAFLIVGYVEISPGQCRIDYLRYDDIHSLVIPCHENGTLQRGSVGMLPSIKYLKL* |
(restricted) Ga0172367_104981613 | 3300013126 | Freshwater | MDLIAFLIVGYVETSSGQCQLEYLRYNDIHSLVVPCHENGTLQRGSVGMIPSIKYLKQ* |
(restricted) Ga0172367_106231321 | 3300013126 | Freshwater | MEFIAFLIVGYVEVSPDSCRLEYLRYNDIHSLVIPCHENGTLQRGSVGMIP |
(restricted) Ga0172366_103097892 | 3300013128 | Sediment | MDLIAFLIVGYVEISPGQCRIDYLRYDDIHSLVIPCHENGTLQRGSVGMIPSIKYLKQ* |
(restricted) Ga0172373_101271044 | 3300013131 | Freshwater | MEFIAFMIVGYVELTPGNCQLEYFRYNEIHSLVIPCHENGTLQRGSVGQLPSIKYLKP* |
(restricted) Ga0172372_102030641 | 3300013132 | Freshwater | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQRGSVGMIPSIKYLKP* |
(restricted) Ga0172372_104916241 | 3300013132 | Freshwater | MDLIAFLIVGYVETSSGQCQLEYLRYNDIHSLVVPCHENGTLQRGSVGMIPSIKYLKL* |
(restricted) Ga0172362_110082533 | 3300013133 | Sediment | WKEKVMDLIAFLIVGYVEISPGQCRIDYLRYDDIHSLVIPCHENGTLQRGSVGMLPSIKYLKL* |
(restricted) Ga0172375_107053463 | 3300013137 | Freshwater | MDLIAFLIVGYVETSSGQCQLEYLRYNDIHSLVVPCHENGTLQRGSVGMIPSIKYLKP* |
Ga0169931_101127197 | 3300017788 | Freshwater | MEFIAFMIVGYVEIGPGSCQVDYLRYNEIHSLVIPCQENGTLQRGSVGMLPSIKYSKP |
Ga0169931_104863274 | 3300017788 | Freshwater | MEFIAFLIVGYVEVSPDSCRLEYLRYNDIHSLVIPCHENGTLQRGSVGMIPSIKY |
Ga0194113_103402651 | 3300020074 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCSLEYLRYNDIHSLVIPCHENGTLQRGSVGMIPSIKYLKP |
Ga0194113_103934722 | 3300020074 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQKGSVGILPSIKYLKP |
Ga0194113_104812963 | 3300020074 | Freshwater Lake | MEFIAFLIIGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQKGSVGILPSIKYLKP |
Ga0194113_104854452 | 3300020074 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQRGSVGMIPSIKYLKP |
Ga0194113_106050483 | 3300020074 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQRGSVGMIPSIKY |
Ga0194111_108023512 | 3300020083 | Freshwater Lake | MEFIAFLIVGYVETSPGQCQLEYLRYNDIHSLVIPCHENGTLQRGSVGQLPSIKYL |
Ga0194110_107522562 | 3300020084 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQRGSV |
Ga0194110_108225882 | 3300020084 | Freshwater Lake | MEFIAFLIVGYVETSPGQCQLEYLRYNDIHSLVVPCHENGTLQRGSVGMLP |
Ga0194112_100442388 | 3300020109 | Freshwater Lake | MTELIAFLIVGYVEVSPGQCQLDYFRYNEVHSLVIPCHENGTLQKGSVGMLQFIKF |
Ga0194112_102754382 | 3300020109 | Freshwater Lake | MEFIAFLIVGYVETSPGQCQLEYLRYNDIHSLVVPCHENGTLQRGSVGMLPSIKYLKL |
Ga0194112_105721212 | 3300020109 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYFRYNDIHSLVVPCHENGTLQRGSVGILPSIKYLKP |
Ga0194112_109645501 | 3300020109 | Freshwater Lake | MEFIAFLIVGYVETSPGQCQLEYLRYNDIHSLVIPCHENGTLQRGSVGQ |
Ga0211736_106016623 | 3300020151 | Freshwater | VIELIAFMIVGYVEISPGSCEVNYLRYNEVHSLVIPCHENGTPLKGSVGMLPYIKYLKQ |
Ga0211736_107014771 | 3300020151 | Freshwater | MEFIAFMIVGYFEISPGSCKVDYFRYNEVHSLVIPCQESGTLQRGSVGMLPSIKYSKQ |
Ga0211726_100975563 | 3300020161 | Freshwater | MIEMIAFAIVGYVELSPGQCKIDYFRYNEIHSLVIPCHENGTLQKGSVGMLPSITYSKP |
Ga0211726_104486065 | 3300020161 | Freshwater | MIEMIAFMIVGYVEVSPGQCQLDYLRYNEVHSLVIPCQENGTLLSGSVGMLQSIKYSKQ |
Ga0194134_100537495 | 3300020179 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQKGSVGMLPSIKYLKL |
Ga0194134_102326063 | 3300020179 | Freshwater Lake | MEFIAFLIIGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQKGSVGILPSIKYL |
Ga0194134_102618131 | 3300020179 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQKGSVGILPSIKYL |
Ga0194115_100567776 | 3300020183 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQKGSVGMIPSIKYLKP |
Ga0194115_100750844 | 3300020183 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQKGSVGMLPSIKYLKQ |
Ga0194115_101395605 | 3300020183 | Freshwater Lake | MEFIAFLIVGYVETSPGQCQLEYLRYNDIHSLVIPCHENGTLQRGSVGQLPSIK |
Ga0194115_102612562 | 3300020183 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYFRYNDIHSLVIPCHENGTLQKGSVGMLPSIKYLKP |
Ga0194115_103948522 | 3300020183 | Freshwater Lake | MEFIAFLIVGYVETSPGQCQLEYLKYNDIHSLVIPCHENGTLQRGSVGMIPSIKYL |
Ga0194118_101288731 | 3300020190 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYFRYNDIHSLVVPCHENGTLQRGSVGILPSIKYLKQ |
Ga0194118_102146552 | 3300020190 | Freshwater Lake | MEFIAFLIVGYVEISPGQCQLEYLRYNDIHSLVIPCHENGTLQKGSVGQLPSIKYLKP |
Ga0194118_102807431 | 3300020190 | Freshwater Lake | FLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQRGSVGMIPSIKYLKP |
Ga0194118_102980983 | 3300020190 | Freshwater Lake | MEFIAFLIVGYVETSPGQCQLEYLRYNDIHSLVIPCHENGTLQKGSVGQLPSIKYLKP |
Ga0194118_103413183 | 3300020190 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQRGSVGILPSIKYLKQ |
Ga0194131_100674147 | 3300020193 | Freshwater Lake | MEFIAFLIVGYVETSPGQCQLEYLRYNDIHSLVIPCHENGTLQRGSVGQLPSIKYLKP |
Ga0194128_104521702 | 3300020197 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQKGSVGVLPSIKYLK |
Ga0194120_101779123 | 3300020198 | Freshwater Lake | MEFIAFLIVGYVEISPGQCQLEYLRYNDIHSLVIPCHENGTLQRGSVGMIPSIKYLKQ |
Ga0194120_102904161 | 3300020198 | Freshwater Lake | EFIAFLIVGYVETSPGQCQLEYLRYNDIHSLVIPCHENGTLQKGSVGMLPSIKYLKQ |
Ga0194121_103568871 | 3300020200 | Freshwater Lake | MEFIAFLIVGYMEISPGQCQLEYLRYNDIHSLVIPCHENGTLQRGSVGMI |
Ga0194121_105140381 | 3300020200 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQKGSV |
Ga0194116_100633206 | 3300020204 | Freshwater Lake | MEFIAFLIVGYVEISPGQCKLEYFRYNDVHSLVIPCHENGTLQRGSVGMIPSIKYLKP |
Ga0194116_101919124 | 3300020204 | Freshwater Lake | MEFIAFLIVGYVETSPGQCQLEYLRYNDIHSLVIPCHENGTLQRGSVGQIPSINYLKQ |
Ga0194119_103687411 | 3300020220 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQRGSVGMIPSIKYLKQ |
Ga0194129_103114791 | 3300020578 | Freshwater Lake | EFIAFLIVGYVETSPGQCQLEYLRYNDIHSLVIPCHENGTLHRGSVGMIPSIKYLKP |
Ga0194133_100575041 | 3300021091 | Freshwater Lake | MGFIAFLIVGYVEVSPGQCQLEYFRYNEIHSLVVPCHENGTLQRGSVGMIPSIKYLKP |
Ga0194133_105167881 | 3300021091 | Freshwater Lake | EFIAFLIVGYVETSPGQCQLEYLRYNDIHSLVIPCHENGTLQRGSVGQLPSIKYLKP |
Ga0194122_103490391 | 3300021092 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYFRYNDIHSLVIPCHENGTLQKGSVGMLPSIKYL |
Ga0194123_104744271 | 3300021093 | Freshwater Lake | MEFIAFLIVGYVEISPGQCQLEYLRYNDIHSLVIPCHENGTLQRGSVGMLQSIKYSKQ |
Ga0194123_104796591 | 3300021093 | Freshwater Lake | MEFIAFLIVGYVEISPGQCQLEYLRYNDIHSLVVPCHENGTLQRGSVGILPSIKY |
Ga0194130_102096332 | 3300021376 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLHRGSVGMIPSIKYLKP |
Ga0194130_103506611 | 3300021376 | Freshwater Lake | EFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLQKGSVGMLPSIKYLKL |
Ga0194117_103589764 | 3300021424 | Freshwater Lake | MEFIAFLIVGYVEISPGQCQLEYLRYNDIHSLVIPCHENGTLQKGSVG |
Ga0194117_105565942 | 3300021424 | Freshwater Lake | MEFIAFLIVGYVEVGPDSCRLEYLRYNDIHSLVVPCHENGTLHRGSV |
Ga0222714_1000809110 | 3300021961 | Estuarine Water | MEFIAFLIVGYVEISPGSCRIDYLRYDDIHSLTIPCQENGTLQRGSVGMLQSFKYLKP |
Ga0222714_100979764 | 3300021961 | Estuarine Water | VIDLIAFMIVGYVEVGPGSCQVDYFRYNEVHSLVVPCQENGTPLKGSVGMLPSIKYFKL |
Ga0222714_104608092 | 3300021961 | Estuarine Water | MELIAFLIVGYAEISPGSCQLEYFRYNQIHSLVIPCHENGTLQKGSVGMLPSIKYSKP |
Ga0222713_105097751 | 3300021962 | Estuarine Water | MMELIAFMIVGYTEISPGQCQLEYLRYNDIHSLVIPCQENGTLQRGSV |
Ga0222712_1001465710 | 3300021963 | Estuarine Water | MIDLIAFMIVGYAEIGPGSCQIEYLRYNEVHSLVVPCQENGTLQKGSVGMLPSIKYSKQ |
Ga0222712_100345965 | 3300021963 | Estuarine Water | MIDLIAFMIIGYVEVSPGQCQIDYLRYNEVHSLVIPCQENGTLLKGSVGMLPSIKYSKQ |
Ga0208542_11173493 | 3300025818 | Aqueous | MELIAFLIVGYAEISPGSCQLEYFRYNDIHSLVIPCHENGTLQKGSVGMLPSIKYSKP |
Ga0255146_10701403 | 3300027396 | Freshwater | MIDLIAFMIVGYAEIGPGSCQIDYLRYNEIHSLVIPCQENGTPLSGSVGMLQSIKYSKP |
Ga0209668_111674321 | 3300027899 | Freshwater Lake Sediment | MEFIAFMIVGYAEISPGSCQIDYLRYNEVHSLVIPCHENGTLQKGSVGMLPSIK |
Ga0334980_0040069_289_465 | 3300033816 | Freshwater | MEFIAFMIVGSLEISPGQCQLEYFRYNEIHLLVVPCQENGTLQRGSVGMLQSTTYSKP |
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