Metagenome / Metatranscriptome Family F102827

Basic Information
Family ID	F102827
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	54 residues
Representative Sequence	IVVAVTSLNLWARQFAGYHDGTLSGIYLALVVAAATVTTVSAARGTRAALAEP
Number of Associated Samples	88
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	47.52 %
% of genes from short scaffolds (< 2000 bps)	49.50 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Unclassified (50.495 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.762 % of family members)
Environment Ontology (ENVO)	Unclassified (21.782 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.624 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01243	Putative_PNPOx	25.74
PF03466	LysR_substrate	13.86
PF01636	APH	10.89
PF07883	Cupin_2	4.95
PF01844	HNH	2.97
PF01988	VIT1	1.98
PF16859	TetR_C_11	0.99
PF02310	B12-binding	0.99
PF03129	HGTP_anticodon	0.99
PF08450	SGL	0.99
PF08281	Sigma70_r4_2	0.99
PF03795	YCII	0.99
PF10099	RskA	0.99
PF15919	HicB_lk_antitox	0.99
PF00072	Response_reg	0.99
PF13408	Zn_ribbon_recom	0.99
PF02687	FtsX	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	1.98
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	1.98
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.99
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.99
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.99
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.99
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.99
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.99
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
All Organisms	root	All Organisms	49.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
cellular organisms	root	All Organisms → cellular organisms	49.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.92 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.98 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.92 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.99 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.92 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.99 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.92 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.99 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_145981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1813	Open in IMG/M
3300001356\|JGI12269J14319_10172621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300001686\|C688J18823_10541136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	745	Open in IMG/M
3300005332\|Ga0066388_108343365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	516	Open in IMG/M
3300005436\|Ga0070713_101109865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	764	Open in IMG/M
3300005436\|Ga0070713_102023819	All Organisms → cellular organisms → Bacteria → Terrabacteria group	559	Open in IMG/M
3300005439\|Ga0070711_101882233	All Organisms → cellular organisms → Bacteria → Terrabacteria group	525	Open in IMG/M
3300006028\|Ga0070717_11910956	All Organisms → cellular organisms → Bacteria → Terrabacteria group	535	Open in IMG/M
3300006052\|Ga0075029_100436128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300006904\|Ga0075424_100702197	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1080	Open in IMG/M
3300009174\|Ga0105241_11583108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300009176\|Ga0105242_11070764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	818	Open in IMG/M
3300010043\|Ga0126380_10110988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1670	Open in IMG/M
3300010048\|Ga0126373_10616366	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300010876\|Ga0126361_10311831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300012199\|Ga0137383_10034799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3558	Open in IMG/M
3300012210\|Ga0137378_10522259	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1095	Open in IMG/M
3300012211\|Ga0137377_10617922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1020	Open in IMG/M
3300012362\|Ga0137361_10548432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1061	Open in IMG/M
3300012492\|Ga0157335_1035826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	540	Open in IMG/M
3300012513\|Ga0157326_1060565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300012515\|Ga0157338_1040218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	634	Open in IMG/M
3300012882\|Ga0157304_1096811	Not Available	532	Open in IMG/M
3300013100\|Ga0157373_10670294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	758	Open in IMG/M
3300016371\|Ga0182034_11708511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300021478\|Ga0210402_10233082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1697	Open in IMG/M
3300021479\|Ga0210410_11477914	All Organisms → cellular organisms → Bacteria → Terrabacteria group	572	Open in IMG/M
3300021860\|Ga0213851_1468102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300024283\|Ga0247670_1110418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300024347\|Ga0179591_1165269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3511	Open in IMG/M
3300025898\|Ga0207692_10200342	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1173	Open in IMG/M
3300025928\|Ga0207700_11926941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300025929\|Ga0207664_11155533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300025938\|Ga0207704_10348207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1153	Open in IMG/M
3300027371\|Ga0209418_1087617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300027854\|Ga0209517_10405284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300027855\|Ga0209693_10274325	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300027898\|Ga0209067_10748520	Not Available	568	Open in IMG/M
3300028708\|Ga0307295_10197895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300030707\|Ga0310038_10292828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300031170\|Ga0307498_10466224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300031572\|Ga0318515_10686512	All Organisms → cellular organisms → Bacteria → Terrabacteria group	542	Open in IMG/M
3300031713\|Ga0318496_10393051	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300031744\|Ga0306918_11243669	Not Available	574	Open in IMG/M
3300031820\|Ga0307473_10532484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799	Open in IMG/M
3300031821\|Ga0318567_10009098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4490	Open in IMG/M
3300031821\|Ga0318567_10659153	All Organisms → cellular organisms → Bacteria → Terrabacteria group	594	Open in IMG/M
3300031845\|Ga0318511_10127814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1099	Open in IMG/M
3300031846\|Ga0318512_10020620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2711	Open in IMG/M
3300031859\|Ga0318527_10327551	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300031942\|Ga0310916_11183052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300032039\|Ga0318559_10244037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	830	Open in IMG/M
3300032090\|Ga0318518_10354803	Not Available	753	Open in IMG/M
3300032897\|Ga0335071_10560908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1094	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.12%
Host-Associated	Host-Associated	11.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.15%
Plants	Host-Associated → Plants	11.88%
Aquatic	Environmental → Aquatic	2.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.95%
Peat	Environmental → Terrestrial → Peat	3.96%
Sediment	Environmental → Aquatic → Sediment	1.98%
Freshwater	Environmental → Aquatic → Freshwater	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.40%
Loam	Environmental → Terrestrial → Soil → Loam	17.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.95%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.96%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.97%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.98%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_02674100	2199352024	Soil	MTVAAVAIVIAVTSLDLWARQFAGYHDGTLSGIYLALVVATATVTTVSATRGTRAALAHP
INPhiseqgaiiFebDRAFT_1056884051	3300000364	Soil	LWARQFAGYHDATLSGIYLALVVATATVTTVSATRGTRAALAQRSAP*
JGI12269J14319_101726212	3300001356	Peatlands Soil	GVAAAVMAVAAVAIVVAVIGLCLWEHHFAGYHHGTIPGVYLALVVAATTVTTVSAARGTRAALAES*
C688J18823_105411362	3300001686	Soil	VAIVVAVTGLCLWVPAFAGYHSAMIPAIYLALVIVAATVTTVSAVRGTRAARSL*
Ga0066679_101566153	3300005176	Soil	SLNLWARQFAGYHDGALSGLYLALVVIAATVTTVSAARGTRAALAVSP*
Ga0066388_1083433652	3300005332	Tropical Forest Soil	VAIVVAVISLNLWARQFAGYHDGTGSGIYLALVVAAATVTTMSAARGTRAALVQP*
Ga0070713_1010638572	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GLCLWARSFAGYHHPAIPAIYLALVAAATTVTTVSATRGARAARAQA*
Ga0070713_1011098652	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TAAGVSAWVMTVAAVAIVITVTSLDLWARQFAGYHDVTLSGIYLALVVATATVTTVSATRGTRAALARRSAP*
Ga0070713_1015806252	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DLWARQFAGYHDSTLSGIYLALVVAAAAVTTVSATRGTRAALAQP*
Ga0070713_1019978372	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GLCLWARSFAGYHHPAIPAIYLALVAAATTVTTVSATRGVRAARAQA*
Ga0070713_1020238191	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AIVVAVTSLNLWARQFPGYHDGTLSGIYLALVVTAATVTTVSAARGTRAALVQP*
Ga0070701_105751793	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LNLWARQFAGYHHATVSGIYLALVVATATVTTVSATRGTRAALAQRSAP*
Ga0070711_1010129522	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	CLWARSFAGYHHPTIPAIYLALVAAATIVTTVSAGRGVRAARAKA*
Ga0070711_1018822331	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VAIVVAVTSLNLWARQFAGYHDGTLSGIYLALVVTAATVTTVSAARGTRAALAHP*
Ga0070663_1010040291	3300005455	Corn Rhizosphere	TSLDLWARQFAGYHDATLSGIYLALVVATATVTTVSATRGTRAALAQRSAP*
Ga0066692_108729192	3300005555	Soil	SLNLWARQFAGYHDGTLSGIYLALVVTAATVTTVSAARGTRAALALSP*
Ga0070717_119109562	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VAAVAIVVAVTSLNLWARQFAGYHDGTLSGIYLALVVTAATVTTVSAARGTRAALAHP*
Ga0075029_1004361281	3300006052	Watersheds	AAVMAVAAVAIVVAVVGLCLWEHHFVGYHHGTILGVYLALVVAATAVTTVSAARGTRAALAEP*
Ga0079221_109576501	3300006804	Agricultural Soil	LWARQFAGYHDSTLSGIYLALVVATATVTTVSATRGTRAALAQP*
Ga0075424_1007021972	3300006904	Populus Rhizosphere	AAVAIVVAVTSLNLWARQFAGYHDGTLSGIYLALVVTAATVTTVSAARGTRAALALSP*
Ga0105241_115831081	3300009174	Corn Rhizosphere	VSAGVMAVAAVAIVIAVTSLDLWARQFAGYHDATLSGIYLALVVATATVTTVSATRGTRVALAQRSAP*
Ga0105242_110707643	3300009176	Miscanthus Rhizosphere	VMAVAAVAIVITVTSLDLWARQFAGYHDATLSGIYLALVVATATVTTVSATRGTRAALAQRSAP*
Ga0126380_101109884	3300010043	Tropical Forest Soil	IVVAVISLSLWASEFVGYHDGTVSGIYLALVVTAATVTTVSAARGTRAALAHP*
Ga0126373_106163661	3300010048	Tropical Forest Soil	AVAIVVAVTSLTLWARPFAGYHDGAVPGIYLALVVTAATVTTVSAARGTRAAQ*
Ga0126373_116967061	3300010048	Tropical Forest Soil	TSLNLWARQFAGYHDGTVSGIYLALVVTAATVTTVSAARGTRAALAHP*
Ga0134109_100826131	3300010320	Grasslands Soil	LDLWARQFVGYHDGTLSGIYLTLVVAAATVTMVSTARGTRAALAHP*
Ga0126381_1022443631	3300010376	Tropical Forest Soil	SLWARHFAGSHHSTVLAIYLALVVASAAITTVSAARGTRAALAEP*
Ga0126361_103118311	3300010876	Boreal Forest Soil	SLCLWARGFAGYHHSTIPVIYLLLVVAAATVTTVSAVRGTRAALATPAGLEGSGNSL*
Ga0150983_132815062	3300011120	Forest Soil	SLNLWARQFAGYHDGTLSGIYLALVVTAATVTTVSAARGTRAALAVSP*
Ga0137383_100347991	3300012199	Vadose Zone Soil	IVVAVTSLNLWARQFAGYHDGTLSGIYLALVLGAATVTTVSAARGTRAALTQP*
Ga0137378_105222594	3300012210	Vadose Zone Soil	AAVAIVVAVTSLNLWARQFAGYHDGTLSGIYLALVLGAATVTTVSAARGTRAALTQP*
Ga0137377_104044341	3300012211	Vadose Zone Soil	VTSLNLWARQFAGYHDGTLSGIYLALVVTAATVTTVSAARGTRAALAHP*
Ga0137377_106179221	3300012211	Vadose Zone Soil	AAAIVIAVIGLCLWARQFAGYHHGTVPGIYLALVVATATITTVSAARGARAALAEP*
Ga0137386_108245122	3300012351	Vadose Zone Soil	LWARQFAGYHDGTLSGIYLALVVAAATVTTVSAARGTRAALAHP*
Ga0137384_102274124	3300012357	Vadose Zone Soil	LCLWARQFAGYHHGTVPGIYLALVVATATITTVSAARGARAALAEP*
Ga0137384_110310062	3300012357	Vadose Zone Soil	VAVTGLCLWARPFAGYHHGTIPAIYLALVMAAATVTTVSAARGARAARADA*
Ga0137361_105484323	3300012362	Vadose Zone Soil	AVASAAIVAAVISLCLWAHQFAGYHHVTGPGIYLVLVVAAATVTTVSAARGTRTALEEP*
Ga0157335_10358261	3300012492	Arabidopsis Rhizosphere	GVSAGVMAVAAMAIVIAVTSLDLWARQFVGYHHATVSGIYLALVVATATVTTVSATRGTRAALAQRSAP*
Ga0157326_10605652	3300012513	Arabidopsis Rhizosphere	AAMAIVIAVTSLDLWARQFVGYHHATVSGIYLALVVATATVTTVSATRSTRAALAQRSAP
Ga0157338_10402183	3300012515	Arabidopsis Rhizosphere	VAAVAIVITVTSLDLWARQFAGYHHATVSGIYLALVVATATVTTVSATRGTRAALAQRPAP*
Ga0157304_10968111	3300012882	Soil	AIVITVTSLDLWSRQFAGYHDATLSGIYLALVVATATGTTVSATRGTRAALAQRPAP*
Ga0164304_116130682	3300012986	Soil	LNLWARQFVGYHDGTLSGIYLALVVIAATVTTVSAARGTRAALAVSP*
Ga0157373_106702943	3300013100	Corn Rhizosphere	VMAVAAMAIVIAVTSLDLWARQFAGYHHATVSGIYLALVVATATVTTVSATRGTRVALAQRSAP*
Ga0157376_131160011	3300014969	Miscanthus Rhizosphere	NLWARQFPGYHDGTLSGIYLALVVTAATVTTVSAARGTRAALAQP*
Ga0182034_117085112	3300016371	Soil	AVAAVAIVVAVTSLTLWARPFAGYHDGAVPAIYLALVVTAATVTTVSTARGIRAAR
Ga0187781_108631591	3300017972	Tropical Peatland	EVIWCLWARQWSGYDNFTTPGIYLVMVIAAASATTLSAARGARAALAEP
Ga0210385_101916513	3300021402	Soil	GLCLWARDFAGYHHGTIPGIYLALVVVAATVTTVSAARGTRAALVEP
Ga0210385_106235822	3300021402	Soil	LCLWARGFAGYHHATVPGVYLALVVVAAAVTAVSAARGTRAALPEPEG
Ga0210402_102330823	3300021478	Soil	AAVAIVVAVISLNLWARQFAGYHDGTLSGIYLALVVTAATVTTVSAARGTRAALAVSP
Ga0210410_114779142	3300021479	Soil	VAAVAIVVAVTSLNLWARQFAGYHDGTLSGIYLALVVTAATVTTVSAARGTRAALAQP
Ga0126371_108489373	3300021560	Tropical Forest Soil	GLNLWARQFAGYHDGTVSGIYLALVVTAATVTTVSAARGTRAALARP
Ga0213851_14681022	3300021860	Watersheds	AGVDVVVAVVGLCLWARDFAGYHHGTIPGIYLALVIVAATVTTVSAARGTRAALAEP
Ga0247670_11104181	3300024283	Soil	VMAVAAIAIVIAVTSLDLWARQFAGYHHATVSGIYLALVVATATVTTVSATRGTRAALAQRSAP
Ga0179591_11652696	3300024347	Vadose Zone Soil	MAVAAVAIVVAVTSLNLWARQFIGYHDGTLSGIYLALVVAAATVTTVSAARGTRAALARP
Ga0207692_102003421	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AVAIVVAVVSLNLWARQFAGYHDGALSGLYLALVVIAATVTTVSAARGTRAALAVSP
Ga0207647_107085112	3300025904	Corn Rhizosphere	VTSLDLWARQFAGYHHATLSGIYLALVVATATVTTVSATRGTRAALAQRSAP
Ga0207663_108020141	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	IGVAVTGLCLWARSFAGYHHPTIPAIYLALVAAATIVTTVSAGRGVRAARAKA
Ga0207700_119269411	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TAAGVSAWVMTVAAVAIVITVTSLDLWARQFAGYHDVTLSGIYLALVVATATVTTVSATRGTRAALARRSAP
Ga0207664_111555332	3300025929	Agricultural Soil	AGVSAWVMTVAAVAIVITVTSLDLWARQFAGYHDATLSGIYLALVVATATVTTVSATRGTRAALARRSAP
Ga0207704_103482071	3300025938	Miscanthus Rhizosphere	GVMAVAAVAIVITVTSLDLWARQFAGYHHATVSGIYLALVVATATVTTVSATRGTRAALAQRSAP
Ga0209418_10876172	3300027371	Forest Soil	MAVAAIAIVIAVTSLDLWARQFAGYHHAMVSGIYLALVVATATVTTVSATRGTRAALAQRSAP
Ga0209177_104407482	3300027775	Agricultural Soil	TSLDLWARQFAGYHHATVSGIYLALVVATATVTTVSATRGTRAALAQRSAP
Ga0209517_104052841	3300027854	Peatlands Soil	IVVAVIGLCLWEHHFAGYHHGTIPGVYLALVVAATTVTTVSAARGTRAALAES
Ga0209693_102743252	3300027855	Soil	VVAVTSLNLWARQFAGYHHGALSGVYLALVVTAATVTTVSAARGTRAALAVSP
Ga0209067_107485202	3300027898	Watersheds	IVVAVTSLNLWARQFAGYHDGTLSGIYLALVVAAATVTTVSAARGTRAALAEP
Ga0268266_112954793	3300028379	Switchgrass Rhizosphere	DLWARQFAGYHHATVSGIYLALVVATATVTTVSATRGTRAALAQRSAP
Ga0307295_101978951	3300028708	Soil	SAWVMTVAAVAIVITVTSLDLWARQFAGYHDAALSGIYLALVVATATVTTVSATRGTRAALAQP
Ga0307296_103187701	3300028819	Soil	NLWARQFAGYHDGTLSGIYLALVVATATVTAVSATRGTRAALAQP
Ga0311340_106893111	3300029943	Palsa	VAVVGLCLWAPSFAGYHDVTVPGIYLILVVAAAAVTAVSAARGTRAAFAKPGSRHT
Ga0311355_102921303	3300030580	Palsa	WARGFAGYHHVTSPAVYLVLVLAAATVTSVSALRGTRAALTEPAAG
Ga0311355_110839712	3300030580	Palsa	AAAMAVAVVILCLWARRFSYYHNFTTPGIYLALVAVAASVTTVSAARGARVALAKP
Ga0311354_116906312	3300030618	Palsa	LCLWAPSFAGYHDVTVPGIYLILVVAAAAVTAVSAARGTRAAFAKPGSRHT
Ga0316363_104108941	3300030659	Peatlands Soil	IGLCLWEHHFAGYHHGTIPGVYLALVVAATTVTTVSAARGTRAALAES
Ga0310038_102928281	3300030707	Peatlands Soil	VMAVAAVAIVVAVIGLCLWEHHFAGYHHGTIPGVYLALVVAATTVTTVSAARGTRAALAE
Ga0307498_104662242	3300031170	Soil	VAAVGIVIAVTSLDLWARQFAGYHDGTLPGIYLALVVATATVTTVSATRGTRAALAHP
Ga0318515_104516782	3300031572	Soil	LNLWARNFAGYHDGTVSGIYLALVVTAATVTTVSAARGTRAALAQP
Ga0318515_106865121	3300031572	Soil	VAVTSLSLWTRPFAGYHHGTVSAIYLTLVVTAATVTMVSAARGTRAALAQP
Ga0318574_102968852	3300031680	Soil	GLCLWARGFAGYHDATLPGVYLSLVLAAAAVTAVSAARGTRAAFAEQAGWPAP
Ga0318496_103930512	3300031713	Soil	VMAVAAVAIVVAVISLDLWARQFAGYHDGIVPGIYLALVVTATAVTTVSARRGARAALAQ
Ga0307469_114958111	3300031720	Hardwood Forest Soil	LNLWARQFAGYHDATLSGIYLALVVATATVTTVSATRGTRAALAQRSAP
Ga0307469_120205012	3300031720	Hardwood Forest Soil	GLCLWARGFAVYHHATIPGIYLALVAVAAAVTAVSAARGTRAALPEPEHGHGRG
Ga0318493_106876562	3300031723	Soil	TGLGLWARGFAGYHDGTIPGVYLTLIVVAAAVTAVSAARGARAALAEHG
Ga0318501_106060932	3300031736	Soil	LWARNFAGYHDGTVSGIYLALVVTAATVTTVSAARGTRAALAQP
Ga0306918_112436692	3300031744	Soil	SAAVLAVAAVAIVVAVIRLDLWARQFAGYHDGIVPGIYLALVVTATAVTTVSARRGARAALAQP
Ga0318554_106166731	3300031765	Soil	LWARGFAGYHDATLPGVYLSLVLAAAAVTAVSAARGTRAAFAEQAGWPAP
Ga0318552_101259751	3300031782	Soil	LNLWARQFAGYHDGTLSGIYLALVVTAAAVTTVSAARGTRAALAQP
Ga0318550_104994661	3300031797	Soil	VTSLTLWARPFAGYHDGAVPGIYLALVVTAATATTVSAVRGIRAAR
Ga0307473_105324841	3300031820	Hardwood Forest Soil	IAVTSLNLWARQFAGYHDATLSGIYLALVVATATVTTVSATRGTRAALAQRSAP
Ga0318567_100090984	3300031821	Soil	MAMAAVAIVAAVTSLNLWARNFAGYHDGTVSGIYLALVVTAATVTTVSAARGTRAALAQP
Ga0318567_106591532	3300031821	Soil	GVSAGIMVVAAAAIVVAVTSLSLWTRPFAGYHHGTVSAIYLTLVVTAATVTMVSAARGTRAALAQP
Ga0318511_101278143	3300031845	Soil	AIVAAVTSLNLWARNFAGYHDGTVSGIYLALVVTAATVTTVSAARGTRAALAQP
Ga0318512_100206205	3300031846	Soil	AGLAPVAIVVTVTSLNLWARQFAGYHDGTLSGIYLALVVTAAAVTTVSAARGTRAALAQP
Ga0318527_103275512	3300031859	Soil	AVAIVVAVISLDLWARQFAGYHDGIVPGIYLALVVTATAVTTVSARRGARAALAQP
Ga0310916_111830521	3300031942	Soil	AVAAVAIVVAVTSLTLWARPFAGYHDGAVPGIYLALVVTAATVTTVSAARGIRAAR
Ga0306926_115320111	3300031954	Soil	VTGLCLWARGFAGYHHGAIPGVYLALVVVAAAVTAVSAARGTRAALAEVR
Ga0318569_105199881	3300032010	Soil	LWARGFVGYHVATLPGVYLSLVLAAAAVTAVSAARGTRAAFAEQAGWPAP
Ga0318559_102440372	3300032039	Soil	ATAAIVAAVTSLNLWARNFAGYHDGTVSGIYLALVVTAATVTTVSAARGTRAALAQP
Ga0318524_101814721	3300032067	Soil	CLWARHFAGYHHSTVPAIYLALVAAAATVTTVSAARGTRAALQTRA
Ga0318518_103548032	3300032090	Soil	MAVAAVAIVVTVTSLNLWARQFAGYHDGTLSGIYLALVVTAAAVTTVSAARGTRAALAQP
Ga0335079_101513082	3300032783	Soil	LPRSVRARQFSDYHNFTTPGIYVALVVTAATVTTVSAARGTRAALA
Ga0335071_105609081	3300032897	Soil	SAAVMAVAAVAIVIAVTILNLWGLKFLGYHDGIVSGVYLTLVITAATVTTVSAARGTRAALAQP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102827

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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