Metagenome / Metatranscriptome Family F102099

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102099
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	149 residues
Representative Sequence	MTRLKRSLEIIAVIIAVHVIVACSFMATKETRQYQPTAIADVKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDSEGFHYWADLKRGLETPSPRRQPDS
Number of Associated Samples	95
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.88 %
% of genes near scaffold ends (potentially truncated)	41.18 %
% of genes from short scaffolds (< 2000 bps)	79.41 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (19.608 % of family members)
Environment Ontology (ENVO)	Unclassified (29.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (35.294 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 19.13% β-sheet: 32.24% Coil/Unstructured: 48.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF02954	HTH_8	32.35
PF00230	MIP	16.67
PF00326	Peptidase_S9	5.88
PF13185	GAF_2	2.94
PF02782	FGGY_C	1.96
PF00924	MS_channel	1.96
PF00535	Glycos_transf_2	0.98
PF13091	PLDc_2	0.98
PF04366	Ysc84	0.98
PF02826	2-Hacid_dh_C	0.98
PF07719	TPR_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	16.67
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.96
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.96
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	68.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.67 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	68.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.67 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	68.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.67 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	68.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.67 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	68.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.67 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Candidatus Nitrospira nitrosa	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	67.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.67 %
Unclassified	root	N/A	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_13283691	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	685	Open in IMG/M
3300000550\|F24TB_10177209	All Organisms → cellular organisms → Bacteria → Proteobacteria	1845	Open in IMG/M
3300000559\|F14TC_101164288	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	821	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1020403	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1006407	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10039659	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1080	Open in IMG/M
3300001431\|F14TB_101183808	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1014	Open in IMG/M
3300004013\|Ga0055465_10345674	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	518	Open in IMG/M
3300005186\|Ga0066676_10206216	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1266	Open in IMG/M
3300005289\|Ga0065704_10243880	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1007	Open in IMG/M
3300005294\|Ga0065705_10927528	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	553	Open in IMG/M
3300005332\|Ga0066388_105652934	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	633	Open in IMG/M
3300005332\|Ga0066388_106671079	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	581	Open in IMG/M
3300005937\|Ga0081455_10419377	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	923	Open in IMG/M
3300006049\|Ga0075417_10155145	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1067	Open in IMG/M
3300006058\|Ga0075432_10036002	All Organisms → cellular organisms → Bacteria → Proteobacteria	1720	Open in IMG/M
3300006844\|Ga0075428_100315136	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1681	Open in IMG/M
3300006845\|Ga0075421_100332800	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1838	Open in IMG/M
3300006846\|Ga0075430_101243392	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	613	Open in IMG/M
3300006847\|Ga0075431_100740992	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	958	Open in IMG/M
3300006852\|Ga0075433_10416739	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300006853\|Ga0075420_100472157	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1083	Open in IMG/M
3300006854\|Ga0075425_101138992	Not Available	888	Open in IMG/M
3300006880\|Ga0075429_101998143	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	502	Open in IMG/M
3300007076\|Ga0075435_100647139	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	917	Open in IMG/M
3300007255\|Ga0099791_10372467	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	686	Open in IMG/M
3300009100\|Ga0075418_10038014	All Organisms → cellular organisms → Bacteria → Proteobacteria	5206	Open in IMG/M
3300009100\|Ga0075418_11528728	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	724	Open in IMG/M
3300009137\|Ga0066709_101613194	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	928	Open in IMG/M
3300009147\|Ga0114129_10434327	All Organisms → cellular organisms → Bacteria → Proteobacteria	1725	Open in IMG/M
3300009157\|Ga0105092_10224310	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1053	Open in IMG/M
3300009162\|Ga0075423_10331111	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1596	Open in IMG/M
3300009162\|Ga0075423_11413251	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	745	Open in IMG/M
3300009168\|Ga0105104_10246417	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	975	Open in IMG/M
3300009609\|Ga0105347_1011856	All Organisms → cellular organisms → Bacteria	2992	Open in IMG/M
3300009801\|Ga0105056_1060888	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	546	Open in IMG/M
3300009807\|Ga0105061_1002196	All Organisms → cellular organisms → Bacteria → Proteobacteria	2180	Open in IMG/M
3300009810\|Ga0105088_1014379	All Organisms → cellular organisms → Bacteria → Proteobacteria	1201	Open in IMG/M
3300009816\|Ga0105076_1011362	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1507	Open in IMG/M
3300009817\|Ga0105062_1003735	All Organisms → cellular organisms → Bacteria → Proteobacteria	2109	Open in IMG/M
3300009837\|Ga0105058_1003415	All Organisms → cellular organisms → Bacteria	2806	Open in IMG/M
3300009837\|Ga0105058_1139941	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	584	Open in IMG/M
3300010046\|Ga0126384_10264662	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300010047\|Ga0126382_10925719	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	757	Open in IMG/M
3300010359\|Ga0126376_10256974	All Organisms → cellular organisms → Bacteria → Proteobacteria	1490	Open in IMG/M
3300010361\|Ga0126378_10740042	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300010362\|Ga0126377_10668636	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1089	Open in IMG/M
3300010376\|Ga0126381_100860186	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1304	Open in IMG/M
3300011417\|Ga0137326_1017648	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1542	Open in IMG/M
3300011430\|Ga0137423_1119242	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	790	Open in IMG/M
3300011432\|Ga0137428_1006363	All Organisms → cellular organisms → Bacteria	3318	Open in IMG/M
3300011434\|Ga0137464_1072579	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	988	Open in IMG/M
3300011435\|Ga0137426_1250858	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	529	Open in IMG/M
3300011445\|Ga0137427_10169290	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	903	Open in IMG/M
3300012038\|Ga0137431_1038869	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1300	Open in IMG/M
3300012160\|Ga0137349_1081752	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	594	Open in IMG/M
3300012173\|Ga0137327_1046568	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	947	Open in IMG/M
3300012208\|Ga0137376_10117410	All Organisms → cellular organisms → Bacteria	2268	Open in IMG/M
3300012211\|Ga0137377_10106110	All Organisms → cellular organisms → Bacteria → Proteobacteria	2665	Open in IMG/M
3300012350\|Ga0137372_10321975	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300012353\|Ga0137367_10310636	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1127	Open in IMG/M
3300012532\|Ga0137373_11115034	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	563	Open in IMG/M
3300012685\|Ga0137397_10209822	All Organisms → cellular organisms → Bacteria → Proteobacteria	1449	Open in IMG/M
3300012922\|Ga0137394_10008154	All Organisms → cellular organisms → Bacteria → Proteobacteria	8127	Open in IMG/M
3300012948\|Ga0126375_11044392	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	669	Open in IMG/M
3300012971\|Ga0126369_11839631	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	694	Open in IMG/M
3300012971\|Ga0126369_12419534	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	611	Open in IMG/M
3300012972\|Ga0134077_10480888	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	547	Open in IMG/M
3300012984\|Ga0164309_11674442	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	545	Open in IMG/M
3300014254\|Ga0075312_1045511	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	825	Open in IMG/M
3300014271\|Ga0075326_1037350	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1258	Open in IMG/M
3300014272\|Ga0075327_1195122	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	645	Open in IMG/M
3300014868\|Ga0180088_1104304	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	514	Open in IMG/M
3300015255\|Ga0180077_1044443	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	869	Open in IMG/M
3300015264\|Ga0137403_10078203	All Organisms → cellular organisms → Bacteria → Proteobacteria	3345	Open in IMG/M
3300015371\|Ga0132258_12468527	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1301	Open in IMG/M
3300015372\|Ga0132256_101330360	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	831	Open in IMG/M
3300015373\|Ga0132257_100306817	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1908	Open in IMG/M
3300015374\|Ga0132255_100580068	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1656	Open in IMG/M
3300019228\|Ga0180119_1129537	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1204	Open in IMG/M
3300021560\|Ga0126371_10982452	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	986	Open in IMG/M
3300027006\|Ga0209896_1003753	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1507	Open in IMG/M
3300027056\|Ga0209879_1000763	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	3998	Open in IMG/M
3300027209\|Ga0209875_1000799	All Organisms → cellular organisms → Bacteria → Proteobacteria	4367	Open in IMG/M
3300027277\|Ga0209846_1000602	All Organisms → cellular organisms → Bacteria → Proteobacteria	6038	Open in IMG/M
3300027379\|Ga0209842_1000217	All Organisms → cellular organisms → Bacteria	10443	Open in IMG/M
3300027511\|Ga0209843_1006539	All Organisms → cellular organisms → Bacteria	2636	Open in IMG/M
3300027513\|Ga0208685_1014989	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300027873\|Ga0209814_10011990	All Organisms → cellular organisms → Bacteria → Proteobacteria	3419	Open in IMG/M
3300027880\|Ga0209481_10020067	All Organisms → cellular organisms → Bacteria	2951	Open in IMG/M
3300027880\|Ga0209481_10423914	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	683	Open in IMG/M
3300027909\|Ga0209382_10341658	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1679	Open in IMG/M
3300031720\|Ga0307469_12067993	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	553	Open in IMG/M
3300031740\|Ga0307468_100175246	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1415	Open in IMG/M
3300031858\|Ga0310892_10635683	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	726	Open in IMG/M
3300032075\|Ga0310890_11564156	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	545	Open in IMG/M
3300032174\|Ga0307470_10163989	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1377	Open in IMG/M
3300032174\|Ga0307470_10601818	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	822	Open in IMG/M
3300032180\|Ga0307471_100073289	All Organisms → cellular organisms → Bacteria → Proteobacteria	2967	Open in IMG/M
3300034147\|Ga0364925_0000629	All Organisms → cellular organisms → Bacteria → Proteobacteria	9886	Open in IMG/M
3300034690\|Ga0364923_0002554	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	3721	Open in IMG/M
3300034820\|Ga0373959_0101729	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	684	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.53%
Host-Associated	Host-Associated	26.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.86%
Plants	Host-Associated → Plants	26.47%
Aquatic	Environmental → Aquatic	16.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.57%
Sediment	Environmental → Aquatic → Sediment	12.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.90%
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Floodplain	Environmental → Terrestrial → Floodplain	1.96%
Marine	Environmental → Aquatic → Marine	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.75%
Sand	Environmental → Terrestrial → Soil → Sand	12.75%
Loam	Environmental → Terrestrial → Soil → Loam	4.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.94%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.75%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	12.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	19.61%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	12.75%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	12.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.94%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.98%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014254	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014868	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D	Environmental	Open in IMG/M
3300015255	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10D	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_132836911	3300000363	Soil	MVAVIFAVQVMVACSSTAPKETRQWQPTTITDLKSVAGKWQGLLVRNPRNREDDWVTFSIGETGAYEFVSYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAEAKDGEGFHYWADLKRESQTLSPRRASEP*
F24TB_101772092	3300000550	Soil	MTRLKPSLEMMAIIIAVHVVVACSATDPKDTRQWRPTTIADFKSVAGKWQGLLVRNPRTRDDDWVTFVISDTGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERILRAVANDGEGFHYWADLKRAPGTPPTRRQPDS*
F14TC_1011642882	3300000559	Soil	MTRLKRSLEIIAIIIAVHVIVACSFMVTKETRQYQPTAIADVKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDGEGFHYWADLK
AF_2010_repII_A01DRAFT_10204032	3300000580	Forest Soil	MTRLKRGIELTAIIIAVHVVVACSMGSKETRQWQPTAIADFKNVSGKWEGLLVRNPRTRDDDWVTFVIGETGTYEFASYRMIGVFAGKGKLVLTDGKLTAKSDKGGQMTLQLYVDSGSSERILRAIANDSDGFHYWADLKRAPTTPPPRRPADT*
AF_2010_repII_A100DRAFT_10064072	3300000655	Forest Soil	MTRLKRGIELTAIIMAVHVVVACSMGSKETRQWQPTAIADFKNVSGKWEGLLVRNPRTRDDDWVTFVIGETGTYEFASYRMIGVFAGKGKLVLTDGKLTAKSDKGGQMTLQLYVDSGSSERILRAIANDSDGFHYWADLKRAPTTPPPRRPADT*
AF_2010_repII_A001DRAFT_100396591	3300000793	Forest Soil	MTRLKRGIELTAIIMAVHVVVACSMGSKETRQWQPTAIADFKNVSGKWEGLLVRNPRTRDDDWVTFVIGETGTYEFASYRMIGVFAGKGKLVLTDGKLTAKSDKGGQMTLQLYVDSGSSERILRAIANDSDGFHYWGDLKRAPTTPPPRRPADT*
F14TB_1011838081	3300001431	Soil	MTRLKPSLEMMAIIIAVHVVVACSATDPKDTRQWRPTTIADFKSVAGKWQGLLVRNPRTRDDDWVTFVISDTGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAI
Ga0055465_103456741	3300004013	Natural And Restored Wetlands	QVVAACSFLAPKEPPQMQPASVADFKSVAGKWHGLLVRNPRTRDDDWVTLVIGEAGTYEFASYRMIGVFAGKGKLVLAGGKLSAKSDKGGEMMLQLYADSESPERILRVVAKDGDGLHYWADLKRAPETSSPRRQSSS*
Ga0066676_102062162	3300005186	Soil	MTRLNRWLEMIAVIVAVQVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLFVRNPRTRDDDWVTLVIGEAGAYEFASYRLIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDSEGFHYWADLKRAPATPPSRRSPDS*
Ga0065704_102438802	3300005289	Switchgrass Rhizosphere	MTRLKPSLEMMAIIIAVHVVVACSATDPKDTRQWRPTTIADFKSVAGKWQGLLVRNPRTRDDDWVTFVISDTGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAIANDSEGFHYWADLKRGSETLSPRRQPDS*
Ga0065705_109275282	3300005294	Switchgrass Rhizosphere	MTRLKRSLEIIAIIIAVHVIVACSFMATKETRQYQPTAIADVKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILR
Ga0066388_1056529341	3300005332	Tropical Forest Soil	MTRLKRSLKMIAIIIAVHVVAGCGATDPKDARQWRPTTIADFKSVAGRWEGLLVRNPRTRDDDWVTFVISDTGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERMLRAEARDSDGFHYWADLKRARETGSPRRQADS*
Ga0066388_1066710791	3300005332	Tropical Forest Soil	MTRCKRSLEMIAAIIAMHVVIACGMMGDKETRKYQPIAIADMKSIAGKWQGLLVRNPRTRDDDWVTLVISETGEYEFASYRMIGVFAGKGKLVLSDGELTAKSDKGGQMTLQLFADSGSSDRILRAVAKDGEGFSYWADLKRGAEAPPARRQFSS*
Ga0081455_104193771	3300005937	Tabebuia Heterophylla Rhizosphere	MVNLVRTMGNELENEMTRLKSSFTMAAIITAVHVMVACSSVSTKEARQWQPTAVADFKGVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAESEKGGQMTLQLLADSGSSERILRAVAKDREGFHYWADLKP
Ga0075417_101551452	3300006049	Populus Rhizosphere	MTRLKRSLEIIAVIIAVHVIVACSFMATKETRQYQPTAIADVKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDSEGFHYWADLKRGLETPSPRRQPDS*
Ga0075432_100360022	3300006058	Populus Rhizosphere	MTRLKRSLEIIAVIIAVHVIVACSFMATKETRQYQPTAIADVKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDSEGFHYWADLKRAPATPPTRRQPDS*
Ga0075428_1003151364	3300006844	Populus Rhizosphere	MTRLKNSFTMAAIITAVHAMVACGSMLTKEERQWQPTAVADFKGVAGKWQGLLVRNPRTRDDDWVTLAIGETGAYELASYRMIGVFAGKGKLVLTDGKLSAESEKGGQMTLQLIADSGSSERILRAVAKDSEGFHYWADLKRAPQ
Ga0075421_1003328001	3300006845	Populus Rhizosphere	MTRLKNSFTMAAIITAVHAMVACGSMLTKEERQWQPTAVADFKGVAGKWQGLLVRNPRTRDDDWVTLAIGETGAYELASYRMIGVFAGKGKLVLTDGKLSAESEKGGQMTLQLIADSGSSERILRAVAKDSEGFHYWADLKRAPQTLSPRRLADS*
Ga0075430_1012433921	3300006846	Populus Rhizosphere	MTRLKPSLEMMAIIIAVHVVVACSATDPKDTRQWQPTTIADFKSVAGKWQGLLVRNPRTRDDDWVTFVISETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSDRILRVEARDSGGYHYWADLKRAPEQLSPRRQSSP*
Ga0075431_1007409922	3300006847	Populus Rhizosphere	MTRLKRSLEIIAVIIAVHVIVACSFMATKETRQYQPTAIADVKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDSEGLHYWADLKRGLETPSPRRQPDS*
Ga0075433_104167391	3300006852	Populus Rhizosphere	MTRLKRSLEIIAVIIAVHVIVACSFMATKETRQYQPTAIADVKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDSEGFHYWADLKRAPGTPPTRRQPDS*
Ga0075420_1004721572	3300006853	Populus Rhizosphere	AKETRQYQPTAIADVKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDSEGLHYWADLKRAPGTPPTRRQPDS*
Ga0075425_1011389922	3300006854	Populus Rhizosphere	MKKIVRFIGLAFLPLVVACSSMAPKETRQWQPTAVTDFKNVVGKWEGLLVRNPRTPDDDWVTLVIGDTGTYQFVSYRLIGVFGGKGKLVLTDGKLSAKSEKGSQMTLQLYADPASTERMLKVDAKDSEGYTYAGELKHTGGSAATK*
Ga0075429_1019981431	3300006880	Populus Rhizosphere	MTRLKPSLEMMAIIIAVHVVVACSATDPKDTRQWRPTTIADFKSVAGKWQGLLVRNPRTRDDDWVTFVISDTGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGGSERMLRAIANDNEGFHYWADL
Ga0075435_1006471391	3300007076	Populus Rhizosphere	MTRLKRSLEIIAVIIAVHVIVACSFMATKETRQYQPTAIADVKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDSEG
Ga0099791_103724671	3300007255	Vadose Zone Soil	AWHPPSVSIKGRGARVINNVRDKYLQEIKMTSLKRGLEMVAVIFAVQVMVACSLTTPKETRQWQPTTITDLKSVAGKWQGLLVRNPRTRDDDWVTFVIGETGAYEFASYRIIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAIANDSEGFHYWADLKRAPGTLSPRRQPDS*
Ga0075418_100380144	3300009100	Populus Rhizosphere	MTRLKNSFTMAAIITAVHAMVACGSMLTKEERQWQPTAVADFKGVAGKWQGLLVRNPRTRDDDWVTLAIGETGAYELASYRMIGVFAGKGKLVLTDGKLSAESEKGGQMTLQLIGDSGSSERILRAVAKDSEGFHYWADLKRAPQTLSPRRLADS*
Ga0075418_115287281	3300009100	Populus Rhizosphere	MTRLKRSLEITAIIVAVEVMVACSFMGAKETRQYQPTVIADFKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDSEGLHYWADLKRGLETPSPRRQPDS*
Ga0066709_1016131942	3300009137	Grasslands Soil	MAIIIAVHVVVACSATDPKETRQWQPTAIADFKNVAGKWQGLLVRNPRTRDDDWVTFVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAIANDSEGFHYWADLKRAPGTLSPRRQPDS*
Ga0114129_104343272	3300009147	Populus Rhizosphere	MVAVIFAVQVMVACSLMAPKETRQWQPTTITDLKSVAGKWQGLLVRNPRNREDDWVTFSIGETGAYEFVSYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAEAKDGEGFHYWADLKRESQTLSPRRASDP*
Ga0105092_102243102	3300009157	Freshwater Sediment	MTRLKPSLEMAIIIAVHAIVGCSSMASKETRQWQPIAIADFKSVAGKWQGLLVRNPRTRDDDWVTFVISDTGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAIANDGEGFHYWADLKRGPETLSPRSQPDS*
Ga0075423_103311111	3300009162	Populus Rhizosphere	LTHVKTWYPPSVSRKGQVARLTRNDVRDKYFQESKMTRLKRSLEIIAVIIAVHVIVACSFMATKETRQYQPTAIADVKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDSEGFHYWADLKRAPATPPTRRQPDS*
Ga0075423_114132511	3300009162	Populus Rhizosphere	EERQWQPTAVADFKGVAGKWQGLLVRNPRTRDDDWVTLAIGETGAYELASYRMIGVFAGKGKLVLTDGKLSAESEKGGQMTLQLIADSGSSERILRAVAKDSEGFHYWADLKRAPQTLSPRRLADS*
Ga0105104_102464172	3300009168	Freshwater Sediment	MAIIIAVHAIVGCSSMASKETRQWQPIAIADFKSVAGKWQGLLVRNPRTRDDDWVTFVISDTGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAIANDGEGFHYWADLKRGSE
Ga0105347_10118562	3300009609	Soil	MATIVTAAYVIVACSFMAPNETRQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYGDSGSPERILRVEAKDSEGLHYWADLKRAPGTLSPRRQADS*
Ga0105056_10608881	3300009801	Groundwater Sand	MTKLNRRLEMIAVIVAVPVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSPERMLRAEAKDSEGFHYWADLKRGLETLSPRRQPDS*
Ga0105061_10021962	3300009807	Groundwater Sand	MIAVIVAVPVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSPERMLRAEAKDSEGFHYWADLKRELETASPRRQNNP*
Ga0105088_10143792	3300009810	Groundwater Sand	MIAVIVAVQVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSPERMLRAEAKDSEGFHYWADLKRELETPSPRRQNNP*
Ga0105076_10113621	3300009816	Groundwater Sand	VIVAVQVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLLVRNPRTRDDDWVTFVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLTAKSDKGGQMTLQLFADSGSPERMLRAEAKDSEGFHYWADLKRELETPSPRRQNNP*
Ga0105062_10037352	3300009817	Groundwater Sand	MIAVIVAVQVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSPERMLRAEAKDSEGFHYWADLKRGLETPSPRRQPDS*
Ga0105058_10034154	3300009837	Groundwater Sand	AVIVAVPVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSPERMLRAEAKDSEGFHYWADLKRELETASPRRQNNP*
Ga0105058_11399411	3300009837	Groundwater Sand	AVIVAVPVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYGDSGSSERMLRAIANDGEGFHYWADLKRGLETPSPRRQPDS*
Ga0126384_102646622	3300010046	Tropical Forest Soil	MTGLKRGLELTAIIIAVHVVVACSTGSKETRQWQPTAIADFKNVSGKWEGLLVRNPRTRDDDWVTFVIGETGTYEFASYRMIGVFAGKGKLVLTDGKLTAKSDKGGQMTLQLYVDSGSSERILRAIANDSDGFHYWADLKRAPTTPPPRRPADT*
Ga0126382_109257192	3300010047	Tropical Forest Soil	MTTLKRRLEMIVIIVAVHVVVGCGATDPKDARQWRPTTITDFKSVAGRWEGLLVRNPRTRDDDWVTLVISDTGAYEFASYRMIGVFAGKGKLVLADGKLSAKSEKGGQMTLQLYADSGSSERMLRAEGRDSDNFHY
Ga0126376_102569742	3300010359	Tropical Forest Soil	MTGLKRGLELTAIIIAVHVVVACSTGSKETRQWQPTAIADFKNVSGKWEGLLVRNPRTRDDDWVTFVIGETGTYEFASYRMIGVFAGKGKLVLTDGKLTAKTDKGGQMTLQLYADSGSSERMLRAIANDGEGFHYWADLKRAPAIPPPRRPPDS*
Ga0126378_107400422	3300010361	Tropical Forest Soil	MAVHVVVACSMGSKETRQWQPTAIADFKNVSGKWEGLLVRNPRTRDDDWVTFVIGETGTYEFASYRMIGVFAGSDKLVITDGKLTAKTDIGGQMTLQLYADSGSSERMLRAIANDGEGFHYWADLKRAPAIPPARRPPDS*
Ga0126377_106686362	3300010362	Tropical Forest Soil	MAVHVVVACSMGSKETRQWQPTAIADFKNVSGKWEGLLVRNPRTRDDDWVTFVIGETGTYEFASYRMIGVFAGKGKLVLTDGKLTAKSDKGGQMTLQLYVDSGSSERILRAIANDSDGFHYWADLKRAPTTPPPRRPADT*
Ga0126381_1008601862	3300010376	Tropical Forest Soil	FQEIKMTRLKRGIELTAIIMAVHVVVACSMGSKETRQWQPTAIADFKNVSGKWEGLLVRNPRTRDDDWVTFVIGETGTYEFASYRMIGVFAGKGKLVLTDGKLTAKSDKGGQMTLQLYVDSGSSERILRAIANDSDGFHYWADLKRAPTTPPPRRPADT*
Ga0137326_10176481	3300011417	Soil	MATIVTAAYVMVACSFMAPNETRQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYGDSGSSERILRVEAKDSEGLHYWADLKRAPGTLSPRRQADS*
Ga0137423_11192421	3300011430	Soil	MATIVTAAYVIVACSFMAPNETRQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYGDSGSSERILRVEAKDSEGLHYWADLKRAPGT
Ga0137428_10063632	3300011432	Soil	MATIVTAAYVIVACSFMAPNETRQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYGDSGSSERILRVEAKDSEGLHYWADLKRAPGTLSPRRQADS*
Ga0137464_10725792	3300011434	Soil	RQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYGDSGSSERILRVEAKDSEGLHYWADLKRAPGTLSPRRQADS*
Ga0137426_12508581	3300011435	Soil	TAAYVIVACSFMAPNETRQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYGDSGSSERILRVEAKDSEGLHYWADLKRAPGTLSPRRQADS*
Ga0137427_101692901	3300011445	Soil	MATIVTAAYVIVACSFMAPKETRQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYGDSGSPERILRVEAKDSEGLHYWADLKRAPGTLTPRRQADS*
Ga0137431_10388691	3300012038	Soil	MATIVTAAYVIVACSFMAPNETRQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLTDGKGIAKSEKGGQMMLQLYADSGSPERILRVEAKDSEGLHYWADLKRAPGTLSPRRQADS*
Ga0137349_10817521	3300012160	Soil	MATIVTAAYVMVACSFMAPKETRQWRTTAITDVKSVSGKWEGLLVRNPRTRDDDWVTFVIGETGTYEFASYRMIGVFAGKGKLVLTDGKGIAKSEKGGQMMLQLYGDSGSPERILRVEAKDSEGLHYWADLKRAPG
Ga0137327_10465682	3300012173	Soil	MATIVTAAYVIVACSFMAPNETRQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYADSGSPERILRVEAKDSEGLHYWADLKRAPGALSPRRQADS*
Ga0137376_101174101	3300012208	Vadose Zone Soil	VRDKYFQEIKMTRLNRWLEMIAVIVAVQVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLFVRNPRTRDDDWVTLVIGEAGAYEFASYRLIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSPERILRAIANDSEGFHYWADLKRAPGTLSPRRQPDS*
Ga0137377_101061102	3300012211	Vadose Zone Soil	VRDKYFQEIKMTRLNRWLEMIAVIVAVQVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLFVRNPRTRDDDWVTLVIGEAGAYEFASYRLIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSPEGILRAIANDSEGFHYWADLKRAPGTLSPRRQPDS*
Ga0137372_103219751	3300012350	Vadose Zone Soil	FQEIKMTRLKRSLEMNAIIIVVHVMVACSFMGAKETRQYQPTAIADFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRLIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSPERILRAVANDSEGFHYWADLKRAPATPPSRRSPDS*
Ga0137367_103106361	3300012353	Vadose Zone Soil	KMTRLKRSLEIIAIIIAVHVIVACSFMATKETRQYQPTAIADFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRLIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSPERILRAVANDSEGFHYWADLKRAPATPPSRRSPDS*
Ga0137373_111150341	3300012532	Vadose Zone Soil	KMTRLKRSLEIIAIIIAVHVIVACSFMATKETRQYQPTAIADVKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDGEGFHYWADLKRAPGIPPTRRQPDS*
Ga0137397_102098222	3300012685	Vadose Zone Soil	MAIMIAVHVVVACSATDPKETRQWQPTAIADFKNVAGKWQGLLVRNPRTRDDDWVTFVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAIANDSEGFHYWADLKRAPGTLSPRRQPDS*
Ga0137394_100081543	3300012922	Vadose Zone Soil	MAIMIAVHVVVACSATDPKETRQWQPTAIADFKNVAGKWQGLLVRNPRTRDDDWVTFVIGETGAYEFASYRIIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAIANDSEGFHYWADLKRAPGTLSPRRQPDS*
Ga0126375_110443921	3300012948	Tropical Forest Soil	AIIIAVHVVVACSTGSKETRQWQPTAIADFKNVSGKWEGLLVRNPRTRDDDWVTFVIGETGTYEFASYRMIGVFAGKGKLVLTDGKLTAKSDKGGQMTLQLYVDSGSSERMLRTIANDSDGFHYWADLKRAPATPPPRRPADT*
Ga0126369_118396311	3300012971	Tropical Forest Soil	RQWQPTAIADFKNVSGKWEGLLVRNPRTRDDDWVTFVIGETGTYEFASYRMIGVFAGKGKLVLTDGKLTAKSDKGGQMTLQLYVDSGSSERILRAIANDSDGFHYWADLKRAPTTPPPRRPADT*
Ga0126369_124195341	3300012971	Tropical Forest Soil	RQWQPTAIADFKNVSGKWEGLLVRNPRTRDDDWVTFVIGETGTYEFASYRMIGVFAGKGKLVLTDGKLTAKTDKGGQMTLQLYADSGSSERMLRAIANDGEGFHYWADLKRAPAIPPPRRPPDS*
Ga0134077_104808881	3300012972	Grasslands Soil	MIAVIVAVQVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLFVRNPRTRDDDWVTLVIGEAGAYEFASYRLIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSPERILRAIANDSEGFHYWADLKRAPGTLSPRRQ
Ga0164309_116744421	3300012984	Soil	KYLQEIKMTRLKRSLEMVAVIFAVQVMVACSLMAPKETRQWQPTTIADLKSVAGKWQGLLVRNPRNREDDWVTFSIGETGAYEFVSYRMIGVFAGKGKLVLTDGKLNAKSDKGGQMTLELFADSGSSQRMLRAIAKDGEGFSYFADLKRTGDASPK*
Ga0075312_10455113	3300014254	Natural And Restored Wetlands	VIVAMQVVAACSFLAPKEPPQMQPASVADFKSVAGKWHGLLVRNPRTRDDDWVTLVIGEAGTYEFASYRMIGVFAGKGKLVLAGGKLSAKSDKGGEMMLQLYADSESPERILRVVAKDSEGFHYWADLKRAPETSSPRRQSSS*
Ga0075326_10373501	3300014271	Natural And Restored Wetlands	MTRLSGRFETIAVIVAMQVVAACSFWAPKEPPQMQPASVADFKSVAGKWHGLLVRNPRTRDDDWVTLVIGEAGTYEFVSYRMIGVFAGKGKLVLAGGKLSAKSDKGGEMMLQLYADSESPERILRVVAKDSEGFHYWADLKRAPETSSPSRQSSS*
Ga0075327_11951221	3300014272	Natural And Restored Wetlands	MPALSRTRPSLAVCLLTNENHEQEIEMTRLSRRFETIAVIVVMQVVAACSFLAPKEPPQMQPASVADFKSVAGKWHGLLVRNPRTRDDDWVTLVIGEAGTYEFASYRMIGVFAGKGKLVLAGGKLSAKSDKGGEMMLQLYADSESPERILRVVAKDSEGFHYWADLKRAP
Ga0180088_11043041	3300014868	Soil	MATIVTAAYVMVACSFMAPKETRQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYGDSGSSERILRVEAKDSEGLHYWADLKRAPGTLSPRRQADS*
Ga0180077_10444431	3300015255	Soil	RTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYGDSGSPERILRVEAKDSEGLHYWADLKRAPGTLSPRRQADS*
Ga0137403_100782034	3300015264	Vadose Zone Soil	MAIIIAVHVVVACSATDPKETRQWQPTAIADFKNVAGKWQGLLVRNLRTRDDDWVTFVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAIANDSEGFHYWADLKRAPGTLSPRRQPDS*
Ga0132258_124685272	3300015371	Arabidopsis Rhizosphere	MIAVIVAVQGMIACSLMDSKEKRQWQPTTITDMKSVAGKWQGLLVRNPRNREDDWVTLAIGETGTYEFVSYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSSERMLRAEAKDGEGFYYWADLKREPQALSPRRASDP*
Ga0132256_1013303601	3300015372	Arabidopsis Rhizosphere	MTGLKNSFTMAAIITAVHAMVACGSMLTKEERQWQPTAVADFKGVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAESEKGGQVTLQLLADSGSSERILRAVAKDSEGFHYWADLKRAPQTLSPRRSADF*
Ga0132257_1003068173	3300015373	Arabidopsis Rhizosphere	MTRLKNSFTMAAIITVVHAMVGCGSMLTKEERQWQPTAVADFKGVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAESEKGGQVTLQLLADSGSSERILRAVAKDSEGFHYWADLKRAPQTLSPRRLADS*
Ga0132255_1005800682	3300015374	Arabidopsis Rhizosphere	MTRLKNSFTMAAIITVVHAMVGCGSMLTKEERQWQPTAVADFKGVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAESEKGGQVTLQLLADSGSSERILRAVAKDSEGFHYWADLKRAPQTLSPPRLADS*
Ga0180119_11295371	3300019228	Groundwater Sediment	IVTAAYVIVACSFMAPNETRQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYGDSGSSERILRVEAKDSEGLHYWADLKRAPGALSPRRQADS
Ga0126371_109824521	3300021560	Tropical Forest Soil	MTRLKRGLELTAIIVAMHVVVACSMGSKETRQWQPTAIADFKNVSGKWEGLLVRNPRTRDDDWVTFVIGETGTYEFASYRMIGVFAGKGKLVLTDGKLTAKTDKGGQMTLQLYADSGSSERMLRAIANDGEGFHYWADLKRAPAIFLARRPP
Ga0209896_10037532	3300027006	Groundwater Sand	KMTKLNRRLEMIAVIVAVPVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSPERMLRAEAKDSEGFHYWADLKRELETPSPRQNNP
Ga0209879_10007631	3300027056	Groundwater Sand	MTKLNRRLEMIAVIVAVQVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSPERMLRAEAKDSEGFHYWADLKRELETPSPRRQNNP
Ga0209875_10007992	3300027209	Groundwater Sand	MTKLNRRLEMIAVIVAVPVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSPERMLRAEAKDSEGFHYWADLKRELETASPRRQNNP
Ga0209846_10006024	3300027277	Groundwater Sand	MTKLNRRLEMIAVIVAVQVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSPERMLRAEAKDSEGFHYWADLKRELETASPRRQNNP
Ga0209842_10002179	3300027379	Groundwater Sand	MTKLNRRLEMIAVIVAVPVMVACSLMAPKETRQWQPTSVTDFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSPERMLRAEAKDSEGFHYWADLKRELETPSPRRQNNP
Ga0209843_10065392	3300027511	Groundwater Sand	MTKLNRRLEMIAVIVAVQVMVACSFMASKETRQWQPTSVTDFKSVAGKWQGLLVRNPRTRDDDWVTLVIGEAGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSPERMLRAEAKDSEGFHYWADLKRELETPSPRRQNNP
Ga0208685_10149894	3300027513	Soil	CSFMAPKETRQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYGDSGSSERILRVEAKDSEGLHYWADLKRAPGTLSPRRQADS
Ga0209814_100119902	3300027873	Populus Rhizosphere	MTRLKRSLEIIAVIIAVHVIVACSFMATKETRQYQPTAIADVKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDSEGFHYWADLKRGLETPSPRRQPDS
Ga0209481_100200674	3300027880	Populus Rhizosphere	ITAIIVAVEVMVACSFMGAKETRQYQPTVIADFKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDSEGFHYWADLKRAPGTPPTRRQPDS
Ga0209481_104239141	3300027880	Populus Rhizosphere	MTRLKNSFTMAAIITAVHAMVACGSMLTKEERQWQPTAVADFKGVAGKWQGLLVRNPRTRDDDWVTLAIGETGAYELASYRMIGVFAGKGKLVLTDGKLSAESEKGGQMTLQLIADSGSSERILRAVAKDSEGFHYWADLKRAPQTLSPRRLADS
Ga0209382_103416582	3300027909	Populus Rhizosphere	MTRLKRSLEIIAVIIAVHVIVACSFMAAKETRQYQPTAIADVKSVAGKWQGLLVRNPRTRDDDWVTLVIGETGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSEKGGQMTLQLYADSGSSERILRAVANDSEGFHYWADLKRAPATPPTRRQPDS
Ga0307469_120679931	3300031720	Hardwood Forest Soil	MTRFKRSLEMVAVIFAVQVMVACSLMAPKETRQWQPTTITDLKSVAGKWQGLLVRNPRNREDDWVTFSIGETGAYEFVSYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAEAKDGEGFHYWA
Ga0307468_1001752462	3300031740	Hardwood Forest Soil	MTRLKPSLEMMAIIIAVHVVVACSATDPKDTRQWRPTTIADFKSVAGKWQGLLVRNPRTRDDDWVTFVISDTGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAIANDSEGFHYWADLKRGSETLSPRRQPDS
Ga0310892_106356831	3300031858	Soil	MTRFKRSLEMIAVIVAVQGMIACSLMDSKEKRQWQPTTITDMKSVAGKWQGLLVRNPRNREDDWVTLAIGETGTYEFVSYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSSERMLRAEAKDGEGFHYWADLKREAQALSPRRASDP
Ga0310890_115641562	3300032075	Soil	SLEMIAVIVAVQGMIACSLMDSKEKRQWQPTTITDMKSVAGKWQGLLVRNPRNREDDWVTLAIGETGTYEFVSYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSSERMLRAEAKDGEGFHYWADLKREAQALSPRRASDP
Ga0307470_101639891	3300032174	Hardwood Forest Soil	EMVAVIFAVQVMVACSLMAPKETRQWQPTTITDLKSVAGKWQGLLVRNPRNREDDWVTFSIGETGAYEFVSYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAEAKDGEGFHYWADLKRESQTLSPRRASDP
Ga0307470_106018181	3300032174	Hardwood Forest Soil	MTRLKPSLEMMAIIIAVHVVVACSATDPKDTRQWRPTTIADFKSVAGKWQGLLVRNPRTRDDDWVTFVISDTGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAIANDSEGFHYWADLKRGSETLSPR
Ga0307471_1000732892	3300032180	Hardwood Forest Soil	MTRFKRSLEMVAVIFAVQVMVACSLMAPKETRQWQPTTITDLKSVAGKWQGLLVRNPRNREDDWVTLAIGETGAYEFVSYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLYADSGSSERMLRAEAKDGEGFHYWADLKRESQTLSPRRASDP
Ga0364925_0000629_4755_5195	3300034147	Sediment	MATIVTAAYVIVACSFMAPNETRQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYGDSGSSERILRVEAKDSEGLHYWADLKRAPGALSPRRQADS
Ga0364923_0002554_128_568	3300034690	Sediment	MATIVTAAYVIVACSFMAPNETRQWRTTAVTDVKSVSGKWEGLLVRNPRTRDDDWVTLVIGETGSYEFASYRMIGVFAGKGKLVLADGKGIAKSEKGGQMMLQLYGDSGSSERILRVEAKDSEGLHYWADLKRAPGTLSPRRQADS
Ga0373959_0101729_91_558	3300034820	Rhizosphere Soil	MTRFKRSLEMIAVIVAVQGMIACSLMDSKEKRQWQPTTITDMKSVAGKWQGLLVRNPRNREDDWVTLAIGETGTYEFVSYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSSERMLRAEAKDGEGFYYWADLKREPQALSPRRASDP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102099

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences