Metagenome Family F102001

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102001
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	56 residues
Representative Sequence	MELPIDEVLKEMRETIGIQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP
Number of Associated Samples	64
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.31 %
% of genes near scaffold ends (potentially truncated)	38.24 %
% of genes from short scaffolds (< 2000 bps)	69.61 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.784 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (63.726 % of family members)
Environment Ontology (ENVO)	Unclassified (93.137 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (98.039 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.88% β-sheet: 0.00% Coil/Unstructured: 49.12%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13884	Peptidase_S74	47.06
PF11598	COMP	12.75
PF05709	Sipho_tail	6.86
PF05257	CHAP	1.96
PF06605	Prophage_tail	0.98
PF01391	Collagen	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG4722	Phage-related protein YomH	Mobilome: prophages, transposons [X]	6.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
All Organisms	root	All Organisms	39.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
cellular organisms	root	All Organisms → cellular organisms	26.47 %
Viruses	superkingdom	All Organisms → Viruses	12.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.84 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	23.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.84 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.84 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.84 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.84 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	3.92 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.96 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.84 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.92 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.96 %
Corynebacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.84 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.92 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1.96 %
Corynebacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.84 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.92 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	1.96 %
Corynebacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.84 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.92 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	1.96 %
Corynebacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium	1.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000162\|TB03JUN2009H_c007832	Not Available	1646	Open in IMG/M
3300000162\|TB03JUN2009H_c023192	Not Available	678	Open in IMG/M
3300000176\|TB03JUN2009E_c000894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8095	Open in IMG/M
3300000176\|TB03JUN2009E_c001195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6807	Open in IMG/M
3300000203\|TB18AUG2009E_c000399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8308	Open in IMG/M
3300000203\|TB18AUG2009E_c007278	Not Available	1494	Open in IMG/M
3300000203\|TB18AUG2009E_c013823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	955	Open in IMG/M
3300000203\|TB18AUG2009E_c037649	Not Available	500	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1049012	Not Available	1521	Open in IMG/M
3300002091\|JGI24028J26656_1001850	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4316	Open in IMG/M
3300002092\|JGI24218J26658_1008883	Not Available	1762	Open in IMG/M
3300002307\|JGI24890J29729_1076345	Not Available	537	Open in IMG/M
3300002933\|G310J44882_10006035	Not Available	4081	Open in IMG/M
3300002933\|G310J44882_10038081	All Organisms → Viruses → Predicted Viral	1115	Open in IMG/M
3300002933\|G310J44882_10062833	Not Available	809	Open in IMG/M
3300003783\|Ga0007850_1000140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	7549	Open in IMG/M
3300003783\|Ga0007850_1003793	All Organisms → Viruses → Predicted Viral	1389	Open in IMG/M
3300003783\|Ga0007850_1017971	Not Available	528	Open in IMG/M
3300003787\|Ga0007811_1008349	All Organisms → Viruses → Predicted Viral	1043	Open in IMG/M
3300003797\|Ga0007846_1022000	Not Available	546	Open in IMG/M
3300003798\|Ga0007842_1000197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5579	Open in IMG/M
3300003798\|Ga0007842_1008484	Not Available	698	Open in IMG/M
3300003806\|Ga0007864_1000529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4823	Open in IMG/M
3300003806\|Ga0007864_1000558	Not Available	4666	Open in IMG/M
3300003813\|Ga0007879_1001334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4395	Open in IMG/M
3300003820\|Ga0007863_1019640	Not Available	578	Open in IMG/M
3300003820\|Ga0007863_1020420	Not Available	564	Open in IMG/M
3300004686\|Ga0065173_1093610	Not Available	540	Open in IMG/M
3300004686\|Ga0065173_1102591	Not Available	513	Open in IMG/M
3300004692\|Ga0065171_1022326	Not Available	1018	Open in IMG/M
3300004692\|Ga0065171_1048576	Not Available	679	Open in IMG/M
3300004807\|Ga0007809_10139358	Not Available	721	Open in IMG/M
3300004807\|Ga0007809_10168446	Not Available	641	Open in IMG/M
3300006071\|Ga0007876_1040238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1279	Open in IMG/M
3300006071\|Ga0007876_1186341	Not Available	506	Open in IMG/M
3300006072\|Ga0007881_1021707	Not Available	1785	Open in IMG/M
3300006100\|Ga0007806_1011783	Not Available	2008	Open in IMG/M
3300006100\|Ga0007806_1015265	Not Available	1691	Open in IMG/M
3300006101\|Ga0007810_1059465	Not Available	775	Open in IMG/M
3300006104\|Ga0007882_10193638	Not Available	695	Open in IMG/M
3300006107\|Ga0007836_1017220	Not Available	1578	Open in IMG/M
3300006112\|Ga0007857_1001075	Not Available	7632	Open in IMG/M
3300006113\|Ga0007858_1004655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	3532	Open in IMG/M
3300006116\|Ga0007807_1021562	Not Available	1419	Open in IMG/M
3300006116\|Ga0007807_1030672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1131	Open in IMG/M
3300006119\|Ga0007866_1071999	Not Available	642	Open in IMG/M
3300006127\|Ga0007805_1039127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1062	Open in IMG/M
3300006127\|Ga0007805_1137469	Not Available	521	Open in IMG/M
3300020685\|Ga0214256_103683	Not Available	1522	Open in IMG/M
3300020685\|Ga0214256_107743	Not Available	931	Open in IMG/M
3300020685\|Ga0214256_115150	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	635	Open in IMG/M
3300020710\|Ga0214198_1005884	Not Available	1687	Open in IMG/M
3300020712\|Ga0214255_1001387	Not Available	4546	Open in IMG/M
3300020716\|Ga0214207_1003521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2748	Open in IMG/M
3300020716\|Ga0214207_1005861	Not Available	1878	Open in IMG/M
3300020717\|Ga0214248_1037131	Not Available	606	Open in IMG/M
3300020727\|Ga0214246_1001266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium	6167	Open in IMG/M
3300020732\|Ga0214201_1030328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	892	Open in IMG/M
3300021115\|Ga0214174_100528	Not Available	3864	Open in IMG/M
3300021131\|Ga0214206_1003238	Not Available	3146	Open in IMG/M
3300021131\|Ga0214206_1005840	Not Available	2045	Open in IMG/M
3300021131\|Ga0214206_1008170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium	1586	Open in IMG/M
3300021136\|Ga0214167_1040977	Not Available	993	Open in IMG/M
3300021137\|Ga0214165_1026022	Not Available	1441	Open in IMG/M
3300021138\|Ga0214164_1030705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1351	Open in IMG/M
3300021139\|Ga0214166_1002482	Not Available	7194	Open in IMG/M
3300021139\|Ga0214166_1041158	Not Available	1044	Open in IMG/M
3300025357\|Ga0208383_1000027	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	36473	Open in IMG/M
3300025357\|Ga0208383_1003987	Not Available	2052	Open in IMG/M
3300025357\|Ga0208383_1018247	Not Available	843	Open in IMG/M
3300025358\|Ga0208504_1000442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10400	Open in IMG/M
3300025358\|Ga0208504_1002474	All Organisms → cellular organisms → Bacteria	3301	Open in IMG/M
3300025358\|Ga0208504_1014835	Not Available	1090	Open in IMG/M
3300025358\|Ga0208504_1026490	Not Available	756	Open in IMG/M
3300025369\|Ga0208382_1022158	Not Available	847	Open in IMG/M
3300025372\|Ga0207957_1006395	Not Available	1796	Open in IMG/M
3300025372\|Ga0207957_1012148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1156	Open in IMG/M
3300025379\|Ga0208738_1020291	Not Available	1062	Open in IMG/M
3300025379\|Ga0208738_1030750	Not Available	819	Open in IMG/M
3300025379\|Ga0208738_1045824	Not Available	636	Open in IMG/M
3300025383\|Ga0208250_1016065	All Organisms → Viruses → Predicted Viral	1316	Open in IMG/M
3300025383\|Ga0208250_1031264	Not Available	838	Open in IMG/M
3300025389\|Ga0208257_1010282	Not Available	1574	Open in IMG/M
3300025391\|Ga0208740_1000694	Not Available	8573	Open in IMG/M
3300025391\|Ga0208740_1012544	All Organisms → Viruses → Predicted Viral	1366	Open in IMG/M
3300025392\|Ga0208380_1020291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1100	Open in IMG/M
3300025407\|Ga0208378_1000992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8497	Open in IMG/M
3300025407\|Ga0208378_1006481	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2642	Open in IMG/M
3300025417\|Ga0208616_1000248	All Organisms → cellular organisms → Bacteria	17165	Open in IMG/M
3300025417\|Ga0208616_1006058	All Organisms → Viruses → Predicted Viral	2107	Open in IMG/M
3300025418\|Ga0208253_1004094	All Organisms → cellular organisms → Bacteria	4049	Open in IMG/M
3300025426\|Ga0208739_1011389	Not Available	1694	Open in IMG/M
3300025429\|Ga0208500_1033764	Not Available	624	Open in IMG/M
3300025450\|Ga0208744_1028610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1161	Open in IMG/M
3300025467\|Ga0208260_1036793	All Organisms → Viruses → Predicted Viral	1039	Open in IMG/M
3300025598\|Ga0208379_1102010	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	684	Open in IMG/M
3300025723\|Ga0208741_10002748	Not Available	6044	Open in IMG/M
3300025782\|Ga0208867_1024542	Not Available	904	Open in IMG/M
3300025783\|Ga0208258_1009016	All Organisms → Viruses → Predicted Viral	1632	Open in IMG/M
3300025785\|Ga0208498_1020992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1110	Open in IMG/M
3300027896\|Ga0209777_10285170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1283	Open in IMG/M
3300027896\|Ga0209777_10545212	Not Available	848	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	66.67%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	17.65%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	12.75%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.94%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	63.73%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	17.65%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	12.75%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	2.94%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000162	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003820	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07	Environmental	Open in IMG/M
3300004686	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006100	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09	Environmental	Open in IMG/M
3300006101	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09	Environmental	Open in IMG/M
3300006104	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1	Environmental	Open in IMG/M
3300006107	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Oct07	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006113	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Aug08	Environmental	Open in IMG/M
3300006116	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300020685	Freshwater microbial communities from Trout Bog Lake, WI - 11AUG2009 hypolimnion	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020712	Freshwater microbial communities from Trout Bog Lake, WI - 03AUG2009 hypolimnion	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020717	Freshwater microbial communities from Trout Bog Lake, WI - 15JUN2009 hypolimnion	Environmental	Open in IMG/M
3300020727	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 hypolimnion	Environmental	Open in IMG/M
3300020732	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 epilimnion	Environmental	Open in IMG/M
3300021115	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021136	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 hypolimnion	Environmental	Open in IMG/M
3300021137	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021138	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021139	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025391	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025392	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025407	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025417	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025418	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025426	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025429	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025450	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025467	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025723	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025782	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025785	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009H_0078322	3300000162	Freshwater	MELPIDEVLKELREIIGTQAQEIALLKATLTALKTPQPYTTAVTDKPDVVGTQGIKP*
TB03JUN2009H_0231922	3300000162	Freshwater	MDLPIDEVLKEMRDTIGLQAQEIALLKATITALKTPPTTTTAVTDKPN
TB03JUN2009E_0008948	3300000176	Freshwater	MELPIDEVLKEMRATIGLQAQEIAVLKATLTALQNPPAPTYTTAVTDKPDVVGTQGIKP*
TB03JUN2009E_0011957	3300000176	Freshwater	MELPIDEVLKEMRATIGLQAQEIALLKATLTALQNPPAPTYTTAVTDKPDVVGTQGIKP*
TB18AUG2009E_0003995	3300000203	Freshwater	MELPIDEVLKEMRATIGLQAQEIAVLKATLTALQNPPTPTYTTAVTDKPDVVGTQGIKP*
TB18AUG2009E_0072782	3300000203	Freshwater	MELPIDEVLKEMRDTIGMQAQEIALLKATITALKTPKPYTTAVTDKPDV
TB18AUG2009E_0138234	3300000203	Freshwater	KEMRATIGLQAQEIAVLKATLTALQNPPAPTYTTAVTDKPDVVGTQGIKP*
TB18AUG2009E_0376492	3300000203	Freshwater	MELPIDEVLKEMRETIGMQAQEIALLKATLTAIKNPPAPTFTTAVTDKPDVVGTQGIKP*
TBL_comb48_EPIDRAFT_10490122	3300000439	Freshwater	MELPIDEVLKEMRDTIGMQAQEIALLKATITALKTPKPYTTAVTDKPDVVG
JGI24028J26656_10018502	3300002091	Lentic	MELPVDEVLKEMRNIIGVQAQEIALLKATLTTLENPPAPTYTTAVTDKPDVVGTQGIKP*
JGI24218J26658_10088832	3300002092	Lentic	MELPIEEVLKEMRETIGMQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP*
JGI24890J29729_10763452	3300002307	Lentic	MELPIDGVLKEMRDIIGVQAQEIALLKATITALKTPSTYTTAVTDKPDVVGTQGIKP*
G310J44882_100060351	3300002933	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALKTPPTTTTAVTDKPDVVGTQGIKP*
G310J44882_100380812	3300002933	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALKTPPTPTYTTAVTDKPDVVGTQGIKP*
G310J44882_100628332	3300002933	Freshwater	MELPIDEVLKEMRDTIGMQAQEIALLKATITALKTPKPYTTAVTDKPDVVGTQGIKP*
Ga0007850_10001408	3300003783	Freshwater	MELPIDEVLKEMRETIGIQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP*
Ga0007850_10037932	3300003783	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALQTPQPYTTAVTDKPNVVGTQGIKP*
Ga0007850_10179712	3300003783	Freshwater	MELPIDAVLKEMRETIGIQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQ
Ga0007811_10083492	3300003787	Freshwater	MELPIDEVLKEMRATIGLQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP*
Ga0007846_10220001	3300003797	Freshwater	MELPIEEVLKEMRETIGVQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP*
Ga0007842_10001975	3300003798	Freshwater	MELPIDGVLKEMRDIIGVQAQEIALLKATLTALQNPPAPTYTTAVTDKPDVIGTQGIKP*
Ga0007842_10084842	3300003798	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALQTPQPYTTAVTDKPNVVGTQGIKP
Ga0007864_10005294	3300003806	Freshwater	MDLPIDEVLKEMRDTIGLQAQEIALLKATITAIKTPPTTTTAVTDKPNVVGTQGIKP*
Ga0007864_10005585	3300003806	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALKTPPTTTTAVTDKPNVVGTQGIKP*
Ga0007879_10013345	3300003813	Freshwater	MELPIDDVLKEMRETIGIQAQEIAVLKATLTALQKPPAPTYTTAVTDKPDVVGTQGIKP*
Ga0007863_10196401	3300003820	Freshwater	MDLPIEEVLKEMRETIGMQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP*
Ga0007863_10204201	3300003820	Freshwater	VLKEMRETIGIQAQEIALLKATITALKTPQPYTTAVTDKPNVVGTQGIKP*
Ga0065173_10936101	3300004686	Freshwater	SLNQVRRQIMELPIDEVLKEMRETIGIQAQEIALLKATITALKIPQPYTTAVTDKPNVVGTQGIKP*
Ga0065173_11025912	3300004686	Freshwater	MELPIDEILKEMRETIGMQAQEIALLKATITALKTPQPYTTAVTDKPDVVG
Ga0065171_10223261	3300004692	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALKTLQPYTTAVNDKPDVVGTQGIKP*
Ga0065171_10485762	3300004692	Freshwater	MELPIEEVLKEMRETIGVQAQEIALLKATITALKTPQPYTTAVTDKPDVTGTQGIKP*
Ga0007809_101393582	3300004807	Freshwater	MELPIDEILKEMRETIGMQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP*
Ga0007809_101684462	3300004807	Freshwater	MELPIDEVLKEMRETIGIQAQEIALLKATITALKTPPTTTTAVTDKPDVVGTQGIKP*
Ga0007876_10402381	3300006071	Freshwater	QVRRQIMELPIDEVLKEMRATIGLQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP*
Ga0007876_11863411	3300006071	Freshwater	MELPIDGLLKELREIIGTQAQEIALLKATITALQTPQPYTTAVTDKPDVVGTQGIKP*
Ga0007881_10217072	3300006072	Freshwater	MELPIDEVLKEMRETIGIQAQEIALLKATITALKTPPTTTTAVTDKPNVVGTQGIKP*
Ga0007806_10117832	3300006100	Freshwater	MELPIDGLLKELREIIGTQAQEIALLKATITVLQTPQPYTTAVTDKPDVVGTQGIKP*
Ga0007806_10152651	3300006100	Freshwater	MELPIDAVLKEMRETIGIQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP*
Ga0007810_10594651	3300006101	Freshwater	LPIDGLLKELREIIGTQAQEIALLKATITALQTPQPYTTAVTDKPDVVGTQGIKP*
Ga0007882_101936381	3300006104	Freshwater	MELPIDGLLKELREIIGTQAQEIALLKATITALQTPQPYTTAVTDK
Ga0007836_10172202	3300006107	Freshwater	MELPIDGLLKELREIIGTQAQEIALLKATITALQTTQPYTTAVTDKPDVVGTQGIKP*
Ga0007857_10010758	3300006112	Freshwater	MELPIDEVLKEMRETIGIQAQEIALLKATITALKIPQPYTTAVTDKPNVVGTQGIKP*
Ga0007858_10046555	3300006113	Freshwater	MELPIDEVLKEMRETIGIQAQEIALLKATITALKTPQPYTTAVTDK
Ga0007807_10215622	3300006116	Freshwater	MELPIDEVLKEMRATIGLQAQEIALLKATITALKTPQPYTTAVTDK
Ga0007807_10306721	3300006116	Freshwater	EVLKEMRATIGLQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP*
Ga0007866_10719991	3300006119	Freshwater	MELPIDDVLKEMRETIGIQAQEIAVLKATLTALQKPPAPTYTTAVTD
Ga0007805_10391271	3300006127	Freshwater	EVLKEMRETIGIQAQEIALLKATITALKTPPTTTTAVTDKPNVVGTQGIKP*
Ga0007805_11374691	3300006127	Freshwater	IDEVLKEMRATIGLQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP*
Ga0214256_1036832	3300020685	Freshwater	MELPIDEVLKEMRDTIGMQAQEIALLKATITALKTPKPYTTAVTDKPDVVGTQGIKP
Ga0214256_1077431	3300020685	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALKTPPTPTYTTAVTDKPDVVGTQGIKP
Ga0214256_1151502	3300020685	Freshwater	MELPIDEVLKELREIIGTQAQEIALLKATLTALKTPQPYTTAVTDKPDV
Ga0214198_10058842	3300020710	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALKTPPTTTTAVTDKPDVVGTQGIKP
Ga0214255_10013875	3300020712	Freshwater	MELPIDEVLKELREIIGTQAQEIALLKATLTALKTPQPYTTAVTDKPDVVGTQGIKP
Ga0214207_10035212	3300020716	Freshwater	MELPIDEVLKEMRATIGLQAQEIAVLKATLTALQNPPAPTYTTAVTDKPDVVGTQGIKP
Ga0214207_10058611	3300020716	Freshwater	MELPIDEVLKEMRETIGMQAQEIALLKATLTAIKNPPAPTFTTAVTDKPDVVGTQGIKP
Ga0214248_10371311	3300020717	Freshwater	MELPIDEVLKEMRDTIGMQAQEIALLKATITALKTPKPYTTAVTDKPDVVGTQGIK
Ga0214246_10012665	3300020727	Freshwater	MELPIDEVLKEMRATIGLQAQEIALLKATLTALQNPPAPTYTTAVTDKPDVVGTQGIKP
Ga0214201_10303283	3300020732	Freshwater	PIDEVLKEMRATIGLQAQEIALLKATLTALQNPPAPTYTTAVTDKPDVVGTQGIKP
Ga0214174_1005281	3300021115	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALKTPPTTTTAVTDKPDVVG
Ga0214206_10032382	3300021131	Freshwater	MELPIDEVLKEMRDTIGIQAQEIAVLKATLTALQTPQSYTTAVTDKPNVVGTQGIKP
Ga0214206_10058402	3300021131	Freshwater	MELPIDGVLKEMREIIGAQAQEIALLKATLTALENPQPYTTAVTDKPDVIGTQGIKP
Ga0214206_10081701	3300021131	Freshwater	MELPIDGVLKEMREIIGAQAQEIALLKATLTALQNPQPYTTAVTDKPDVLGTQGIKP
Ga0214167_10409771	3300021136	Freshwater	MDLPIDEVLKEMRDTIGLQAQEIALLKATITALKTPPTTTTAVTDKPNVVG
Ga0214165_10260222	3300021137	Freshwater	MELPIDEVLKEMRATIGLQAQEIAVLKATLTALQNPPAPTYTTAVTDKPDVVGTQ
Ga0214164_10307051	3300021138	Freshwater	IDEVLKEMRATIGLQAQEIAVLKATLTALQNPPAPTYTTAVTDKPDVVGTQGIKP
Ga0214166_10024829	3300021139	Freshwater	MELPIDEVLKEMRATIGLQAQEIAVLKATLTALQNPPTPTYTTAVTDKPDVVGTQGIKP
Ga0214166_10411581	3300021139	Freshwater	MELPIDEVLKEMRETIGIQAQEIAVLKATLTALQKPPAPTYTTAVTDKPDVVGTQGIKP
Ga0208383_100002721	3300025357	Freshwater	MELPIDGVLKEMRDIIGVQAQEIALLKATLTALQNPPAPTYTTAVTDKPDVIGTQGIKP
Ga0208383_10039873	3300025357	Freshwater	MELPIDEVLKEMRETIGIQAQEIALLKATITALKTPQPYTTAVTDKPNVVGTQGIKP
Ga0208383_10182471	3300025357	Freshwater	MELPIDGLLKELREIIGTQAQEIALLKATITVLQTPQPYTTAVTDKPDVVGTQGIKP
Ga0208504_100044214	3300025358	Freshwater	MELPIDEVLKEMRETIGIQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP
Ga0208504_10024745	3300025358	Freshwater	MELPIDAVLKEMRETIGIQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP
Ga0208504_10148352	3300025358	Freshwater	MELPIDEVLKEMRATIGLQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP
Ga0208504_10264902	3300025358	Freshwater	MDLPIEEVLKEMRETIGMQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP
Ga0208382_10221581	3300025369	Freshwater	ELPIDEVLKEMRETIGIQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP
Ga0207957_10063954	3300025372	Freshwater	MELPIDGLLKELREIIGTQAQEIALLKATITALQTPQPYTTAVTDKPDVVGTQGIKP
Ga0207957_10121481	3300025372	Freshwater	NQVRRQIMELPIDEVLKEMRETIGNQAQEIALLKATITALKTLQPYTTAVNDKPDVVGTQGIKP
Ga0208738_10202911	3300025379	Freshwater	MELPIEEVLKEMRETIGVQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP
Ga0208738_10307501	3300025379	Freshwater	MELPIDEVLKEMRETIGIQAQEIALLKATITALKTPPTTTTAVTDKPNVVGTQGIKP
Ga0208738_10458242	3300025379	Freshwater	MELPIDGLLKELREIIGTQAQEIALLKATITALQTPQPYTTAVTDKPDVVGTQG
Ga0208250_10160654	3300025383	Freshwater	MELPIEEVLKEMRETIGVQAQEIALLKATITALKTPQPYTTAVTDKPDVTGTQGIKP
Ga0208250_10312642	3300025383	Freshwater	MELPIDEILKEMRETIGMQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP
Ga0208257_10102824	3300025389	Freshwater	MELPIDEVLKEMRETIGIQAQEIALLKATITALKIPQPYTTAVTDKPNVVGTQGIKP
Ga0208740_100069411	3300025391	Freshwater	MELPIDDVLKEMRETIGIQAQEIAVLKATLTALQKPPAPTYTTAVTDKPDVVGTQGIKP
Ga0208740_10125441	3300025391	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALKTPPTPTYTTAVTDKPDVV
Ga0208380_10202912	3300025392	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALKTLQPYTTAVNDKPDVVGTQGIKP
Ga0208378_10009923	3300025407	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP
Ga0208378_10064811	3300025407	Freshwater	LPIDEVLKEMRETIGIQAQEIALLKATITALKTPPTTTTAVTDKPNVVGTQGIKP
Ga0208616_10002482	3300025417	Freshwater	MDLPIDEVLKEMRDTIGLQAQEIALLKATITAIKTPPTTTTAVTDKPNVVGTQGIKP
Ga0208616_10060585	3300025417	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALKTPPTTTTAVTDKPNVVGTQGIKP
Ga0208253_10040942	3300025418	Freshwater	MELPIDEVLKEMRATIGLQAQEIALLKATITALKTPQPYTTAVTDKPNVVGTQGIKP
Ga0208739_10113892	3300025426	Freshwater	MELPIDEVLKEMRETIGIQAQEIALLKATITALKTPPTTTTAVTDKPDVVGTQGIKP
Ga0208500_10337642	3300025429	Freshwater	MELPIDGVLKEMRDIIGVQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP
Ga0208744_10286101	3300025450	Freshwater	KEMRATIGLQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP
Ga0208260_10367931	3300025467	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALQTPQPYTTAVTDKPN
Ga0208379_11020101	3300025598	Freshwater	MELPIDEVLKEMRATIGLQAQEIALLKATLTALQNPPAPTYTTAVTDKPDV
Ga0208741_100027481	3300025723	Freshwater	MELPIDEVLKEMRETIGNQAQEIALLKATITALKTPPTPTYTTAVTDKPDVVGT
Ga0208867_10245422	3300025782	Freshwater	MELPIDEVLKEMRATIGLQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQ
Ga0208258_10090161	3300025783	Freshwater	ELPIDEVLKEMRETIGNQAQEIALLKATITALKTPPTPTYTTAVTDKPDVVGTQGIKP
Ga0208498_10209923	3300025785	Freshwater	EVLKEMRATIGLQAQEIALLKATITALKTPQPYTTAVTDKPDVVGTQGIKP
Ga0209777_102851703	3300027896	Freshwater Lake Sediment	MELPIDEVLKEMRATIGLQAQEIAVLKATLTALQKPPAPTYTTAVTDKPDVVGTQGIKP
Ga0209777_105452121	3300027896	Freshwater Lake Sediment	MELPIDEVLKEMRATIGLQAQEIAVLKATLTALQNPPAPTFTTAVTD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102001

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences