NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F102119

Metagenome Family F102119

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F102119
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 116 residues
Representative Sequence MDILRNLFGSLTSGIIRLLVAVGILAAAYFFIVKPVLKTTDNAINSANESFEKSFGTHGTDLTDISGTIDDVNRRIQREIRRSFHTAEKNGNPKKLVRCIQRANGDVHRIQRCTVKF
Number of Associated Samples 81
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 17.82 %
% of genes near scaffold ends (potentially truncated) 18.63 %
% of genes from short scaffolds (< 2000 bps) 55.88 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (89.216 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(32.353 % of family members)
Environment Ontology (ENVO) Unclassified
(41.176 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(52.941 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144
1A5_v_00119700
2JGI12135J13285_1001176
3JGI20186J14852_10030692
4JGI24740J21852_100029816
5JGI25614J43888_101359292
6JGI25404J52841_100042653
7Ga0055470_100604362
8Ga0066809_100199002
9Ga0065707_104410462
10Ga0066388_1015818183
11Ga0066388_1029557552
12Ga0070682_1007211332
13Ga0070691_1000001037
14Ga0070667_1003597941
15Ga0070714_1021493061
16Ga0070702_1002609461
17Ga0068866_107809022
18Ga0068861_1003083682
19Ga0068863_1000308932
20Ga0068863_1000883804
21Ga0068858_1012329341
22Ga0068862_1017556112
23Ga0097621_1009135022
24Ga0105247_100005285
25Ga0105242_1000001033
26Ga0105242_100008259
27Ga0126313_108541332
28Ga0126313_113185832
29Ga0126306_103724441
30Ga0105239_121497261
31Ga0150985_1127057382
32Ga0150985_1171748012
33Ga0157292_1000001276
34Ga0157301_100184522
35Ga0164241_100015622
36Ga0164241_100264626
37Ga0164298_114240551
38Ga0164307_111351321
39Ga0164306_106287782
40Ga0164305_100229982
41Ga0157378_100977774
42Ga0157375_101027325
43Ga0075318_10542262
44Ga0167633_1072892
45Ga0167637_10159851
46Ga0132258_108715982
47Ga0132255_1030602942
48Ga0190265_106540042
49Ga0190272_1000128215
50Ga0190272_100938273
51Ga0190272_127196671
52Ga0190275_100602501
53Ga0190275_101835861
54Ga0190274_1000006733
55Ga0190274_102015322
56Ga0190274_107187192
57Ga0190271_100037374
58Ga0190271_100091482
59Ga0190271_104914852
60Ga0190264_100015462
61Ga0190264_107974082
62Ga0193743_10188392
63Ga0196977_11381952
64Ga0193706_100066513
65Ga0193706_10011642
66Ga0193706_10090033
67Ga0193694_10518271
68Ga0247746_10216592
69Ga0247780_10025704
70Ga0196962_100017208
71Ga0208356_100001060
72Ga0207929_10235162
73Ga0208078_10437331
74Ga0207692_107959372
75Ga0207642_109268681
76Ga0207710_1000013825
77Ga0207710_103743212
78Ga0207644_101102562
79Ga0207686_1000010730
80Ga0207686_100013485
81Ga0207712_109355311
82Ga0208420_10193302
83Ga0207641_100323174
84Ga0207641_101100903
85Ga0207675_1001225893
86Ga0207675_1023867621
87Ga0209240_10207124
88Ga0209113_10602072
89Ga0208998_10000272
90Ga0209624_100123873
91Ga0268264_104702181
92Ga0265326_100924512
93Ga0265318_103160202
94Ga0307322_102413401
95Ga0307283_100312262
96Ga0307503_10000006267
97Ga0307289_100302802
98Ga0307476_1000034133
99Ga0315910_100000031002
100Ga0315912_101388022
101Ga0335070_1000009528
102Ga0335070_105621552
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 67.59%    β-sheet: 0.00%    Coil/Unstructured: 32.41%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110MDILRNLFGSLTSGIIRLLVAVGILAAAYFFIVKPVLKTTDNAINSANESFEKSFGTHGTDLTDISGTIDDVNRRIQREIRRSFHTAEKNGNPKKLVRCIQRANGDVHRIQRCTVKFExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
89.2%10.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Natural And Restored Wetlands
Soil
Soil
Serpentine Soil
Glacier Forefield Soil
Switchgrass Rhizosphere
Soil
Arctic Peat Soil
Soil
Grasslands Soil
Hardwood Forest Soil
Soil
Natural And Restored Wetlands
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Agricultural Soil
Soil
Plant Litter
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
32.4%2.9%3.9%3.9%2.9%9.8%3.9%3.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A5_v_001197002124908036SoilMDILRNIVGSLTSGVIRLAVTVGILAAVYFFIVKPVLHSTEKAVDGANKSLETSLGGSGLDDIGKTLEGVDKQVERQIRRSFHTAKKNGNPKKLVRCIEHARGNVHRIQRCTVKF
JGI12135J13285_10011763300001161Forest SoilMDILRNIFGTLTSGVIRLLVSVGILAAAYFFIVKPVLHTTDNAIKNANKSFEKSFGTHGTDLTDISGTIEDVNRQVERQIRHSFHAAKKEGSPKRLVRCIQRSHGDVQKIQRCTVKF*
JGI20186J14852_100306923300001405Arctic Peat SoilMDILRNLFGSLTSGVIRLLVSVGILAAAYFFIVKPVLHTTDNAINSANKTFEKSFGNSGLNDIGHTLQNVNREVRRQVTHSFHVTKIHGTNPKKLIRCVQRAEGDVHKIQRCAVKF*
JGI24740J21852_1000298163300001979Corn RhizosphereMDILRNLFGALTSGIIRLLVAVGVLAAAYFFIVKPVLHTADKGIESANKSLESSFGSKSLDSVSHAIDDVSQQVQRQVRRSLHVAQKNGNPKRLVKCVEHADGDARKIRRCTVKF*
JGI25614J43888_1013592923300002906Grasslands SoilVDILRNLFGTLTSGIIRLIVAVGILAAAYFFIVKPVLKTTSDAIKTTNSSLEKSFGGAGLNDIGKTFENVDREVQRQIRRSFHTAKRNGNPKRLVRCIQHAHGDVHRIQRCTVKF*
JGI25404J52841_1000426533300003659Tabebuia Heterophylla RhizosphereMDLLRNLFGNLTSGIIRLLVAVGIIAAAYFFLLKPVLKTTSDTFKEVNKSFGKTFHTKGVDVTDISGTIEEVNREMRREIRRSLHAAKVHGNPKKLVKCIERAEGNVHRIQRCTVKF*
Ga0055470_1006043623300003992Natural And Restored WetlandsMDILRNLFGSLTSGVIRLLVTVGILAAVYFFIVKPVLHTTDNAINSANKTLEKSFGTQGTDITDISGTIEDVNRRVQREIRRSFHTAKKEGDPKRLVRCIQRAHGNVQRIQRCTVKF*
Ga0066809_1001990023300005168SoilMDILRNLFGSLTSGVIRLLVTVGILAAAYFFIVKPVLKTTDNAIDSANQSFEKSFGVHGADITDITDISGTIEDVNRKIRREIKRSFHVAEKEGNPKRLVRCIKRSN
Ga0065707_1044104623300005295Switchgrass RhizosphereMDILRNLFGNLTSGIIRLLVTVGILAAAYFFIVKPVLKSTDNAINRGFDSAKEANESFEKSFGPDGANLGDINKTIDSVNHQVQVQIERSFHTAKKHGNPNKLVRCVQHAEGNVQKIKRCTVKF*
Ga0066388_10158181833300005332Tropical Forest SoilMDLLRNLFGNLTSGIIRLLVAVGILAAAYFFLLKPVLKTTSDTFKEVNKSFNKTFHTKGVDVTDISGTIEKVNKEIQREIKRSLRAAEKNGNPKKLVKCIQRAEGNVHKIQRCTVKF*
Ga0066388_10295575523300005332Tropical Forest SoilMDFLRNLFGNLTTGVIRVAVAAGILGAAYLFIVKPVMDTTNNAIDSANKTFEKSFGTGLDMNDIDKTIENVNHQVQIQVKRSFHVAKKEGTPMKLVHCIQRAHGDVQRIQHCTTRY*
Ga0070682_10072113323300005337Corn RhizosphereMDILRNLFGSLSSGIIRLLVTVGILAAAYFFIVKPVLKTTDKAIDSANQSFERTFHVKGVDVTDISGTIESVNVQVQRQIRHSFHVAKKEGNPKRLVKCIQRSHGNVQKIERCTVKF*
Ga0070691_10000010373300005341Corn, Switchgrass And Miscanthus RhizosphereMDILRNLFGSLTSGIIRLLVAVGILAAAYFFIVKPVLKTTDNAINSANESFEKSFGTHGTDLTDISGTIDDVNRRIQREIRRSFHTAEKNGNPKKLVRCIQRANGDVHRIQRCTVKF*
Ga0070667_10035979413300005367Switchgrass RhizosphereGILAAAYFFIVKPVLSTTEKAIDGANKSFERSFGVKGADITDISGTIEDVNIRIQRQIRRSFHVAKKEGNPKRLVKCIQRSHGNVQKIERCTVKF*
Ga0070714_10214930613300005435Agricultural SoilMDILRNLFGSLTSGVIRLLVSVGILAAAYFFIVKPVLKTTSDAIKTTNQSFEKSFGDNGLGSLQKTFEDVNRQVEREIKRSFHVAKQDGNPKRLVKCIQRARGDVHRIQRCTVKF*
Ga0070702_10026094613300005615Corn, Switchgrass And Miscanthus RhizosphereSFATCRRIVCGRRMDILRNLFGNVTSGLIRLLVTVGILAAAYFFIVKPVLNTTEKAIDGANKSFEQSFGTKGVDITDISGTIEDVNRQVQREIRRSFHTAERKGNPKHLVRCIERSRGNVKRIERCTLRF*
Ga0068866_1078090223300005718Miscanthus RhizosphereMDILRNLFGSLTSGIIRLLVTVGILAAAYFFIVKPVLKTTDKAIDGVNQSFEQSFGENGLGGLQKTFDDVNRQVEREIKRSFHTAERDGNPRRLVKCVQHAHGDVHRIQRCTVKF*
Ga0068861_10030836823300005719Switchgrass RhizosphereMDILRNLFGSLTSGIIRLLVAVGILAAAYFFIVKPVLKTTDKAIDSANQNFEKTFHVKGVDVTDISATIDDVNRQMQREIRRSFHVAKKEGNPKRLVKCIQRSHGDVQKIERCTVKF*
Ga0068863_10003089323300005841Switchgrass RhizosphereMDILRNLFGSLTSGVIRLLVAVGILAAAYFFIVKPVLKTTDNAINSANQSFEKSFGVHGVDITDISGTIDDVNRKVQREIRRSFHTAKKEGNPKRLVRCIKRSHGDVQKIQHCTVKF*
Ga0068863_10008838043300005841Switchgrass RhizosphereMDILRNLFGNLTSGIIRLLVTVGILAAAYFFIVKPVLKSTDNAINRGFDSAKEANESFEKSFGPNGADLGDINKTIDSVNHQVQVQIERSFHTAKKHGNPNKLVRCVQHAEGNVQKIKRCTVKF*
Ga0068858_10123293413300005842Switchgrass RhizosphereLRNLFGNLTSGIIRLLVTVGILAAAYFFIVKPVLKSTDNAINRGFDSAKEANESFEKSFGPNGADLGDINKTIDSVNHQVQVQIERSFHTAKKHGNPNKLVRCVQHAEGNVQKIKRCTVKF*
Ga0068862_10175561123300005844Switchgrass RhizosphereTLTSGVVRLLVTVGILAAVYFFIVKPVLKTTSEAIKTTNDSFQKSFGENGLGGLQTTFDDVNRQIEREIKRSFHVAKKDGNPKRLVRCVQRAHGDVHRIQRCTVKF*
Ga0097621_10091350223300006237Miscanthus RhizosphereMDILRNLFGSLTSGIIRLLVTVGILAAAYFFIVKPVLSTTEKAIDGANKSIESSFGIKGADITDISGTLDDVNRRVERQIRRSFHVAKQEGNPKRLVKCIQRSHGDVQKIERCTVKF*
Ga0105247_1000052853300009101Switchgrass RhizosphereMDILRNLFGSLTSGIIRLLVTVGILAAAYFFLVKPVLNTTNHAIDSANKTFEKSFGGSGIDELSKTFDDVNRQVQRQIRRSFHVAQKNGNPKRLIKCIEHADGDARKIRRCTVKF*
Ga0105242_10000010333300009176Miscanthus RhizosphereMDILRNLFGSLTSGVIRLLVAVGILAAAYFFIVKPVLKTTDNAIDSANKTFERSFGTHGTDLTDISKTIDQVNHKVQIEIRRSFHTAKKEGNPKRLVRCIERSHGDVQKIQHCTVKF*
Ga0105242_1000082593300009176Miscanthus RhizosphereMDILRNLFGSLTSGIIRLLVTVGILAAAYFLLVKPVLKTTDHAIDSANKTFEKSFGGSGLNDVTKDIDNVSSQIQRQVRRSLHLAEKKGNPKRLVKCIEHADGDARKIRRCAVKF*
Ga0126313_1085413323300009840Serpentine SoilMDILRNLFGSLTSGVIRLLVAVGILAAAYFFIVKPVLKTTDKAIDNANKTFEKSFGTHATDLTDISGTIEDVNRQVRRQIRRSFHSAKKEGNPKRLVRCIERSHGDVQKIQRCTVKF*
Ga0126313_1131858323300009840Serpentine SoilMDILRNLFGSLTSGLIRLLVTVGILAAAYFFIVKPVLKTTDNAIDNANKTFEKSFGTHNTDLTDISGTIDQVNRKVRIEIRKSFHVAKKEGNPKRLVKCIQRSHGDVQKIQRCTVKF*
Ga0126306_1037244413300010166Serpentine SoilMDILRNLFGSVTSGIVRLLVTVGILAAAYFFIVKPVLSTTEKAIDGANKSFEKSFGVKGADITDISGTIEDVNRRVEREIRRSFHAAEKEGKPKRLVKCIQRSHGDVDRIKRCTVKF*
Ga0105239_1214972613300010375Corn RhizosphereGRHMDILRNLFGSLTSGVIRLLVSVGILAAAYFFIVKPVLHTTDNAINSANKTFEKSFGGNNGLNDIGHTLENVNREVQVQIRHSFHTAKRDGNPKHLIRCIKHANGDVHRIQRCTVKF*
Ga0150985_11270573823300012212Avena Fatua RhizosphereILRNLFGSLTSGIIRLLVTVGVLAAAYFFIVKPVLKTTDNAINSANESFEKSFGTHGTDLTDISGTIEDVNRRVRREIRRSFHTAEKNGNPKKLVRCIERAHGDVHRIQRCTVKF*
Ga0150985_11717480123300012212Avena Fatua RhizosphereMDILRNLFGSLTSGIIRLLVTVGILAAAYFFLVKPVLKTTDHAIDSANKTFEKSFSGSGIDELSKTFGDVNRQVERQIRRSFHVAQKNGNPKRLIKCIEHADGDARKIRRCTVKF*
Ga0157292_10000012763300012900SoilMDILRNLFGSLTSGIIRLLVTVGILAAAYFFLVKPVLETTSEISKEANSNFQKSIGGEVDLSDIGATIESVNKQVQTQIRHSFHAAKKQGHPKQLVHCIEHAQGNVQRIRRCTVKF*
Ga0157301_1001845223300012911SoilMDILRNLFGNLTSGLIRLLVTVGILAAVYFFIVKPVLKTTGDAIKTTNQSFEKSFGVKGADITDISKTIEDVNKRVQREIRRSFHTAEKKGNPKRLVRCIERSNGDVHRIKRCTVKF*
Ga0164241_1000156223300012943SoilMDILRNLFGSLTSGIIRLLVTVGILAAAYFFIVKPVLKTTDNAIESANQSFEKSFGVHGTDLTDISGTIEDVNRKIRHDIRRSFHAAEKAGNPKRLVKCIQRAQGDVHRIQRCTVKF*
Ga0164241_1002646263300012943SoilMDILRNLFGSLTSGVIRLLVSVGILAAAYFFIVKPVLKTTSDAIKTTNQSFEKSFGDNGLGDLQKTFEDVNRQVEREIKRSFHVAKQDGNPKRLVKCIQRARGDVHRIQRCTVKF*
Ga0164298_1142405513300012955SoilMDILRNLFGSLSSGIIRLLVTVGILAAAYFFIVKPVLNTTDNAIDSANQSFEKSFGVHGADITDVSGTIEDVNRKIQREIRRSFHVAQKEGNPKRLVKCIQRAHG
Ga0164307_1113513213300012987SoilMDILRNLFGSLTSGIIRLLVAVGILAAAYFFIVKPVLKTTDNAIDSANHSFEKSFGVHGVDITDISGTIEDVNRQMQRQIRRSFHTAKKEGDPKRLVKCIKRSNGNVQRIQRCTVKF*
Ga0164306_1062877823300012988SoilMEVLRNLLGNATAGIIRLLVTVGILAAVYFFIVKPVLHTTDNAIDSANQSFEKSFGVHGVDITDISGTIEDVNRKVEREIRHSFHVAKKEGNPKRLVKCIQRSHGDVQKIQRCTVKF*
Ga0164305_1002299823300012989SoilMDILRNLFGNLTSGLIRLLVTVGILAAAYFFIVKPVLKTTGDAIKTTNQSFERSFGVQGVDITDISKTIEDVNKRVEREIRRSFHTAEKKGNPKRLVKCIERSNGNVNRIKRCTRKF*
Ga0157378_1009777743300013297Miscanthus RhizosphereMDILRNLFGSLTSGIIRLLVTVGILAAAYFFLVKPVLNTTDHAIDSANKTFEKSFGGSGIDELSKTFDDVNRQVQRQIRRSFHVAQKNGNPKRLIKCIEHADGDARKIRRCTVKF*
Ga0157375_1010273253300013308Miscanthus RhizosphereMDILRNLFGSLTSGVIRLLVAVGILAAAYFFIVKPVLKTTDHALDNANKTFEKSFGTHGTDLTDVGKTIDQVNHQVQIQIRRSFHTAKKEGSPDRLIRCIKRSHGDVQRIQRCTVKF*
Ga0075318_105422623300014256Natural And Restored WetlandsMEILRNLFGALTSGIIRLLVAVGILAAAYFFLIKPVLHTANHAIDSANKSLESSLGTEVDLGDIGGTLEKVDKRVERQIRAAFHTAKHNGNPEKLVRCIQRAEGNVHRIHRCTVKY*
Ga0167633_10728923300015069Glacier Forefield SoilMDILRNLFGSLTSGIIRLAVTVGILAAAYFFIVKPVLKTTSDTFKEANKSFEKSFGPTGAGLDDINKTINSVNHQVQVQIERSFHTAKKHGNPKKLVLCVQHAEGNVNKIKRCTVKF*
Ga0167637_101598513300015087Glacier Forefield SoilMDILRNLFGSLTSGVIRLLVSVGILAAAYFFIVKPVLHTTDNAINSANKTFEKSFGNNGLNDIGHTLQNVNREVRRQVTHSFHVTKIHGTNPKKLIRCVQRAEGDVHKIQRCAVKF*
Ga0132258_1087159823300015371Arabidopsis RhizosphereMDLLRNLFGSLTSGIIRLLVTVGILAAAYFFIVKPVLKTTDNAIDSANKSFEKSFGTHDTDITDISKTIDQVNRRVQREIRHSFHTATKEGDPRRLVKCIQRAHGDVARIKRCTVKF*
Ga0132255_10306029423300015374Arabidopsis RhizosphereMDILRNLFGNVTSGLIRLAVTAGILALAYLFIVKPVLKTTDNAIDSANKSFEKSFGTHDTDITDISKTIDQVNRRVQREIRHSFHTATKEGDPRRLVKCIQRAHGDVARIKRCTVKF*
Ga0190265_1065400423300018422SoilMDILRNLFGSLTSGIIRLLVTVGILAAAYFFIVKPVLKTTDKAIDGANQSFEKSFGIKGADITDISKTIEDVNRQVKREIKRSFHVAEKEGNPKRLVKCIKRSHGNVQKIQRCTVKF
Ga0190272_10001282153300018429SoilMEILRNLFGSFTSGVIRLLVTVGILAAAYFFIVKPVLSTTDKAIDSANQTFERSFGEGGLGELDEIGKTIENVNKQVQIEIRKSFDSAERNGNPKKLVRCIKRANGNVHRIQRCTAKY
Ga0190272_1009382733300018429SoilMLRNLFGNLTSGLIRLLVAVGILAAAYFFIVKPVLNTTEGGIEGANKSFEQSFGTKGVDITDISGTIEDVNRQVQREIRRSFKTAEKKGNPKRLVRCIERSDGNVKKIERCTRKF
Ga0190272_1271966713300018429SoilAAVAMDILRNLFGSVTSGIVRLLVTVGILAAAYFFIVKPVLSTTDKAIENANKSFERSFGVPGADITDVSGTIEQVNRRVEREIRRSFHTAEKEGNPKRLVKCIQRSHGDVDRIKRCTVK
Ga0190275_1006025013300018432SoilMDILRNLFGTLTSGIVRLLVAVGILAAAYFFIVKPVLKTTEEAIKTTNSSFEKSLGGSGIGDIGKTIEDVNRRVQREIRRSFRTAERNGNPKRLVRCIERAHGNVHRIERCTVKF
Ga0190275_1018358613300018432SoilMDILRNLFGTLTSGIVRLLVGVGILAAAYFFIVKPVLKTTEEAIRTTNSSFEKSLGGNGLGDIGKTIEDVNRRVQREVRRSFRTAERNGNPKRLVRCIERAHGDVHRIEKCTVKF
Ga0190274_10000067333300018476SoilMDILRNLFGNLTSGLIRLLVTVGILAAAYFFIVKPVLNTTDKAIEGANKSFERSFGVKGADITDVSGTIEDVNRQVQREIRRSFRTAEKKGNPKRLVRCIERSHGNVKRIERCTRKF
Ga0190274_1020153223300018476SoilMDILRNLFGTLTSGIVRLIVGVGILAAAYFFIVKPVLHTTDEAIKNANKSIEKSFGTQGTDLTDISGTIEDVNRRVQREIRRSFHTAKRDGNPKKLVRCIERARGDVHRIQRCTVKF
Ga0190274_1071871923300018476SoilMDILRNIFGTLTSGVIRLLVSVGILAAAYFFIVKPVLHTTDNAIKSANESFEKSFGENGLGGLRTTFEDVNRQVERQIKRSFHVAKKDGNPKRLVKCVQRAHGDVHRIQRCTVKF
Ga0190271_1000373743300018481SoilMDILRNLFGTVTSGIVRLLVGVGILAAAYFFIVKPVLKTTEEAIKTTNSSFEKSLGGNGLGDIGKTIEDVNRQVQREIRRSFHSAERNGNPKRLVRCIERAHGDVHRIEKCTVKF
Ga0190271_1000914823300018481SoilMDILRNLFGSLTSGIIRLLVTVGILAAAYFFLVKPVLSTTDKAIEQANKSFEKSFGGTGIGGLNDLPAAIDDVNKQIQREVRRSLHLAEKEGNPKRLVKCIEHSAGDARKIRRCTVKF
Ga0190271_1049148523300018481SoilVDILRNIFGTLTSGVIRLLVSVGILAAVYFFIVKPVLKTTGDAIKTTNDSFQKSFGENGFADLRKTFDDVDRQVQREIRRSFHTAKKDGNPKRLVKCIERARGDVHRIQRCTVKF
Ga0190264_1000154623300019377SoilMDILRNLFGSLTSGIIRLLVTVGILAAAYFFIVKPVLNTTDKAIDGANRSFEKSFGVQGVDITDIGGTINDVNRRVEREIRRSFHVAEKEGNPKRLVKCIQRSNGNVQRIQRCTVKF
Ga0190264_1079740823300019377SoilMDILRNLFGSLTSGIIRLLVTVGILAAAYFFIVKPVLKTTDKAIDGANQSFEKSFGIKGADITDISKTIEDVNRKMKREIKRSFHVAEKEGNPKRLVKCIKRSNGNVQRIERCTVKF
Ga0193743_101883923300019889SoilMDILRNLFGTVTSGIVRLIVAVGILGAAYFFILKPVLHTVDETSKQFNQGLGRSLRDSGLGDISKTIGDVNKQVQIEIRRSFHSAKQEGNPKRLVRCIKRSHGDVQRIQRCTVKF
Ga0196977_113819523300020146SoilLFGNLTSGLIRLLVAVGILAAAYFFIVKPVLDTTEGAIEGANKSLERSFGTKGVDITDISGTIEDVNRQVERQIKRSFKTAEKKGNPKRLVRCIERSRGDVKKIERCTRKF
Ga0193706_1000665133300021339SoilMDILRNLFGTLTSGIVRLIVGVGILAAAYFFIVKPVLHSADEAIKNTNSSFEKSFGGTGLGDIGKTIEDVNKRVEREIRRSFHAAEKNGDPKRLVRCIERAHGNVHHIQRCTVKF
Ga0193706_100116423300021339SoilVDILRNLFGTVTSGIVRLIVAVGILAAAYFFILKPVLHTVDTTSQQFNHSFEKSFGENGLGDLGKAFDDVNKRVQIEIRRSFHTAKREGNPKRLVRCIKHSHGDVQRIQRCTVKF
Ga0193706_100900333300021339SoilMDILRNLFGNLTSGIIRLAVTVGILAAAYFFIVKPVLQTTDNAIDKANRSFERSFGEKGLHDVTKTLEDVNHQVKIQIQRSFHTAENGGNPKRLIRCIKRAHGDVPKIQRCTVKF
Ga0193694_105182713300021415SoilMEILRNIFGTLTSGVVRLIVSVAVLAAAYFFIVKPVLNTTDHAIDSANESFEKSFGGNGFDDIGKAIEDANKQVQRQVQRSFHTAKKNGDPQ
Ga0247746_102165923300022886SoilDFLRNLFGNLTSGIIRLLVTVGILAAAYFFIVKPVLSTTEEAIKTTNQSFEKSFGVKGADVTDVSKTIDDVNRRIQREVRRSFHTAERKGDPNKLVRCIRRAHGDVHRIQRCAAKY
Ga0247780_100257043300023265Plant LitterMDFLRNLFGNLTSGIIRLLVTVGILAAAYFFIVKPVLSTTEEAIKTTNQSFEKSFGVKGADVTDVSKTIDDVNRRIQREVRRSFHTAERKGDPNKLVRCIRRAHGDVHRIQRCAAKY
Ga0196962_1000172083300024430SoilMDILRNLFGNLTSGLIRLLVAVGILAAAYFFIVKPVLDTTEGAIEGANKSLERSFGTKGVDITDISGTIEDVNRQVERQIKRSFKTAEKKGNPKRLVRCIERSRGDVKKIERCTRKF
Ga0208356_1000010603300025504Arctic Peat SoilMDILRNLFGSLTSGVIRLLVSVGILAAAYFFIVKPVLHTTDNAINSANKTFEKSFGNSGLNDIGHTLQNVNREVRRQVTHSFHVTKIHGTNPKKLIRCVQRAEGDVHKIQRCAVKF
Ga0207929_102351623300025505Arctic Peat SoilMEILRNIFGVFTSGVVRLLVSVGVLAAAYFFIVKPVLHTTDNAINSANKTFEKSFGGKGGIGEIGKTFESVDREVQRQIRHSFHTAKTNGNPHKLVRCIQHAHGDVNRIQRCTVKF
Ga0208078_104373313300025544Arctic Peat SoilMEILRNIFGVFTSGIVRLLVAVGILAAAYFFIVKPVLHTTDNAINSANKTFEKSFGGKGGIGEIGKTFESVDREVQRQIRHSFHTAKTNGNPHRLVRCIQRAHGDVHRIQRCTVKF
Ga0207692_1079593723300025898Corn, Switchgrass And Miscanthus RhizosphereTARRIVCDRRMELLRNLFGALTSGVIRLIVAVGILAAAYFFIVKPVLHTTEKGIDSANQSLEKSLGTEINLGDIGKTIEDVNRRVQREIRRSFHSAKRHGNPKRLVSCIERTNGNVHRIRHCTAKF
Ga0207642_1092686813300025899Miscanthus RhizosphereMDILRNLFGSLTSGIIRLLVTVGILAAAYFFIVKPVLKTTDKAIDGVNQSFEQSFGENGLGGLQKTFDDVNRQVEREIKRSFHTAERDGNPRRLVKCVQHAHGDVHRIQRCTVKF
Ga0207710_10000138253300025900Switchgrass RhizosphereMDILRNLFGSLTSGIIRLLVTVGILAAAYFFLVKPVLNTTNHAIDSANKTFEKSFGGSGIDELSKTFDDVNRQVQRQIRRSFHVAQKNGNPKRLIKCIEHADGDARKIRRCTVKF
Ga0207710_1037432123300025900Switchgrass RhizosphereMDILRNLFGNLTSGIIRLLVTVGILAAAYFFIVKPVLKSTDNAINRGFDSAKEANESFEKSFGPDGANLGDINKTIDSVNHQVQVQIERSFHTAKKHGNPNKLVRCVQHAEGNVQKIKRCTVKF
Ga0207644_1011025623300025931Switchgrass RhizosphereMDILRNLFGNLTSGIIRLLVTVGILAAAYFFIVKPVLKTTDNAINKTNESFEKSFGPDGANLGDINKTIESVNHQVQIQIQRSFHTAKKHGNPNKLIRCVEHANGNVNRIKRCTVKY
Ga0207686_10000107303300025934Miscanthus RhizosphereMDILRNLFGSLTSGVIRLLVAVGILAAAYFFIVKPVLKTTDNAIDSANKTFERSFGTHGTDLTDISKTIDQVNHKVQIEIRRSFHTAKKEGNPKRLVRCIERSHGDVQKIQHCTVKF
Ga0207686_1000134853300025934Miscanthus RhizosphereMDILRNLFGSLTSGIIRLLVTVGILAAAYFLLVKPVLKTTDHAIDSANKTFEKSFGGSGLNDVTKDIDNVSSQIQRQVRRSLHLAEKKGNPKRLVKCIEHADGDARKIRRCAVKF
Ga0207712_1093553113300025961Switchgrass RhizosphereFGNLTSGIIRLLVTVGILAAAYFFIVKPVLKSTDNAINRGFDSAKEANESFEKSFGPDGANLGDINKTIDSVNHQVQVQIERSFHTAKKHGNPNKLVRCVQHAEGNVQKIKRCTVKF
Ga0208420_101933023300026028Natural And Restored WetlandsSVTSGIIRLLVTVGILAAAYLFIVKPVLNTTEKAIDGANQSFERSFGTKGVDITDISGMIGDVNRQVQREIRRSFRTAEKKGNPKRLVRCIERSHGNVKRIERCTRKF
Ga0207641_1003231743300026088Switchgrass RhizosphereMDILRNLFGSLTSGVIRLLVAVGILAAAYFFIVKPVLKTTDNAINSANQSFEKSFGVHGVDITDISGTIDDVNRKVQREIRRSFHTAKKEGNPKRLVRCIKRSHGDVQKIQHCTVKF
Ga0207641_1011009033300026088Switchgrass RhizosphereMDILRNLFGILTSGIIRLLVTVGILAAAYFFIVKPVLKSTDNAINRGFDSAKEANESFEKSFGPNGADLGDINKTIDSVNHQVQVQIERSFHTAKKHGNPNKLVRCVQHAEGNVQKIKRCTVKF
Ga0207675_10012258933300026118Switchgrass RhizosphereMDLLRNLFGNLTSGIIRLLVAVGILAAAYFFLLKPVLKTTSDTFKEVNKSFNKTFHTKGVDVTDISGTIEEVNKEIQREIKRSLRAAKKNGNPKKLVKCIERAEGNVHKIQRCTVKF
Ga0207675_10238676213300026118Switchgrass RhizosphereMDILRNLFGSLTSGIIRLLVAVGILAAAYFFIVKPVLKTTDKAIDSANQNFEKTFHVKGVDVTDISATIDDVNRQMQREIRRSFHVAKKEGNPKRLVKCIQRSHGDVQKIER
Ga0209240_102071243300026304Grasslands SoilVDILRNLFGTLTSGIIRLIVAVGILAAAYFFIVKPVLKTTSDAIKTTNSSLEKSFGGAGLNDIGKTFENVDREVQRQIRRSFHTAKRNGNPKRLVRCIQHAHGDVHRIQRCTVKF
Ga0209113_106020723300027517Forest SoilMDILRNLFGSLTSGIIRLLVTVGILAAAYFFLVKPVLKTTDHAIDSANKTFEKSFGGSGLDGVTKDIDNVSRQVQRQVRRSLHLAEKNGSPKRLVKCIEHADGDARKIRRCTVKF
Ga0208998_100002723300027524Forest SoilMDILRNIFGTLTSGVIRLLVSVGILAAAYFFIVKPVLHTTDNAIKNANKSFEKSFGTHGTDLTDISGTIEDVNRQVERQIRHSFHAAKKEGSPKRLVRCIQRSHGDVQKIQRCTVKF
Ga0209624_1001238733300027895Forest SoilMDILRNLFGTLTSGVIRLLVSVGILAAAYFFIVKPVLHTTDNAINSANKTFERSFGKNGLGEIQKTFDDVDRQVQIQIQRSFHVAKHEGNPKRLVRCIKRSHGNVQKIQHCTVKF
Ga0268264_1047021813300028381Switchgrass RhizosphereMDILRNLFGNLTSGIIRLLVTVGILAAAYFFIVKPVLKSTDNAINRGFDSAKEANESFEKSFGPNGADLGDINKTIDSVNHQVQVQIERSFHTAKKHGNPNKLVRCVQHAEGNVQKIKRC
Ga0265326_1009245123300028558RhizosphereMEILRNLFGNLSSGIIRLLVSVGVLAAAYFFIVKPVLHTTDNAINSANKTFEKSFGPNGLDSISKTINGVDHQVQVQIERSFHTAKSHGNPQRLVHCIQHAHGDVQRIRRCTVKF
Ga0265318_1031602023300028577RhizosphereAADAMEILRNLFGNLSSGIIRLLVSVGVLAAAYFFIVKPVLHTTDNAINSANKTFEKSFGPNGLDSISKTINGVDHQVQVQIERSFHTAKSHGNPQRLVHCIQHAHGDVQRIRRCTVKF
Ga0307322_1024134013300028710SoilMDILRNLFGTVTSGIVRLLVTVGILAAAYFFIVKPVLSTTDKAFDTANKSLEKSFGGNGLGDIGKTIEDVNKRVERQIRRSFHTAKKDGNPKKLVRCIERAHGDVHRIQRCTVKF
Ga0307283_1003122623300028790SoilMDILRNLFGSLTSGVIRLLVAVGILAAAYFFIVKPVLKTTDNAIDSANQSFEKSFGVHGVDITDISGTIEDVNRQMQREIRRSFHTAKKEGNPKRL
Ga0307503_100000062673300028802SoilMDILRNLFGSLTSGIIRLLVTVGILAAAYFFLVKPVLETTSDISKEANSSFQKSIGGELDLSDIGGTIESVNHQVQTQIRRSFHTAEKKGHPKKLIRCIKHAGGDVQRIKRCTVKF
Ga0307289_1003028023300028875SoilMDILRNLFGSLTSGIIRLLVTVGILAAAYFFLVKPVLNTTNHAIDSANKTFEKSFGGSGIDELSKTFDDVNRQVQRQIRRSFHVAQKNGSPKRLIKCIEHADGDSRKIRRCTVKF
Ga0307476_10000341333300031715Hardwood Forest SoilMDLLRNLFGNLTSGIIRLLVAVGILAAAYFFLLKPVLKTTSDTFKEVNKSFSKTFHTKGVDVTDINKTIEEVNKEIQREIKRSLRAAKKNGNPKKLVKCIERAEGNVHKIQHCTVKF
Ga0315910_1000000310023300032144SoilMDFLRNLFGNLTSGIIRLLVTVGILAAAYFFLVKPVLNTTDKAIDSANKSFEKSFGTHGTNVTDISGTIDEVNKQIQREIRKSLKAAERHGNPQKLVKCIQRAHGDVQRIQRCTVKF
Ga0315912_1013880223300032157SoilMDFLRNLFGNLTSGIIRLLVTVGILAAAYFFIVKPVLKTTDNAIDSANQSFEKSFGKDSGLGDIGKTIEDLNKQVQREVRKSLKTAEHDGNPKKLVKCIQRAHGDVARIQHCTVKF
Ga0335070_10000095283300032829SoilMDILRNLFGNLTSGVIRLAVTVGILAAVYFFIVKPVLKTADNAVNTTNSTLQHSLENSGLDNVSKTLEQVNHQVEVQIQRSFHVAKKQGNPKKLIHCIERAQGNVHKIQRCTVKF
Ga0335070_1056215523300032829SoilMEILRNLFGNFVGGLISLLVGVGILAAAYFFVVKPVLHTADHAIDSANKTFEKSFGPGTNLNDIGKTIESVDHQVQRQIRRSFHTAKKHGDPQRLVKCIQRAHGDVHRIRRCTVKY


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.