Metagenome / Metatranscriptome Family F102515

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102515
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	60 residues
Representative Sequence	MARQLVVGNQGRTHQLGAHQGSFRGRERIAYQDLPSIHEIETTLEQLTASITLRTEDIPR
Number of Associated Samples	64
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	92.08 %
% of genes near scaffold ends (potentially truncated)	97.03 %
% of genes from short scaffolds (< 2000 bps)	99.01 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (63.366 % of family members)
Environment Ontology (ENVO)	Unclassified (77.228 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (56.436 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88. 1B570J13884_1070071 2B570J14230_101532391 3B570J29586_10098901 4B570J29600_1020601 5B570J29611_10084102 6B570J29032_1091251531 7Ga0068877_102693771 8Ga0068876_105403301 9Ga0068876_107102862 10Ga0114338_10686514 11Ga0114338_12248941 12Ga0114338_12418161 13Ga0114338_12448821 14Ga0114338_12495281 15Ga0114338_12852271 16Ga0114341_103421282 17Ga0114345_12042641 18Ga0114345_13133881 19Ga0114348_10355821 20Ga0114348_11082781 21Ga0114348_11111711 22Ga0114348_11284761 23Ga0114352_10384242 24Ga0114352_10866011 25Ga0114352_11416381 26Ga0114349_11231581 27Ga0114349_11840822 28Ga0114349_12151231 29Ga0114349_12507311 30Ga0114353_10992941 31Ga0136711_1019441 32Ga0136711_1022571 33Ga0157599_10631251 34Ga0157602_13002443 35Ga0164293_107930581 36Ga0164292_106005221 37Ga0164292_109174601 38Ga0180055_11029592 39Ga0180057_10912293 40Ga0208483_10137082 41Ga0208087_10267761 42Ga0208362_10505472 43Ga0208719_10746381 44Ga0209985_104434022 45Ga0334980_0413877_286_507 46Ga0334977_0321529_2_142 47Ga0334977_0339475_425_637 48Ga0334978_0603031_3_161 49Ga0334982_0558111_1_159 50Ga0334992_0269101_627_812 51Ga0334992_0311756_3_191 52Ga0334992_0331122_3_188 53Ga0334994_0397182_3_233 54Ga0334994_0537609_3_146 55Ga0334996_0454957_422_583 56Ga0335003_0419022_2_217 57Ga0334991_0306394_1_201 58Ga0334985_0378930_2_181 59Ga0334985_0564746_3_182 60Ga0334985_0699996_405_548 61Ga0334998_0758184_274_510 62Ga0335002_0652077_396_536 63Ga0335002_0705587_1_207 64Ga0335021_0381752_2_160 65Ga0335021_0510708_374_607 66Ga0335024_0628930_300_509 67Ga0334983_0331636_2_208 68Ga0334987_0774525_3_233 69Ga0335019_0817350_378_524 70Ga0335019_0877177_3_164 71Ga0335020_0063311_2_238 72Ga0335020_0303363_3_218 73Ga0335020_0396146_2_106 74Ga0335012_0593539_3_131 75Ga0335022_0615186_3_233 76Ga0335027_0727137_404_583 77Ga0335030_0644473_425_643 78Ga0335030_0892962_2_247 79Ga0335051_0228487_2_121 80Ga0335066_0529506_399_620 81Ga0335033_0345567_584_748 82Ga0335033_0457672_2_142 83Ga0335054_0503711_529_675 84Ga0335056_0581356_3_143 85Ga0335058_0494294_426_692 86Ga0335060_0433915_1_204 87Ga0335060_0561593_1_144 88Ga0335065_0760382_1_249 89Ga0335065_0761343_3_134 90Ga0335049_0453472_1_228 91Ga0335052_0382655_624_752 92Ga0334997_0358985_746_931 93Ga0334997_0784404_440_574 94Ga0334997_0846132_374_547 95Ga0335013_0425631_3_128 96Ga0335013_0702692_3_194 97Ga0335013_0761191_384_545 98Ga0335039_0434971_2_115 99Ga0335048_0382629_3_116 100Ga0335048_0475088_2_244 101Ga0335064_0682276_2_238
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88. 1B570J13884_1070071 2B570J14230_101532391 3B570J29611_10084102 4Ga0068877_102693771 5Ga0068876_107102862 6Ga0114345_12042641 7Ga0114349_11231581 8Ga0136711_1022571 9Ga0334996_0454957_422_583 10Ga0335058_0494294_426_692
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88. 1B570J13884_1070071 2B570J14230_101532391 3B570J29611_10084102 4Ga0068877_102693771 5Ga0068876_107102862 6Ga0114345_12042641 7Ga0114349_11231581 8Ga0136711_1022571 9Ga0334996_0454957_422_583 10Ga0335058_0494294_426_692
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 16.67% Coil/Unstructured: 58.33%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001266\|B570J13884_107007	Not Available	695	Open in IMG/M
3300001282\|B570J14230_10153239	Not Available	657	Open in IMG/M
3300002276\|B570J29586_1009890	Not Available	890	Open in IMG/M
3300002364\|B570J29600_102060	Not Available	1301	Open in IMG/M
3300002401\|B570J29611_1008410	Not Available	889	Open in IMG/M
3300002408\|B570J29032_109125153	Not Available	603	Open in IMG/M
3300005525\|Ga0068877_10269377	Not Available	994	Open in IMG/M
3300005527\|Ga0068876_10540330	Not Available	636	Open in IMG/M
3300005527\|Ga0068876_10710286	Not Available	537	Open in IMG/M
3300008105\|Ga0114338_1068651	Not Available	2074	Open in IMG/M

Showing 1 to 10 of 101 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	84.16%
Lentic	Environmental → Aquatic → Freshwater → Lentic	13.86%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.98%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	7.92%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	84.16%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	5.94%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	63.37%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	7.92%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.98%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	3.96%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	20.79%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001266	Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002276	Freshwater microbial communities from Lake Mendota, WI - 09JUN2009 deep hole epilimnion ns	Environmental	Open in IMG/M
3300002364	Freshwater microbial communities from Lake Mendota, WI - 09AUG2011 deep hole epilimnion	Environmental	Open in IMG/M
3300002401	Freshwater microbial communities from Lake Mendota, WI - 26JUN2009 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300008105	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, sample E2014-0046-100-LTR	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M

Showing 1 to 10 of 64 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J13884_1070071	3300001266	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPSIHEIEQ
B570J14230_101532391	3300001282	Freshwater	MARQLIVGNQGRNHQVAAYQGSFRGRERIAYQDLPSIHELEQVLEQLTATITLRTEDIPRRPITLPPLT
B570J29586_10098901	3300002276	Freshwater	MARQIIVGNQGRNHQVAAYQGSFRGRERIAYQDLPSIHELEQVLEQLTTTITLRAEDIPQRLITLPPLTTDLSEIDVY
B570J29600_1020601	3300002364	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPSIHEIEQILEQLTANI
B570J29611_10084102	3300002401	Freshwater	MARQLVLGNQGRNHQLGAHQGNSRGRERIAYQDLPSIHEIEHTXEQLTASI
B570J29032_1091251531	3300002408	Freshwater	MARQLVVGNQGRTHQLGAHQGSFRGRERIAYQDLPSIHEIETTLEQLTASITLKTEDIPRRPLILPP
Ga0068877_102693771	3300005525	Freshwater Lake	MSRQIIVGNQGRAHQVGTYQGSFRGRERIAYHDLPTPHEIEQVLEQLTANITLKTEDIPRRPITLPPVITELSEIDT*
Ga0068876_105403301	3300005527	Freshwater Lake	MARQLIVGNQGRNHQVGAYQGSFRGRERIAYQDLPSPYELEQILEQLTANITLRTEDIPRRPMTLPPIINELSEIDVY
Ga0068876_107102862	3300005527	Freshwater Lake	MARQLVLGNQGRTHQLGAYQGNSRGRERIAYQDLPSIHEIENTLEQLTASITLKTEDIPRRPLILPPTVYDLSEI
Ga0114338_10686514	3300008105	Freshwater, Plankton	MARQIIVGNQGRNHQVAAYQGSFRGRERIAYQDLPSIHELEQVLEQLTTTITLRAEDIPQRLITLPPLTTDLS
Ga0114338_12248941	3300008105	Freshwater, Plankton	MARQLVVGNHGRNHQLGAHQGNSRGRERIPYQDLPSIFEIEQTLEQLTASITLK
Ga0114338_12418161	3300008105	Freshwater, Plankton	MARQLVIGNQGRTHQLGANQGNFRGRERIAYQDLPSIHEIEQTLEQLTASITLRTE
Ga0114338_12448821	3300008105	Freshwater, Plankton	MARQLVLGNQGRTHQLGAHQGNSRGRERIAYQDLPSLHEIESTLEQLTASITLRTEDIPRRPLTL
Ga0114338_12495281	3300008105	Freshwater, Plankton	MARQLVVEQGRTHQLGAHQGSFRGRERIAYQDLPSIHEIETTLEQL
Ga0114338_12852271	3300008105	Freshwater, Plankton	MARQLVLGNQGRTHQLGAHQGNSRGRERIAYQDLPSIHEIENTLEQLTASITLKTEDIPRRPLTMPPVVYDLSEIDIY
Ga0114341_103421282	3300008108	Freshwater, Plankton	MSRQIIVGNQGRAHQVGAYKGSFRGRERIAYQDLPTLHEIEQVLEQLTANITLKTEDIPRRPITLPPAFTELSE
Ga0114345_12042641	3300008112	Freshwater, Plankton	MSRQITIGNQGRAHQAGTYQGNFRGRERIAYQDLPSPYEIEQILEQLTANITLKTEDI
Ga0114345_13133881	3300008112	Freshwater, Plankton	MARQLVLGNQGRTHQLGAHQGNSRGRERIAYQDLPSIHEIENTLEQLTASITLKTEDIPRRPLTMPPVVYDL
Ga0114348_10355821	3300008115	Freshwater, Plankton	MARQLVVGNQGRTHQLGAHQGSFRGRERIAYQDLPSIHEIESTLEQLTASITLRTEDIPRRPITLPPIVTD
Ga0114348_11082781	3300008115	Freshwater, Plankton	MARQLVVGNQGRTHQLGAHQGSFRGRERIAYQDLPSIHEIESTLEQLTTSITL
Ga0114348_11111711	3300008115	Freshwater, Plankton	MARQLVIGNQGRTHQLGAHQGSFRGRERIAYQDLPSIHEIESTLEQLTASITLRTEDIPRRPITL
Ga0114348_11284761	3300008115	Freshwater, Plankton	MSRQITIGNQGRAHQAGTYQGNFRGRERIAYQDLPSPYEIEQILEQLTANITL
Ga0114352_10384242	3300008118	Freshwater, Plankton	MARQLVIGNQGRTHQLGAHQGNYRGRERIAYQDLPSIHEIE
Ga0114352_10866011	3300008118	Freshwater, Plankton	MARQLVIGNQGRTHQLGAHQGSFRGRERIAYQDLPSIHEIESTLEQLTASITLRTEDIPRRPMTLPPVANDLSEIDIYTEMAR
Ga0114352_11416381	3300008118	Freshwater, Plankton	MARQLVVGNQGRTHQLGAHQGSFRGRERIAYQDLPS
Ga0114349_11231581	3300008263	Freshwater, Plankton	MARQPVIGNQSRTHQLGAHQGSFRGRERIAYQDLPSIHEIESTLEQLTASITLRTEDIPRSPM
Ga0114349_11840822	3300008263	Freshwater, Plankton	MARQLVVGNHGRNHQLGAHHGNSRGRERIMYQDLPSISEIEQTLEQLTASITLKTEDIPR
Ga0114349_12151231	3300008263	Freshwater, Plankton	MARQLVLGNQGRNHQLGAHQGNFRGRERIAYQDLPSIHEIENTLEQLTASITLKTEDI
Ga0114349_12507311	3300008263	Freshwater, Plankton	MARQLVVGNQGRTHQLGAYQGNFRGRERIAYQDLPSIHEIEQTLEQLTASITLRTEDIPRRPMTLPPVVNDLSEIDIYTE
Ga0114353_10992941	3300008264	Freshwater, Plankton	MARQIIVGNQGRTHQLGAYQGNFRGRERIAYQDLPSIHEIESILEQLTASITLRTEDIPRRPITLPPVVADLSEIDIYTEMAR
Ga0136711_1019441	3300011178	Freshwater	MSRQLIVGNQGRTHQAGAYQGSFKGRERIAYQDLPSIH
Ga0136711_1022571	3300011178	Freshwater	MSRQITIGNQGRAHQAGTYQGNFRGRERIAYQDLPS
Ga0157599_10631251	3300012715	Freshwater	MARQLVLGNQGRNHQLGAHQGNSRGRERIAYQDLPSIHEIE
Ga0157602_13002443	3300012730	Freshwater	MARQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPSVHEIEQTLEQLTANITLRTEDIPRRPITLPPIV
Ga0164293_107930581	3300013004	Freshwater	MARQLVLGNQGRTHQLGAHQGNSRGRERIAYQDLPSIHEIENTLEQLTASI
Ga0164292_106005221	3300013005	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPSIHEIEQILE
Ga0164292_109174601	3300013005	Freshwater	MARQLVIGNQGRNHQLGAHQGNSRGRERIAYQDLPSIHEI
Ga0180055_11029592	3300016691	Freshwater	MARQLVVGNQGRTHQLGAYQGNFRGRERIAYQDLPSIHDIEQTLEQLTASITLRTEDIPRRPM
Ga0180057_10912293	3300016697	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFKGRERIAYQDLPSIHEIEQILEQLTANITLRTE
Ga0208483_10137082	3300020492	Freshwater	MARQLVVGNHGRNHQLGAHHGNSRGRERITYQDLPSIFEIEQTLEQLTASITLKTEDIPRRPLTLPPVVTDL
Ga0208087_10267761	3300020502	Freshwater	MARQLVVGNQGRTHQLGAYQGSFRGRERIAYQDLPSIHEIEQILEQLTASITLRTEDIPRRPMTLPPIVNELSEIDVYTEM
Ga0208362_10505472	3300020558	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPS
Ga0208719_10746381	3300020564	Freshwater	MARQLVIGNQGRNHQLGAHQGNSRGRERIAYQDLPSIHEIEHTLE
Ga0209985_104434022	3300027806	Freshwater Lake	MARQIIVGNQGRNHQVAAYQGSFRGRERIAYQDLPSIH
Ga0334980_0413877_286_507	3300033816	Freshwater	MARQLVLGNQGRTHQLGAHQGNSRGRERIAYQDLPSIHEIENTLEQLTASITLKTEDIPRRPLTLPPVVYDLSE
Ga0334977_0321529_2_142	3300033978	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPSIHEIEQILEQL
Ga0334977_0339475_425_637	3300033978	Freshwater	MSRQITIGNQGRAHQAGTYQGNFRGRERIAYQDLPSPYEIEQILEQLTANITLKTEDIPRRPITMPPVFA
Ga0334978_0603031_3_161	3300033979	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPSIHEIEQILEQLTANITL
Ga0334982_0558111_1_159	3300033981	Freshwater	MARQLIVGNQGRNHQVGAYQGSFRGRERIAYQDLPSIHELEQILEQLTANITL
Ga0334992_0269101_627_812	3300033992	Freshwater	MARQLVLGNQGRNHQLGAHQGNFRGRERIAYHDLPSIHEIENTLEQLTASITLKTEDIPRRP
Ga0334992_0311756_3_191	3300033992	Freshwater	MARQIIVGNQGRNHQVAAYQGSFRGRERIAYQDLPSIHELEQVLEQLTTTITLRAEDIPQRLI
Ga0334992_0331122_3_188	3300033992	Freshwater	MSRQITIGNQGRAHQAGTYQGNFRGRERIAYQDLPSPYEIEQILEQLTANITLKTEDIPRRP
Ga0334994_0397182_3_233	3300033993	Freshwater	MARQLVLGNQGRTHQLGAHQGNSRGRERIAYQDLPSIHEIENTLEQLTASITLKTEDIPRRPLTMPPVVYDLSEIDI
Ga0334994_0537609_3_146	3300033993	Freshwater	MARQLVVGNQGRTHQLGAHQGSFRGRERIAYQDLPSIHEIETTLEQLT
Ga0334996_0454957_422_583	3300033994	Freshwater	MARQLIVGNQGRNHQVGAYQGSFRGRERIAYQDLPSIHELEQILEQLTANITLR
Ga0335003_0419022_2_217	3300033995	Freshwater	MARQLVIGNQGRNHQLGAHQGNSRGRERIAYQDLPSIHEIEHTLEQLTATITLKTEDIPRRPLTLPPVVNDL
Ga0334991_0306394_1_201	3300034013	Freshwater	MARQLVVGNQGRTHQLGAYQGSFRGRERIAYQDLPSAHEIEQILEQLTANITLRTEDIPRRPITLPP
Ga0334985_0378930_2_181	3300034018	Freshwater	MARQLVLGNQGRTHQLGAHQGNSRGRERIAYQDLPSIHEIENTLEQLTASITLKTEDIPR
Ga0334985_0564746_3_182	3300034018	Freshwater	MARQLIVGNQGRTHQAGAYQGSFRGRERIAYQDLPSIYEIEQTLEQLTASITLRTEDIPR
Ga0334985_0699996_405_548	3300034018	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPSIHEIEQILEQLT
Ga0334998_0758184_274_510	3300034019	Freshwater	MARQLVIGNQGRTHQLGAHQGSFRGRERIAYQDLPSIHEIESTLEQLTASITLRTEDIPRRPITLPPIVTDLSEIDIYT
Ga0335002_0652077_396_536	3300034020	Freshwater	MSRQITIGNQGRAHQAGTYQGNFRGRERIAYQDLPSPYEIEQILEQL
Ga0335002_0705587_1_207	3300034020	Freshwater	MARQLVLGNQGRNHQLGAHQGNSRGRERIAYQDLPSIHEIENTLEQLTASITLKTEDIPRRPLTLPPVV
Ga0335021_0381752_2_160	3300034023	Freshwater	MARQLVLGNQGRNHQLGAHQGNFRGRERIAYHDLPSIHEIENTLEQLTASITL
Ga0335021_0510708_374_607	3300034023	Freshwater	MARQLVVGNQGRTHQLGAYQGSFRGRERIAYQDLPSIHEIEQILEQLTASITLRTEDIPRRPITLPPIVNELSEIDVY
Ga0335024_0628930_300_509	3300034051	Freshwater	MSRQLIGGNQGRTHQVGAYQGSFRGRERIAYQDLPSFYEIEQVLEQLTANITLKTEDIPRRPITLPPVAN
Ga0334983_0331636_2_208	3300034060	Freshwater	MARQIIVGNQGRNHQVAAYQGSFRGRERIAYQDLPSIHELEQVLEQLTTTITLRAEDIPQRLITLPPLT
Ga0334987_0774525_3_233	3300034061	Freshwater	MARQLIVGNQGRNHQVGAYQSSFRGRERIAYQDLPSPYELEQILEQLTANITLRTEDIPRRPMTLPPIINELSEIDV
Ga0335019_0817350_378_524	3300034066	Freshwater	MARQLVLGNQGRTHQLGAHQGNSRGRERIAYQDLPSIHEIENTLEQLTA
Ga0335019_0877177_3_164	3300034066	Freshwater	MSRQLIVGNQGRTHQAGAYQGSFRGRERIAYQDLPSIHEIEQILEQLTANITLR
Ga0335020_0063311_2_238	3300034082	Freshwater	MARQLVVGNQGRTHQLGAHQGSFRGRERIAYQDLPSIHEIETTLEQLTASITLKTEDIPRRPLILPPAVNDLPEIEVYT
Ga0335020_0303363_3_218	3300034082	Freshwater	MARQLIVGNQGRNHQVGAYQGSFRGRERIAYQDLPSIHEIEQTLEQLTASITLRTEDIPRRPMTLPPIVNEL
Ga0335020_0396146_2_106	3300034082	Freshwater	MARQLVIGNQGRTHQLGAHQGNFRGRERIAYQDLP
Ga0335012_0593539_3_131	3300034093	Freshwater	MARQLVVGNQGRNHQLGAHQGNSRGRERIAYQDLPSIHEIEHT
Ga0335022_0615186_3_233	3300034095	Freshwater	MARQLVVGNHGRNHQLGAHHGNSRGRERITYQDLPSIFEIEQTLEQLTASITLKTEDIPRRPLTLPPVVTDLSEIDI
Ga0335027_0727137_404_583	3300034101	Freshwater	MARQLVVGNQGRTHQLGAHQGSFRGRERIAYQDLPSIHEIETTLEQLTASITLRTEDIPR
Ga0335030_0644473_425_643	3300034103	Freshwater	MARQLVIGNQGRTHQLGAHQGSFRGRERIAYQDLPSIHEIETTLEQLTASITLRTEDIPRRPMTLPPVVNDLS
Ga0335030_0892962_2_247	3300034103	Freshwater	MARQLVLGNQGRTHQLGAHQGNSRGRERIAYQDLPSIHEIENTLEQLTASITLKTEDIPRRPLTLPPVVYDLSEIDIYTEMA
Ga0335051_0228487_2_121	3300034109	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPSIHEI
Ga0335066_0529506_399_620	3300034112	Freshwater	MARQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPSIHELEQILEQLTANITLRTEDIPRRPITLPPLTTDLSE
Ga0335033_0345567_584_748	3300034117	Freshwater	MARQLIVGNHGRNHQLGAHQGNSRGRERIPYQDLPSIFEIEQTLEQLTASITLKT
Ga0335033_0457672_2_142	3300034117	Freshwater	MSKQLIVGNQGRTHQMGAYQGSFRGRERIAYQDLPSAHEIEQILEQL
Ga0335054_0503711_529_675	3300034119	Freshwater	MARQLVLGNQGRNHQLGAHQGNSRGRERIAYQDLPSIHEIEHTLEQLTA
Ga0335056_0581356_3_143	3300034120	Freshwater	MARQLIVGNQGRNHQVGAYQGSFRGRERIAYQDLPSPYELEQILEQL
Ga0335058_0494294_426_692	3300034121	Freshwater	MARQLVVGNHGRNHQLGAQHGNSRGRERITYQDLPSIFEIEQTLEQLTASITLKTEDIPRRPLTLPPVVTDLSEIDIYTVRSTRTRSSV
Ga0335060_0433915_1_204	3300034122	Freshwater	MARQLVVGNHGRNHQLGAHHGNSRGRERIAYQDLPSIHEIEHTLEQLTASITLKTEDIPRRPLTLPPV
Ga0335060_0561593_1_144	3300034122	Freshwater	MARQLVLGNQGRTHQLGAHQGNSRGRERIAYQDLPSIHEIENTLEQLT
Ga0335065_0760382_1_249	3300034200	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPSIHEIEQILEQLTANITLRTEDIPRRSITLPPIITELSEIDVYTEMAR
Ga0335065_0761343_3_134	3300034200	Freshwater	MARQLVLGNQGRTHQLGAHQGNFRGRERIAYHDLPSIHEIENTL
Ga0335049_0453472_1_228	3300034272	Freshwater	MARQLVIGNQGRTHQLGAHQGSFRGRERIAYQDLPSIHEIESTLEQLTASITLRTEDIPRRPITLPPIVTDLSEID
Ga0335052_0382655_624_752	3300034279	Freshwater	MSRQLIGGNQGRTHQVGTYQGSFRGRERIAYQDLPSFYEIEQV
Ga0334997_0358985_746_931	3300034280	Freshwater	MSRQITIGNQGRAHQVGAYQGNFRGRERIAYQDLPSPYEIEQILEQLTANITLKTEDIPRRP
Ga0334997_0784404_440_574	3300034280	Freshwater	MARQLVIGNQGRTHQLGAHQGNFKGRERIAYQDLPSIHEIETTLE
Ga0334997_0846132_374_547	3300034280	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFKGRERIAYQDLPSIHEIEQILEQLTANITLRTEDI
Ga0335013_0425631_3_128	3300034284	Freshwater	MARQLIVGNQGRNHQVGAYQGSFRGRERIAYQDLPSIHELEQ
Ga0335013_0702692_3_194	3300034284	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPSAHEIEQILEQLTANITLKTEDIPRRPIT
Ga0335013_0761191_384_545	3300034284	Freshwater	MSRQIIVGNQGRAHQVGAYQGSFRGRERIAYQDLPSVHEIEQILEQLTAHITLR
Ga0335039_0434971_2_115	3300034355	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPSIH
Ga0335048_0382629_3_116	3300034356	Freshwater	MSRQLIVGNQGRTHQVGAYQGSFRGRERIAYQDLPSVH
Ga0335048_0475088_2_244	3300034356	Freshwater	MSRQIIVGNQGRAHQVGAHQGSFRGRERIAYHDLPTPHEIEQVLEQLTANITLKTEDIPRRPITLPPAVTELSEIDTYTEM
Ga0335064_0682276_2_238	3300034357	Freshwater	MARQLVVGNHGRNHQLGAHHGNSRGRERIAYQDLPSILEIEQTLEQLTASITLKTEDIPRRPLTLPPVVTDLSEIDIYT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102515

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences