Metagenome / Metatranscriptome Family F102112

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102112
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	46 residues
Representative Sequence	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD
Number of Associated Samples	69
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.59 %
% of genes near scaffold ends (potentially truncated)	60.78 %
% of genes from short scaffolds (< 2000 bps)	73.53 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.824 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (56.863 % of family members)
Environment Ontology (ENVO)	Unclassified (62.745 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (78.431 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 80.85% β-sheet: 0.00% Coil/Unstructured: 19.15%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF08291	Peptidase_M15_3	6.86
PF13759	2OG-FeII_Oxy_5	6.86
PF13640	2OG-FeII_Oxy_3	3.92
PF16778	Phage_tail_APC	2.94
PF13385	Laminin_G_3	1.96
PF07460	NUMOD3	0.98
PF00622	SPRY	0.98
PF00959	Phage_lysozyme	0.98
PF03237	Terminase_6N	0.98
PF13489	Methyltransf_23	0.98
PF05065	Phage_capsid	0.98
PF01467	CTP_transf_like	0.98
PF05345	He_PIG	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
All Organisms	root	All Organisms	40.20 %
unclassified Hyphomonas	no rank	unclassified Hyphomonas	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Viruses	superkingdom	All Organisms → Viruses	27.45 %
cellular organisms	root	All Organisms → cellular organisms	12.75 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.75 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	7.84 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.65 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	7.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.98 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.98 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.65 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	7.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.98 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.98 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.65 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7.84 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.98 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.98 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.98 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	0.98 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.65 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	6.86 %
Gammaproteobacteria bacterium TMED78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED78	0.98 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.98 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.98 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.98 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	0.98 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.65 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	2.94 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.98 %
Candidatus Kaiserbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kaiserbacteria	0.98 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.98 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	0.98 %
Gammaproteobacteria bacterium TMED78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED78	0.98 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.65 %
Stopavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Stopavirus	2.94 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	0.98 %
Candidatus Kaiserbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kaiserbacteria → Candidatus Kaiserbacteria bacterium	0.98 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.98 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.98 %
Gammaproteobacteria bacterium TMED78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED78	0.98 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.65 %
Pelagibacter virus HTVC011P	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Stopavirus → Pelagibacter virus HTVC011P	2.94 %
Candidatus Pelagibacter sp. TMED203	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	0.98 %
Flavobacteriales bacterium TMED228	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228	0.98 %
Candidatus Kaiserbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kaiserbacteria → Candidatus Kaiserbacteria bacterium	0.98 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.98 %
Gammaproteobacteria bacterium TMED78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED78	0.98 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.65 %
Pelagibacter phage HTVC011P	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Stopavirus → Pelagibacter virus HTVC011P → Pelagibacter phage HTVC011P	2.94 %
Candidatus Pelagibacter sp. TMED203	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	0.98 %
Flavobacteriales bacterium TMED228	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228	0.98 %
Candidatus Kaiserbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kaiserbacteria → Candidatus Kaiserbacteria bacterium	0.98 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.98 %
Gammaproteobacteria bacterium TMED78	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED78	0.98 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10004442	All Organisms → Viruses	7870	Open in IMG/M
3300001419\|JGI11705J14877_10047277	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300001855\|JGI2160J19893_10026861	All Organisms → Viruses → Predicted Viral	1262	Open in IMG/M
3300005346\|Ga0074242_12010764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	600	Open in IMG/M
3300005512\|Ga0074648_1006102	Not Available	9043	Open in IMG/M
3300005512\|Ga0074648_1015697	All Organisms → cellular organisms → Bacteria	4556	Open in IMG/M
3300005611\|Ga0074647_1000479	Not Available	22297	Open in IMG/M
3300005613\|Ga0074649_1071458	Not Available	1375	Open in IMG/M
3300006025\|Ga0075474_10082464	Not Available	1053	Open in IMG/M
3300006025\|Ga0075474_10087116	Not Available	1018	Open in IMG/M
3300006026\|Ga0075478_10088399	Not Available	994	Open in IMG/M
3300006026\|Ga0075478_10216591	Not Available	581	Open in IMG/M
3300006027\|Ga0075462_10018092	All Organisms → Viruses → Predicted Viral	2271	Open in IMG/M
3300006402\|Ga0075511_1792158	Not Available	680	Open in IMG/M
3300006405\|Ga0075510_11116016	All Organisms → Viruses → Predicted Viral	1220	Open in IMG/M
3300006637\|Ga0075461_10041356	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1505	Open in IMG/M
3300006802\|Ga0070749_10574471	Not Available	610	Open in IMG/M
3300006802\|Ga0070749_10579002	Not Available	607	Open in IMG/M
3300006810\|Ga0070754_10142271	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1153	Open in IMG/M
3300006810\|Ga0070754_10336442	Not Available	670	Open in IMG/M
3300006810\|Ga0070754_10353224	Not Available	650	Open in IMG/M
3300006869\|Ga0075477_10367135	Not Available	564	Open in IMG/M
3300006874\|Ga0075475_10053040	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1904	Open in IMG/M
3300006916\|Ga0070750_10045987	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2127	Open in IMG/M
3300006916\|Ga0070750_10130144	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1150	Open in IMG/M
3300007234\|Ga0075460_10222381	Not Available	636	Open in IMG/M
3300007344\|Ga0070745_1060970	Not Available	1531	Open in IMG/M
3300007345\|Ga0070752_1045562	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300007346\|Ga0070753_1245325	Not Available	651	Open in IMG/M
3300007538\|Ga0099851_1133539	Not Available	932	Open in IMG/M
3300007541\|Ga0099848_1050133	Not Available	1684	Open in IMG/M
3300007541\|Ga0099848_1130118	Not Available	945	Open in IMG/M
3300007541\|Ga0099848_1294613	Not Available	558	Open in IMG/M
3300007960\|Ga0099850_1045060	All Organisms → Viruses → Predicted Viral	1895	Open in IMG/M
3300009149\|Ga0114918_10033257	Not Available	3651	Open in IMG/M
3300009149\|Ga0114918_10566652	Not Available	603	Open in IMG/M
3300009450\|Ga0127391_1009267	Not Available	2112	Open in IMG/M
3300009450\|Ga0127391_1092996	Not Available	574	Open in IMG/M
3300009469\|Ga0127401_1137755	Not Available	623	Open in IMG/M
3300009470\|Ga0126447_1022851	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kaiserbacteria → Candidatus Kaiserbacteria bacterium	1574	Open in IMG/M
3300010297\|Ga0129345_1357219	Not Available	502	Open in IMG/M
3300010299\|Ga0129342_1071684	Not Available	1329	Open in IMG/M
3300010354\|Ga0129333_10064086	Not Available	3422	Open in IMG/M
3300010368\|Ga0129324_10029960	All Organisms → Viruses → Predicted Viral	2609	Open in IMG/M
3300010368\|Ga0129324_10033178	All Organisms → Viruses → Predicted Viral	2453	Open in IMG/M
3300010370\|Ga0129336_10051488	All Organisms → cellular organisms → Bacteria	2460	Open in IMG/M
3300012520\|Ga0129344_1101387	Not Available	529	Open in IMG/M
3300017956\|Ga0181580_10482108	Not Available	813	Open in IMG/M
3300017967\|Ga0181590_10120054	All Organisms → Viruses → Predicted Viral	2036	Open in IMG/M
3300021389\|Ga0213868_10220370	All Organisms → Viruses → Predicted Viral	1126	Open in IMG/M
3300021958\|Ga0222718_10214410	Not Available	1043	Open in IMG/M
3300021959\|Ga0222716_10019204	Not Available	5086	Open in IMG/M
3300021959\|Ga0222716_10019786	Not Available	5001	Open in IMG/M
3300021959\|Ga0222716_10616707	Not Available	589	Open in IMG/M
3300021960\|Ga0222715_10054273	All Organisms → Viruses → Predicted Viral	2747	Open in IMG/M
3300021960\|Ga0222715_10092313	All Organisms → Viruses → Predicted Viral	1973	Open in IMG/M
3300021960\|Ga0222715_10098830	All Organisms → Viruses → Predicted Viral	1888	Open in IMG/M
3300021960\|Ga0222715_10296992	Not Available	919	Open in IMG/M
3300021961\|Ga0222714_10271669	Not Available	941	Open in IMG/M
3300021961\|Ga0222714_10521338	Not Available	606	Open in IMG/M
3300021962\|Ga0222713_10843573	Not Available	507	Open in IMG/M
3300022050\|Ga0196883_1000239	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Stopavirus → Pelagibacter virus HTVC011P → Pelagibacter phage HTVC011P	5700	Open in IMG/M
3300022065\|Ga0212024_1019395	All Organisms → Viruses	1099	Open in IMG/M
3300022158\|Ga0196897_1023383	Not Available	752	Open in IMG/M
3300022167\|Ga0212020_1056985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED78	661	Open in IMG/M
3300022167\|Ga0212020_1080192	Not Available	548	Open in IMG/M
3300022176\|Ga0212031_1078793	Not Available	561	Open in IMG/M
3300022176\|Ga0212031_1083251	Not Available	545	Open in IMG/M
3300022176\|Ga0212031_1092000	Not Available	518	Open in IMG/M
3300022187\|Ga0196899_1004237	Not Available	6277	Open in IMG/M
3300022187\|Ga0196899_1132855	Not Available	706	Open in IMG/M
3300022198\|Ga0196905_1021564	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Stopavirus → Pelagibacter virus HTVC011P → Pelagibacter phage HTVC011P	2011	Open in IMG/M
3300022200\|Ga0196901_1183189	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300023170\|Ga0255761_10495452	Not Available	579	Open in IMG/M
3300023176\|Ga0255772_10164160	Not Available	1304	Open in IMG/M
3300023180\|Ga0255768_10454929	Not Available	661	Open in IMG/M
3300025543\|Ga0208303_1001563	Not Available	8899	Open in IMG/M
3300025646\|Ga0208161_1008679	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Stopavirus → Pelagibacter virus HTVC011P → Pelagibacter phage HTVC011P	4371	Open in IMG/M
3300025646\|Ga0208161_1074684	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300025646\|Ga0208161_1147296	Not Available	592	Open in IMG/M
3300025647\|Ga0208160_1029778	All Organisms → Viruses → Predicted Viral	1662	Open in IMG/M
3300025655\|Ga0208795_1020958	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300025655\|Ga0208795_1068422	Not Available	1006	Open in IMG/M
3300025671\|Ga0208898_1019189	unclassified Hyphomonas → Hyphomonas sp.	3075	Open in IMG/M
3300025671\|Ga0208898_1084206	Not Available	1013	Open in IMG/M
3300025674\|Ga0208162_1011681	Not Available	3647	Open in IMG/M
3300025674\|Ga0208162_1037706	All Organisms → Viruses → Predicted Viral	1711	Open in IMG/M
3300025674\|Ga0208162_1201949	Not Available	504	Open in IMG/M
3300025674\|Ga0208162_1203198	Not Available	502	Open in IMG/M
3300025771\|Ga0208427_1025797	All Organisms → Viruses → Predicted Viral	2271	Open in IMG/M
3300025771\|Ga0208427_1191264	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228	655	Open in IMG/M
3300025818\|Ga0208542_1153214	Not Available	626	Open in IMG/M
3300025889\|Ga0208644_1159494	Not Available	1024	Open in IMG/M
3300031539\|Ga0307380_10154512	All Organisms → cellular organisms → Bacteria	2274	Open in IMG/M
3300031539\|Ga0307380_10441137	All Organisms → Viruses → Predicted Viral	1162	Open in IMG/M
3300031565\|Ga0307379_10237131	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300031565\|Ga0307379_10297424	All Organisms → Viruses → Predicted Viral	1594	Open in IMG/M
3300031565\|Ga0307379_10537684	Not Available	1084	Open in IMG/M
3300031566\|Ga0307378_11305246	Not Available	566	Open in IMG/M
3300031673\|Ga0307377_10354077	All Organisms → Viruses → Predicted Viral	1100	Open in IMG/M
3300034374\|Ga0348335_069832	All Organisms → Viruses → Predicted Viral	1236	Open in IMG/M
3300034418\|Ga0348337_103522	Not Available	920	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	93.14%
Terrestrial	Environmental → Terrestrial	6.86%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	83.33%
Soil	Environmental → Terrestrial → Soil	6.86%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	5.88%
Unclassified	Environmental → Aquatic → Unclassified	3.92%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	63.73%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.78%
Clay	Environmental → Terrestrial → Soil → Clay	6.86%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	5.88%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.90%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	3.92%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.94%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	63.73%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.78%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	6.86%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	4.90%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	3.92%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	2.94%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	2.94%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	1.96%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	56.86%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	10.78%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	6.86%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	5.88%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	4.90%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	3.92%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	2.94%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	1.96%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	1.96%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.98%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.98%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.98%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001419	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)	Environmental	Open in IMG/M
3300001855	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12	Environmental	Open in IMG/M
3300005346	Saline sediment microbial community from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300005611	Saline surface water microbial communities from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006402	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006405	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009450	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 4m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009469	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 6m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009470	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, surface; DNA IDBA-UD	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300012520	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022050	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022158	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)	Environmental	Open in IMG/M
3300022167	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)	Environmental	Open in IMG/M
3300022176	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025647	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100044427	3300000116	Marine	MFDNWFKSLDDLHSYKYWKKEVIKFNKKVMQFWKDAFDDLTNNKKDKDE*
JGI11705J14877_100472771	3300001419	Saline Water And Sediment	VKILIITKEKNMFDNWFKSLDEIHTYKYWKKQIIQWNEKTIQFWKDAYEDLTSKKNKD*
JGI2160J19893_100268613	3300001855	Marine Sediment	MFDNWFKSLDDLHSYKYWKKEVIKFNKKVMQFWKDAFDDLTNN
Ga0074242_120107642	3300005346	Saline Water And Sediment	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFDDLFSNNKKED*
Ga0074648_10061023	3300005512	Saline Water And Sediment	MTKVKNMFDNWFKSLDEIHTYKYWKKQIIQWNEKTIQFWKDAYEDLTSKKNKD*
Ga0074648_10156977	3300005512	Saline Water And Sediment	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFDDMFSNNKKED*
Ga0074647_100047944	3300005611	Saline Water And Sediment	MFDNWFKNLDDLHSYKYWKKEVIKFNKKVMQFWKDAFDDLTNNKKDKDE*
Ga0074649_10714582	3300005613	Saline Water And Sediment	MFDNWFKSLDEIHTYKYWKKQIIQWNEKTIQFWKDAYEDLTSKKDKD*
Ga0075474_100824644	3300006025	Aqueous	MFDNWLKSWEDLYTYKYWKKQIIKWNEKTIQFWKDAYEDLSSKKDKD*
Ga0075474_100871162	3300006025	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFND
Ga0075478_100883991	3300006026	Aqueous	WFKSLDDLHSYKYWKKEVIKFNKKVMQFWKDAFDDLTNNKKDKDE*
Ga0075478_102165912	3300006026	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFNDMFSNNKKED*
Ga0075462_100180921	3300006027	Aqueous	RRNNMFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD*
Ga0075511_17921581	3300006402	Aqueous	LIRRNNMFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFNDMFSNNKKED*
Ga0075510_111160163	3300006405	Aqueous	MFDNWFKSLDDLHSYKYWKKEVIKFNKKVMQFWKDAFDDLTNNKKDKE
Ga0075461_100413562	3300006637	Aqueous	MFDNWLKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD*
Ga0070749_105744711	3300006802	Aqueous	LTTPLSTRRNNMFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD*
Ga0070749_105790023	3300006802	Aqueous	LTTPLSTRRNNMFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKNKD*
Ga0070754_101422712	3300006810	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFDDVFSNNKKED*
Ga0070754_103364421	3300006810	Aqueous	SNSTTHLTTPLSTRRNNMFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKNKD*
Ga0070754_103532242	3300006810	Aqueous	MFDNWFKSLDEIHTYKYLKKEIIKFNKKTMHFWKNAFNVMFSNNKKED*
Ga0075477_103671351	3300006869	Aqueous	RRNNMFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLSSKKDKD*
Ga0075475_100530405	3300006874	Aqueous	MFDNWLKSWEDLYTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD*
Ga0070750_100459871	3300006916	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFNDM
Ga0070750_101301443	3300006916	Aqueous	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKNKD*
Ga0075460_102223813	3300007234	Aqueous	KNGGSNSTTHLTTPLSTRRNNMFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKNKD*
Ga0070745_10609703	3300007344	Aqueous	FKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFNDLFSNNKKED*
Ga0070752_10455625	3300007345	Aqueous	MFDNWLKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKNKD*
Ga0070753_12453253	3300007346	Aqueous	NKGETMFDNWLKSWEDLYTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD*
Ga0099851_11335391	3300007538	Aqueous	MFDNWLKSWEDLYTYKYWKKQIIKWNEKTIQFWKDAYED
Ga0099848_10501333	3300007541	Aqueous	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAY
Ga0099848_11301182	3300007541	Aqueous	MFDNWFKSLDEIHTYKYWKKEVIKLNKKMLQFWSDAFEDIFKKDKKKDEE*
Ga0099848_12946132	3300007541	Aqueous	MFDNWLKSWEDLYTYKYWKKQIIKWNKKTIQFWKDAYEDLTSKKDKD*
Ga0099850_10450603	3300007960	Aqueous	MFDNWFKSLDEIHTYKYWKKQIIQWNEKTIQFWKDA
Ga0114918_100332578	3300009149	Deep Subsurface	HTYKYWKKQIIQWNEKTIQFWKDAYEDIRTKKDKD*
Ga0114918_105666521	3300009149	Deep Subsurface	DYLNYRRNNMFDNWFKSLDEIHTYKYWKKQIIQWNEKTIQFWKDAYEDLTSKKDKD*
Ga0127391_10092673	3300009450	Meromictic Pond	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD*
Ga0127391_10929961	3300009450	Meromictic Pond	KNLDDLHSYKYWKKEVIKFNKKVMQFWKDAFDDLTNNKKDKDE*
Ga0127401_11377552	3300009469	Meromictic Pond	MFDNWLKSLDEIHTYKYWKKQIIQWNEKTIQFWKDAYEDLSSKKDKD*
Ga0126447_10228512	3300009470	Meromictic Pond	MFDNWFKSLDEIHTYKYWKKQIIQWNEKTIQFWKDAYEDLSSKKDKD*
Ga0129345_13572191	3300010297	Freshwater To Marine Saline Gradient	MFDNWLKSWEDLYAYKYWKKQIIKWNEKTIQFWKDAYEDLSSKKDKD*
Ga0129342_10716842	3300010299	Freshwater To Marine Saline Gradient	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKK
Ga0129333_100640866	3300010354	Freshwater To Marine Saline Gradient	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLMSKKNKD*
Ga0129324_100299601	3300010368	Freshwater To Marine Saline Gradient	SLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD*
Ga0129324_100331788	3300010368	Freshwater To Marine Saline Gradient	FLIRRNNMFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD*
Ga0129336_100514881	3300010370	Freshwater To Marine Saline Gradient	HTPYYPFLIRRNNMFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD
Ga0129344_11013871	3300012520	Aqueous	MFDNWLKSWEDLYTYKYWKKQIIKWNEKTIQFWKDAYEDLMSKKDKD*
Ga0181580_104821082	3300017956	Salt Marsh	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFNDMFSNNKKED
Ga0181590_101200545	3300017967	Salt Marsh	MWDNWLKNMEDLYTYKYWKKEVIKFNKKVMQFWKDAFDDLTNNKKDKDE
Ga0213868_102203702	3300021389	Seawater	MFDNWFKSLDDLHSYKYWKKEVIKFNKKVMQFWKDAFDDLTNNKKDKDE
Ga0222718_102144102	3300021958	Estuarine Water	MFDNWLKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFDDVFSNNKKD
Ga0222716_1001920411	3300021959	Estuarine Water	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFDDVFSNNKKED
Ga0222716_100197867	3300021959	Estuarine Water	MLDNWMKSLEEIHSYKYWKKQIIKYNEKVIQFWKDAYDDLISSNKKDKE
Ga0222716_106167072	3300021959	Estuarine Water	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFDDVFSNNKKD
Ga0222715_100542734	3300021960	Estuarine Water	MFDNWFKSLDDLHSYKYWKKEVIKFNKKVMQFWKDAFDDLTNNKKDKD
Ga0222715_100923131	3300021960	Estuarine Water	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDA
Ga0222715_100988301	3300021960	Estuarine Water	KNLDDLHSYKYWKKEVIKFNKKVMQFWKDAFDDLTNNKKDKDE
Ga0222715_102969922	3300021960	Estuarine Water	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFNDVFSNNKKED
Ga0222714_102716691	3300021961	Estuarine Water	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFDDVFS
Ga0222714_105213381	3300021961	Estuarine Water	IRRNNMFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD
Ga0222713_108435731	3300021962	Estuarine Water	FDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFNDMFSNNKKED
Ga0196883_10002391	3300022050	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFN
Ga0212024_10193953	3300022065	Aqueous	MFDNWLKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD
Ga0196897_10233831	3300022158	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTRQFWKDAFNDMFSNNKKED
Ga0212020_10569852	3300022167	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAF
Ga0212020_10801922	3300022167	Aqueous	MFDNWLKSWEDLYTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD
Ga0212031_10787931	3300022176	Aqueous	MFDNWLKSWEDLYTYKYWKKQIIKWNEKTIQFWKDAYEDLSSKKDKD
Ga0212031_10832511	3300022176	Aqueous	MFDNWFKSLDDLHSYKYWKKEVIKFNKKVMQFWKD
Ga0212031_10920001	3300022176	Aqueous	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTSKKDKD
Ga0196899_100423710	3300022187	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKD
Ga0196899_11328552	3300022187	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFNDMFS
Ga0196905_10215643	3300022198	Aqueous	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLTS
Ga0196901_11831892	3300022200	Aqueous	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLMSKKDK
Ga0255761_104954522	3300023170	Salt Marsh	MFDNWFKSLDDLHSYKYWKKEVIKFNKKVMQFWKDAFEDLTNNKKDKDE
Ga0255772_101641604	3300023176	Salt Marsh	DNWFKSLDDLHSYKYWKKEVIKFNKKVMQFWKDAFDDLTNNKKDKDE
Ga0255768_104549292	3300023180	Salt Marsh	LHHTLYYPLLIRRNNMFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFNDMFSNNKKED
Ga0208303_100156310	3300025543	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFDDLFSNNKKED
Ga0208161_10086796	3300025646	Aqueous	MFDNWLKSWEDLYTYKYWKKQIIKWNEKTIQFWKDAYEDL
Ga0208161_10746843	3300025646	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFDD
Ga0208161_11472962	3300025646	Aqueous	RNNMFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFDDLFSNNKKED
Ga0208160_10297783	3300025647	Aqueous	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDA
Ga0208795_10209584	3300025655	Aqueous	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYED
Ga0208795_10684221	3300025655	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFNDMFSNNKK
Ga0208898_10191891	3300025671	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFDDLFS
Ga0208898_10842062	3300025671	Aqueous	MFDNWLKSWEDLYTYKYWKKQIIKWNEKTIQFWKDAYEDLSSKKD
Ga0208162_10116816	3300025674	Aqueous	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLM
Ga0208162_10377061	3300025674	Aqueous	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDL
Ga0208162_12019492	3300025674	Aqueous	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYE
Ga0208162_12031982	3300025674	Aqueous	YRRNNMFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFNDMFSNNKKED
Ga0208427_10257977	3300025771	Aqueous	NWFKSLDDLHSYKYWKKEVIKFNKKVMQFWKDAFDDLTNNKKDKDE
Ga0208427_11912641	3300025771	Aqueous	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFWKDAYEDLSSKKDKD
Ga0208542_11532141	3300025818	Aqueous	FDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFDDLFSNNKKED
Ga0208644_11594942	3300025889	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFDDLF
Ga0307380_101545125	3300031539	Soil	TMFDNWFKSLDEIHTYKYWKKQIIQWNEKTIQFWKDAYEDLTSKKDKD
Ga0307380_104411371	3300031539	Soil	MFDNWFKSLDEIHTYKYWKKQIIQWNEKTIQFWKD
Ga0307379_102371312	3300031565	Soil	MFDNWFKSLDEIHTYKYWKKQIIQWNEKTIQFWKDAYEDLTSKKDKD
Ga0307379_102974245	3300031565	Soil	MFDNWFKSLDEIHTYKYWKKQIIKWNEKTIQFCKDAYEDLTSKKDN
Ga0307379_105376841	3300031565	Soil	MFDNWFKSLDEIHTYKYWKKQIIQWNEKTIQFWKDAYEDLSSKKDKD
Ga0307378_113052462	3300031566	Soil	MLDNWLKSWEDLYTYKYWKKQIIKWNENTVQFCKDAYEDLTSKKDKD
Ga0307377_103540771	3300031673	Soil	MFDNWFKSLDEIHTYKYWKKQIIQWNEKTIQFWKDAYEDITSKKDKD
Ga0348335_069832_1_114	3300034374	Aqueous	MFDNWFKSLDEIHTYKYWKKEIIKFNKKTMQFWKDAFD
Ga0348337_103522_19_171	3300034418	Aqueous	MFDNWFKSLDEIHTYKYWKKEVIKLNKKMLQFWSDAFEDIFKKNKKKDEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102112

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences