Basic Information | |
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Family ID | F102087 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 102 |
Average Sequence Length | 57 residues |
Representative Sequence | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Number of Associated Samples | 80 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 74.51 % |
% of genes near scaffold ends (potentially truncated) | 71.57 % |
% of genes from short scaffolds (< 2000 bps) | 85.29 % |
Associated GOLD sequencing projects | 70 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (92.157 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (36.274 % of family members) |
Environment Ontology (ENVO) | Unclassified (77.451 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (96.078 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 79.69% β-sheet: 0.00% Coil/Unstructured: 20.31% |
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Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Marine Deep Ocean Marine Aqueous Seawater Sackhole Brine Freshwater To Marine Saline Gradient Marine Sea-Ice Brine Marine Salt Marsh Marine Estuarine Water Pelagic Marine Seawater Marine Seawater Marine Methane Seep Sediment |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2010_100377166 | 3300000101 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDLKETLHMDDIDE* |
DelMOSum2011_100443842 | 3300000115 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFAHS* |
DelMOSum2011_100564072 | 3300000115 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE* |
DelMOSpr2010_100130602 | 3300000116 | Marine | MXXVKLAEYFFXTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLTDDLKETLHMGDIDE* |
DelMOSpr2010_100808822 | 3300000116 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE*QSRRK |
DelMOSpr2010_102585632 | 3300000116 | Marine | AMDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAIRSLIDDLKETLHMDDIDE* |
JGI24006J15134_100024498 | 3300001450 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEEYKYHMGALSAVRSLIDDLKETLHMDDIDE* |
JGI25132J35274_10010048 | 3300002483 | Marine | MDSVKLAEYFFKNLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAIRSLIEDLKETLHMDNIDE* |
Ga0065861_11359532 | 3300004448 | Marine | AEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLTDDLKETLHMGDIDE* |
Ga0075462_100259072 | 3300006027 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAIRSLIDDLKETLHMDDIDE* |
Ga0075462_100818922 | 3300006027 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKE |
Ga0075462_100901271 | 3300006027 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSA |
Ga0075466_10063943 | 3300006029 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLTDDLKETLHMGDIDE* |
Ga0075466_10461943 | 3300006029 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDLKETLHM |
Ga0075466_11112062 | 3300006029 | Aqueous | MDSVKLAEYFFKILRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE* |
Ga0075466_11144162 | 3300006029 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSALRSLIDDLKETLHMDDIDE* |
Ga0098054_10573991 | 3300006789 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFR |
Ga0098055_11709451 | 3300006793 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAF |
Ga0070749_105749262 | 3300006802 | Aqueous | MDSVKLAEYFFKILRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDL |
Ga0075467_100378781 | 3300006803 | Aqueous | KLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0075467_104985371 | 3300006803 | Aqueous | KLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDLKETLHMDDIDE |
Ga0075467_105130782 | 3300006803 | Aqueous | MDSVKLAEYFFKILRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLI |
Ga0070750_103878262 | 3300006916 | Aqueous | MDSVKLAEYFFKILRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVR |
Ga0098050_10048497 | 3300006925 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSL |
Ga0098041_10636621 | 3300006928 | Marine | MDSVKLAEYLFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRS |
Ga0098041_11558561 | 3300006928 | Marine | MDSAKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMD |
Ga0075468_101933082 | 3300007229 | Aqueous | HRQERAMDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE* |
Ga0075460_102705402 | 3300007234 | Aqueous | LAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE* |
Ga0075463_101299681 | 3300007236 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALS |
Ga0070747_11874912 | 3300007276 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDL |
Ga0070745_12871992 | 3300007344 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGA |
Ga0099851_11729942 | 3300007538 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKY |
Ga0099849_11308921 | 3300007539 | Aqueous | VKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE* |
Ga0075480_103257942 | 3300008012 | Aqueous | MDSVKLAEYFFKILRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSL |
Ga0075480_103822181 | 3300008012 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDLKETLHMD |
Ga0114898_10067233 | 3300008216 | Deep Ocean | MDSIKLAEYFFKALRKREQDLVDSLSAGNVQSMEDYKYHMGALSAIRSLIDDLKETLHMDDIDE* |
Ga0115549_10510751 | 3300009074 | Pelagic Marine | QERAMDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE* |
Ga0115552_12785621 | 3300009077 | Pelagic Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDLKET |
Ga0115545_13257731 | 3300009433 | Pelagic Marine | QERAMDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDLKETLHMDDIDE* |
Ga0115546_10537311 | 3300009435 | Pelagic Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAIRSLIDD |
Ga0115560_10958351 | 3300009447 | Pelagic Marine | LAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDLKETLHMDDIDE* |
Ga0098049_12215831 | 3300010149 | Marine | SVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDLKETLHMDDIDE* |
Ga0098059_10520921 | 3300010153 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYH |
Ga0129324_103750252 | 3300010368 | Freshwater To Marine Saline Gradient | FKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE* |
Ga0136549_101087921 | 3300010389 | Marine Methane Seep Sediment | GLGDVYKRQFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE* |
Ga0151669_1069301 | 3300011128 | Marine | MDSVKLAEYFFKTLRKRQQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE* |
Ga0151677_10324293 | 3300011258 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSALRSLIDDLKETLHMDDNDE* |
Ga0182045_10407122 | 3300016726 | Salt Marsh | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMYDIDE |
Ga0182049_10458561 | 3300016736 | Salt Marsh | DSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0181404_11175152 | 3300017717 | Seawater | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGVLSAVRSLIDELKETLHIDDIDE |
Ga0181404_11213372 | 3300017717 | Seawater | FCKTLRKREQDLVDSLAAGNVQSMEEYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0181415_10690761 | 3300017732 | Seawater | MDSVKLAEYFFKTLSKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0181428_10355591 | 3300017738 | Seawater | AEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0181421_10170871 | 3300017741 | Seawater | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSALRSLID |
Ga0181409_10787481 | 3300017758 | Seawater | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYYMGALSAVRSLIDDLKETLHMDDIDE |
Ga0181413_11315201 | 3300017765 | Seawater | RAMDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0187221_10489263 | 3300017769 | Seawater | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYYMGALSAVRSL |
Ga0181386_10379933 | 3300017773 | Seawater | TLRKREQDLVDSLSAGNVQSMEDYKYHMGALSALRSLIDDLKETLHMDDIDE |
Ga0181386_10387091 | 3300017773 | Seawater | YFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0181423_10980423 | 3300017781 | Seawater | QERAMDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0181559_101387043 | 3300018415 | Salt Marsh | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETL |
Ga0181562_101222373 | 3300019459 | Salt Marsh | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMD |
Ga0194029_10289233 | 3300019751 | Freshwater | SVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDLKETLHMDDIDE |
Ga0181555_11006462 | 3300020051 | Salt Marsh | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0211652_100926572 | 3300020379 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDLKETLHMDYIDE |
Ga0213862_100141592 | 3300021347 | Seawater | MDSVKLAEYFFKILRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0206123_101800743 | 3300021365 | Seawater | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDLKETLHMDDIDE |
Ga0213861_103318712 | 3300021378 | Seawater | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDD |
Ga0213861_105110771 | 3300021378 | Seawater | VKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDID |
Ga0222718_100285421 | 3300021958 | Estuarine Water | RQERAMDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0222718_100568777 | 3300021958 | Estuarine Water | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYK |
Ga0222718_101077312 | 3300021958 | Estuarine Water | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSALRSLIDDLKETLHMDDIDE |
Ga0212029_10200121 | 3300022063 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRS |
Ga0212029_10451312 | 3300022063 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLI |
Ga0212024_10716622 | 3300022065 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAIRSLIDDLKETLHMDDIDE |
Ga0212021_10129225 | 3300022068 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAV |
Ga0224906_12068552 | 3300022074 | Seawater | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSALRSL |
Ga0196887_10261411 | 3300022178 | Aqueous | LAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLTDDLKETLHMGDIDE |
Ga0196887_10893742 | 3300022178 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSRIDD |
Ga0196891_10448131 | 3300022183 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDLKETLHMDDID |
Ga0196891_10454971 | 3300022183 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHM |
Ga0196901_10511574 | 3300022200 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVR |
Ga0255775_10153809 | 3300022907 | Salt Marsh | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLH |
Ga0255753_11432061 | 3300022926 | Salt Marsh | FFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0255769_100684523 | 3300022927 | Salt Marsh | MDSVKLAEYFLKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0232123_10024636 | 3300023706 | Salt Marsh | ERAMDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0207896_10556732 | 3300025071 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLTDDLKETLHMGDIDE |
Ga0208919_10625763 | 3300025128 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGAL |
Ga0208919_10819191 | 3300025128 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDY |
Ga0209336_100030767 | 3300025137 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEEYKYHMGALSAVRSLIDDLKETLHMDDIDE |
Ga0209645_100087016 | 3300025151 | Marine | MDSVKLAEYFFKNLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAIRSLIEDLKETLHMDNIDE |
Ga0208182_10195872 | 3300025251 | Deep Ocean | MDSIKLAEYFFKALRKREQDLVDSLSAGNVQSMEDYKYHMGALSAIRSLIDDLKETLHMDDIDE |
Ga0208148_10891672 | 3300025508 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLTDDLKE |
Ga0208134_10865821 | 3300025652 | Aqueous | MDSVKLAEYFFKILRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKET |
Ga0208134_11266602 | 3300025652 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLI |
Ga0209653_11141772 | 3300025695 | Marine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLID |
Ga0208427_11278332 | 3300025771 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKET |
Ga0208425_10467941 | 3300025803 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLIDDLKE |
Ga0208542_11390201 | 3300025818 | Aqueous | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAVRSLIDDLKETLHM |
Ga0208645_12915952 | 3300025853 | Aqueous | MDSVKLAEYFFKILRKREQDLVDSLSAGNVQSMEDYKYHMG |
Ga0307488_101200213 | 3300031519 | Sackhole Brine | MDNVKLAEYFFKTLRQREQDLVDSLSAGNVQSMEDYKYHMGSLSALRSLTDDLKETLHMGDIDE |
Ga0314858_112296_2_157 | 3300033742 | Sea-Ice Brine | MDSVKLAEYFFKTLRKREQDLVDSLSAGNVQSMEDYKYHMGALSAFRSLTDD |
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