Metagenome / Metatranscriptome Family F102069

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102069
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	46 residues
Representative Sequence	MDTLIYIFAGIGVLATVIALYYFIKDQYAIWEMNTYDRLKKKFDW
Number of Associated Samples	74
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	23.53 %
% of genes near scaffold ends (potentially truncated)	21.57 %
% of genes from short scaffolds (< 2000 bps)	65.69 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (26.471 % of family members)
Environment Ontology (ENVO)	Unclassified (79.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.059 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.90% β-sheet: 0.00% Coil/Unstructured: 41.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01258	zf-dskA_traR	14.85
PF13640	2OG-FeII_Oxy_3	8.91
PF02867	Ribonuc_red_lgC	3.96
PF00303	Thymidylat_synt	3.96
PF13759	2OG-FeII_Oxy_5	2.97
PF06067	DUF932	2.97
PF00085	Thioredoxin	1.98
PF06508	QueC	1.98
PF00154	RecA	1.98
PF00398	RrnaAD	1.98
PF02719	Polysacc_synt_2	0.99
PF01242	PTPS	0.99
PF03336	Pox_C4_C10	0.99
PF00175	NAD_binding_1	0.99
PF00037	Fer4	0.99
PF13578	Methyltransf_24	0.99
PF13517	FG-GAP_3	0.99
PF02543	Carbam_trans_N	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	14.85
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	3.96
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	3.96
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	1.98
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	1.98
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	1.98
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	1.98
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	1.98
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.98
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	1.98
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	1.98
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	1.98
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	1.98
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.98
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	1.98
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	1.98
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	1.98
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	0.99
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.99
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.99
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.99
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	0.99
COG2192	Predicted carbamoyl transferase, NodU family	General function prediction only [R]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
All Organisms	root	All Organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
cellular organisms	root	All Organisms → cellular organisms	25.49 %
Viruses	superkingdom	All Organisms → Viruses	7.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	3.92 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	12.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	3.92 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.96 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	12.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.92 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.96 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	12.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.92 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	12.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.92 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.98 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.98 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.98 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	12.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.92 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.98 %
Bacteroidetes bacterium 4572_77	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 4572_77	0.98 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.98 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	12.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.92 %
Leucotheavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Leucotheavirus	0.98 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.98 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.98 %
Bacteroidetes bacterium 4572_77	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 4572_77	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	12.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.92 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.98 %
Leucotheavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Leucotheavirus	0.98 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.98 %
Bacteroidetes bacterium 4572_77	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 4572_77	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	12.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.88 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3.92 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.98 %
Leucotheavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Leucotheavirus	0.98 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.98 %
Bacteroidetes bacterium 4572_77	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 4572_77	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000115\|DelMOSum2011_c10031509	Not Available	2335	Open in IMG/M
3300000116\|DelMOSpr2010_c10009081	Not Available	5245	Open in IMG/M
3300000117\|DelMOWin2010_c10003869	Not Available	9299	Open in IMG/M
3300000117\|DelMOWin2010_c10005712	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	7539	Open in IMG/M
3300000148\|SI47jul10_100mDRAFT_c1000275	Not Available	14167	Open in IMG/M
3300001354\|JGI20155J14468_10004095	Not Available	9911	Open in IMG/M
3300001450\|JGI24006J15134_10037785	Not Available	2065	Open in IMG/M
3300001460\|JGI24003J15210_10038524	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Leucotheavirus	1680	Open in IMG/M
3300001460\|JGI24003J15210_10040241	Not Available	1628	Open in IMG/M
3300001460\|JGI24003J15210_10049564	Not Available	1407	Open in IMG/M
3300001460\|JGI24003J15210_10098606	Not Available	842	Open in IMG/M
3300001460\|JGI24003J15210_10139628	Not Available	634	Open in IMG/M
3300001472\|JGI24004J15324_10008284	Not Available	3839	Open in IMG/M
3300004097\|Ga0055584_100556403	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1196	Open in IMG/M
3300005433\|Ga0066830_10024569	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1192	Open in IMG/M
3300006735\|Ga0098038_1006328	Not Available	4796	Open in IMG/M
3300006735\|Ga0098038_1009994	Not Available	3731	Open in IMG/M
3300006737\|Ga0098037_1185586	Not Available	686	Open in IMG/M
3300006752\|Ga0098048_1013643	Not Available	2815	Open in IMG/M
3300006793\|Ga0098055_1044580	All Organisms → Viruses → Predicted Viral	1803	Open in IMG/M
3300006810\|Ga0070754_10108432	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1364	Open in IMG/M
3300006919\|Ga0070746_10003531	Not Available	9298	Open in IMG/M
3300006919\|Ga0070746_10045653	Not Available	2300	Open in IMG/M
3300006919\|Ga0070746_10050911	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2162	Open in IMG/M
3300006924\|Ga0098051_1105791	Not Available	754	Open in IMG/M
3300007276\|Ga0070747_1197458	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	710	Open in IMG/M
3300009000\|Ga0102960_1015103	All Organisms → Viruses → Predicted Viral	2906	Open in IMG/M
3300009077\|Ga0115552_1162232	Not Available	933	Open in IMG/M
3300009593\|Ga0115011_10172179	All Organisms → Viruses → Predicted Viral	1584	Open in IMG/M
3300009790\|Ga0115012_10123126	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1841	Open in IMG/M
3300012920\|Ga0160423_10234700	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1272	Open in IMG/M
3300012920\|Ga0160423_10304022	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1097	Open in IMG/M
3300012920\|Ga0160423_10584790	Not Available	757	Open in IMG/M
3300012920\|Ga0160423_11046810	Not Available	546	Open in IMG/M
3300012928\|Ga0163110_10140623	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300012936\|Ga0163109_10294312	Not Available	1189	Open in IMG/M
3300012954\|Ga0163111_10001490	All Organisms → cellular organisms → Bacteria	14492	Open in IMG/M
3300012954\|Ga0163111_10082530	All Organisms → cellular organisms → Bacteria	2592	Open in IMG/M
3300012954\|Ga0163111_10760904	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	919	Open in IMG/M
3300017706\|Ga0181377_1052478	Not Available	777	Open in IMG/M
3300017706\|Ga0181377_1063117	Not Available	684	Open in IMG/M
3300017706\|Ga0181377_1076474	Not Available	602	Open in IMG/M
3300017708\|Ga0181369_1019471	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1659	Open in IMG/M
3300017710\|Ga0181403_1013464	Not Available	1752	Open in IMG/M
3300017714\|Ga0181412_1148246	Not Available	529	Open in IMG/M
3300017717\|Ga0181404_1119681	Not Available	642	Open in IMG/M
3300017729\|Ga0181396_1092791	Not Available	614	Open in IMG/M
3300017731\|Ga0181416_1054707	Not Available	942	Open in IMG/M
3300017746\|Ga0181389_1012288	Not Available	2805	Open in IMG/M
3300017751\|Ga0187219_1118561	Not Available	787	Open in IMG/M
3300020165\|Ga0206125_10021878	Not Available	3785	Open in IMG/M
3300020175\|Ga0206124_10115372	Not Available	1103	Open in IMG/M
3300020264\|Ga0211526_1056488	Not Available	663	Open in IMG/M
3300020377\|Ga0211647_10224543	Not Available	602	Open in IMG/M
3300020385\|Ga0211677_10376553	Not Available	555	Open in IMG/M
3300020400\|Ga0211636_10163029	Not Available	878	Open in IMG/M
3300020403\|Ga0211532_10185085	Not Available	837	Open in IMG/M
3300020404\|Ga0211659_10004321	Not Available	7477	Open in IMG/M
3300020404\|Ga0211659_10273707	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	746	Open in IMG/M
3300020414\|Ga0211523_10127254	Not Available	1070	Open in IMG/M
3300020414\|Ga0211523_10127254	Not Available	1070	Open in IMG/M
3300020416\|Ga0211644_10431424	Not Available	545	Open in IMG/M
3300020421\|Ga0211653_10085002	Not Available	1411	Open in IMG/M
3300020428\|Ga0211521_10025935	All Organisms → cellular organisms → Bacteria	3280	Open in IMG/M
3300020438\|Ga0211576_10043770	All Organisms → Viruses → Predicted Viral	2585	Open in IMG/M
3300020438\|Ga0211576_10076746	Not Available	1869	Open in IMG/M
3300020438\|Ga0211576_10282494	Not Available	866	Open in IMG/M
3300020440\|Ga0211518_10012775	Not Available	5624	Open in IMG/M
3300020446\|Ga0211574_10038502	Not Available	2188	Open in IMG/M
3300020450\|Ga0211641_10129398	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300020451\|Ga0211473_10012676	All Organisms → Viruses → Predicted Viral	4093	Open in IMG/M
3300020462\|Ga0211546_10026958	All Organisms → cellular organisms → Bacteria	2836	Open in IMG/M
3300020463\|Ga0211676_10445296	Not Available	697	Open in IMG/M
3300021085\|Ga0206677_10060295	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1922	Open in IMG/M
3300021185\|Ga0206682_10005299	Not Available	10193	Open in IMG/M
3300021378\|Ga0213861_10385063	Not Available	694	Open in IMG/M
3300021957\|Ga0222717_10002019	Not Available	16050	Open in IMG/M
3300021957\|Ga0222717_10068703	Not Available	2263	Open in IMG/M
3300021957\|Ga0222717_10088638	All Organisms → Viruses → Predicted Viral	1946	Open in IMG/M
3300021958\|Ga0222718_10013006	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	6053	Open in IMG/M
3300021959\|Ga0222716_10228243	Not Available	1162	Open in IMG/M
3300021959\|Ga0222716_10425348	Not Available	765	Open in IMG/M
3300022068\|Ga0212021_1066228	Not Available	740	Open in IMG/M
3300022068\|Ga0212021_1121421	Not Available	535	Open in IMG/M
3300024266\|Ga0228661_1035706	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	908	Open in IMG/M
3300025120\|Ga0209535_1000532	Not Available	27290	Open in IMG/M
3300025120\|Ga0209535_1005547	Not Available	7729	Open in IMG/M
3300025120\|Ga0209535_1050811	Not Available	1768	Open in IMG/M
3300025120\|Ga0209535_1070537	Not Available	1374	Open in IMG/M
3300025120\|Ga0209535_1080811	Not Available	1234	Open in IMG/M
3300025137\|Ga0209336_10019725	Not Available	2425	Open in IMG/M
3300025645\|Ga0208643_1139528	Not Available	625	Open in IMG/M
3300025769\|Ga0208767_1004175	Not Available	10251	Open in IMG/M
3300025769\|Ga0208767_1125399	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 4572_77	978	Open in IMG/M
3300025876\|Ga0209223_10200980	Not Available	973	Open in IMG/M
3300025890\|Ga0209631_10141918	Not Available	1309	Open in IMG/M
3300026503\|Ga0247605_1074126	Not Available	840	Open in IMG/M
3300027906\|Ga0209404_10152503	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1407	Open in IMG/M
3300028418\|Ga0228615_1028055	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1844	Open in IMG/M
3300028706\|Ga0257115_1040520	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1462	Open in IMG/M
3300031773\|Ga0315332_10564932	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	711	Open in IMG/M
3300031774\|Ga0315331_10008433	All Organisms → cellular organisms → Bacteria	7680	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.02%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.98%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	35.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified	26.47%
Coastal	Environmental → Aquatic → Marine → Coastal	13.73%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	7.84%
Strait	Environmental → Aquatic → Marine → Strait	6.86%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.90%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.94%
Inlet	Environmental → Aquatic → Marine → Inlet	0.98%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	26.47%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	26.47%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	13.73%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	8.82%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	7.84%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	26.47%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	20.59%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	9.80%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	8.82%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.86%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.88%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	3.92%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.92%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	3.92%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	3.92%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.96%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.98%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.98%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.98%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000148	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 100m	Environmental	Open in IMG/M
3300001354	Pelagic Microbial community sample from North Sea - COGITO 998_met_05	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005433	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45B	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017706	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017729	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020264	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556116-ERR599158)	Environmental	Open in IMG/M
3300020377	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020400	Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020416	Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020446	Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)	Environmental	Open in IMG/M
3300020450	Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300024266	Seawater microbial communities from Monterey Bay, California, United States - 75D	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025876	Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300026503	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 91R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028418	Seawater microbial communities from Monterey Bay, California, United States - 16D	Environmental	Open in IMG/M
3300028706	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_100m	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_100315094	3300000115	Marine	MIDTIIYIFASIGVLATAIALYYFVTDQYAIWEMNTYDRLKKKFDW*
DelMOSpr2010_100090817	3300000116	Marine	MIEFLLYWFAGIGVLATIIGWYYFIKDQYAIWEMNTYERLKKKFDW*
DelMOWin2010_100038692	3300000117	Marine	MIDTLIYIFASIGVLATAIALYYFVTDQYAIWEMNTYDRLKKKFDW*
DelMOWin2010_100057122	3300000117	Marine	MWEFLLYWFAGIGVLATIIGWYYFIKDQYAIWEMNTYDRLKKKFDW*
SI47jul10_100mDRAFT_100027515	3300000148	Marine	METIIYIFAAIGFFAVALGWYYFLRDQYAIWEMNTYDRLKKKFNK*
JGI20155J14468_100040955	3300001354	Pelagic Marine	MIDIIIYIFASIGVLATAIALYYFVTDQYAIWEMDTYDRLKKKFDW*
JGI24006J15134_100377853	3300001450	Marine	MIDTIIYIFASIGVLATAIALYYFVTDQYAXWEMNTYDRLKKKFDW*
JGI24003J15210_100385245	3300001460	Marine	MIDTMIYIFASIGVLATAIALYYFVTDQYAIWEMNTY
JGI24003J15210_100402413	3300001460	Marine	MIDTIIYIFASIGVLATTIALYYFVTDQYAIWEMNTYDRLKKKFDW*
JGI24003J15210_100495643	3300001460	Marine	MIDTIIYIFASIGVLATTIALYYFITDQYAIWEMNTYDRLKNKFDW*
JGI24003J15210_100986063	3300001460	Marine	MIDTIVYIFASIGVLATAIALYYFVIDQYAIWEMNTYDRLKKKFDW*
JGI24003J15210_101396283	3300001460	Marine	MIDILLYFFAGVGIIATLIGWFYFITDQYAIWEMNTYERLKKKFDR*
JGI24004J15324_100082848	3300001472	Marine	MIDTMIYIFASIGVLATAIALYYFVTDQYAIWEMNTYDRLKKKFDW*
Ga0055584_1005564035	3300004097	Pelagic Marine	MVEFLLYWFAGIGVLVSVWGLYLFAKDQYGIWEINTYERLKDKFDW*
Ga0066830_100245695	3300005433	Marine	WEFLLYWFAGIGVLTTILVWYYFIKDQYGIWEINTYERLKKKFDW*
Ga0098038_100632812	3300006735	Marine	MDTLIYIFAGIGVLATVIALYYFIKDQYAIWEMNTYDRLKKKFDW*
Ga0098038_10099943	3300006735	Marine	MDTLVYIFAGIGVLATVIALYYFIKDQYAIWEMNTYERLKKKFDW*
Ga0098037_11855863	3300006737	Marine	MDTLVYIFAGIGVLATSIALYYFIKDQYAIWEMNTY
Ga0098048_10136434	3300006752	Marine	MDTLVYIFAGIGVLATSIALYYFIKDQYAIWEMNTYERLKKKFDW*
Ga0098055_10445805	3300006793	Marine	METIINIFAVIGVLTTIIGLYYFTKDQYAIWEMNTYDRLKKKFNNR*
Ga0070754_101084325	3300006810	Aqueous	MIDTLIYIFASIGVLATAIALYYFVTDQYAIWEMNTYDRLK
Ga0070746_100035312	3300006919	Aqueous	MIDTLIYIFASIGVLATAIALYYFITDQYAIWEMNTYDRLKKKFDW*
Ga0070746_100456534	3300006919	Aqueous	MIDTLIYIFASIGVLATVIALYYFITDQYAIWEMNTYDRLKKKFDW*
Ga0070746_100509113	3300006919	Aqueous	MIDILIYFFAGVGIIATLVGWYYFITDQYAIWEMNTYERLKKKFDR*
Ga0098051_11057913	3300006924	Marine	MWEFLLYLFAGIGVLATIIGGYYFAKDQYAIWEMNTYDRLKNKFDW*
Ga0070747_11974582	3300007276	Aqueous	MIDTLIYLFATIGVLVTGAGIYLFAKDQYGIWEIDTYERLKKKFDNK*
Ga0102960_10151038	3300009000	Pond Water	MWEFILYWFAGIGVLTTILGWYYFIKDQYGIWEINTYERLKKKFDW*
Ga0115552_11622325	3300009077	Pelagic Marine	MIDIIIYIFASIGVLATAIALYYFVTDQYAIWEMNTYDRLKKKFDW*
Ga0115011_101721793	3300009593	Marine	MDTVIHIFAGIGVFATVIAGYYFAKDQYAIWEMNTYERLKKKFDW*
Ga0115012_101231263	3300009790	Marine	MDTIIYIFAGIGVLATIIALYYFGKDQYAIWEMNTYDRLKKKFNNR*
Ga0160423_102347004	3300012920	Surface Seawater	DTVINIFAGIGVLATIIALYYFAKDQYAIWEMNTYDRLKKKFDK*
Ga0160423_103040223	3300012920	Surface Seawater	METVINIFAGIGVLATIIALYYFAKDQYAIWEMNTYDRLKKKFNNR*
Ga0160423_105847901	3300012920	Surface Seawater	MDTVINIFAGIGVLATVIALYYFAKDQYAIWEMNTYD
Ga0160423_110468102	3300012920	Surface Seawater	METIIYIFAGIGVLATIIALYYFAKDQYAIWEMNTYDRLKKKFNNR*
Ga0163110_101406235	3300012928	Surface Seawater	MDTVINIFAGIGVLATVIALYYFAKDQYAIWEMNTYDRLKKKFNNR*
Ga0163109_102943125	3300012936	Surface Seawater	MDTLIYIFAGIGVLATVIASYYFIKDQYAIWEMNTYERLKKKFDW*
Ga0163111_1000149013	3300012954	Surface Seawater	MEMIINIFAFIGVFATLVAGYHFAKDQYGIWEMNTYERLKKKFDK*
Ga0163111_100825301	3300012954	Surface Seawater	MDTVINIFAGIGVLATVIALYYFAKDQYAIWEMNTYDR
Ga0163111_107609043	3300012954	Surface Seawater	FNMDTVINIFAGIGVLATVIALYYFAKDQYAIWEMNTYDRLKKKFDK*
Ga0181377_10524782	3300017706	Marine	MIDIIIYIFAAIGFFAVALGWYYFLRDQYAIWEMNTYDKLKKKFNKE
Ga0181377_10631172	3300017706	Marine	MIDTIIYIFASIGVLATVIALYYFVTDQYAIWEMNTYERLKKKFDW
Ga0181377_10764742	3300017706	Marine	MWEFLLYWFAGIGVLATVIGGYYFAKDQYAIWEMNTYDRLKKKFDW
Ga0181369_10194712	3300017708	Marine	MDTLIYIFASIGVLATSIALYYFIKDQYAIWEMNTYERLKKKFDW
Ga0181403_10134641	3300017710	Seawater	MIDTIIYIFASIGVLATAIALYYFVIDQYAIWEMNTYDRLKKKFDW
Ga0181412_11482463	3300017714	Seawater	METIINIFAVIGVLATIIGLYYFTKDQYAIWEMNTYDRLKKKFDW
Ga0181404_11196813	3300017717	Seawater	MIDTIVYIFASIGVLATAIALYYFVIDQYAIWEMNTYDRLKKKFD
Ga0181396_10927911	3300017729	Seawater	GYMDTLVYIFAGIGVLATSIALYYFIKDQYAIWEMNTYERLKKKFDW
Ga0181416_10547075	3300017731	Seawater	MDTLVYIFAGIGVLATVIALYYFVTDQYAIWEMNTYDRLKKKFDW
Ga0181389_10122882	3300017746	Seawater	MIDTIIYIFASIGVLATVIALYYFVTDQYAIWEMNTYDRLKKKFDW
Ga0187219_11185612	3300017751	Seawater	MIDTIIYIFASIGVLATVIALYYFVTDQYAIWEMNTYDRL
Ga0206125_100218784	3300020165	Seawater	MIDILIYFFAGVGIIATLVGWYYFITDQYAIWEMNTYERLKKKFDR
Ga0206124_101153722	3300020175	Seawater	MWEFLLYWFAGIGALATIIFWYYFIKDQYAIWEMNTYDRLKKKFDW
Ga0211526_10564882	3300020264	Marine	MMINPYRFNMETVINIFAGIGVLATTIALYYFAKDQYAIWEMNTYDRLKKKFNNR
Ga0211647_102245433	3300020377	Marine	MMINLYRFNMETVINIFAGIGVLATIIALYYFAKDQYAIWEMNTYDRLKKKFNNR
Ga0211677_103765531	3300020385	Marine	MIDTIIYIFASIGVLATAIALYYFITDQYAIWEMNTYDRLKKKFDW
Ga0211636_101630293	3300020400	Marine	MMINHYRFNMDTVINIFAGIGVLATIIALYYFAKDQYAIWEMNTYDRLKKKFDK
Ga0211532_101850852	3300020403	Marine	MDTLIYIFAGIGVLATTIALYYFIKDQYAIWEMNTYERLKKKFDW
Ga0211659_1000432110	3300020404	Marine	MDTLVYIFAGIGVLATIIALYYFIKDQYAIWEMNTYERLKKKFDW
Ga0211659_102737072	3300020404	Marine	MMINLYRFNMDTVINIFAGIGVLATVIALYYFAKDQYAIWEMNTYDRLKKKFDK
Ga0211523_101272541	3300020414	Marine	MMINPYRFNMETVINIFAGIGVLATTIALYYFAKDQYAIWEMNTYDRLKKK
Ga0211523_101272544	3300020414	Marine	MMEFLLYWFAGIGVLATLVGLYYFAKDQYAIWEMNTYDRLKKKFNNR
Ga0211644_104314243	3300020416	Marine	MDTVINIFAGIGVLATVIALYYFAKDQYAIWEMNTYDRLKK
Ga0211653_100850023	3300020421	Marine	MDTLVYIFAGIGVLATVIALYYFIKDQYAIWEMNTYERLKKKFDW
Ga0211521_100259356	3300020428	Marine	MDNIIYIFAFIGIMATVIGMYYFAKDQYAIWEMNTYERLKKKFDR
Ga0211576_100437705	3300020438	Marine	MTTIDFLLYWFAGIGVLASLIGIYYFVTDQYAIWEMNTYDRLKKKFNNR
Ga0211576_100767465	3300020438	Marine	MDTLVYIFAGIGVLATSIALYYFIKDQYAIWEMNTYERLKKKFDW
Ga0211576_102824943	3300020438	Marine	MIDTIVYIFASIGVLATAIALYYFVIDQYAIWEMNTYDRLKKKFDW
Ga0211518_100127756	3300020440	Marine	MDTLIYIFAGIGVLATVIALYYFIKDQYAIWEMNTYDRLKKKFDW
Ga0211574_100385024	3300020446	Marine	METVINIFAGIGVLATIIALYYFAKDQYAIWEMNTYDRLKKKFNNR
Ga0211641_101293981	3300020450	Marine	MMINPYRFNMDTVINIFAGIGVLATIIALYYFAKDQYAIWEMNTYDRLKKKF
Ga0211473_100126767	3300020451	Marine	MMINPYRFNMETVINIFAGIGVLATVIALYYFAKDQYAIWEMNTYDRLKKKFNNR
Ga0211546_100269581	3300020462	Marine	KMMINPYRFNMETVINIFAGIGVLATVIALYYFAKDQYAIWEMNTYDRLKKKFNNR
Ga0211676_104452962	3300020463	Marine	MEMIINIFAFIGVFATLVAGYHFAKDQYGIWEMNTYERLKKKFDK
Ga0206677_100602952	3300021085	Seawater	MTAIDFLLYWFAGIGVLVTVWGLYLFAKDQYAIWEMNTYERLKKKFNW
Ga0206682_100052996	3300021185	Seawater	METIINIFAVIGVLATIIGLYYFTKDQYAIWEMNTYDRLKKKFNNR
Ga0213861_103850631	3300021378	Seawater	DTIIYIFASIGVLATAIALYYFVTDQYAIWEMNTYDRLKKKFDW
Ga0222717_1000201921	3300021957	Estuarine Water	MWEFLLYLFAGIGVLATIIGGYYFAKDQYAIWEMNTYDRLKNKFDW
Ga0222717_100687035	3300021957	Estuarine Water	MVEFLLYWFAGIGVLVTVWGLFLFAKDQYGIWEMNTYERLKKKFNW
Ga0222717_100886382	3300021957	Estuarine Water	MWEFILYWFAGIGVLTTILGWYYFIKDQYGIWEINTYERLKKKFDW
Ga0222718_1001300611	3300021958	Estuarine Water	MWEFLLYWFAGIGVLATIIGWYYFIKDQYAIWEMNTYDRLKKKFDW
Ga0222716_102282431	3300021959	Estuarine Water	EDNMWEFLLYWFAGIGVLATIIGWYYFIKDQYAIWEMNTYDRLKKKFDW
Ga0222716_104253485	3300021959	Estuarine Water	DTLVYIFAGIGVLATVIALYYFIKDQYAIWEMNTYERLKKKFDW
Ga0212021_10662281	3300022068	Aqueous	MIDTIIYIFASIGVLATAIALYYFVTDQYAIWEMNTYDRLKKKFDW
Ga0212021_11214211	3300022068	Aqueous	MIDTLIYIFASIGVLATVIALYYFITDQYAIWEMNTYDRLKKKFDW
Ga0228661_10357064	3300024266	Seawater	IMTAIDFLLYWFAGIGVLVTVWGLYLFAKDQYAIWEMNTYERLKKKFNW
Ga0209535_100053239	3300025120	Marine	MIDTLIYLFATIGVLVTGAGIYLFAKDQYGIWEIDTYERLKKKFDNK
Ga0209535_10055476	3300025120	Marine	MDTIIYIFAGIGVLATSIALYYFITDQYAIWEMNTYDRLKKKFDW
Ga0209535_10508112	3300025120	Marine	MIDILLYFFAGVGIIATLIGWFYFITDQYAIWEMNTYERLKKKFDR
Ga0209535_10705373	3300025120	Marine	MIDTIIYIFASIGVLATTIALYYFVTDQYAIWEMNTYDRLKKKFDW
Ga0209535_10808112	3300025120	Marine	MIDTIIYIFASIGVLATTIALYYFITDQYAIWEMNTYDRLKNKFDW
Ga0209336_100197253	3300025137	Marine	MIDTLIYIFASIGVLATVIALYYFVTDQYAIWEMNTYDRLKKKFNW
Ga0208643_11395282	3300025645	Aqueous	MIDILIYFFAGVGIIATLVGWYYFITDQYAIWEMNTYDRLKKKFDW
Ga0208767_10041751	3300025769	Aqueous	MIDTLIYIFASIGVLATAIALYYFVTDQYAIWEMNTYDRLKKKFDW
Ga0208767_11253991	3300025769	Aqueous	LIYFFAGVGIIATLVGWYYFITDQYAIWEMNTYERLKKKFDR
Ga0209223_102009805	3300025876	Pelagic Marine	MIDIIIYIFASIGVLATAIALYYFVTDQYAIWEMDTYDRLKKKFDW
Ga0209631_101419181	3300025890	Pelagic Marine	MIDTLIYIFASIGVLATAIALYYFVTDQYAIWEMNTYERLKKKFDW
Ga0247605_10741261	3300026503	Seawater	MTAIDFLLYWFAGIGVLVTVWGLYLFAKDQYAIWEMNTY
Ga0209404_101525033	3300027906	Marine	MDTVIHIFAGIGVFATVIAGYYFAKDQYAIWEMNTYERLKKKFDW
Ga0228615_10280555	3300028418	Seawater	METIINIFAVIGVLATIIGLYYFTKDQYAIWEMYTYDRLKKKFNNR
Ga0257115_10405204	3300028706	Marine	MWEFILYWFAGIGVLATIIGWYYFIKDQYAIWEMNTYDRLKKKFDW
Ga0315332_105649321	3300031773	Seawater	RFNMDTVINIFAGIGVLATVIALYYFAKDQYAIWEMNTYDRLKKKFDK
Ga0315331_1000843310	3300031774	Seawater	MDTVINIFAGIGVLATVIALYYFAKDQYAIWEMNTYDRLKKKFDK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102069

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences