NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F102590

Metagenome Family F102590

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F102590
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 84 residues
Representative Sequence MKTHTPGPWRQTGINVRAGDALICYAMNHHANAETPEPEKLANARLISLAPQMLLALERLAHPMADDEDLDYAREIIAKAKGQ
Number of Associated Samples 65
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 39.60 %
% of genes near scaffold ends (potentially truncated) 27.72 %
% of genes from short scaffolds (< 2000 bps) 56.44 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (74.257 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater
(23.762 % of family members)
Environment Ontology (ENVO) Unclassified
(48.515 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(51.485 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 44.58%    β-sheet: 12.05%    Coil/Unstructured: 43.37%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF01464SLT 41.58
PF02511Thy1 1.98
PF07728AAA_5 0.99
PF00145DNA_methylase 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 1.98
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 0.99


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A74.26 %
All OrganismsrootAll Organisms25.74 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002835|B570J40625_101236085All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300003277|JGI25908J49247_10082672Not Available790Open in IMG/M
3300003413|JGI25922J50271_10007351All Organisms → cellular organisms → Bacteria3052Open in IMG/M
3300004481|Ga0069718_16012371Not Available1008Open in IMG/M
3300005527|Ga0068876_10415128Not Available749Open in IMG/M
3300005581|Ga0049081_10018609Not Available2634Open in IMG/M
3300005805|Ga0079957_1002945All Organisms → cellular organisms → Bacteria14696Open in IMG/M
3300007363|Ga0075458_10234688Not Available560Open in IMG/M
3300007734|Ga0104986_1911All Organisms → cellular organisms → Bacteria44980Open in IMG/M
3300008055|Ga0108970_10023826All Organisms → cellular organisms → Bacteria → Terrabacteria group10198Open in IMG/M
3300008055|Ga0108970_10024009Not Available9747Open in IMG/M
3300008117|Ga0114351_1012171Not Available6031Open in IMG/M
3300008259|Ga0114841_1011364Not Available5278Open in IMG/M
3300008259|Ga0114841_1037388All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2449Open in IMG/M
3300008259|Ga0114841_1074632All Organisms → Viruses → Predicted Viral3128Open in IMG/M
3300008266|Ga0114363_1006555Not Available5808Open in IMG/M
3300008266|Ga0114363_1027744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar34371Open in IMG/M
3300008266|Ga0114363_1123732Not Available895Open in IMG/M
3300008267|Ga0114364_1007927Not Available5118Open in IMG/M
3300008267|Ga0114364_1012607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar33787Open in IMG/M
3300008267|Ga0114364_1029011Not Available2188Open in IMG/M
3300008267|Ga0114364_1032451Not Available2032Open in IMG/M
3300008448|Ga0114876_1156934Not Available822Open in IMG/M
3300008450|Ga0114880_1046483All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1854Open in IMG/M
3300008450|Ga0114880_1076616Not Available1345Open in IMG/M
3300008450|Ga0114880_1087759Not Available1228Open in IMG/M
3300009081|Ga0105098_10009886Not Available3500Open in IMG/M
3300009085|Ga0105103_10349896Not Available812Open in IMG/M
3300009168|Ga0105104_10187995Not Available1121Open in IMG/M
3300010370|Ga0129336_10068395All Organisms → Viruses → Predicted Viral2105Open in IMG/M
3300011268|Ga0151620_1164122Not Available679Open in IMG/M
3300013372|Ga0177922_10168140Not Available706Open in IMG/M
3300017707|Ga0181363_1008085All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2203Open in IMG/M
3300017707|Ga0181363_1044847Not Available804Open in IMG/M
3300017723|Ga0181362_1082323Not Available649Open in IMG/M
3300017747|Ga0181352_1016987Not Available2284Open in IMG/M
3300017747|Ga0181352_1062361Not Available1065Open in IMG/M
3300017754|Ga0181344_1008405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA1023375Open in IMG/M
3300017754|Ga0181344_1165681Not Available628Open in IMG/M
3300017778|Ga0181349_1309388Not Available510Open in IMG/M
3300017784|Ga0181348_1226822Not Available657Open in IMG/M
3300017785|Ga0181355_1090062Not Available1276Open in IMG/M
3300017785|Ga0181355_1229845Not Available718Open in IMG/M
3300017785|Ga0181355_1312082Not Available587Open in IMG/M
3300019783|Ga0181361_112098Not Available673Open in IMG/M
3300020159|Ga0211734_10221161Not Available1096Open in IMG/M
3300020172|Ga0211729_11037303All Organisms → cellular organisms → Bacteria2188Open in IMG/M
3300020530|Ga0208235_1042385Not Available533Open in IMG/M
3300021961|Ga0222714_10001553Not Available25753Open in IMG/M
3300021962|Ga0222713_10252962Not Available1147Open in IMG/M
3300021962|Ga0222713_10545851Not Available685Open in IMG/M
3300022173|Ga0181337_1027952Not Available754Open in IMG/M
3300022179|Ga0181353_1033013Not Available1372Open in IMG/M
3300022179|Ga0181353_1092558Not Available751Open in IMG/M
3300022190|Ga0181354_1241168Not Available519Open in IMG/M
3300022407|Ga0181351_1008218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA1024156Open in IMG/M
3300027126|Ga0255098_1027612Not Available914Open in IMG/M
3300027127|Ga0255071_1007172Not Available1903Open in IMG/M
3300027139|Ga0255082_1039613Not Available748Open in IMG/M
3300027156|Ga0255078_1016766All Organisms → cellular organisms → Bacteria1650Open in IMG/M
3300027302|Ga0255096_1012016All Organisms → cellular organisms → Bacteria2102Open in IMG/M
3300027486|Ga0255086_1002541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar34480Open in IMG/M
3300027508|Ga0255072_1014990Not Available1654Open in IMG/M
3300027579|Ga0255068_103921Not Available1943Open in IMG/M
3300027743|Ga0209593_10122571Not Available945Open in IMG/M
3300027956|Ga0209820_1195061Not Available565Open in IMG/M
3300031758|Ga0315907_10006826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar312002Open in IMG/M
3300031758|Ga0315907_10063130All Organisms → Viruses → Predicted Viral3226Open in IMG/M
3300031758|Ga0315907_10068094Not Available3090Open in IMG/M
3300031758|Ga0315907_10274114Not Available1393Open in IMG/M
3300031758|Ga0315907_10468812Not Available1002Open in IMG/M
3300031758|Ga0315907_11136983Not Available552Open in IMG/M
3300031787|Ga0315900_10123335Not Available2462Open in IMG/M
3300031787|Ga0315900_10166345All Organisms → Viruses → Predicted Viral2011Open in IMG/M
3300031787|Ga0315900_10815560Not Available641Open in IMG/M
3300031857|Ga0315909_10034272Not Available4878Open in IMG/M
3300031857|Ga0315909_10094616All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium2594Open in IMG/M
3300031857|Ga0315909_10103466Not Available2447Open in IMG/M
3300031857|Ga0315909_10154883All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1880Open in IMG/M
3300031857|Ga0315909_10758736Not Available620Open in IMG/M
3300031951|Ga0315904_10041904Not Available5200Open in IMG/M
3300031951|Ga0315904_10160457All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2262Open in IMG/M
3300031951|Ga0315904_10270806Not Available1611Open in IMG/M
3300031963|Ga0315901_10304679Not Available1318Open in IMG/M
3300032050|Ga0315906_10120656All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium2579Open in IMG/M
3300032050|Ga0315906_10302362Not Available1440Open in IMG/M
3300032050|Ga0315906_11041112Not Available611Open in IMG/M
3300032093|Ga0315902_10426863Not Available1186Open in IMG/M
3300032116|Ga0315903_10120958Not Available2457Open in IMG/M
3300032116|Ga0315903_10392054Not Available1134Open in IMG/M
3300033816|Ga0334980_0123529Not Available1069Open in IMG/M
3300033981|Ga0334982_0219118Not Available931Open in IMG/M
3300033993|Ga0334994_0143147Not Available1353Open in IMG/M
3300034061|Ga0334987_0033494All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4445Open in IMG/M
3300034061|Ga0334987_0090205Not Available2389Open in IMG/M
3300034061|Ga0334987_0103137Not Available2189Open in IMG/M
3300034102|Ga0335029_0092281Not Available2149Open in IMG/M
3300034102|Ga0335029_0262099Not Available1111Open in IMG/M
3300034106|Ga0335036_0026056Not Available4639Open in IMG/M
3300034111|Ga0335063_0072639Not Available2129Open in IMG/M
3300034280|Ga0334997_0917932Not Available520Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater23.76%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake20.79%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater10.89%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton10.89%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater7.92%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment4.95%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.96%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater3.96%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.97%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater1.98%
EstuaryHost-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary1.98%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.99%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic0.99%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.99%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.99%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.99%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003413Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DDEnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300007734Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015JanEnvironmentalOpen in IMG/M
3300008055Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393Host-AssociatedOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008259Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300011268Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555EnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017707Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.NEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019783Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020530Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022173Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM15.D.DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300027126Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepC_8dEnvironmentalOpen in IMG/M
3300027127Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepC_8hEnvironmentalOpen in IMG/M
3300027139Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8hEnvironmentalOpen in IMG/M
3300027156Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8hEnvironmentalOpen in IMG/M
3300027302Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8dEnvironmentalOpen in IMG/M
3300027486Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_8dEnvironmentalOpen in IMG/M
3300027508Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8hEnvironmentalOpen in IMG/M
3300027579Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_8hEnvironmentalOpen in IMG/M
3300027743Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027956Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300033816Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005EnvironmentalOpen in IMG/M
3300033981Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011EnvironmentalOpen in IMG/M
3300033993Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034111Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186EnvironmentalOpen in IMG/M
3300034280Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
B570J40625_10123608513300002835FreshwaterMKTHTPGPWRTTGLNVRAGDALICYATNHWADDETPESERQANADLIASAPDLLSALERLVHPMADDEDLDYAREIIAKAKGQL*
JGI25908J49247_1008267223300003277Freshwater LakeVSHTPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDDDLDYARAIIRKAKGQQP*
JGI25922J50271_1000735163300003413Freshwater LakeMKTHTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISIAPQMLLALERLAHPMADDDDLDYAREIIAKAKGQL*
Ga0069718_1601237123300004481SedimentVKTTHTPGPWRQTGINVRAGDALICYAMNHHANAETPEPEKLANARLISLAPQMLLALEHLAHPMADDEDLDYARGIIAKAKGLQ*
Ga0068876_1041512833300005527Freshwater LakeMRTEQFTPGPWRTTGINVRAGDALICWATNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSFARDCIANARGK*
Ga0049081_1001860953300005581Freshwater LenticMRTEQFTPGPWRTTGINVRAGDALICYATNHHANAETPEPEKLANARLIAAAPDLLLALQRLTHPMADDEDLSFARDTIANARGK*
Ga0079957_1002945133300005805LakeMKTQFTPGPWRTTGLNVRAGDTLICYAMNHHANAETPEHEKMANARLISLAPQMLLALQRLTHPMADDEDLDYAREVIAKAKGLQ*
Ga0075458_1023468823300007363AqueousMKATHTPGPWRQTGPNVRAGDALICYAMNHHANAETPEPEKLANARLISCAPQMLIALQRLTHPMADDDDLDYAREVIAKAKGLQ*
Ga0104986_1911533300007734FreshwaterMKPQHTPGPWRQTGPNVRAGDALICYATNHHANAETPESEKLANARLISLAPQMLLALERLAHPMADDEDLDYAREVIAKAKGL*
Ga0108970_1002382683300008055EstuaryMKPQFTPGPWRTTGLNVRADDALVCYATNHWANYETPESERQANANLIASAPDLLAALERLTHPMADDEDLAYAREVIRKARGLAVKSHE*
Ga0108970_10024009173300008055EstuaryMKTHTPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDEDLDYAREVIAKAKGQQ*
Ga0114351_101217193300008117Freshwater, PlanktonMKTQFTPGPWRTTGLNVRAGDALICYAMNHHANAETPEHEKMANARLISLAPQMLLALQRLTHPMADDEDLDYAREVIAKAKGLQ*
Ga0114841_101136463300008259Freshwater, PlanktonMRTEQFTPGPWRTTGVNVRAGDALICWATNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSFARDCIANARGK*
Ga0114841_103738883300008259Freshwater, PlanktonMKTHTPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLIACAPQMLLALERLTHPMADDEDLDYAREVIAKAKGNE*
Ga0114841_107463273300008259Freshwater, PlanktonMRTEQFTPGPWRTTGINVRAGDALICWATNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADHEDLSFARDCIANARGK*
Ga0114363_1006555133300008266Freshwater, PlanktonVKSEFTPGPWRTTATNVRAGDALICYATNHHANAETPEHEKLANARLIAAAPDLLLALERLVHPMADDEDLSFARDCIANARGK*
Ga0114363_102774423300008266Freshwater, PlanktonMKTHTPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDDDLDYAREIIKKAKGQP*
Ga0114363_112373253300008266Freshwater, PlanktonTPGPWRTTGINVRAGDALICYAMNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSFARDCIANARGK*
Ga0114364_100792753300008267Freshwater, PlanktonVKSEFTPGPWRTTGINVRAGDALICYAMNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSFARDCIANARGK*
Ga0114364_101260743300008267Freshwater, PlanktonMKTHTPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDEDLDYAREIIAKAKGQL*
Ga0114364_102901133300008267Freshwater, PlanktonMRTEQFTPGPWRTTGINVRAGDALICYATNHHANAETPEPEKLANARLISCAPQMLLALQRLTHPMADDDDLDYAREVITKAKGGA*
Ga0114364_103245163300008267Freshwater, PlanktonMKATHTPGPWRQTGINVRAGDALICYAMNHHANAETPEPEKLANARLIACAPQMLLALQRLTHPMADDEDLDYAREVIARAKGQQ*
Ga0114876_115693433300008448Freshwater LakeMRTEQFTPGPWRTTGINVRAGDALICWATNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSFARDTIANARGK*
Ga0114880_104648313300008450Freshwater LakeRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDDDLDYAREIIKKAKGQP*
Ga0114880_107661643300008450Freshwater LakeMRTEQFTPGPWRTTGTNVRAGDALICYAMNHHANAETPEHEKLANARLIAAAPDLLLALERLVHPMADDEDLSYARDCIANARGK*
Ga0114880_108775943300008450Freshwater LakeVKSEFTPGPWRTTGINVRAGDALICYAMNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSFARDCIANA
Ga0105098_1000988683300009081Freshwater SedimentMKTHTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISLAPEMLLALERLVHPMADDDDLDYAREVIRKAKGGGQP*
Ga0105103_1034989613300009085Freshwater SedimentMKTHTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISLAPEMLLALERLAHPMADDDDLDYAREVIAKAKGLTVKSHE*
Ga0105104_1018799543300009168Freshwater SedimentMKTHTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISLAPQMLLALERLAHPMADDDDLDYAREVIAKAKGLTVKSHE*
Ga0129336_1006839553300010370Freshwater To Marine Saline GradientMKTQFTPGPWRTTGRNVRAGDALICFATDHWYAEDDGFYAFTDPAEKQANATLISCAPDLLSALERLVHPMADDGDLDYAREVIAKAKGQL*
Ga0151620_116412213300011268FreshwaterMKSQFTPGPWRTTGLNVRAGDALICYATNHWADYKTPESERQANADLIASAPDLLSALERLTHPMADDDDLDFARAIIIKRAEAGIGSKRYLPA*
Ga0177922_1016814023300013372FreshwaterLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDDDLDYARAIIAKAKGQP*
Ga0181363_100808543300017707Freshwater LakeMKTHTPGPWRTTGLNVRAGDALICYATNHWADDETPESERQANADLISSAPDLLSALERLVHPMADDDDLDYAREIIEKAKGGQ
Ga0181363_104484723300017707Freshwater LakeMKSQFTPGPWRTTGLNVRAGDALICYATNHWADCKTPESERQANADLIASAPDLLSALERLVHPMADDEDLDYAREIIAKAKGN
Ga0181362_108232323300017723Freshwater LakeVSHTPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDEDLDFARAIIAKAKGL
Ga0181352_101698773300017747Freshwater LakeMKTHTPGPWRTTGLNVRAGDALICFATDHWYAEDDGFYAFTDPAEKQANATLISCAPELLAALERLVHPMADDEDLDYARAIIAKAKGN
Ga0181352_106236113300017747Freshwater LakePKTLTIEIKHPMKTQFTPGPWRTTGLNVRAGDALICYATNHWADDETPESERQANADLIASAPDLLSALERLVHPMADDDDLDYAREVIAKARGV
Ga0181344_100840513300017754Freshwater LakeMKTHTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISIAPQMLLALERLAHPMADDDDLDYAREI
Ga0181344_116568123300017754Freshwater LakeMKTQFTPGPWRTTGLNVRAGDALICYATNHWADDETPENERQANANLIAAAPDLLSALERLVHPMADDDDLDYAREVIAKAKGQP
Ga0181349_130938823300017778Freshwater LakeMKSQFTPGPWRTTGLNVRAGDALICYATNHWADDETPESERQANADLIASAPDLLSALERLVHPRADDDGLYYAREIIKKAKIRRANI
Ga0181348_122682213300017784Freshwater LakeVSHTPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDDDLDFARAVIAKAKGQQP
Ga0181355_109006223300017785Freshwater LakeMKSQFTPGPWRTTGRNVRAGDALICYATNHWADDETPENERQANANLIASAPDLLSALERLVHPMADDDDLDYAREVIAKARGV
Ga0181355_122984533300017785Freshwater LakeMKTQFTPGPWRTTGLNVRAGDALICYATNHWADDETPESERQANADLIASAPDLLSALERLVHPMADDDDLDYAREIIKKAKGQL
Ga0181355_131208213300017785Freshwater LakeTTGLNVRAGDALICYAMNHHAHTETPEPEKMANARLISLAPQMLLALQRLAHPMADDDDLDFARAIIRKAKGQQP
Ga0181361_11209813300019783Freshwater LakeVSHTPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDDDLDYARAIIRKAKGQQP
Ga0211734_1022116113300020159FreshwaterVKPQHTPGPWRQTGPNVRAGDALICYAMNHHANAETPEPEKLANARLISLAPQMLLALERLAHPMADDDDLDYAREVIARAKGQQ
Ga0211729_1103730393300020172FreshwaterGPWRQTGPNVRAGDALICYAMNHHANAETPEPEKLANARLISLAPQMLLALERLAHPMADDDDLDYAREVIAKAKGLQ
Ga0208235_104238523300020530FreshwaterMKTHTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISLAPQMLLALERLTHPMADDDDLDYAREVIRKARGGQP
Ga0222714_10001553393300021961Estuarine WaterMKTTPFTPGPWRQTGPNVRAGDALICWATNHHANAETPEPEKLANARIIAAAPQMLLALERLTHPMADDEDLDYAREIIAKAKGN
Ga0222713_1025296233300021962Estuarine WaterMKTHTPGPWRTTGLNVRAGDALICYATNHWANYETPESERQANADLIASAPDLLSALERLVHPMADDDDLDFAREVIKKAKGLAVKSHE
Ga0222713_1054585123300021962Estuarine WaterMKTTPFTPGPWRQTGPNVRAGDALICYAMNHHANAETPEPEKLANARLISLAPQMLLALERLAHPMADDEDLDYAREIIAKAKAN
Ga0181337_102795223300022173Freshwater LakeVSHTPGPWRTTGLNVRAGDALICYAMNHHAHTETPEPEKMANARLISLAPQMLLALQRLAHPMADDDDLDYARAIIRKAKGQQP
Ga0181353_103301313300022179Freshwater LakeMKTHTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISIAPQMLLALERLAHPMADDDDLDYAREIIAKAKGQL
Ga0181353_109255823300022179Freshwater LakeMKTQFTPGPWRTTGLNVRAGDALICYATNHWADDETPESERQANADLIASAPDLLSALERLVHPMADDEDLDYAREIIAKAKGS
Ga0181354_124116813300022190Freshwater LakeNCSGHRKGDWRQTVSHTPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDDDLDYARAIIRKAKGQQP
Ga0181351_100821883300022407Freshwater LakeMRTEQFTPGPWRQTGINVRAGDALICYAMNHHANAETPEPEKLANARLIACAPQMLLALERLTHPMADDEDLDYAREVIAKAKGQQ
Ga0255098_102761233300027126FreshwaterHTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISLAPQMLLALERLAHPMADDEDLDYAREVIKKAKGQL
Ga0255071_100717243300027127FreshwaterMKTHTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISLAPQMLLALERLAHPMADDEDLDYAREVIKKAKGQL
Ga0255082_103961333300027139FreshwaterTHTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISLAPQMLLALERLAHPMADDEDLDYAREVIKKAKGQL
Ga0255078_101676673300027156FreshwaterLNVRAGDALICYAMNHHANAETSEPEKLANARLISLAPQMLLALERLAHPMADDEDLDYAREVIKKAKGQL
Ga0255096_101201673300027302FreshwaterFTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISLAPQMLLALERLAHPMADDEDLDYAREVIKKAKGQL
Ga0255086_1002541113300027486FreshwaterRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISLAPQMLLALERLAHPMADDEDLDYAREVIKKAKGQL
Ga0255072_101499053300027508FreshwaterMKTHTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISLAPQMLLALERLAHPMADDEDLD
Ga0255068_10392113300027579FreshwaterMKPQFTPGPWRTTGLNVRADDALVCYATNHWANYETPESERQANANLIASAPDLLAALERLTHPMADDEDLAYAR
Ga0209593_1012257123300027743Freshwater SedimentMKTHTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISLAPEMLLALERLVHPMADDDDLDYAREVIAKAKGLTVKSHE
Ga0209820_119506123300027956Freshwater SedimentMKTHTPGPWRTTGLNVRAGDALICYAMNHHANAETSEPEKLANARLISLAPEMLLALERLVHPMADDDDLDYAREVIRKAKGGGQP
Ga0315907_10006826213300031758FreshwaterMKTQFTPGPWRTTGLNVRAGDALICYAMNHHANAETPEHEKMANARLISLAPQMLLALQRLTHPMADDEDLDYAREVIAKAKGLQ
Ga0315907_1006313073300031758FreshwaterMRTEQFTPGPWRTTGVNVRAGDALICWATNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSFARDCIANARGK
Ga0315907_1006809473300031758FreshwaterMRTEQFTPGPWRTTGINVRAGDALICWATNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSFARDCIANARGK
Ga0315907_1027411453300031758FreshwaterMRTEQFTPGPWRTTGINVRAGDALICYATNHHANAETPEPEKLANARLIAAAPDLLLALQRLTHPMADDEDLSFARDTIANARGK
Ga0315907_1046881233300031758FreshwaterMKTHTPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLIACAPQMLLALERLTHPMADDEDLDYAREVIAKAKGNE
Ga0315907_1113698333300031758FreshwaterVKSEFTPGPWRTTATNVRAGDALICYATNHHANAETPEHEKLANARLIAAAPDLLLALERLVHPMADDEDLSFARDCIANARGK
Ga0315900_1012333573300031787FreshwaterMRTEQFTPGPWRTTGINVRAGDALICYAMNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSFARDCIANAR
Ga0315900_1016634563300031787FreshwaterMKTHTPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDEDLDYAREVIAKAKGGQQ
Ga0315900_1081556013300031787FreshwaterQTGPNVRAGDALICYAMNHHANAETPEPEKLANARLIASAPQMLLALQRLTHPMADDDDLDYARDVIAKAKGQQ
Ga0315909_10034272123300031857FreshwaterVKSEFTPGPWRTTATNVRAGDALICYATNHHANAETPEHEKLANARLIAAAPDLLLALERLVHPMADDEDLSFARDCI
Ga0315909_1009461613300031857FreshwaterVKSEFTPGPWRTTGINVRAGDALICYAMNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSFARDCIANARGK
Ga0315909_1010346643300031857FreshwaterMRTEQFTPGPWRTTGTNVRAGDALICYAMNHHANAETPEHEKLANARLIAAAPDLLLALERLVHPMADDEDLSYARDCIANARGK
Ga0315909_1015488313300031857FreshwaterPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDDDLDYAREIIKKAKGQP
Ga0315909_1075873633300031857FreshwaterMKTHTPGPWRTTGLNVRAGDALICYATNHWADDETPESERQANANLIASAPDLLSALERLAHPMADDDDLDYAREIIAKAKGQL
Ga0315904_1004190473300031951FreshwaterMRTEQFTPGPWRTTGINVRAGDALICYATNHHANAETPEPEKLANARLISCAPQMLLALQRLTHPMADDDDLDYAREVITKAKGGA
Ga0315904_1016045723300031951FreshwaterMKTHTPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDDDLDYAREIIKKAKGQP
Ga0315904_1027080633300031951FreshwaterMRTEQFTPGPWRTTGINVRAGDALICWATNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSFARDTIANARGK
Ga0315901_1030467913300031963FreshwaterGYLQSDWRCAVKSEFTPGPWRTTGINVRAGDALICYAMNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSFARDCIANARGK
Ga0315906_1012065613300032050FreshwaterVKSEFTPGPWRTTGINVRAGDALICYAMNHHANAETPEPEKLANARLIAAAPDLLLALERLVHPMADDEDLSFARDCIANARGK
Ga0315906_1030236263300032050FreshwaterTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISLAPQMLLALQRLAHPMADDDDLDYAREIIKKAKGQP
Ga0315906_1104111223300032050FreshwaterMRTEQFTPGPWRTTGINVRAGDALICYAMNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSF
Ga0315902_1042686323300032093FreshwaterMRTEQFTPGPWRQTGPNVRAGDALICYAMNHHANAETPEPEKLANARLIASAPQMLLALQRLTHPMADDDDLDYAREVIAKAKGQQ
Ga0315903_1012095813300032116FreshwaterMRTEQFTPGPWRTTGINVRAGDALICYAMNHHANAETPEPEKLANARLIAAAPDLLLALERLTHPMADDEDLSFARD
Ga0315903_1039205413300032116FreshwaterMRTEQFTPGPWRQTGPNVRAGDALICYAMNHHANAETPEPEKLATARLIASAPQMLLALQRLTHPMADDDDLDYARDVIAKAKGQQ
Ga0334980_0123529_182_4423300033816FreshwaterMKTHTPGPWRTTGLNVRAGDALICYAMNHHANAETPEPEKLANARLISLAPQMLLALERLAHPMADDDDLDYAREVIAKARGGCQL
Ga0334982_0219118_436_6903300033981FreshwaterMKAAQFTPGPWRQTGINVRAGDALICYAMNHHANAETPEPEKLANARLISCAPQMLLAIERLIHPMADDDDLDYARAIIAKAKG
Ga0334994_0143147_956_12103300033993FreshwaterMKTHTPGPWRTTGLNVRAGDALICYATNHWADDETPESERQANADLIASAPDLLSTLERLVHPMADDDDLDYAREVIRRAKGQL
Ga0334987_0033494_3498_37733300034061FreshwaterMKPQFTPGPWRTTGLNVRAGDALICFATDHWYAEDNGFYAFTDLAEKQANATLISCAPELLDALERLAHPMADDEDLDYAREIIAKAKGQL
Ga0334987_0090205_166_4173300034061FreshwaterMKTHTPGPWRQTGINVRAGDALICYAMNHHANAETPEPEKLANARLISLAPQMLLALERLAHPMADDEDLDYAREIIAKAKGQ
Ga0334987_0103137_460_7113300034061FreshwaterVNHTPGPWLTTGLNVRAGDALICYATNHWDDDLIPESERQANADLIASAPDLLSALERLVHPMADDDDLDYAREVIRKAKGSQ
Ga0335029_0092281_996_12593300034102FreshwaterMKPQFTPGPWRTTGLNVRAGDALICYATNHHANAETPEPEKLANARLISLAPQMLLTLERLAHPMADDDDLDYAREVIRKAKGGGQL
Ga0335029_0262099_403_6543300034102FreshwaterMKTHTPGPWRTTGLNVRAGDALICYATNHWADDETPESERQANADLIASAPDLLSALERLAHPMADDEDLDYAREVIAKAKGQ
Ga0335036_0026056_1165_14223300034106FreshwaterMKATHTPGPWRQTGINVRAGDALICYAMNHHANAETHEPEKLANARLISLAPQMLLALQRLTHPMADDEDLDYAREVIAKAKGQQ
Ga0335063_0072639_1117_13713300034111FreshwaterMKTHTPGPWRTTGLNVRAGDALICYATNHWADDETPESERQANADLIASAPDLLSALERLVHPMADDEDLDYAREIIAKAKGQL
Ga0334997_0917932_282_5183300034280FreshwaterMKSHTPGPWRTTGLNVRAGDALICYAMNHHAHAETPEPEKMANARLISIAPQMLLALERLAHPMADDEDLDYAREIIAK


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