Metagenome Family F102380

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102380
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	55 residues
Representative Sequence	MSSEELLSSIIPFAGSGLGYAMGFALKKILKWMLIIVGFLAGMFFVGVQLLQ
Number of Associated Samples	34
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.24 %
% of genes near scaffold ends (potentially truncated)	65.35 %
% of genes from short scaffolds (< 2000 bps)	92.08 %
Associated GOLD sequencing projects	33
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.307 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (57.426 % of family members)
Environment Ontology (ENVO)	Unclassified (69.307 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (94.059 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.25% β-sheet: 0.00% Coil/Unstructured: 38.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF09853	DUF2080	4.95
PF11535	Calci_bind_CcbP	1.98
PF09851	SHOCT	0.99
PF14947	HTH_45	0.99
PF06863	DUF1254	0.99
PF01904	DUF72	0.99
PF00296	Bac_luciferase	0.99
PF00583	Acetyltransf_1	0.99
PF00571	CBS	0.99
PF00589	Phage_integrase	0.99
PF00561	Abhydrolase_1	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.99
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.99
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.31 %
All Organisms	root	All Organisms	30.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.31 %
cellular organisms	root	All Organisms → cellular organisms	30.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.31 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	26.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.31 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	8.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.99 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.31 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	7.92 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	0.99 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.31 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	6.93 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	0.99 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.99 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.31 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	6.93 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	0.99 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.99 %
Desulfurococcales	order	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales	0.99 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.99 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.31 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	6.93 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.99 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.99 %
Desulfurococcaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae	0.99 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.99 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.31 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	3.96 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1.98 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	0.99 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.99 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.99 %
Aeropyrum	genus	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → Aeropyrum	0.99 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.99 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.31 %
unclassified Nitrososphaera	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera	2.97 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1.98 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	0.99 %
Rhodopseudomonas palustris TIE-1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris → Rhodopseudomonas palustris TIE-1	0.99 %
Aeropyrum camini	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → Aeropyrum → Aeropyrum camini	0.99 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.99 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.99 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.31 %
Nitrososphaera sp. AFS	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	2.97 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1.98 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	0.99 %
Rhodopseudomonas palustris TIE-1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris → Rhodopseudomonas palustris TIE-1	0.99 %
Aeropyrum camini	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → Aeropyrum → Aeropyrum camini	0.99 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.99 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.99 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1013550	All Organisms → cellular organisms → Archaea	1309	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1014303	Not Available	1273	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10095258	Not Available	736	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10113017	Not Available	665	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1102114	Not Available	503	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10117062	Not Available	558	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10122036	Not Available	544	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1017624	All Organisms → cellular organisms → Archaea	753	Open in IMG/M
3300005332\|Ga0066388_100630714	Not Available	1690	Open in IMG/M
3300005332\|Ga0066388_100818436	Not Available	1521	Open in IMG/M
3300005332\|Ga0066388_101041638	Not Available	1377	Open in IMG/M
3300005332\|Ga0066388_107235657	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → Aeropyrum → Aeropyrum camini	558	Open in IMG/M
3300009304\|Ga0116588_1057278	Not Available	881	Open in IMG/M
3300009304\|Ga0116588_1174562	Not Available	543	Open in IMG/M
3300010046\|Ga0126384_10068525	All Organisms → cellular organisms → Archaea	2513	Open in IMG/M
3300010046\|Ga0126384_10205863	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1561	Open in IMG/M
3300010046\|Ga0126384_10496454	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1051	Open in IMG/M
3300010048\|Ga0126373_10370678	Not Available	1449	Open in IMG/M
3300010048\|Ga0126373_10969089	Not Available	916	Open in IMG/M
3300010048\|Ga0126373_11164966	Not Available	837	Open in IMG/M
3300010048\|Ga0126373_11366383	All Organisms → cellular organisms → Archaea	774	Open in IMG/M
3300010048\|Ga0126373_12327747	Not Available	596	Open in IMG/M
3300010048\|Ga0126373_13083185	Not Available	519	Open in IMG/M
3300010358\|Ga0126370_12558530	Not Available	510	Open in IMG/M
3300010360\|Ga0126372_11386483	All Organisms → cellular organisms → Archaea	735	Open in IMG/M
3300010360\|Ga0126372_11978500	Not Available	629	Open in IMG/M
3300010361\|Ga0126378_10819339	All Organisms → cellular organisms → Archaea	1040	Open in IMG/M
3300010361\|Ga0126378_10862798	Not Available	1013	Open in IMG/M
3300010361\|Ga0126378_12142731	Not Available	638	Open in IMG/M
3300010361\|Ga0126378_12873223	Not Available	550	Open in IMG/M
3300010366\|Ga0126379_12049171	Not Available	674	Open in IMG/M
3300010366\|Ga0126379_13129049	Not Available	554	Open in IMG/M
3300010366\|Ga0126379_13514610	Not Available	525	Open in IMG/M
3300010366\|Ga0126379_13848874	Not Available	503	Open in IMG/M
3300010366\|Ga0126379_13867603	Not Available	501	Open in IMG/M
3300010376\|Ga0126381_100062775	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	4599	Open in IMG/M
3300010376\|Ga0126381_100331592	Not Available	2096	Open in IMG/M
3300010376\|Ga0126381_100525837	All Organisms → cellular organisms → Archaea	1672	Open in IMG/M
3300010376\|Ga0126381_100552800	Not Available	1631	Open in IMG/M
3300010376\|Ga0126381_100778427	Not Available	1373	Open in IMG/M
3300010376\|Ga0126381_100835825	Not Available	1323	Open in IMG/M
3300010376\|Ga0126381_101067992	All Organisms → cellular organisms → Archaea	1166	Open in IMG/M
3300010376\|Ga0126381_101200686	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	1096	Open in IMG/M
3300010376\|Ga0126381_101489950	Not Available	978	Open in IMG/M
3300010376\|Ga0126381_102244171	Not Available	785	Open in IMG/M
3300010376\|Ga0126381_102747738	Not Available	703	Open in IMG/M
3300010376\|Ga0126381_103004708	Not Available	670	Open in IMG/M
3300010376\|Ga0126381_103015217	All Organisms → cellular organisms → Archaea	669	Open in IMG/M
3300010376\|Ga0126381_103977587	Not Available	575	Open in IMG/M
3300010376\|Ga0126381_104974312	Not Available	510	Open in IMG/M
3300010379\|Ga0136449_100535916	All Organisms → cellular organisms → Bacteria → Proteobacteria	2019	Open in IMG/M
3300010398\|Ga0126383_11478328	Not Available	769	Open in IMG/M
3300010398\|Ga0126383_12758275	Not Available	574	Open in IMG/M
3300010398\|Ga0126383_12799610	Not Available	570	Open in IMG/M
3300010398\|Ga0126383_13118714	Not Available	541	Open in IMG/M
3300010398\|Ga0126383_13278108	Not Available	529	Open in IMG/M
3300012089\|Ga0153924_1041670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris → Rhodopseudomonas palustris TIE-1	898	Open in IMG/M
3300012150\|Ga0153945_1087390	Not Available	511	Open in IMG/M
3300012677\|Ga0153928_1015280	All Organisms → cellular organisms → Archaea	1946	Open in IMG/M
3300012677\|Ga0153928_1036727	Not Available	1004	Open in IMG/M
3300012948\|Ga0126375_10255289	Not Available	1190	Open in IMG/M
3300012948\|Ga0126375_11024304	Not Available	674	Open in IMG/M
3300012948\|Ga0126375_11027203	All Organisms → cellular organisms → Archaea	673	Open in IMG/M
3300012948\|Ga0126375_11938808	Not Available	518	Open in IMG/M
3300012971\|Ga0126369_10682119	All Organisms → cellular organisms → Archaea	1104	Open in IMG/M
3300012971\|Ga0126369_12823250	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	569	Open in IMG/M
3300012971\|Ga0126369_12964675	Not Available	556	Open in IMG/M
3300016341\|Ga0182035_11329657	All Organisms → cellular organisms → Archaea	644	Open in IMG/M
3300017959\|Ga0187779_10157887	Not Available	1401	Open in IMG/M
3300017959\|Ga0187779_10233165	Not Available	1161	Open in IMG/M
3300017959\|Ga0187779_10760323	Not Available	659	Open in IMG/M
3300017966\|Ga0187776_10734808	Not Available	702	Open in IMG/M
3300017973\|Ga0187780_10098096	Not Available	2018	Open in IMG/M
3300017973\|Ga0187780_10296341	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1137	Open in IMG/M
3300017973\|Ga0187780_10922453	Not Available	635	Open in IMG/M
3300017974\|Ga0187777_10063003	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2396	Open in IMG/M
3300017974\|Ga0187777_10166446	Not Available	1476	Open in IMG/M
3300017974\|Ga0187777_10592016	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	781	Open in IMG/M
3300017999\|Ga0187767_10009327	All Organisms → cellular organisms → Archaea	1885	Open in IMG/M
3300017999\|Ga0187767_10117784	Not Available	759	Open in IMG/M
3300018058\|Ga0187766_10916014	Not Available	619	Open in IMG/M
3300018058\|Ga0187766_11328318	Not Available	525	Open in IMG/M
3300018058\|Ga0187766_11405093	Not Available	512	Open in IMG/M
3300018060\|Ga0187765_10656712	Not Available	684	Open in IMG/M
3300018060\|Ga0187765_11012979	Not Available	570	Open in IMG/M
3300018085\|Ga0187772_10470925	Not Available	882	Open in IMG/M
3300018468\|Ga0066662_11542039	Not Available	692	Open in IMG/M
3300021560\|Ga0126371_10106890	Not Available	2798	Open in IMG/M
3300021560\|Ga0126371_10125076	All Organisms → cellular organisms → Archaea	2602	Open in IMG/M
3300021560\|Ga0126371_10230165	Not Available	1961	Open in IMG/M
3300021560\|Ga0126371_10257318	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1862	Open in IMG/M
3300021560\|Ga0126371_10594057	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300021560\|Ga0126371_11985903	Not Available	699	Open in IMG/M
3300021560\|Ga0126371_12201214	Not Available	665	Open in IMG/M
3300021560\|Ga0126371_12556098	Not Available	618	Open in IMG/M
3300021560\|Ga0126371_12952422	Not Available	576	Open in IMG/M
3300021560\|Ga0126371_13130265	All Organisms → cellular organisms → Archaea	560	Open in IMG/M
3300031708\|Ga0310686_100427498	All Organisms → cellular organisms → Archaea	752	Open in IMG/M
3300031708\|Ga0310686_107997828	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	643	Open in IMG/M
3300031708\|Ga0310686_112354372	Not Available	502	Open in IMG/M
3300032160\|Ga0311301_10444768	Not Available	1956	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.04%
Host-Associated	Host-Associated	3.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.06%
Fungi	Host-Associated → Fungi	3.96%
Aquatic	Environmental → Aquatic	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.06%
Mycelium	Host-Associated → Fungi → Mycelium	3.96%
Sediment	Environmental → Aquatic → Sediment	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.82%
Loam	Environmental → Terrestrial → Soil → Loam	3.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	62.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.99%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	57.43%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	17.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.96%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.97%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	1.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300009304	Microbial communities from sediment of the River Tyne Estuary, UK ? Pasteurized_176d_2 SPAdes	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012089	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaG	Host-Associated	Open in IMG/M
3300012150	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ029 MetaG	Host-Associated	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10135504	3300000580	Forest Soil	MSSEALLSSIIPFAGSGLVGYAIGFALKRILKLMLIIVGFLAGMFFVGVQLL
AF_2010_repII_A01DRAFT_10143033	3300000580	Forest Soil	MSSEVLLSNIIPFAGLFGYAMGFALKKILRWMPIIVGFLAGMFFSILVLYPINV*
AF_2010_repII_A1DRAFT_100952581	3300000597	Forest Soil	MSSEALLFNIVPFAGSGLRGYAMGLALKKVLKWML*
AF_2010_repII_A1DRAFT_101130171	3300000597	Forest Soil	MSSEVLLSNIIPFAGLFGYAMGFALKKILRWMPIIVGFLAGMFFSILVLYPIN
AF_2010_repII_A100DRAFT_11021142	3300000655	Forest Soil	MSSEPLLSSVIPFAGSGLLGYAMGFALKKVLTWMLIIIGFLAGMFFVGVQLQKYGYVSSVNYLKR
AF_2010_repII_A001DRAFT_101170622	3300000793	Forest Soil	LSNEVLLSNIIPFAGSGLVGYXIGFALKKXLKWMLIIVGFLAGTFFVGVQLLQKYGYTST
AF_2010_repII_A001DRAFT_101220361	3300000793	Forest Soil	MSSEPLLSSIIPFAGSGLVGYILGFELKKIIKWLLIGLDVLAGIFFIVIQWMTN
AF_2010_repII_A10DRAFT_10176241	3300000816	Forest Soil	MSSESLLSNIIPFAGSGLLGYAMGFALKKILKWMLIVVGFVAGMFFVGVQLLQRYG
Ga0066388_1006307144	3300005332	Tropical Forest Soil	MSNEALLTSIIPFAGSGLVSYVMGFAQTKILKWMLIIIGFLAGMFFVGVQLLQKYGYVSTVNWDYLP*
Ga0066388_1008184363	3300005332	Tropical Forest Soil	MSQNIMRSENQMSSESLLSSIIPFAGSGLLGYAMGFALKKILKWMLIIVGFIAGIFFVGVQLLPLKVWLCELS*
Ga0066388_1010416384	3300005332	Tropical Forest Soil	MSSEPLLFTIIPFAGSGLLGYAMGFALKKILKWMLIIVAS*
Ga0066388_1072356571	3300005332	Tropical Forest Soil	LLSSIITFAGSGLLGYAMGFALKKVLKWMLIIIGFLAGMFFVGVQLL
Ga0116588_10572781	3300009304	Sediment	MSSEVLLSNIIPFAGSGLVGYAIGFALKKILKWILIIVGFLCGMFFLGVELLQKYAYV
Ga0116588_11745621	3300009304	Sediment	MSSEPLLSSIIPFAGSGLLGYAMGFALKKILKWMLIIVGFLAGMFF
Ga0126384_100685251	3300010046	Tropical Forest Soil	MSQNILRSQEKHMSNEALLTSIIPFAGSGLVSYVMGFAQTKILKWMLIIIGFLAGMFFVGVQLLQKYGYVSTVNWD*
Ga0126384_102058631	3300010046	Tropical Forest Soil	GSGLLGYAMGFALKKILKWMLIISGFSAGMFFIGVQLLQRYGYGARG*
Ga0126384_104964541	3300010046	Tropical Forest Soil	MSSEALLSNIIPFAGSGLVGYAIGFALKKILKWTLIIVGFLAGMFFVGVQLLQKYEYVSSVN*
Ga0126373_103706781	3300010048	Tropical Forest Soil	LFHAVGLEGEWLRSYIPNISQNMLRREQQMSNEALLSNITPFAGSGLLGYAMGFALKKILKWMLIIIGFLAGMFFVGVQLLQKYGYV
Ga0126373_109690891	3300010048	Tropical Forest Soil	MASEVLLSNIISSVGSGLVSYAIGFALKKILKWMLIIVVSWLE*
Ga0126373_111649661	3300010048	Tropical Forest Soil	VKPLLSSIIPFAGSGLLGYAMGFALKKVLKWMLITIGFLGGMFFVGVQL
Ga0126373_113663831	3300010048	Tropical Forest Soil	MLRAKKIMTSEALLSSVIPFAGSGLFGYAMGFALKKILKWMLIKY
Ga0126373_123277471	3300010048	Tropical Forest Soil	MSSEVLLSNVIPFAGSGLVGFAIGFALKKILKWMLIIVGFLAGMIFVGVQILQ
Ga0126373_130831852	3300010048	Tropical Forest Soil	MVNEVLLSNIIPFAGSGLVGYAIGFALKKILKWMLIIIGFLAGMFFVGVQLLQKYANYVSNVN*
Ga0126370_125585302	3300010358	Tropical Forest Soil	MSSEELLSSIIPFAGSGLLGYAMGFALKKILRWMLIIVGFLAGMFFVGVQLLQK
Ga0126372_113864833	3300010360	Tropical Forest Soil	LSNEVLLSNIIPFAGSGLVGYAIGFALKKILKWMLIIVGFLAGTFFVGVQLLQKYGYA
Ga0126372_119785001	3300010360	Tropical Forest Soil	MSSEALLSNIIPFAGSGLLGYAMGFALKKILKWMLIIVGF
Ga0126378_108193392	3300010361	Tropical Forest Soil	MSSETLLSGIIPFAGSGVGYAMGFALKKILKWMLIIVGFLAGMFFVGIQLLQK*
Ga0126378_108627981	3300010361	Tropical Forest Soil	MSSEALLSNIVPFAGSGLLVYAMDFALKKILKWMLIIVGFLAGIFFVGV
Ga0126378_121427312	3300010361	Tropical Forest Soil	VNQAKQMSSEVLLSNIIPFAGLFGYAMGFALKKILRWMPIIVGFLAGMFFSILVLYPINV
Ga0126378_128732231	3300010361	Tropical Forest Soil	MSSEALLSNIIPFAGSGLQRYAMGFALKKILKWMLIIVDFLAGM
Ga0126379_120491711	3300010366	Tropical Forest Soil	MSSEVLLSNVIPFAASGLVGYAIGFAMKKNLKWMLIIVGF
Ga0126379_131290491	3300010366	Tropical Forest Soil	MSSETLLSNIIPFAGSGLGYAMGFALKKVLKWMLIIVGFLAGMFFVGVHLLQRYGYVSSV
Ga0126379_135146101	3300010366	Tropical Forest Soil	MLRREQQMSNEALLSNITPFAGSGLLGYAMGFALKKILKWMLIIIGFLAGMFFVGV
Ga0126379_138488742	3300010366	Tropical Forest Soil	MSSETLLSNIIPFAGSGLLGYAMGFALKKVLKWMLIIIGFLAGMFFVGVQLQKYGYVSSGNWD*
Ga0126379_138676031	3300010366	Tropical Forest Soil	MSSEPLLSSIIPFAGSGLLGYAMGFALKKILKWVLIIVGFLGGMF
Ga0126381_1000627752	3300010376	Tropical Forest Soil	MWSEEKMSSEPLLSSIIPFAGSGLLGYAMGFALKKVLKWMLIIIGFLAGMFFVGVQLLQKYG*
Ga0126381_1003315924	3300010376	Tropical Forest Soil	MKVTSEALLSNIIPFAGSGLLGYAMGFAMKKILKWTLIIVGFLAG
Ga0126381_1005258372	3300010376	Tropical Forest Soil	MSSEALLSSVIPFAGSGLLGYAMGFALKKILKWMLI
Ga0126381_1005528001	3300010376	Tropical Forest Soil	MSQNILRSQEKHMSNEALLTSIIPFAGSGLVSYVMGFAQTKILKWMLIIIGFLAGMFFVGVQLLQKYGYVSTVNWDYLP*
Ga0126381_1007784273	3300010376	Tropical Forest Soil	LSGIIPFAGSGLGYAIGFALKKILKWMLIIVGFLAGMFFVGIQLLQK*
Ga0126381_1008358251	3300010376	Tropical Forest Soil	MSSEPLLSNIIPFAGSGLLGYAMGFALKKILKSMLIIVGFLAGMFFVGVQLLQKYGYVS
Ga0126381_1010679921	3300010376	Tropical Forest Soil	MSSEVLLSNIIPFAGSGLLGYAMGFALKKIFKWILIIMGFLVGMFFI
Ga0126381_1012006862	3300010376	Tropical Forest Soil	MVSLLFNIIPFAGSGLLGYAMEFALKKVSKWMLIIVDFLAGMFFVGVQLLQEYGYRRTVNWDYLP*
Ga0126381_1014899502	3300010376	Tropical Forest Soil	MSSETLLSGIIPFAGSGLGYAMGFALKKILKWMLIIVGFLVGMFFVGIQLLQK*
Ga0126381_1022441711	3300010376	Tropical Forest Soil	LNIPQNILRSEKQMSSEPLLSSIIPFAGSGLLGYAMGFALKKVLKWILIIIGFLAGMFFVGVQLLQKYGYVS
Ga0126381_1027477381	3300010376	Tropical Forest Soil	MSSEALLSSVIPFAGSGLLGYAMGFALKKILKWMLIVVGFIAGMFFVGVQLLHKFGYVGALG*
Ga0126381_1030047082	3300010376	Tropical Forest Soil	MSSEPLLSSVIPFAGSGLLGYAMGFALKKVLTWMLIIIGFLAGMFFVGVQLQKYGYVSSGNWD*
Ga0126381_1030152172	3300010376	Tropical Forest Soil	MGKGNNMSSEVLLSIIIPFVGSGLMDYAIGFALKKILKWILIIVGFLAAMFFVGVQLLQKYVSTVNWD*
Ga0126381_1039775871	3300010376	Tropical Forest Soil	MSSETLLSNIIPFAGSGLGYAMGFALKKVLKWMLIIVGFLA
Ga0126381_1049743121	3300010376	Tropical Forest Soil	MSSEPLLSSIIPFAGSGLRYAMGFALKKILKWMLIVVGFLAGMFFLGIQLLQ
Ga0136449_1005359162	3300010379	Peatlands Soil	MSSETLLSSIIPFADSGLLGYAMGFALKKILKWLLIIVGF
Ga0126383_114783281	3300010398	Tropical Forest Soil	MWSVNQMSSEPLLSSVIPFAGSGLLGYAMGFALKKVLKWMLIIISFLA
Ga0126383_127582751	3300010398	Tropical Forest Soil	MSSEVLLSSVIPFAGSGLLGYAMGFALKKILKWMLMLTK*
Ga0126383_127996101	3300010398	Tropical Forest Soil	MSNEFLLSNIIPFTGSGFLGYAMGFALKKILKRMLIIVGVLAGM
Ga0126383_131187141	3300010398	Tropical Forest Soil	MGSDALLSNIIPFAGSGLGYAMGFAMKKILKWTLIIVGFLAGMFFVGMMVLKKLNRYLVL
Ga0126383_132781081	3300010398	Tropical Forest Soil	MSSELLLSSIIHFAGSGLLGYAMGFALKKVLKWMLIIVGFLAGML
Ga0153924_10416702	3300012089	Attine Ant Fungus Gardens	QNIQRSEEKMSSEALLSNIIPFAGSGLLVYAMGFALKKIFMWMLIIIGFLAGMFFVGIQLLQKYGYVSAVNWDYLP*
Ga0153945_10873901	3300012150	Attine Ant Fungus Gardens	MSSEALLSSIIPFAGSGLLGYAMGFAFKKILKWMLIIVGFLAG
Ga0153928_10152804	3300012677	Attine Ant Fungus Gardens	SSIIPFAGSGLVGYAMGLALKKILKWMLIIIGFVAGMFFVGVQLLQKYGYVGAGIQYLKTSNV*
Ga0153928_10367271	3300012677	Attine Ant Fungus Gardens	MSSEALLSNIIPFAGSGLLGYAMGFALKKVLKWMLIVVGFLAGMFFVG
Ga0126375_102552891	3300012948	Tropical Forest Soil	MSQNILRSQEKHMSNEALLTSIIPFAGSGLVSYVMGFARTKILKWMLIIIGFLAGMFFVGVQLLQKYGYVSTVNWDYLP*
Ga0126375_110243042	3300012948	Tropical Forest Soil	MVSILSNIIPLAGSGLLRFAMGFALKKILKWIIINVGFVAGIFFVGIQHLQKYGYESMVI
Ga0126375_110272031	3300012948	Tropical Forest Soil	MSNEPLLSSIIPFTGSGLLGYAMGFAMKKILKWMLIIVGFLAGMFFVGIQLLQKVI*
Ga0126375_119388081	3300012948	Tropical Forest Soil	KMTSEDLLSSIIPFAGSGLLGYAMGFALKKILKWMLIIVGFIAGIFFVGVQLLPLKVWLCELS*
Ga0126369_106821193	3300012971	Tropical Forest Soil	LSNIIPFVGSGILGYAMGFALKKVLKWILIIIGFVAGIFFVGVQLLQ
Ga0126369_128232501	3300012971	Tropical Forest Soil	MVSLLSNIVPFAGSGLLVYAMDFALKKILKWMLIIVGFLAGIFFVGVQLLQKYGYVSTINWDYLP
Ga0126369_129646751	3300012971	Tropical Forest Soil	MWSENRMSSETLLSSVIPFAGSGLLGYAMGFALKKILKWMLIVICFIAGMFFVG
Ga0182035_113296571	3300016341	Soil	VASEVLLSNIIPFVGSGLVGYTIGFALKKILKLMLIIVGFLAGIFFVGVQLLQRYGYV
Ga0187779_101578871	3300017959	Tropical Peatland	MSSEPLLSSIIPFAGSGLLGYAMSFALKKILAGMFFVGVQLLQKYGYVSTVNW
Ga0187779_102331652	3300017959	Tropical Peatland	VKVLLSNIIPFVGSGLVGYAMGFALKKILKSMLILIGFLAGMLFVGIQLL
Ga0187779_107603231	3300017959	Tropical Peatland	MSSEALLSSVIPFAGSGLLGYAMGFALKKILKWMLIMVGFLAGIFFVGVQLLQKYGYVS
Ga0187776_107348081	3300017966	Tropical Peatland	MSSEVLLLSNIIPFAGSGLVGYAIGFALKKILKWILIIVG
Ga0187780_100980962	3300017973	Tropical Peatland	LHSFIPNISQNILRSEKKISTEPLLSSIIPFAGSGLGYAMSFALKKILAGMFFVGVQLLQKYGYVSTVNWDNLP
Ga0187780_102963411	3300017973	Tropical Peatland	MSSEPLLSNIIPFAGSGLLGYAMGLALKKVLLVIVGFIVGMFFVGVQLLH
Ga0187780_109224531	3300017973	Tropical Peatland	LSSEALLSNIIPFAGSGLVGYAIGFALKKILKLMLIIVGFLAGMFFVGVQLLQ
Ga0187777_100630031	3300017974	Tropical Peatland	MSSEVLLSNIIPFAGSGLVGYAIGFALKKALKWMLIIVGFLAG
Ga0187777_101664462	3300017974	Tropical Peatland	LHSFIPNISQNILRSEKKISSEPLLSSIIPFAGSGLGYAMSFALKKILAGMFFVGVQLLQKYGYVSTVNWDNLP
Ga0187777_105920162	3300017974	Tropical Peatland	MSNEALLSNIVPFAGSGYAMDFALKKILKLMLIIIGFLTGMFFVGLQLLQKYGYVSAVTWDYLP
Ga0187767_100093272	3300017999	Tropical Peatland	VKVLLSNIIPFVGSGLVGYAMGFALKKILKSMLIVIGFLAGMLFVGIQLL
Ga0187767_101177841	3300017999	Tropical Peatland	MSSELLFSNMIPFAGFGLIGYGIGFAFKKVLKWMLI
Ga0187766_109160141	3300018058	Tropical Peatland	LHSFIPNISQNILRSEKKISSEPLLSSIIPFAGSGLLGYAMSFALKKILAGMFFVGVQLLQKYGYVSAVNWD
Ga0187766_113283181	3300018058	Tropical Peatland	MSSETLLSGIIPFAGSGLGYAMGFALKKILKWMLIIVGFLAGMFFVGIQLLQK
Ga0187766_114050931	3300018058	Tropical Peatland	MSSEPLLSSIIQFAGSGLLGYAMGFALKKILKWKLIVVGFIAGMFFVGVQLLQKYGYVS
Ga0187765_106567123	3300018060	Tropical Peatland	MSSEELLSSIIPFAGSGLGYAMGFALKKILKWMLIIVGFLAGMFFVGVQLLQ
Ga0187765_110129791	3300018060	Tropical Peatland	VKVLLSNIIPFVGSGLVGYAMGFALKKILKSMLILIGFLAGMLFVGIQLLQKYGYVSTVNRDYLP
Ga0187772_104709251	3300018085	Tropical Peatland	VIAFLHSEYISKHPEEQKKMSSEPLLSSIIPFAGSGLLGYAMSFAFKKILAGMFFVGVQLLQKYGYVSAVNWD
Ga0066662_115420391	3300018468	Grasslands Soil	MASEVLLSNIIPFAGSGLVGYAIGFALKKILKWILIIVGFLVGLFFLGV
Ga0126371_101068904	3300021560	Tropical Forest Soil	MSQNIMWNENQMSSEPLLSSIIPFAGSGLGYAMGFALKKVLKWMFIIIGFLAGMFFVGVERCKNMVM
Ga0126371_101250761	3300021560	Tropical Forest Soil	MSSEPLLSNIIPFAGSGLLGYAMGFALKKVLKWLLIIVGFLAGMF
Ga0126371_102301654	3300021560	Tropical Forest Soil	MSSEALLSNIVPFAGSGLLVYDMDFPLKKIPKWMLIIVGFLAGIFFVGVQLLQKYGYVSTINWDYLP
Ga0126371_102573182	3300021560	Tropical Forest Soil	MSSEVLLSNIIPFAGLFGYAMGFALKKILRWMPIIVGFLAGMFFSILVLYPINV
Ga0126371_105940572	3300021560	Tropical Forest Soil	MSSEALLSSVIPFAGSGLLGYAMGFVLKKTENWMIIIVGFLAGMFFVGVQLCAKIWVCKR
Ga0126371_119859032	3300021560	Tropical Forest Soil	MSSEPVMFSILPFAGSGLVGYVIGFALKKVLKWMLIIIGFLAGMFFVGVRLLQKYGYV
Ga0126371_122012141	3300021560	Tropical Forest Soil	MSSEPLLSSIITFAGSGLLGYAMGFALKKVLKWMLIIIGFLAGMF
Ga0126371_125560981	3300021560	Tropical Forest Soil	MSSEPLFSSIIPFAGSGLLGYAMGFALKKILKWILIIVGFLAGMFFFGVQLLQKYRYVSSVNW
Ga0126371_129524221	3300021560	Tropical Forest Soil	MSSEPLLSSIKPFAGSGLLGYAMGFALKKVLKWMLIIIGFLAGMFFVGVQ
Ga0126371_131302651	3300021560	Tropical Forest Soil	MSSEHLLSNIIPFAGSGILGYAMGFALKKVLKWMLII
Ga0310686_1004274981	3300031708	Soil	MSSEALLSNIIPFAGSGLVGYAMDFALNKIFKWMLIIVGFLAGMFFLDIQLLQKYEYVSAVNWDYLP
Ga0310686_1079978281	3300031708	Soil	VSSEALLSSIIPFAGSGLLGYAMGFALSKILKWMLIIVGFLA
Ga0310686_1123543721	3300031708	Soil	MSSEVLLSNIIPFAGSGLVGYAIGFTLRKVLKWSLIIVGFLVGMFFVA
Ga0311301_104447682	3300032160	Peatlands Soil	MSSETLLSSIIPFADSGLLGYAMGFALKKILKWMLIIIGFFAGMFFV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102380

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences