Metagenome / Metatranscriptome Family F102106

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102106
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	66 residues
Representative Sequence	MSKHDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKDRYIGAGAWEWTRA
Number of Associated Samples	82
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.78 %
% of genes near scaffold ends (potentially truncated)	27.45 %
% of genes from short scaffolds (< 2000 bps)	73.53 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (45.098 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (34.314 % of family members)
Environment Ontology (ENVO)	Unclassified (41.176 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (84.314 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.43% β-sheet: 14.89% Coil/Unstructured: 44.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF14090	HTH_39	8.82
PF04434	SWIM	4.90
PF12705	PDDEXK_1	3.92
PF02675	AdoMet_dc	2.94
PF02511	Thy1	1.96
PF01467	CTP_transf_like	1.96
PF01521	Fe-S_biosyn	1.96
PF06146	PsiE	1.96
PF01171	ATP_bind_3	1.96
PF09953	DUF2187	1.96
PF10614	CsgF	0.98
PF13328	HD_4	0.98
PF01068	DNA_ligase_A_M	0.98
PF07883	Cupin_2	0.98
PF05711	TylF	0.98
PF13640	2OG-FeII_Oxy_3	0.98
PF07486	Hydrolase_2	0.98
PF05050	Methyltransf_21	0.98
PF16473	Rv2179c-like	0.98
PF04055	Radical_SAM	0.98
PF00478	IMPDH	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	4.90
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	4.90
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	4.90
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	2.94
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	1.96
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.96
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	1.96
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	1.96
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	1.96
COG3223	Phosphate starvation-inducible membrane PsiE (function unknown)	General function prediction only [R]	1.96
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	1.96
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	1.96
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	1.96
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.96
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.98
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.98
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.90 %
Unclassified	root	N/A	45.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Viruses	superkingdom	All Organisms → Viruses	39.22 %
cellular organisms	root	All Organisms → cellular organisms	15.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.82 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	6.86 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	6.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	6.86 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	6.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	6.86 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	6.86 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	1.96 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	6.86 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6.86 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	1.96 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.96 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.98 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	6.86 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	4.90 %
Zoogloeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	1.96 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.96 %
Gammaproteobacteria bacterium TMED95	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED95	0.98 %
SAR86 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster	0.98 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	6.86 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4.90 %
Thauera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera	1.96 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.96 %
Nitrincola phage 1M3-16	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Nitrincola phage 1M3-16	0.98 %
SAR86 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	0.98 %
Gammaproteobacteria bacterium TMED95	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED95	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	6.86 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4.90 %
unclassified Thauera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera	1.96 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.96 %
Nitrincola phage 1M3-16	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Nitrincola phage 1M3-16	0.98 %
SAR86 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	0.98 %
Gammaproteobacteria bacterium TMED95	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED95	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.35 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	6.86 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4.90 %
Thauera sp. 27	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera → Thauera sp. 27	1.96 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.96 %
Nitrincola phage 1M3-16	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Nitrincola phage 1M3-16	0.98 %
SAR86 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	0.98 %
Gammaproteobacteria bacterium TMED95	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED95	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000385\|PR_CR_10_Liq_1_inCRDRAFT_1004965	Not Available	5491	Open in IMG/M
3300000418\|P_2C_Liq_1_UnCtyDRAFT_1003346	Not Available	5153	Open in IMG/M
3300001419\|JGI11705J14877_10110179	Not Available	796	Open in IMG/M
3300004369\|Ga0065726_12731	Not Available	23371	Open in IMG/M
3300005512\|Ga0074648_1022848	All Organisms → Viruses → Predicted Viral	3416	Open in IMG/M
3300006025\|Ga0075474_10006603	All Organisms → Viruses → Predicted Viral	4606	Open in IMG/M
3300006025\|Ga0075474_10126811	Not Available	811	Open in IMG/M
3300006026\|Ga0075478_10018690	All Organisms → Viruses → Predicted Viral	2341	Open in IMG/M
3300006637\|Ga0075461_10078259	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300006802\|Ga0070749_10021166	All Organisms → Viruses → Predicted Viral	4122	Open in IMG/M
3300006802\|Ga0070749_10214254	All Organisms → Viruses → Predicted Viral	1100	Open in IMG/M
3300006802\|Ga0070749_10245886	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1014	Open in IMG/M
3300006867\|Ga0075476_10008978	All Organisms → cellular organisms → Bacteria	4532	Open in IMG/M
3300006867\|Ga0075476_10093992	All Organisms → Viruses → Predicted Viral	1158	Open in IMG/M
3300006868\|Ga0075481_10063056	All Organisms → Viruses → Predicted Viral	1407	Open in IMG/M
3300006868\|Ga0075481_10079145	Not Available	1234	Open in IMG/M
3300006869\|Ga0075477_10023775	All Organisms → Viruses → Predicted Viral	2836	Open in IMG/M
3300007236\|Ga0075463_10009000	All Organisms → Viruses → Predicted Viral	3345	Open in IMG/M
3300007344\|Ga0070745_1070829	All Organisms → Viruses → Predicted Viral	1399	Open in IMG/M
3300007538\|Ga0099851_1000160	Not Available	27095	Open in IMG/M
3300007539\|Ga0099849_1079455	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1329	Open in IMG/M
3300007541\|Ga0099848_1009956	Not Available	4217	Open in IMG/M
3300007609\|Ga0102945_1000375	Not Available	13747	Open in IMG/M
3300007609\|Ga0102945_1002031	Not Available	5700	Open in IMG/M
3300007623\|Ga0102948_1034111	Not Available	1665	Open in IMG/M
3300007725\|Ga0102951_1087959	Not Available	886	Open in IMG/M
3300007778\|Ga0102954_1064146	Not Available	1020	Open in IMG/M
3300007960\|Ga0099850_1057401	All Organisms → Viruses → Predicted Viral	1651	Open in IMG/M
3300008012\|Ga0075480_10615301	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Nitrincola phage 1M3-16	513	Open in IMG/M
3300009000\|Ga0102960_1257177	Not Available	618	Open in IMG/M
3300009001\|Ga0102963_1183223	Not Available	838	Open in IMG/M
3300009071\|Ga0115566_10107547	All Organisms → Viruses → Predicted Viral	1785	Open in IMG/M
3300009076\|Ga0115550_1198467	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	676	Open in IMG/M
3300010296\|Ga0129348_1002556	Not Available	6646	Open in IMG/M
3300010296\|Ga0129348_1078773	All Organisms → Viruses → Predicted Viral	1171	Open in IMG/M
3300010296\|Ga0129348_1210071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium	661	Open in IMG/M
3300010299\|Ga0129342_1083118	Not Available	1216	Open in IMG/M
3300010300\|Ga0129351_1040817	All Organisms → Viruses → Predicted Viral	1911	Open in IMG/M
3300010300\|Ga0129351_1314324	Not Available	591	Open in IMG/M
3300010318\|Ga0136656_1011088	All Organisms → cellular organisms → Bacteria → Proteobacteria	3268	Open in IMG/M
3300010389\|Ga0136549_10362879	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	592	Open in IMG/M
3300012528\|Ga0129352_10457592	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	710	Open in IMG/M
3300012528\|Ga0129352_10746694	All Organisms → Viruses → Predicted Viral	1047	Open in IMG/M
3300012967\|Ga0129343_1307414	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	560	Open in IMG/M
3300013010\|Ga0129327_10307417	Not Available	822	Open in IMG/M
3300016781\|Ga0182063_1132880	Not Available	508	Open in IMG/M
3300017824\|Ga0181552_10193631	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1055	Open in IMG/M
3300017949\|Ga0181584_10017032	All Organisms → cellular organisms → Bacteria	5342	Open in IMG/M
3300017949\|Ga0181584_10704414	Not Available	603	Open in IMG/M
3300017950\|Ga0181607_10008383	Not Available	8528	Open in IMG/M
3300017952\|Ga0181583_10143201	All Organisms → Viruses → Predicted Viral	1604	Open in IMG/M
3300017952\|Ga0181583_10234048	All Organisms → Viruses → Predicted Viral	1191	Open in IMG/M
3300017952\|Ga0181583_10661663	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	624	Open in IMG/M
3300017956\|Ga0181580_10001362	Not Available	19415	Open in IMG/M
3300017956\|Ga0181580_10057938	Not Available	2913	Open in IMG/M
3300017956\|Ga0181580_10161325	Not Available	1598	Open in IMG/M
3300017956\|Ga0181580_10950416	Not Available	534	Open in IMG/M
3300017957\|Ga0181571_10142804	All Organisms → Viruses → Predicted Viral	1582	Open in IMG/M
3300017958\|Ga0181582_10051115	All Organisms → Viruses → Predicted Viral	3129	Open in IMG/M
3300017958\|Ga0181582_10429152	Not Available	836	Open in IMG/M
3300017962\|Ga0181581_10152184	All Organisms → Viruses → Predicted Viral	1559	Open in IMG/M
3300017964\|Ga0181589_10578075	Not Available	717	Open in IMG/M
3300017967\|Ga0181590_10514025	Not Available	832	Open in IMG/M
3300017969\|Ga0181585_10126912	All Organisms → Viruses → Predicted Viral	1887	Open in IMG/M
3300017987\|Ga0180431_10103870	All Organisms → Viruses → Predicted Viral	2339	Open in IMG/M
3300018421\|Ga0181592_10740237	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	653	Open in IMG/M
3300018423\|Ga0181593_10078324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera → Thauera sp. 27	2741	Open in IMG/M
3300018424\|Ga0181591_10469371	Not Available	923	Open in IMG/M
3300018426\|Ga0181566_10300455	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1161	Open in IMG/M
3300018428\|Ga0181568_10376187	All Organisms → Viruses → Predicted Viral	1148	Open in IMG/M
3300018428\|Ga0181568_10466265	Not Available	1010	Open in IMG/M
3300019765\|Ga0194024_1099124	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	665	Open in IMG/M
3300020178\|Ga0181599_1258041	Not Available	665	Open in IMG/M
3300021356\|Ga0213858_10265531	Not Available	824	Open in IMG/M
3300021364\|Ga0213859_10061544	Not Available	1786	Open in IMG/M
3300021378\|Ga0213861_10034302	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3396	Open in IMG/M
3300021958\|Ga0222718_10089152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera → Thauera sp. 27	1840	Open in IMG/M
3300021961\|Ga0222714_10099178	All Organisms → Viruses → Predicted Viral	1848	Open in IMG/M
3300022063\|Ga0212029_1029888	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	761	Open in IMG/M
3300022198\|Ga0196905_1110946	Not Available	725	Open in IMG/M
3300022909\|Ga0255755_1343592	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	504	Open in IMG/M
3300022926\|Ga0255753_1000585	Not Available	47066	Open in IMG/M
3300022929\|Ga0255752_10142154	All Organisms → Viruses → Predicted Viral	1213	Open in IMG/M
3300022935\|Ga0255780_10131509	All Organisms → Viruses → Predicted Viral	1401	Open in IMG/M
3300022935\|Ga0255780_10323016	Not Available	720	Open in IMG/M
3300023116\|Ga0255751_10141368	All Organisms → Viruses → Predicted Viral	1427	Open in IMG/M
3300023117\|Ga0255757_10361881	Not Available	681	Open in IMG/M
3300023172\|Ga0255766_10173780	All Organisms → Viruses → Predicted Viral	1204	Open in IMG/M
3300023176\|Ga0255772_10409223	Not Available	680	Open in IMG/M
3300025608\|Ga0209654_1038570	Not Available	1564	Open in IMG/M
3300025646\|Ga0208161_1034517	All Organisms → Viruses → Predicted Viral	1749	Open in IMG/M
3300025653\|Ga0208428_1001622	Not Available	9349	Open in IMG/M
3300025653\|Ga0208428_1033386	All Organisms → Viruses → Predicted Viral	1631	Open in IMG/M
3300025671\|Ga0208898_1069978	All Organisms → Viruses → Predicted Viral	1172	Open in IMG/M
3300025751\|Ga0208150_1117918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED95	858	Open in IMG/M
3300025771\|Ga0208427_1103005	Not Available	984	Open in IMG/M
3300025869\|Ga0209308_10308714	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	657	Open in IMG/M
3300025889\|Ga0208644_1097237	All Organisms → Viruses → Predicted Viral	1459	Open in IMG/M
3300026097\|Ga0209953_1015526	Not Available	1429	Open in IMG/M
3300026123\|Ga0209955_1000333	Not Available	17378	Open in IMG/M
3300026130\|Ga0209961_1058008	Not Available	732	Open in IMG/M
3300026183\|Ga0209932_1109663	Not Available	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	83.33%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	14.71%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Sediment	Environmental → Aquatic → Sediment	0.98%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	41.18%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	35.29%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	13.73%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.92%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.94%
River	Environmental → Aquatic → Freshwater → River	0.98%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	41.18%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	34.31%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	11.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.98%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.98%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	0.98%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	34.31%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	30.39%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	7.84%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	5.88%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	4.90%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.94%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.94%
Enviromental	Environmental → Aquatic → Marine → Unclassified → Unclassified → Enviromental	1.96%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.96%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.98%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.98%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline	0.98%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.98%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	0.98%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.98%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000385	Marine microbial community from Cabo Rojo, Puerto Rico - PR CR 10% Liquid 1	Environmental	Open in IMG/M
3300000418	Marine microbial community from Union City, CA, USA - Pond 2C Liquid 1	Environmental	Open in IMG/M
3300001419	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)	Environmental	Open in IMG/M
3300004369	Saline microbial communities from the South Caspian sea - cas-15	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007609	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG	Environmental	Open in IMG/M
3300007623	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MG	Environmental	Open in IMG/M
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental	Open in IMG/M
3300007778	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300012528	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012967	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300016781	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101409CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017987	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_1 metaG	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022063	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022909	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023117	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300025608	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300026097	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026123	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026130	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026183	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
PR_CR_10_Liq_1_inCRDRAFT_100496510	3300000385	Enviromental	MSLESYYAYHDGKDAWLKDNPGKSERDWDMTGTDVQDQYVDYQMKKRGYKKTRYIGAGAWEWCKV*
P_2C_Liq_1_UnCtyDRAFT_100334613	3300000418	Enviromental	MSKLDSYYAYHAGKDRWLADNPGKTAQDFEYAGVAVQDSYVDPEMEKRGYRKDRYIGAGAWEWRSQQ*
JGI11705J14877_101101791	3300001419	Saline Water And Sediment	MSKYDSYYAMQNAKRKFQSENPSKQFEYAGADVQERYVVPEMEKRGYKKSHY
Ga0065726_1273110	3300004369	Saline	MDYDKYDSYYAMLDGRAKWLKDNPGKTERDWVYAGTDVHDRYIDPEMEKRGYQRSRYIGAGAWEWSRG*
Ga0074648_10228483	3300005512	Saline Water And Sediment	MSKYDSYYAMQNAKRKFQSENPGKRFEYAGADVQERYVGPEMEKRGYKKSRYIGAGAWEWNKS*
Ga0075474_100066032	3300006025	Aqueous	MSKHDSYYAYQDGKDKWIKDNPGKAARDFEYVGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR*
Ga0075474_101268111	3300006025	Aqueous	MSKHDSYYAYQDGKDKWIKDNPGKADRDFEYAGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR*
Ga0075478_100186901	3300006026	Aqueous	MSKHDSYYAYQDGKDKWLKDNPGKAARDFEYAGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR*
Ga0075461_100782591	3300006637	Aqueous	CIMDYNKYDSYYAMLDGRAKWLKDNPGKTERDWVYAGTDVHDQYIDPEMEKRGFVKDIYIGAGAWEWRKV*
Ga0070749_100211663	3300006802	Aqueous	MSKHDSYYAYQDGKDKWIKDNPGKAARDFEYAGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR*
Ga0070749_102142542	3300006802	Aqueous	MDYNKYDSYYAMLDGRDKWLKDDPGKTERDWIYAGTDVHDQYIDPEMEKRGFVKDIYIGAGAWEWRKV*
Ga0070749_102458864	3300006802	Aqueous	MDYNKYDSYYAMLDGRAKWLKDNPGKTERDWVYAGTDVHDQYIDPEMEKRGFVKDIYIGAGAWEW
Ga0075476_100089781	3300006867	Aqueous	MSKNDSYYAYHVGKDKWLADNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKDRYIGAGAWEWTRA*
Ga0075476_100939922	3300006867	Aqueous	MDYDKYDSYYAMLDGRAKWLKDNPGKTERDWVYAGTDVHDRYIDPEMEKRGYQRSRYIGAGAWAWSRG*
Ga0075481_100630566	3300006868	Aqueous	MSKNDSYYAYQDGKNKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGVWEWTRA*
Ga0075481_100791455	3300006868	Aqueous	VSKLNSYYAYYNGKEAWLKDNPGKTERDWNTVGTDIQDQYVNPQMEKYGYKKDRYIGAGAWEWIKT*
Ga0075477_100237759	3300006869	Aqueous	MSKNDSYYAYHVGKDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGVWEWTRA*
Ga0075463_100090006	3300007236	Aqueous	MMSKHDSYYAYQDGKDKWLKDNPGKAARDFEYAGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR*
Ga0070745_10708292	3300007344	Aqueous	MSNLESYYAYQAGKDNWLKDNPGKSPDDFEYAGVDVQDKYVDPEMEKRGYKKSRYIGAGAWEWSKV*
Ga0099851_10001603	3300007538	Aqueous	MSNLESYYAYQAGKDNWLKDNPGKSPDDFEYAGTDVQDKYVDPEMEKRGYKKSRYIGAGAWEWSKV*
Ga0099849_10794555	3300007539	Aqueous	MSKNDTYYAYVDGRDKWLADNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKDRYIGAGAWEWS
Ga0099848_10099568	3300007541	Aqueous	MSNNDSYYAYHEGKNKWLKDNPGKTARDFEYAGVDVQDRYVEPEMEKRGYKKDRYIGAGAWEWSKVK*
Ga0102945_100037512	3300007609	Pond Water	MSKYDSYYAMQNAKRKFQSENPNKQFEYAGADVQERYVGPEMEKRGYKKSRYIGAGAWEWSKL*
Ga0102945_10020318	3300007609	Pond Water	MSKYDSYYAYHAGKDRWLADNPGKTAQDFEYAGVDVQDRYVDPEMEKLGYRKDRYIGAGAWEWSKA*
Ga0102948_10341111	3300007623	Water	MSDSYYAYQDAKKRWLKDNPNKTERDWQYAGTHIQDSYVDPEMEKRGYTKSKYIGAGAWEWSKTR*
Ga0102951_10879591	3300007725	Water	MSDSYYAYQEAKKRWLKDNPNKTERDWQYAGTHIQDSYVDPEMEKRGYTKSKYIGAGAWEWSKTR*
Ga0102954_10641465	3300007778	Water	MSKLDSYYAYQDGRDKWLADNPGKTARDFEYAGVNVQDEYVDPEMEKRGYKKSHYRGHGVWEWTR*
Ga0099850_10574012	3300007960	Aqueous	MMSKHDSYYAYQEGKDKWLKDNPGKAARDFEYAGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR*
Ga0075480_106153012	3300008012	Aqueous	TIMMSKHDSYYAYQDGKDKWLKDNPGKAVRDFEYAGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR*
Ga0102960_12571772	3300009000	Pond Water	MSKNDTYYAYLDGRDKWLKDNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKDRYIGAGAWEWVQANV*
Ga0102963_11832233	3300009001	Pond Water	MSKLDSYYAYQDGRDKWLADNPGKTARDFEYAGVAVQDDYVDPEMEKRGYKKSHYRGHGVWEWTR*
Ga0115566_101075474	3300009071	Pelagic Marine	MSKNDSYYAYQDGMDNWLKDNPGMTARDFEYAGVDVQDRYVDPEMEKRGYTKDRYIGSGAWEWIKNERV*
Ga0115550_11984673	3300009076	Pelagic Marine	MSKNDSYYAYQDGMDNWLKDNPGMTARDFEYAGVDVQDRYVDPEMEKRGYTKDRYIGAGAWEWTKA*
Ga0129348_100255610	3300010296	Freshwater To Marine Saline Gradient	VSKNDSYYAYHAGKDKWLADNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKDRYIGAGAWEWTRA*
Ga0129348_10787733	3300010296	Freshwater To Marine Saline Gradient	MSKNDTYYAYVDGRDKWLADNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKDRYIGAGAWEWSKA*
Ga0129348_12100712	3300010296	Freshwater To Marine Saline Gradient	VNDSYYAYQEGKRKWLKDNPGKTARDFEYAGVDVQDRYVDPEMEKAGYKKDRYIGAGAWEWTKA*
Ga0129342_10831182	3300010299	Freshwater To Marine Saline Gradient	MMSKHDSYYAYQEGKDKWLKDNPGKAARDFEYAGAYVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR*
Ga0129351_10408173	3300010300	Freshwater To Marine Saline Gradient	MSKNDTYYAYVDGRDKWLADNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKDRYIGAGAWNGVKHERV*
Ga0129351_13143242	3300010300	Freshwater To Marine Saline Gradient	MSKNDSYYAYHAGKDKWLADNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKDRYIGAGAWEWTRA*
Ga0136656_10110889	3300010318	Freshwater To Marine Saline Gradient	MSKNDTYYAYHAGKDKWLADNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKDRYIGAGAWEWTRA*
Ga0136549_103628792	3300010389	Marine Methane Seep Sediment	MSTLESYYAYQDGKDAWLNDNPGKTERDWDMAGTDVQDQYVNLEMEKRGYKKTRYIGAGAWEWHKV*
Ga0129352_104575922	3300012528	Aqueous	MDYDKYDSYYAMLDGRAKWLKDNPGKTERDWVYAGTDVHDQYIDPEMEKRGFVKDIYIGAGAWEWRKV*
Ga0129352_107466941	3300012528	Aqueous	MSKNDTYYAYVDGRDKWLADNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKDRYIGAGA
Ga0129343_13074142	3300012967	Aqueous	MSKNDTYYAYVDGRDKWLADNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKDRYIGAGAWEWSTA*
Ga0129327_103074171	3300013010	Freshwater To Marine Saline Gradient	MSNNDSYYAYQEGKRSWLKDNPGKTDREFEYAGVDVQDRYVDPEMEKCGYKKDRYIGAGAWEWVKV*
Ga0182063_11328803	3300016781	Salt Marsh	STHDSYYAMVDGRNRWLKDNPGKTERDWTYAGTDVQDRYVDPEMEKRGFTKSRYIGAGAWEWTRNGR
Ga0181552_101936312	3300017824	Salt Marsh	MNIPIGRQDFNKMSNNDSYYAYQEGKRKWLKDNPSKTDRDFEYAGVDVQDRYVDPEMEKIGYKKDRYIGAGAWEWTKV
Ga0181584_100170325	3300017949	Salt Marsh	MSKHDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGVWEWTRA
Ga0181584_107044142	3300017949	Salt Marsh	MMSKHDSYYAYQDGKDKWLKDNPGKAVRDFEYAGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR
Ga0181607_1000838311	3300017950	Salt Marsh	MSKHDSYYTYQDGKDKWLKDNPGKAVRDFEYAGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR
Ga0181583_101432016	3300017952	Salt Marsh	MSKHDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKSHYRGHGVWEWTRA
Ga0181583_102340482	3300017952	Salt Marsh	MSKHDSYYAYQDGKDKWLKDNPGKAVRDFEYAGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR
Ga0181583_106616632	3300017952	Salt Marsh	MSKNDTYYAYVDGRDKWLADNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKDRYIGAGTWEWSKA
Ga0181580_1000136226	3300017956	Salt Marsh	MSFESLHPGQTRSTMSNHDSYYAYQEGKAKWLKDNPGKTARDFEYAGTDVQDRYVDPEMQKRGYKKDRYIGAGAWEWVKA
Ga0181580_100579381	3300017956	Salt Marsh	MSKHDSYYAYQDGRDKWLRDNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHG
Ga0181580_101613251	3300017956	Salt Marsh	MSKNDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHG
Ga0181580_109504162	3300017956	Salt Marsh	MSKHDSYYAYQDGKDKWLKDNPGKAARDFEYAGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR
Ga0181571_101428041	3300017957	Salt Marsh	RMVHLMSKNDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGVWEWTRA
Ga0181582_100511155	3300017958	Salt Marsh	MSKNDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGVWEWTRA
Ga0181582_104291521	3300017958	Salt Marsh	MSKHDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGV
Ga0181581_101521845	3300017962	Salt Marsh	MSKHDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHG
Ga0181589_105780751	3300017964	Salt Marsh	KNDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGVWEWTRA
Ga0181590_105140251	3300017967	Salt Marsh	YSSMSKHDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGVWEWTRA
Ga0181585_101269126	3300017969	Salt Marsh	MDYDKYDSYYAMLDGRAKWLKDNPGKTERDWVYAGTDVHDRYIDPEMEKRGYQRSRYIGAGAWEWSRG
Ga0180431_101038708	3300017987	Hypersaline Lake Sediment	MSLESYYAYHDGKDAWLKDNPGKSERDWDMIGTAVQDQYVDPQMEKRGYKKTRYIGAGAWEWRKV
Ga0181592_107402371	3300018421	Salt Marsh	DSYYAMLDGRAKWLKDNPGKTERDWVYAGTDVHDQYIDPEMEKRGYQRSRYIGAGAWEWSRG
Ga0181593_100783248	3300018423	Salt Marsh	MSKHDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDQYVDPETEKRGYKKSHYRGHGVWEWTRA
Ga0181591_104693715	3300018424	Salt Marsh	YYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGVWEWTRA
Ga0181566_103004552	3300018426	Salt Marsh	MSNYDSYYAYQEGKAKWLKDNPGKTARDFEYAGTDVQDRYVDPEMQKRGYKKDRYIGAGAWEWVKV
Ga0181568_103761872	3300018428	Salt Marsh	MSFESLHPGQTRSTMSNQDSYYAYQEGKAKWLKDNPGKTARDFEYAGTDVQDRYVDPEMQKRGYKKDRYIGAGAWEWVKA
Ga0181568_104662651	3300018428	Salt Marsh	YTYRQEEVDMSTHDSYYAMVDGRNRWLKDNPGKTERDWTYAGTDVQDRYVDPEMEKRGFTKSRYIGAGAWEWTRNGR
Ga0194024_10991241	3300019765	Freshwater	MSKNDTYYAYVDGRDKWLADNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKDRYIGAGAWEWSKA
Ga0181599_12580411	3300020178	Salt Marsh	MSKHDSYYAYQDGKDKWLKDNPGKAVQDFEYAGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR
Ga0213858_102655311	3300021356	Seawater	GFTVNDSYYAYQEGKRKWLKDNPGKTARDFEYAGVDVQDRYVDPEMEKAGYKKDRYIGAGAWEWTKA
Ga0213859_100615445	3300021364	Seawater	MSKHDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKDRYIGAGAWEWTRA
Ga0213861_100343021	3300021378	Seawater	MSNNDSYYAYQEGKRNWLKDNPGKTDREFEYAGVDVQDRYVDPEMEKCGYKKDRYIGAGAWEWVKV
Ga0222718_100891522	3300021958	Estuarine Water	MSKLDSYYAYQDGRDKWLADNPGKTARDFEYAGVAVQDDYVDPEMEKRGYKKSHYRGHGVWEWTR
Ga0222714_100991786	3300021961	Estuarine Water	GRAKWLKDNPGKTERDWVYAGTDVHDQYIDPEMEKRGFVKDIYIGAGAWEWRKV
Ga0212029_10298882	3300022063	Aqueous	MSNLESYYAYQAGKDNWLKDNPGKSPDDFEYAGTDVQDKYVDPEMEKRGYKKSRYIGAGAWEWSKV
Ga0196905_11109462	3300022198	Aqueous	MSAMSNNDSYYAYHEGKNKWLKDNPGKTARDFEYAGVDVQDRYVEPEMEKRGYKKDRYIGAGAWEWSKVK
Ga0255755_13435922	3300022909	Salt Marsh	ANIIAKMNIPIGRQDFNKMSNNDSYYAYQEGKRKWLKDNPSKTDRDFEYAGVDVQDRYVDPEMEKIGYKKDRYIGAGAWEWTKV
Ga0255753_100058551	3300022926	Salt Marsh	MMSKHDSYYTYQDGKDKWLKDNPGKAVRDFEYAGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR
Ga0255752_101421544	3300022929	Salt Marsh	MSNNDSYYAYQEGKRKWLKDNPSKTDRDFEYAGVDVQDRYVDPEMEKIGYKKDRYIGAGAWEWTKV
Ga0255780_101315091	3300022935	Salt Marsh	MSKNDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGVWE
Ga0255780_103230161	3300022935	Salt Marsh	MMSKHDSYYAYQDGKDKWLKDNPGKAVRDFEYAGADVQNRYVHPEMEKRGFKKRRY
Ga0255751_101413681	3300023116	Salt Marsh	MSKNDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGV
Ga0255757_103618811	3300023117	Salt Marsh	AYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGVWEWTRA
Ga0255766_101737805	3300023172	Salt Marsh	MSKNDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGVWEWT
Ga0255772_104092231	3300023176	Salt Marsh	KRGVYSSMSKHDSYYAYQDGRDKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGVWEWTRA
Ga0209654_10385703	3300025608	Marine	MSQHDSYYAYQDGKDKWLKDNPGKTARDFEYAGTDVQDRYVDPEMEKRGFKKSRYIGAGAWEWTR
Ga0208161_10345173	3300025646	Aqueous	LKSWVMSAMSNNDSYYAYHEGKNKWLKDNPGKTARDFEYAGVDVQDRYVEPEMEKRGYKKDRYIGAGAWEWSKVK
Ga0208428_100162218	3300025653	Aqueous	MSKHDSYYAYQDGKDKWIKDNPGKAARDFEYVGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR
Ga0208428_10333866	3300025653	Aqueous	MSKNDSYYAYQDGKNKWLADNPGKTARDFEYAGVDVQDEYVDPEMEKRGYKKSHYRGHGVWEWTRA
Ga0208898_10699782	3300025671	Aqueous	MSNLESYYAYQAGKDNWLKDNPGKSPDDFEYAGVDVQDKYVDPEMEKRGYKKSRYIGAGAWEWSKV
Ga0208150_11179181	3300025751	Aqueous	MSKHDSYYAYQDGKDKWIKDNPGKAARDFEYAGADVQNRYVHPEMEKRGFKKRRYIGAGAWEWSR
Ga0208427_11030054	3300025771	Aqueous	VSKLNSYYAYYNGKEAWLKDNPGKTERDWNTVGTDIQDQYVNPQMEKYGYKKDRYIGAGAWEWIKT
Ga0209308_103087142	3300025869	Pelagic Marine	MSKNDSYYAYQDGMDNWLKDNPGMTARDFEYAGVDVQDRYVDPEMEKRGYTKDRYIGSGAWEWIKNERV
Ga0208644_10972373	3300025889	Aqueous	MDYNKYDSYYAMLDGRAKWLKDNPGKTERDWVYAGTDVHDQYIDPEMEKRGFVKDIYIGAGAWEWRKV
Ga0209953_10155262	3300026097	Pond Water	MSKYDSYYAMQNAKRKFQSENPNKQFEYAGADVQERYVGPEMEKRGYKKSRYIGAGAWEWSKL
Ga0209955_100033325	3300026123	Water	MSDSYYAYQDAKKRWLKDNPNKTERDWQYAGTHIQDSYVDPEMEKRGYTKSKYIGAGAWEWSKTR
Ga0209961_10580084	3300026130	Water	QGVTMSDSYYAYQEAKKRWLKDNPNKTERDWQYAGTHIQDSYVDPEMEKRGYTKSKYIGAGAWEWSKTR
Ga0209932_11096632	3300026183	Pond Water	MSKNDTYYAYLDGRDKWLKDNPGKTARDFEYAGVDVQDRYVDPEMEKRGYKKDRYIGAGAWEWVQANV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102106

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences