Metagenome / Metatranscriptome Family F102385

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F102385
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	53 residues
Representative Sequence	PQMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGFCN
Number of Associated Samples	78
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.97 %
% of genes near scaffold ends (potentially truncated)	97.03 %
% of genes from short scaffolds (< 2000 bps)	81.19 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.040 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (38.614 % of family members)
Environment Ontology (ENVO)	Unclassified (45.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.00% β-sheet: 0.00% Coil/Unstructured: 85.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF02586	SRAP	4.95
PF01809	YidD	3.96
PF02899	Phage_int_SAM_1	2.97
PF06114	Peptidase_M78	2.97
PF12850	Metallophos_2	1.98
PF00149	Metallophos	1.98
PF02384	N6_Mtase	1.98
PF00350	Dynamin_N	1.98
PF00899	ThiF	0.99
PF00005	ABC_tran	0.99
PF00082	Peptidase_S8	0.99
PF13166	AAA_13	0.99
PF13604	AAA_30	0.99
PF02641	DUF190	0.99
PF13175	AAA_15	0.99
PF13087	AAA_12	0.99
PF13657	Couple_hipA	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	4.95
COG0759	Membrane-anchored protein YidD, putatitve component of membrane protein insertase Oxa1/YidC/SpoIIIJ	Cell wall/membrane/envelope biogenesis [M]	3.96
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	2.97
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	2.97
COG1993	PII-like signaling protein	Signal transduction mechanisms [T]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.04 %
Unclassified	root	N/A	3.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.04 %
Unclassified	root	N/A	3.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.04 %
Unclassified	root	N/A	3.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	81.19 %
Unclassified	root	N/A	3.96 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	79.21 %
Unclassified	root	N/A	3.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.98 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	79.21 %
Unclassified	root	N/A	3.96 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	1.98 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	79.21 %
Unclassified	root	N/A	3.96 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	1.98 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.96 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	1.98 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.99 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.96 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	1.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	1.98 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.99 %
Stieleria	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Stieleria	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.96 %
Granulicella sp. L60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L60	1.98 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	1.98 %
Stieleria sedimenti	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Stieleria → Stieleria sedimenti	0.99 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100290881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1301	Open in IMG/M
3300009175\|Ga0073936_10152053	Not Available	1739	Open in IMG/M
3300009547\|Ga0116136_1028270	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L60	1739	Open in IMG/M
3300009548\|Ga0116107_1009969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L60	4084	Open in IMG/M
3300009641\|Ga0116120_1229577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	584	Open in IMG/M
3300009645\|Ga0116106_1223035	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	600	Open in IMG/M
3300009672\|Ga0116215_1297385	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	702	Open in IMG/M
3300009764\|Ga0116134_1094118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1090	Open in IMG/M
3300014151\|Ga0181539_1248859	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	665	Open in IMG/M
3300014158\|Ga0181521_10298654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	827	Open in IMG/M
3300014160\|Ga0181517_10104800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1640	Open in IMG/M
3300014160\|Ga0181517_10125489	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1466	Open in IMG/M
3300014161\|Ga0181529_10601395	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300014165\|Ga0181523_10245930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1023	Open in IMG/M
3300014168\|Ga0181534_10542549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	663	Open in IMG/M
3300014199\|Ga0181535_10380126	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Stieleria → Stieleria sedimenti	830	Open in IMG/M
3300014493\|Ga0182016_10022889	All Organisms → cellular organisms → Bacteria → Proteobacteria	5491	Open in IMG/M
3300014493\|Ga0182016_10281550	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1026	Open in IMG/M
3300014493\|Ga0182016_10540019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	669	Open in IMG/M
3300014494\|Ga0182017_10179001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1362	Open in IMG/M
3300014501\|Ga0182024_11935371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	654	Open in IMG/M
3300014502\|Ga0182021_12507021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	620	Open in IMG/M
3300014502\|Ga0182021_12594371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	609	Open in IMG/M
3300014658\|Ga0181519_10098804	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1889	Open in IMG/M
3300014838\|Ga0182030_10767086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	889	Open in IMG/M
3300014838\|Ga0182030_11039178	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	717	Open in IMG/M
3300014839\|Ga0182027_10042343	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5787	Open in IMG/M
3300014839\|Ga0182027_10570573	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300014839\|Ga0182027_11917111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	570	Open in IMG/M
3300017941\|Ga0187850_10239348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	819	Open in IMG/M
3300017941\|Ga0187850_10535129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	505	Open in IMG/M
3300017948\|Ga0187847_10057319	All Organisms → cellular organisms → Bacteria	2204	Open in IMG/M
3300017948\|Ga0187847_10247638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	971	Open in IMG/M
3300018017\|Ga0187872_10111195	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300018023\|Ga0187889_10402104	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	592	Open in IMG/M
3300018030\|Ga0187869_10573362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	535	Open in IMG/M
3300018035\|Ga0187875_10150416	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300018035\|Ga0187875_10305581	Not Available	860	Open in IMG/M
3300018047\|Ga0187859_10774505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	549	Open in IMG/M
3300019082\|Ga0187852_1003455	All Organisms → cellular organisms → Bacteria	11533	Open in IMG/M
3300019256\|Ga0181508_1193287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	711	Open in IMG/M
3300019786\|Ga0182025_1045578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	549	Open in IMG/M
3300022861\|Ga0224528_1001030	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	19730	Open in IMG/M
3300022872\|Ga0224526_1059651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	731	Open in IMG/M
3300023068\|Ga0224554_1081022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	777	Open in IMG/M
3300023088\|Ga0224555_1004841	All Organisms → cellular organisms → Bacteria	11938	Open in IMG/M
3300023088\|Ga0224555_1008994	All Organisms → cellular organisms → Bacteria	6706	Open in IMG/M
3300023091\|Ga0224559_1192166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	708	Open in IMG/M
3300023101\|Ga0224557_1131797	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	952	Open in IMG/M
3300023101\|Ga0224557_1187920	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	728	Open in IMG/M
3300025454\|Ga0208039_1033997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	990	Open in IMG/M
3300025472\|Ga0208692_1113277	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	519	Open in IMG/M
3300026502\|Ga0255350_1132810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	521	Open in IMG/M
3300028552\|Ga0302149_1031024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1396	Open in IMG/M
3300028552\|Ga0302149_1116756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	690	Open in IMG/M
3300028560\|Ga0302144_10082877	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300028560\|Ga0302144_10264346	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	557	Open in IMG/M
3300028562\|Ga0302151_10239413	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	609	Open in IMG/M
3300028745\|Ga0302267_10018254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5332	Open in IMG/M
3300028745\|Ga0302267_10416344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	552	Open in IMG/M
3300028762\|Ga0302202_10022236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4834	Open in IMG/M
3300028762\|Ga0302202_10062939	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2307	Open in IMG/M
3300028762\|Ga0302202_10214016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	977	Open in IMG/M
3300028785\|Ga0302201_10191776	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	854	Open in IMG/M
3300028788\|Ga0302189_10039864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2433	Open in IMG/M
3300028800\|Ga0265338_10206075	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300028860\|Ga0302199_1193472	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	622	Open in IMG/M
3300028866\|Ga0302278_10301285	Not Available	744	Open in IMG/M
3300029883\|Ga0311327_10081092	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2448	Open in IMG/M
3300029883\|Ga0311327_10894651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	512	Open in IMG/M
3300029907\|Ga0311329_10488381	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	839	Open in IMG/M
3300029910\|Ga0311369_10619706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	900	Open in IMG/M
3300029913\|Ga0311362_10096483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3955	Open in IMG/M
3300029913\|Ga0311362_10141983	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2963	Open in IMG/M
3300029914\|Ga0311359_10203904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1735	Open in IMG/M
3300029917\|Ga0311326_10567295	Not Available	549	Open in IMG/M
3300029918\|Ga0302143_1015125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1731	Open in IMG/M
3300029919\|Ga0302141_1046660	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1177	Open in IMG/M
3300029920\|Ga0302142_1249436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	536	Open in IMG/M
3300029922\|Ga0311363_10915610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	784	Open in IMG/M
3300029945\|Ga0311330_10150077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2216	Open in IMG/M
3300029988\|Ga0302190_10168428	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300030004\|Ga0302186_10028628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2554	Open in IMG/M
3300030004\|Ga0302186_10164515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	779	Open in IMG/M
3300030020\|Ga0311344_11357521	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	524	Open in IMG/M
3300030044\|Ga0302281_10023228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	3522	Open in IMG/M
3300030044\|Ga0302281_10431890	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	503	Open in IMG/M
3300030045\|Ga0302282_1351505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	525	Open in IMG/M
3300030049\|Ga0302191_10394902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	503	Open in IMG/M
3300030051\|Ga0302195_10151184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1107	Open in IMG/M
3300030507\|Ga0302192_10390405	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	570	Open in IMG/M
3300030519\|Ga0302193_10086507	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300031258\|Ga0302318_10044885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	1751	Open in IMG/M
3300031258\|Ga0302318_10616060	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	548	Open in IMG/M
3300031261\|Ga0302140_10099338	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2925	Open in IMG/M
3300031261\|Ga0302140_10928043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	606	Open in IMG/M
3300031524\|Ga0302320_10741220	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1103	Open in IMG/M
3300031670\|Ga0307374_10304735	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1004	Open in IMG/M
3300031788\|Ga0302319_10572781	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300033822\|Ga0334828_162292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	510	Open in IMG/M
3300034091\|Ga0326724_0605463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	544	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.01%
Host-Associated	Host-Associated	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.31%
Aquatic	Environmental → Aquatic	29.70%
Plants	Host-Associated → Plants	0.99%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	54.46%
Freshwater	Environmental → Aquatic → Freshwater	29.70%
Soil	Environmental → Terrestrial → Soil	14.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	54.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.87%
Lake	Environmental → Aquatic → Freshwater → Lake	0.99%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.99%
Clay	Environmental → Terrestrial → Soil → Clay	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	54.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	21.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	12.87%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.93%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	38.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	11.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	9.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.94%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.95%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.98%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.99%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.99%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.99%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.99%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.99%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022861	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T25	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025472	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300029920	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300030004	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_1	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1002908813	3300004152	Bog Forest Soil	LHDPQELSEPNSCDHFCDEEDSPLSPAEIDDLCERLNMGFCN*
Ga0073936_101520531	3300009175	Freshwater Lake Hypolimnion	SEPNSCDHFCDEEDSPLSPAEIDDLCERLNMGLCN*
Ga0116136_10282701	3300009547	Peatland	PKMHGCTSIGLHDPQELSEPNSCDHFCDGEDSPLSTTEIDDLCERLNTGICN*
Ga0116107_10099691	3300009548	Peatland	EPNSCDHFCDGEDSPLSTTEIDDLCERLNTGICN*
Ga0116120_12295771	3300009641	Peatland	IHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPDEIDELCEKLNTESCN*
Ga0116106_12230351	3300009645	Peatland	RELASVLHGLRLMQEQWEPQMHGCTSIGLHDPLELSEPNSCDHFCDGEDSPLSTTEIDDLCERLNTGICN*
Ga0116215_12973852	3300009672	Peatlands Soil	EPKMHGCTSIGLHDRLELSEPNSCDHFCNEEDSPLNPAEIDELCERLNMGFCN*
Ga0116134_10941183	3300009764	Peatland	GLRLMQEQWELKIHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPDEIDQLCERLNTEICN*
Ga0181539_12488592	3300014151	Bog	LMQEQWEPQMHGCASIGLHDPLELSEPNSCDHFCDEEDSPLGPGEIDDLCERLNMEFCN*
Ga0181521_102986541	3300014158	Bog	SEPNSCDHFCDEGDSPLGPSEIDELCERLNIGFCN*
Ga0181517_101048004	3300014160	Bog	RELASVLHGLRLMQEQWEPKMHGCSSIGLHEPLELSEPNSCDHFCDDEDSPLSPDEIDELCERLNMEFCN*
Ga0181517_101254894	3300014160	Bog	CTSIGLHDPLELSEPNSCDHFCDEEDPPLSPTEIDDLCERLNMGLCN*
Ga0181529_106013951	3300014161	Bog	ELASVLHGLRLMQEQWEPKMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPGEIDELCERLNAGFCN*
Ga0181523_102459303	3300014165	Bog	EQWEPKMHGCTSIGFHDPLELSEPNSCDHFCDEEDSPLGPGEIDELCERLNMGFCN*
Ga0181534_105425491	3300014168	Bog	TSISLHDPLELSEPSSCDHFCDGEDSALSPAEIDDLCVRLNMGFCN*
Ga0181535_103801261	3300014199	Bog	MHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPAEIDDLCERLNMGLCN*
Ga0182016_100228895	3300014493	Bog	DPLELSEPNSCDHFCDEEDSPLSPAEIDDLCERLNMGLCN*
Ga0182016_102815501	3300014493	Bog	HGLRLMQEQWEPKMHGCTSIGLHEPLELSEPNSCDHFCDEEDSPLSIDEIDQLCERLNTEICN*
Ga0182016_105400191	3300014493	Bog	PKMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLGPGEIDDLCERLNMGFCN*
Ga0182017_101790013	3300014494	Fen	SEPNSCDHFCDEKDSPLSPGEIDELCEKLNAGFSN*
Ga0182024_119353712	3300014501	Permafrost	GLHEPLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLCN*
Ga0182021_125070211	3300014502	Fen	PQMHGCTSIGLHDPLELSEPNSCDHFCDEGDSPLGPSEIDELCERLNIGFCN*
Ga0182021_125943712	3300014502	Fen	ASVLHGLRLMQEQWEPKMHGCTSIGLHNPLDLSEPNACDHFCDDEDSPLSPDEIDELCERLNTEICN*
Ga0181519_100988041	3300014658	Bog	ITRRELASVLHGLRLMQEQWEPQMRGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSATEIDDLCERLNMGLCN*
Ga0182030_107670862	3300014838	Bog	LHGLRLMQEQWEPKMHGCTSIGLHDPLELSEPNACDHFCDKEDSPLGPAEIDELCERLNMGFCN*
Ga0182030_110391782	3300014838	Bog	LHGLRLMQEQWEPKMHGCTSIGLHEPLELSEPNSCDHFCDEEDSPLGPGEIDELCERLNMGFCN*
Ga0182027_100423439	3300014839	Fen	LRLMQEQWEPKMHGCTSIGLHEPLELSEPNSCDHFCDEEDSPLSIDEIDQLCERLNTEICN*
Ga0182027_105705733	3300014839	Fen	LHGLRLMQEQWEPKMHGCTSIGLHEPLELSEPNSCDHFCDEEDSPLNPTEIDDLCERLNMEFCN*
Ga0182027_119171112	3300014839	Fen	RELASVLHGLRLMQEQWEPQIHGCTSIGLHHLEELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLCN*
Ga0187850_102393482	3300017941	Peatland	RELASVLHDLRLMQEQWEPKMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLGPNEIDDLCEKLNMEFCT
Ga0187850_105351292	3300017941	Peatland	IGLHDPLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGFCN
Ga0187847_100573193	3300017948	Peatland	LHGLRLMQEQWEPQMHGCTSIGLHDPQELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLCN
Ga0187847_102476382	3300017948	Peatland	HGCTSIGLHEPLELSEPNSCDHFCDEEDSPLNPTEIDDLCERLNMEFCN
Ga0187872_101111952	3300018017	Peatland	QWEPKMHGCASIGLHEPLELSEPNSCDHFCDEEDSPLGPGEIDELCDRLNTNVCK
Ga0187889_104021041	3300018023	Peatland	HDPLELSEPNSCDHFCDEEDSPLGPNEIDDLCEKLNMEFCT
Ga0187869_105733621	3300018030	Peatland	LHGLRLMQEQWEPKMHGCTTIGLHDPLELSEPNSCDHFCDEEDSPLGPGEIDDLCERLNM
Ga0187875_101504161	3300018035	Peatland	PKMHGCTSIGLHDPLELSEPNSCDHFCDDEDSPLSPDEIDELCEKLNTESCN
Ga0187875_103055811	3300018035	Peatland	TSIGLPEPLELSEPNSCDHFCDDEDSPLSPDEIDELCERLNRGFCD
Ga0187859_107745052	3300018047	Peatland	ELSEPNSCDHFCDEEDSPLGPGEIDDLCERLNMEFCN
Ga0187852_10034551	3300019082	Peatland	ELSEPNSCDHFCDGEDSPLSTTEIDDLCERLNTGICN
Ga0181508_11932872	3300019256	Peatland	LMQEQWEPQIHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLCN
Ga0182025_10455781	3300019786	Permafrost	HARAVGAEDAMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLGPGEIDELCERLNMGFCN
Ga0224528_100103019	3300022861	Soil	CTSIGLHDPLELSEPNSCDHFCDEGDSPLGPSEIDELCERLNIGFCN
Ga0224526_10596512	3300022872	Soil	LHGLRLMQEQWEPKMHGCTSIGLHDPLELSEPNCCDHFCDEEDSPLSPTEIDDLCERLNMGLCN
Ga0224554_10810222	3300023068	Soil	EQWEPKMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLYN
Ga0224555_10048411	3300023088	Soil	SVLHGLRLMQEQWEPKMHGCTSIGLHEPLELSEPNSCDHFCDEEDSPLSIDEIDQLCERLNTEICN
Ga0224555_10089945	3300023088	Soil	SVLHGLRLMQEQWEPKMHGCTSIGLHEPLELSEPNSCDHFCDEEDSPLNPTEIDDLCERLNMEFCN
Ga0224559_11921662	3300023091	Soil	SVLHGLRLMQEQWEPQMHGCTSIGLHDPLELSEPNSCDHFCDEGDSPLSPSEIDELCEKLNTKFCN
Ga0224557_11317973	3300023101	Soil	RLMQEQWEPKMHGCTSIGLHEPLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLCN
Ga0224557_11879201	3300023101	Soil	RELASVLHGLRLMQEQWEPKMHGCTSIGLHEPLELSEPNSCDHFCDEEDSPLNPTEIDDLCERLNMEFCN
Ga0208039_10339971	3300025454	Peatland	MQEQWEPQMHGCTSIGLHDPLELSEPNSCDHFCDGEDSPLSTTEIDDLCERLNTGICN
Ga0208692_11132771	3300025472	Peatland	DDPLELSEPNSCDHFCDGEDSPLSTTEIDDLCERLNTGICN
Ga0255350_11328102	3300026502	Soil	SIGLHDPLELSEPNSCDHFCDEEDSPLGPGEIDDLCERLNMGFCN
Ga0302149_10310241	3300028552	Bog	LASVLHSLRLMQEQWVPQMHGCTSIGLHDPQELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLCN
Ga0302149_11167561	3300028552	Bog	SLELSEPNSCDHFCDEEDSPLSIDEIDQLCERLNTEICN
Ga0302144_100828773	3300028560	Bog	RLMQEQWEPQMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLYN
Ga0302144_102643461	3300028560	Bog	EPQMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLGPGEIDEFCERLNMGFCN
Ga0302151_102394132	3300028562	Bog	LHDPLELSEPNSCDHFCDEEDSPLGPGEIDELCERLNMGFCN
Ga0302267_100182541	3300028745	Bog	LRLMQEQWEPTMHGCSSISLHEPQELSEPNSCDHFCDEEDSPLNPTEIDELCERLNTEIR
Ga0302267_104163442	3300028745	Bog	QEQWEPQMRGCTSIGLHDPLELSEPNSCDHFCDEEDSPLGPDEIDDLCERLNMGFCN
Ga0302202_100222367	3300028762	Bog	PLELSEPNSCDHFCDEGDSPLGPSEIDELCERLNIGFCN
Ga0302202_100629395	3300028762	Bog	ASVLHGLRLMQEQWEPKMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLYN
Ga0302202_102140162	3300028762	Bog	SLHEPQELSEPNSCDHFCDEEDSPLNPTEIDELCERLNTEIRN
Ga0302201_101917761	3300028785	Bog	QEQWEPKMHGCTSIGLHEPLELSEPNSCDHFCDEEDSPLSIDEIDQLCERLNTEICN
Ga0302189_100398645	3300028788	Bog	LMQEQWEPKMHGCTSIGLHEPLELSEPNSCDHFCDEEDSPLSIDEIDQLCERLNTEICN
Ga0265338_102060753	3300028800	Rhizosphere	ASVLHGLRLMQEQWQPKMHVCTSIGLHEPLELSEPNSCDHFCDDEDSPLGPDELDELCERLNMEFCN
Ga0302199_11934721	3300028860	Bog	GLHDPLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLYN
Ga0302278_103012851	3300028866	Bog	MHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPAEIDDLCERLNMGLCN
Ga0311327_100810925	3300029883	Bog	RRELASVLHGLRLMQEQWEPKMHGCTSIGLHEPLELSEPNSCDHFCDEEDSPLSIDEIDQLCERLNTEICN
Ga0311327_108946511	3300029883	Bog	VLHGLRLMQEQWEPQMHGCTSIGLHDPLELSEPNSCDHFCDEGDSPLSPSEIDELCEKLNTKFCN
Ga0311329_104883812	3300029907	Bog	KMHGCTSIGLHEPLELSEPNSCDHFCDDEESPLSPDEIDELCDRLNTGICN
Ga0311369_106197062	3300029910	Palsa	HGCTSIGLHDPLELSEPNSCDHFCDEEDSPLGPGEIDELCERLNMGFCN
Ga0311362_100964836	3300029913	Bog	DPLELSEPNSCDHFCDEGDSPLGPSEIDELCERLNIGFCN
Ga0311362_101419831	3300029913	Bog	RLMQEQWEPQMHGCTSIGLHDPLELSEPNSCDHFCDEGDSPLSPSEIDELCEKLNTKFCN
Ga0311359_102039044	3300029914	Bog	MHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPAEIDDLCERFNMGLCN
Ga0311326_105672952	3300029917	Bog	EPQMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPAEIDDLCERLNMGLCN
Ga0302143_10151251	3300029918	Bog	CTSIGLHDPLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLCN
Ga0302141_10466601	3300029919	Bog	RLMQEQWEPQMHGCTSIGLHDPLELSEPNSCDHFCDEGDSPLGPSEIDELCERLNIGFCN
Ga0302142_12494362	3300029920	Bog	PLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLYN
Ga0311363_109156101	3300029922	Fen	LHGLRLMQEQWEPKMQGCTSIGLHDPLELSEPNSCDHFCDEEDSPLGPGEIDELCERLNMEIYN
Ga0311330_101500773	3300029945	Bog	LHHPEELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLCN
Ga0302190_101684283	3300029988	Bog	LASVLHGLRLMQEQWEPKMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLYN
Ga0302186_100286285	3300030004	Bog	SVLHGLRLMQEQWEPKMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLYN
Ga0302186_101645151	3300030004	Bog	ELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGLCN
Ga0311344_113575212	3300030020	Bog	GCTSIGLHDPLELSEPTSCDHFCDEEDSPLGAGEIDDLCERLNMGFCN
Ga0302281_100232284	3300030044	Fen	LHDPLELSEPNSCDHFCDEEDSPLGPGEIDDLCERLNMGFCN
Ga0302281_104318902	3300030044	Fen	QWEPKMQGCTSIGLHDPLELSEPNSCDHFCDEEDSPLGPGEIDELCERLNMEIYN
Ga0302282_13515052	3300030045	Fen	GLHDPLELSEPNCCDHFCDEEDSPLSPTEIDDLCERLNMGLCN
Ga0302191_103949022	3300030049	Bog	IGLHDPLELSEPNACDHFCDKEDSPLGPAEIDELCERLNMGFCN
Ga0302195_101511844	3300030051	Bog	LELSEPNSCDHFCDEGDSPLGPSEIDELCERLNIGFCN
Ga0302192_103904052	3300030507	Bog	ELSEPNSCDHFCDEEDSPLSPDEIDQLCERLNTEICN
Ga0302193_100865071	3300030519	Bog	MRGCTSIGLHDPLELSEPNSCDHFCDEEDSPLGPDEIDDLCERLNMGFCN
Ga0302318_100448853	3300031258	Bog	LMQEQWEPKMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLGPGEIDDLCERLNMGFCN
Ga0302318_106160602	3300031258	Bog	CTSIGLHDPLELSEPNSCDHFCDEEDSPLGPDEIDDLCERLNMGFCN
Ga0302140_100993381	3300031261	Bog	QMHGCTSIGLHDPLELSEPNSCDHFCDEGDSPLSPSEIDELCEKLNTKFCN
Ga0302140_109280431	3300031261	Bog	SEPNSCDHFCDEGDSPLGPSEIDELCERLNIGFCN
Ga0302320_107412203	3300031524	Bog	MHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPAEIDDLCE
Ga0307374_103047351	3300031670	Soil	PQMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPTEIDDLCERLNMGFCN
Ga0302319_105727813	3300031788	Bog	PKMHGCTSIGLHEPLELSEPNSCDHFCDEEDSPLSPDEIDELCEKLNTESCN
Ga0334828_162292_317_493	3300033822	Soil	MQEQWEPKMHGCTSIGLHDPLELSEPNSCDHFCDEEDSPLSPDEIDDLCERLNTGFCN
Ga0326724_0605463_2_148	3300034091	Peat Soil	GCAAIDLRKTLELSEPNSCDHFCDEEDSPLSPGEIDELCDRLNAGLCN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102385

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences