Metagenome / Metatranscriptome Family F102137

Basic Information
Family ID	F102137
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	61 residues
Representative Sequence	VYVLVPEQTGSGLTTGPVIVVGAPQELFTVGGVGTVCALLIQATVALPGAGAEIVGGDTV
Number of Associated Samples	66
Number of Associated Scaffolds	93

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (35.294 % of family members)
Environment Ontology (ENVO)	Unclassified (42.157 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.176 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 12001272637 24MG_02675470 3YBBDRAFT_11772303 4Ga0062591_1026488661 5Ga0065712_103212103 6Ga0105243_104588462 7Ga0111538_116175831 8Ga0111538_118462671 9Ga0111538_125849981 10Ga0105097_108653982 11Ga0114942_11515492 12Ga0114942_13791081 13Ga0105237_117875111 14Ga0105238_128253312 15Ga0105249_108063721 16Ga0105249_120292041 17Ga0105340_13869342 18Ga0105252_101235052 19Ga0116249_108007661 20Ga0116249_117662851 21Ga0116249_117662852 22Ga0137326_10189332 23Ga0137326_10376721 24Ga0137326_11119931 25Ga0137326_11119932 26Ga0137462_10889971 27Ga0137423_12433021 28Ga0137428_12478971 29Ga0137426_10928951 30Ga0137457_12286032 31Ga0137431_11607641 32Ga0137421_10357151 33Ga0137350_10735591 34Ga0137357_11162171 35Ga0137449_10513681 36Ga0138256_1000619310 37Ga0136612_105250512 38Ga0157304_10033201 39Ga0157304_10317302 40Ga0157304_10574962 41Ga0157281_10005033 42Ga0157305_100980151 43Ga0157305_100980152 44Ga0157309_100038583 45Ga0157309_100345751 46Ga0157309_101771042 47Ga0157309_102087822 48Ga0157303_100866412 49Ga0157303_101825651 50Ga0157303_102591761 51Ga0157299_101636772 52Ga0157292_100062991 53Ga0157292_100184982 54Ga0157288_100295431 55Ga0157288_102382132 56Ga0157288_103535332 57Ga0157288_104020081 58Ga0157291_102767082 59Ga0157283_104205162 60Ga0157290_104739291 61Ga0157308_100629501 62Ga0157301_102856061 63Ga0157298_102440232 64Ga0157298_102793951 65Ga0157307_11146121 66Ga0157307_11662951 67Ga0157370_108571732 68Ga0157380_126522171 69Ga0180062_10887901 70Ga0173483_101567681 71Ga0173483_107319322 72Ga0173480_104025132 73Ga0173480_104025133 74Ga0173478_102618081 75Ga0132255_1051382421 76Ga0163161_116781462 77Ga0190274_111030111 78Ga0190274_118511392 79Ga0247748_10521911 80Ga0247798_10406633 81Ga0247794_103478152 82Ga0207712_106050161 83Ga0207675_1026049242 84Ga0208454_11201612 85Ga0208454_11201613 86Ga0247750_10206341 87Ga0272412_11361561 88Ga0272412_13385042 89Ga0272412_13385043 90Ga0268298_101231724 91Ga0268298_101231725 92Ga0268298_102360131 93Ga0310888_110839692 94Ga0310888_110887352 95Ga0310900_115145551 96Ga0310900_118909392 97Ga0310884_103482021 98Ga0310884_103482022 99Ga0310884_105756461 100Ga0310884_105756462 101Ga0310896_102438281 102Ga0370495_0136815_90_326
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 12001272637 24MG_02675470 3YBBDRAFT_11772303 4Ga0062591_1026488661 5Ga0065712_103212103 6Ga0111538_125849981 7Ga0105097_108653982 8Ga0114942_11515492 9Ga0114942_13791081 10Ga0105237_117875111 11Ga0105340_13869342 12Ga0116249_108007661 13Ga0116249_117662851 14Ga0116249_117662852 15Ga0137326_10376721 16Ga0137326_11119931 17Ga0137428_12478971 18Ga0137431_11607641 19Ga0138256_1000619310 20Ga0136612_105250512 21Ga0157305_100980151 22Ga0157309_100345751 23Ga0157303_101825651 24Ga0157303_102591761 25Ga0157299_101636772 26Ga0157288_102382132 27Ga0157288_103535332 28Ga0157288_104020081 29Ga0157290_104739291 30Ga0157308_100629501 31Ga0157298_102440232 32Ga0157298_102793951 33Ga0157307_11146121 34Ga0180062_10887901 35Ga0173483_107319322 36Ga0173480_104025132 37Ga0163161_116781462 38Ga0190274_111030111 39Ga0190274_118511392 40Ga0272412_11361561 41Ga0272412_13385042 42Ga0272412_13385043 43Ga0310884_105756461 44Ga0310884_105756462 45Ga0370495_0136815_90_326
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1Ga0157281_10005033 22001272637 34MG_02675470 4YBBDRAFT_11772303 5Ga0062591_1026488661 6Ga0065712_103212103 7Ga0111538_116175831 8Ga0111538_118462671 9Ga0111538_125849981 10Ga0105097_108653982 11Ga0114942_11515492 12Ga0114942_13791081 13Ga0105237_117875111 14Ga0105238_128253312 15Ga0105249_120292041 16Ga0105252_101235052 17Ga0116249_108007661 18Ga0116249_117662851 19Ga0116249_117662852 20Ga0137326_11119932 21Ga0137462_10889971 22Ga0137423_12433021 23Ga0137428_12478971 24Ga0137431_11607641 25Ga0137449_10513681 26Ga0138256_1000619310 27Ga0136612_105250512 28Ga0157305_100980151 29Ga0157305_100980152 30Ga0157309_100345751 31Ga0157309_101771042 32Ga0157299_101636772 33Ga0157292_100062991 34Ga0157288_100295431 35Ga0157288_103535332 36Ga0157288_104020081 37Ga0157290_104739291 38Ga0157308_100629501 39Ga0157301_102856061 40Ga0157298_102440232 41Ga0157298_102793951 42Ga0157307_11146121 43Ga0157370_108571732 44Ga0157380_126522171 45Ga0180062_10887901 46Ga0173483_107319322 47Ga0173480_104025132 48Ga0173480_104025133 49Ga0190274_111030111 50Ga0190274_118511392 51Ga0247798_10406633 52Ga0207712_106050161 53Ga0207675_1026049242 54Ga0208454_11201613 55Ga0272412_11361561 56Ga0272412_13385042 57Ga0268298_101231724 58Ga0310888_110839692 59Ga0310888_110887352 60Ga0310900_115145551 61Ga0310900_118909392 62Ga0310884_103482021 63Ga0310884_105756462 64Ga0310896_102438281 65Ga0370495_0136815_90_326
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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.45% β-sheet: 0.00% Coil/Unstructured: 79.55%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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Pfam ID	Name	% Frequency in 93 Family Scaffolds
PF13573	SprB	1.08

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
No data available in table

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	10.78%
Environmental	Environmental	74.51%
Host-Associated	Host-Associated	14.71%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	23.53%
Plants	Host-Associated → Plants	14.71%
Solid Waste	Engineered → Solid Waste	0.98%
Terrestrial	Environmental → Terrestrial	50.98%
Wastewater	Engineered → Wastewater	9.80%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge	6.86%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	2.94%
Freshwater	Environmental → Aquatic → Freshwater	3.92%
Grass	Engineered → Solid Waste → Grass	0.98%
Marine	Environmental → Aquatic → Marine	0.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.78%
Sediment	Environmental → Aquatic → Sediment	18.63%
Soil	Environmental → Terrestrial → Soil	50.98%

Habitat	Taxonomy	Distribution
Composting	Engineered → Solid Waste → Grass → Composting	0.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.96%
Ice	Environmental → Aquatic → Freshwater → Ice	0.98%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	18.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.78%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	6.86%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.98%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.88%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	18.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.78%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	6.86%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.98%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	5.88%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.98%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	2.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.96%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	35.29%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	18.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.98%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.98%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2001200001	Soil microbial communities from Waseca County, Minnesota, USA - Sample 10150	Environmental	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300001372	YB-Back-sed	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M

Showing 1 to 10 of 66 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2001272637	2001200001	Soil	LVPEQVGSEPSTGPVIVNGSPHELFILGGVGTVCAFAIQATVEFPGAGMLKVGGEIVYV
4MG_02675470	2170459019	Switchgrass, Maize And Mischanthus Litter	VYVHVYVLFPEQTGSGPTTGPVIVAGVPQELFTDGGVGTVCAFEIQATVALPGAGAVIVGGEMV
YBBDRAFT_11772303	3300001372	Marine Estuarine	VYVLIPEHTGSVLTTGPVIVAGAPHELFTTGGVGTTCASLTHATVALPGAGADIVGGDMVYVYTHGLALPVQ
Ga0062591_1026488661	3300004643	Soil	VYVLVPEHAGLALTTGPVMVAGVPQELFTVGGVGTVSALIIQGTVELPGAGAVIVGAEIV
Ga0065712_103212103	3300005290	Miscanthus Rhizosphere	VYVLVPEQTGSGPTTGPVGVTGDPHALMTLGGVGTVCALLIQATVEPPLA
Ga0105243_104588462	3300009148	Miscanthus Rhizosphere	VYVFVPEQTGSGLTTGPVIVAGVPHELFTVGGVGTVCAFETQATVALPGAGAEIVGGVIVYVYTHGLELPVQSVYV*
Ga0111538_116175831	3300009156	Populus Rhizosphere	VYVLTPEQTGFGLTTGPVIVAGVPQELFTVGGVGTVCALLIQGTVALPGAGAEIVGGDIV
Ga0111538_118462671	3300009156	Populus Rhizosphere	VYVLVPEQTGSGLITGPVIVAGAPQELFTAGGVGTNCASLIQATVALPGAGVVIVGGDMV
Ga0111538_125849981	3300009156	Populus Rhizosphere	VYVFVPEHTGSVLTTGPEMVAGAPHELFTTGGVGTDCALLIQATVALPGAGVAIVGGVIV
Ga0105097_108653982	3300009169	Freshwater Sediment	VPEQIGSAPTTGPVMVKGSPHELLTNGGDGTTCASLIHATVELPAAGKVNVGGFIV*
Ga0114942_11515492	3300009527	Groundwater	GPEQAGFGLTTGPEIVNGVPHELLTAGGVGTTCASLIHATVDPPFAGRDAVGGLMVYV*
Ga0114942_13791081	3300009527	Groundwater	PEQTGFGPTTGPEIVSGVPHELFTTGGVGTVCALLMHATVEPPAAGNENVGGDIV*
Ga0105237_117875111	3300009545	Corn Rhizosphere	VYVFVPEQTGSGPTTGPVGVIGFPQESSTDGGVGTTCALTMQGTVELPGAGKINVG*
Ga0105238_128253312	3300009551	Corn Rhizosphere	VYVLVPEQTGSALTTGPVIVAGAPHELFTVGGVGTTCALTTQGTVELPGAGAVIVGGEIV
Ga0105249_108063721	3300009553	Switchgrass Rhizosphere	LFPEQTGSGPTTGPVIVAGVPQELFTLGGVGTVCAFEIQATVALPGAGAEMVGGEMV*
Ga0105249_120292041	3300009553	Switchgrass Rhizosphere	VYVFVPEQTGSGLTTGPVIVAGVPHELFTVGGVGTVCAFETQATVALPGAGAEIVGGVIVYVYTHGLE
Ga0105340_13869342	3300009610	Soil	YVLVPEQTGSGLMTGPVGITGLPQESLTLGGVGTVCALLIQGTVLPPGAGTFEVGGLIV*
Ga0105252_101235052	3300009678	Soil	VYVLTPEQTGLGLTTGPVIVAGVPQELLTTGGTGTVCALLIQATVALPGAGAEMVGGEMV
Ga0116249_108007661	3300010357	Anaerobic Digestor Sludge	QVYVLVPEQTGSGPTTGPEIVNGAPHELLTAGGVGVVCALLIQATVDPPAAGIVIVGGEMVYVYTHGAEVPVQSV*
Ga0116249_117662851	3300010357	Anaerobic Digestor Sludge	MPEQAGSALTTGPVMARGSPHELFTAGGVGTVWALLIQATVELPLAGNVAVGGLTV*
Ga0116249_117662852	3300010357	Anaerobic Digestor Sludge	PEVPVQSVYVQVYVFGPEHSGSAPTTGPVTVNGVPHELFTTGGVGITCASLIQATVDPPAAGRVKVGGVMVYVYTHWDVAPVQSV*
Ga0137326_10189332	3300011417	Soil	VYVLTPEQTGLGLTTGPVIVAGVPQELLTTGGTGTVCALLTHATVALPGAGAVMVGGEIV
Ga0137326_10376721	3300011417	Soil	LVPEQTGSGLTTGPVIVAGVPHELFTDGGVGTTCASLIQFTVALPAAGADIVGGVIV*
Ga0137326_11119931	3300011417	Soil	TGSGLITGPVTVVGAPQELFTVGGVGTVCALMIQATVALPGAGAEIVGGDIV*
Ga0137326_11119932	3300011417	Soil	VYVLVPEQTGSGLMTGPVGITGLPQESLTLGGVGTVCALLIQGTVLPPGAGTFEVGGLIV
Ga0137462_10889971	3300011421	Soil	VYVFTPEQTGSGLTTGPVMVAGVPQELFTVGGVGTVCALMIQGTVALPGAGAEMVGGEMV
Ga0137423_12433021	3300011430	Soil	LVPEQTGSGLTTGPVIVAGVPHELFTVGGVGTTCASLIQFTVALPAAGADIVGGVIV*
Ga0137428_12478971	3300011432	Soil	PEHTGSGLTTGPVIVAGAPQELFTVGGVGTVCAFAIHGTVELPGAGAVMVGGVMV*
Ga0137426_10928951	3300011435	Soil	LVPEQTGSGLTTGPVIVAGAPQELFTVGGVGTVCAFAIHGTVELPGAGAVMVGGV
Ga0137457_12286032	3300011443	Soil	VYVLTPEQTGLGLTAGPVMVAGVPQELLTTGGTGTVCALLIQATVALPGAGAEMVGGEMV
Ga0137431_11607641	3300012038	Soil	LVPEHAGFGLMTGPVTVAAVPQELLTVGGTGTVCALTIHGTVEPPGAGAVMVGGE
Ga0137421_10357151	3300012039	Soil	EHTGSGLTTGPVIVAGAPQELFTVGGVGTVCAFAIHGTVELPGAGAVMVGGVMV*
Ga0137350_10735591	3300012166	Soil	EQTGSGLMTGPVGITGLPQESLTLGGVGTVCALLIQGTVLPPGAGTFEVGGLIV*
Ga0137357_11162171	3300012168	Soil	PEQTGSGLTTGPVTVVGAPQELFTVGGVGTVCALMIQATVALPGAGAEIVGGDIV*
Ga0137449_10513681	3300012227	Soil	VYVFVPEHAGSGLTTGPVTVVGAPQELFTDGGVGTVCALLIHATVALPGAGTEIVGGDMV
Ga0138256_1000619310	3300012533	Active Sludge	VYVHVYVFVPEHTGSALTTGPVIVNGAPHELLTTGGVGTTCASLTHATVDPSSAGNVNVGGVMVYVYTH*
Ga0136612_105250512	3300012680	Polar Desert Sand	VYVQVYVLVPEQTGLEPTTGPLIVTGVPHELFTTGGVGITCASLIQPTVKLPFAGKLKVGGETV*
Ga0157304_10033201	3300012882	Soil	LVPEQTGSGLTTGPVIEAGVPQELSTVGGVGTTCASLTQETVALPGAGADTVGGDTV*
Ga0157304_10317302	3300012882	Soil	VYVFVPEQTGSGLTTGPVIVAGVPHELFTVGGVGTVCAFETQATVALPGAGAEIVGGVMVYVYTHGLELPVQSVYV*
Ga0157304_10574962	3300012882	Soil	LFPEQTGSGPTTGPVIVAGVPQELFTDGGVGTVCAFEIQATVALPGAGAVIVGGEMV*
Ga0157281_10005033	3300012883	Soil	VYVLVPEQTGSGLTTGPVIVVGAPQELFTVGGVGTVCALLIQATVALPGAGAEIVGGDTV
Ga0157305_100980151	3300012891	Soil	VFGPEQTGSAPTTGPVIVNGSPHELFTTGGVGTTCAFTIHATVEPLFAGIDAVGGVTVYVNTH*
Ga0157305_100980152	3300012891	Soil	VPEQTGSGLTTGPVIVNAVPHELFTTGGVGTTCASLTHATVAAPGAGNVKVGGVMV*
Ga0157309_100038583	3300012895	Soil	LVPEQTGSGLTTGPVIEAGVPQELSTVGGVGTTCASVTQETVALPGAGADTVGGDTV*
Ga0157309_100345751	3300012895	Soil	VYVLVPEQGGSGLTTGPVGVTGPPQALTTVGGVGTVCALLIQATVVPPGAGKVNVVGAIV
Ga0157309_101771042	3300012895	Soil	VQVYVFVPEQTGSGLTTGPVMVAGVPQELLTDGGVGTVCALLIQATVALPGAGAEIVGGEIVYV*
Ga0157309_102087822	3300012895	Soil	VYVLTPEQTGFGLTTGPVIVAGVPQELFTVGGVGTVCALLIQGRFALPGAGAEIVGGDIV
Ga0157303_100866412	3300012896	Soil	VYVFVPEQTGSGLTTGPVIVAGVPHELFTVGGVGTVCALETQATVALPGAGAEIVGGVMVYVYTHGLELPVQSV*
Ga0157303_101825651	3300012896	Soil	YVFVPEQTGFGPTTGPVIEAGVPQELLTTGGVGTVCALLIQATVALPGAGAEIVGGEIVYV*
Ga0157303_102591761	3300012896	Soil	TGPVGVIGLPQESFTFGGVGTVCAFEIQGTVLPPGAGMVAVGALIVYVNTY*
Ga0157299_101636772	3300012899	Soil	VPEHTGLGPTTGPVGVTGLPHESFTFGGVGTTCALTIQGTVDPPGPGSVNVGEGIV*
Ga0157292_100062991	3300012900	Soil	VYVQVYVLVPEQTGSGLTTGPVIEAGVPQELSTVGGVGTTCASLTQETVALPGAGADTVGGDTV*
Ga0157292_100184982	3300012900	Soil	VKVQVYVLVPEQTGSALITGPVIVAGAPQELFTVGGVGTSCASLIQATVALPGAGAEIVGGDTV*
Ga0157288_100295431	3300012901	Soil	VYVFTPEQTGSGLTTGPVMVAGVPQELFTTGGTGTVCALLTHATVALPGAGAVMVGGEIV
Ga0157288_102382132	3300012901	Soil	TGSGPTTGPVGVIGAPQESFTFGGVGTVCALLIQGTVLPPGAGMVAVGGLIV*
Ga0157288_103535332	3300012901	Soil	VYVFVPEQTGSGPTTGPVNESGSPHELSTEGGVGTTCAALIQATVEEPGAGNTNVGGAIVYVYTHDAFDPEQSK*
Ga0157288_104020081	3300012901	Soil	VGSAPSTGAEIASGAPQELFTAGGVGTTCASAIHGTVAEPGAGNVNVGGDTVYVYTPCQLVPVQSVNVQV*
Ga0157291_102767082	3300012902	Soil	GSGLTTGPVMVAGVPQELLTDGGVGTVCALLIQATVALPGAGAEIVGGEIVYV*
Ga0157283_104205162	3300012907	Soil	GPVGVIGLPQESLTFGGVGTVCALLIQGTVLPPGAGMVAVGALMV*
Ga0157290_104739291	3300012909	Soil	VPEQTGSGPTTGPTGVMVLPQLSITVGGVGTPCASAIQGTVELPGAGNVNDGVFIV*
Ga0157308_100629501	3300012910	Soil	PEHTGSGLTTGPVMEVGVPQELFTAGGTGTTCASAIQETVAPPGAGADTVGGDTV*
Ga0157301_102856061	3300012911	Soil	VYVFVPEHVGSGPTTGPVGVIGEPQESFTFGGVGTVCALLIQGTVLPPGAGMVAVGGLIV
Ga0157298_102440232	3300012913	Soil	VYVFVPEHTGSAPTTGPVIVSGVPQELFVGGGVGATCALLIQATVDPPAAGGVNVGGVIVYVYTHMADIIVTGSV*
Ga0157298_102793951	3300012913	Soil	LVPEHTGSGLTTGPVIEAGVPQELFTIGGVGTTCASLIQFTVALPAAGADMVGGVTVYVYTHCEAAPEQSV*
Ga0157307_11146121	3300013096	Soil	PEQTGSGPTTGPVGVTGLPQESLTLGGVGITWAFTIHGTVEPPGAGTFEVGGLMV*
Ga0157307_11662951	3300013096	Soil	LVPEQTGSGLTTGPVIEAGVPQELSTVGGVGTTCASLTQETVALPGAGADTVG
Ga0157370_108571732	3300013104	Corn Rhizosphere	VYVHVYVFVPEQTGSGLITGPVTVAGVPQELLTVGGTGTVCALLMQATVAAPGAGAEIVGGDIV*
Ga0157380_126522171	3300014326	Switchgrass Rhizosphere	LVPEQVGFGPTTGPVMVAGVPQELLTAGGVGTVCALLIQGTVVPPGAGAEIVGGEMV*
Ga0180062_10887901	3300014879	Soil	VPAQVGLGPTTGPVGVIVAPQEFITTGGVGTVCALIRQGTFDPPGAGTLNVGGLMV*
Ga0173483_101567681	3300015077	Soil	TGPVGVIGLPQESLTFGGVGTVCALLIQGTVLPPGAGMVAVGALMV*
Ga0173483_107319322	3300015077	Soil	VFVPEHAGSGPTTGPVGVIGLPQVSLTLGGVGVTCALTIQGTVLPVPGGTVEEGGLIL*
Ga0173480_104025132	3300015200	Soil	VYVLVPEQTGSGPITGPVGVIGLPHESFTLGGVGTVCAFEIQSTVLPPAGGTVDVGGLMVYVNTY*
Ga0173480_104025133	3300015200	Soil	VNVLFPEQTGSAPITGPVMDAGSPHELFTVGGVGTVCASAIQATVALPGAGAEIVGGEIV
Ga0173478_102618081	3300015201	Soil	VLVPEQTGSGLTTGPVIEAGVPQELSTVGGVGTTCASLTQETVALPGAGADTVGGDTV*
Ga0132255_1051382421	3300015374	Arabidopsis Rhizosphere	VYVFVPEQTGSGLTTGPVIVAGVPHELFTVGGVGTVCAFETQATVALPGAGAEIVGGVMV
Ga0163161_116781462	3300017792	Switchgrass Rhizosphere	VHVYVFVPEQTGSGLTTGPVIVAGVPHELFTVGGVGTVCAFETQATVALPGAGAEIVGGVIVYVYTHGLELPVQSVYV
Ga0190274_111030111	3300018476	Soil	NEFPAQSKYVHVYVFVPVHPGSGLTTGPVSVKGSPQLEFAEGGTGTTCASATHVTVDPSSGGNVNVGGDIVYV
Ga0190274_118511392	3300018476	Soil	VYVHVYVFVPEQTGSGPTTGPVGTIGLPHESLTFGGVGTVCASTTQGTVELPGAGSVNVGGVIV
Ga0247748_10521911	3300023168	Soil	VYVFVPEHVGSGPTTGPVGVIGAPQESFTFGGVGTVCALLIQGTVLPPGAGMVAVGGLIV
Ga0247798_10406633	3300023260	Soil	VPEQTGSAPTTGPVGVTGAPQALTTVGGVGTTCALLIQATVVPPFAGNVKVVGAMV
Ga0247794_103478152	3300024055	Soil	VYVLVPEQAGLALTTGPVMVAGVPQELFTVGGVGTVCALIIQGTVELPGAGAVIVGAEIV
Ga0207712_106050161	3300025961	Switchgrass Rhizosphere	VFPVQSVYVQVYVLFPEQTGSGLTTGPVMVAGAPQELFTVGGVGTVCAFTIQATVALPGAGAAIVGGVIVYV
Ga0207675_1026049242	3300026118	Switchgrass Rhizosphere	GPTTGPVGVIGLPQESFTFGGVGTVCAFEIQGTVLPPGGGIVAVGALIVYVNTY
Ga0208454_11201612	3300027573	Soil	VYVFTPEQTGSGLTTGPVMVAGVPQELLTTGGTGTVCALLTHATVALPGAGAVMVGGEIV
Ga0208454_11201613	3300027573	Soil	PEHTGSAPTTGPVGVIGVPQESFTLGGVGTVCALLIQGTVLPVPAGTVEEGGLIV
Ga0247750_10206341	3300027992	Soil	VYVFVPEQTGSGLTTGPVIVAGVPHELFTVGGVGTVCALETQATVALPGAGAEIVGGVMVYV
Ga0272412_11361561	3300028647	Activated Sludge	VPEQAGSAPTTGPVIVNGSPHELLTTGGVGTTCALLMHATVELPLAGRVAVGGVIVYVYTHGVVAPVQLVYVQV
Ga0272412_13385042	3300028647	Activated Sludge	VPEHIGSAPTTGPVIESAAPHELFTTGGVGTVCALLIQATVEPPAAGIVIVGGEMVYVYTHGADVPVQSVYVQV
Ga0272412_13385043	3300028647	Activated Sludge	VPEQTGSALTTGPVLVRAVPHELFTTGGVGTVCALMIHATVELPAAG
Ga0268298_101231724	3300028804	Activated Sludge	VPEQTGSALTTGPVLVSAVPHELLTTGGVGTVCALIIHATVELPAAGIVNVGGDIV
Ga0268298_101231725	3300028804	Activated Sludge	VPEQTGSALTTGPVLVSAVPHELLTTGGVGTVCALIIHATVELPAAGRVNVG
Ga0268298_102360131	3300028804	Activated Sludge	VQSVYVQVYVLVPEQTGSGPTTGPEIVNGAPHELLTAGGVGVVCALLIQATVDPPAAGIVIVGGEMV
Ga0310888_110839692	3300031538	Soil	SVYVHVYVLIPEQTGSGLTTGPVIVAGVPQELFTVGGVGTVCALLIQETVVPPGAGAVIVGGVIV
Ga0310888_110887352	3300031538	Soil	LGPTTGPVGVIGLPQESLTFGGVGTVCALLIHGTVRAPGAGAVIVGGEIV
Ga0310900_115145551	3300031908	Soil	VYVFVPEQTGFGPTTGPVIVAGAPHELFTVGGVGTVCALLMQATVALPGAGAVMVGGEIV
Ga0310900_118909392	3300031908	Soil	VYVLVPEQTGSAPTTGPVITAGSPQELFTVGGVGTTCASLIQATVALPGAGAVIVG
Ga0310884_103482021	3300031944	Soil	VYVHVYVFVPEQTGSGPTTGPVIDAGVPQELFTVGGVGTTCASLTQATVALPGAGADIDGGVTV
Ga0310884_103482022	3300031944	Soil	VYVFVPEQTGSGPTTGPVGTIGLPHESLTFGGVGTVCASTIHGTVELPGAGNENVGGVIV
Ga0310884_105756461	3300031944	Soil	VYVFVPEHTGSGPTTGPVIVVGALQELFTAGGTGTTCASLIHATVAPPGAGAVMVGGDIVYVYTHCALVFVQSVYVKVY
Ga0310884_105756462	3300031944	Soil	TAPTTGPVTDAGAPHELFTIGGVGTTCASLIHATVAFPGAGAVIVGGDIV
Ga0310896_102438281	3300032211	Soil	VYVFVPEHTGSGPTTGPVIVAGALQELFTAGGTGTTCASLIHATVAPPGAGAVMVGGDIVYVYTHCALVF
Ga0370495_0136815_90_326	3300034257	Untreated Peat Soil	VYVFVPEQTGSAPTTGPDIVSGAPHELFTAGGVGTTCASLRHGTVELPAAGIVNVGGVIVYVKIHCPVAPVQSVKVQV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102137

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences