Metagenome / Metatranscriptome Family F101949

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101949
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	38 residues
Representative Sequence	PVAPVVETVAVEVIEQPAPGVITVTEVEETEVRKAS
Number of Associated Samples	70
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.12 %
% of genes near scaffold ends (potentially truncated)	91.18 %
% of genes from short scaffolds (< 2000 bps)	86.27 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.824 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (54.902 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.863 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00656	Peptidase_C14	2.94
PF01523	PmbA_TldD	1.96
PF01161	PBP	1.96
PF00239	Resolvase	1.96
PF13185	GAF_2	0.98
PF02769	AIRS_C	0.98
PF08734	GYD	0.98
PF07508	Recombinase	0.98
PF13340	DUF4096	0.98
PF03330	DPBB_1	0.98
PF02012	BNR	0.98
PF16861	Carbam_trans_C	0.98
PF02518	HATPase_c	0.98
PF01381	HTH_3	0.98
PF02979	NHase_alpha	0.98
PF13581	HATPase_c_2	0.98
PF00589	Phage_integrase	0.98
PF13975	gag-asp_proteas	0.98
PF13515	FUSC_2	0.98
PF04226	Transgly_assoc	0.98
PF13410	GST_C_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.94
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	2.94
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	1.96
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	1.96
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.96
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.98
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
All Organisms	root	All Organisms	41.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
cellular organisms	root	All Organisms → cellular organisms	40.20 %
Viruses	superkingdom	All Organisms → Viruses	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.45 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.51 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.75 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.94 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.80 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.94 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	1.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	2.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.94 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	1.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100310952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2221	Open in IMG/M
3300005764\|Ga0066903_106611887	Not Available	603	Open in IMG/M
3300005764\|Ga0066903_107578097	Not Available	559	Open in IMG/M
3300006102\|Ga0075015_100239368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	980	Open in IMG/M
3300006102\|Ga0075015_100830004	Not Available	557	Open in IMG/M
3300006163\|Ga0070715_10553245	Not Available	667	Open in IMG/M
3300006172\|Ga0075018_10206023	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300010359\|Ga0126376_10145251	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300010360\|Ga0126372_10858583	Not Available	906	Open in IMG/M
3300010361\|Ga0126378_10298278	All Organisms → cellular organisms → Bacteria → Proteobacteria	1714	Open in IMG/M
3300010361\|Ga0126378_10964308	Not Available	957	Open in IMG/M
3300010361\|Ga0126378_11508901	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300010362\|Ga0126377_10934949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	931	Open in IMG/M
3300010366\|Ga0126379_11054061	Not Available	918	Open in IMG/M
3300010366\|Ga0126379_13079498	Not Available	558	Open in IMG/M
3300010376\|Ga0126381_100519578	Not Available	1682	Open in IMG/M
3300010376\|Ga0126381_101332501	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300010376\|Ga0126381_103905009	Not Available	581	Open in IMG/M
3300010376\|Ga0126381_104033005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300010398\|Ga0126383_10532269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1238	Open in IMG/M
3300010398\|Ga0126383_12646121	Not Available	585	Open in IMG/M
3300012201\|Ga0137365_10459689	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300012917\|Ga0137395_10970544	Not Available	611	Open in IMG/M
3300012971\|Ga0126369_10611739	Not Available	1160	Open in IMG/M
3300012971\|Ga0126369_11174584	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	857	Open in IMG/M
3300014056\|Ga0120125_1048280	Not Available	933	Open in IMG/M
3300016294\|Ga0182041_10103988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2093	Open in IMG/M
3300016294\|Ga0182041_10381256	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300016294\|Ga0182041_11108074	Not Available	719	Open in IMG/M
3300016319\|Ga0182033_10815091	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300016319\|Ga0182033_11772636	Not Available	560	Open in IMG/M
3300016319\|Ga0182033_11810823	Not Available	554	Open in IMG/M
3300016341\|Ga0182035_11139609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300016371\|Ga0182034_11077720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300016387\|Ga0182040_10552943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	926	Open in IMG/M
3300016387\|Ga0182040_10880208	Not Available	742	Open in IMG/M
3300016387\|Ga0182040_10927189	Not Available	723	Open in IMG/M
3300016445\|Ga0182038_12083053	Not Available	514	Open in IMG/M
3300017924\|Ga0187820_1233526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	585	Open in IMG/M
3300017994\|Ga0187822_10194402	Not Available	674	Open in IMG/M
3300018001\|Ga0187815_10054510	Not Available	1681	Open in IMG/M
3300018006\|Ga0187804_10538103	Not Available	527	Open in IMG/M
3300020581\|Ga0210399_10177315	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300021405\|Ga0210387_11439365	Not Available	592	Open in IMG/M
3300027090\|Ga0208604_1017916	Not Available	672	Open in IMG/M
3300027725\|Ga0209178_1331279	Not Available	566	Open in IMG/M
3300027874\|Ga0209465_10047311	Not Available	2053	Open in IMG/M
3300030730\|Ga0307482_1235918	Not Available	569	Open in IMG/M
3300031446\|Ga0170820_14263507	Not Available	643	Open in IMG/M
3300031469\|Ga0170819_13203796	Not Available	891	Open in IMG/M
3300031543\|Ga0318516_10622287	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300031572\|Ga0318515_10147509	Not Available	1253	Open in IMG/M
3300031640\|Ga0318555_10659598	Not Available	566	Open in IMG/M
3300031668\|Ga0318542_10539459	Not Available	607	Open in IMG/M
3300031679\|Ga0318561_10532008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300031708\|Ga0310686_101586467	Not Available	684	Open in IMG/M
3300031713\|Ga0318496_10189481	Not Available	1129	Open in IMG/M
3300031744\|Ga0306918_10418569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1045	Open in IMG/M
3300031748\|Ga0318492_10824282	Not Available	500	Open in IMG/M
3300031751\|Ga0318494_10944820	Not Available	506	Open in IMG/M
3300031754\|Ga0307475_10042188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3386	Open in IMG/M
3300031754\|Ga0307475_10925948	Not Available	687	Open in IMG/M
3300031764\|Ga0318535_10124831	Not Available	1139	Open in IMG/M
3300031792\|Ga0318529_10453155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	597	Open in IMG/M
3300031819\|Ga0318568_10990933	Not Available	519	Open in IMG/M
3300031879\|Ga0306919_10130028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1813	Open in IMG/M
3300031879\|Ga0306919_10388997	All Organisms → Viruses → Predicted Viral	1068	Open in IMG/M
3300031879\|Ga0306919_10948380	Not Available	659	Open in IMG/M
3300031897\|Ga0318520_10261681	Not Available	1035	Open in IMG/M
3300031910\|Ga0306923_10137474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2782	Open in IMG/M
3300031910\|Ga0306923_10195233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2313	Open in IMG/M
3300031910\|Ga0306923_10647610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	1181	Open in IMG/M
3300031910\|Ga0306923_11032958	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300031910\|Ga0306923_11618391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300031910\|Ga0306923_12222591	Not Available	549	Open in IMG/M
3300031912\|Ga0306921_10928805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	986	Open in IMG/M
3300031912\|Ga0306921_11322000	Not Available	796	Open in IMG/M
3300031941\|Ga0310912_11505888	Not Available	506	Open in IMG/M
3300031945\|Ga0310913_11022261	Not Available	579	Open in IMG/M
3300031954\|Ga0306926_11391321	Not Available	815	Open in IMG/M
3300031954\|Ga0306926_11909869	Not Available	670	Open in IMG/M
3300031959\|Ga0318530_10412618	Not Available	560	Open in IMG/M
3300031962\|Ga0307479_10282700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1640	Open in IMG/M
3300032025\|Ga0318507_10346472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	647	Open in IMG/M
3300032035\|Ga0310911_10189554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	1167	Open in IMG/M
3300032052\|Ga0318506_10398340	Not Available	610	Open in IMG/M
3300032059\|Ga0318533_10149063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1654	Open in IMG/M
3300032059\|Ga0318533_10377825	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300032060\|Ga0318505_10421111	Not Available	631	Open in IMG/M
3300032094\|Ga0318540_10002583	All Organisms → cellular organisms → Bacteria → Proteobacteria	6257	Open in IMG/M
3300032180\|Ga0307471_103014899	Not Available	597	Open in IMG/M
3300032205\|Ga0307472_100685832	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300032261\|Ga0306920_100020490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9210	Open in IMG/M
3300032261\|Ga0306920_104379470	Not Available	506	Open in IMG/M
3300033289\|Ga0310914_11735809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	528	Open in IMG/M
3300033290\|Ga0318519_10885498	Not Available	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.14%
Aquatic	Environmental → Aquatic	6.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.14%
Freshwater	Environmental → Aquatic → Freshwater	3.92%
Sediment	Environmental → Aquatic → Sediment	2.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.27%
Loam	Environmental → Terrestrial → Soil → Loam	6.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1003109521	3300005332	Tropical Forest Soil	PKVKQPVAPVVETVAAEVIEQPAPDVVTVTEVEATRQVS*
Ga0066903_1037479962	3300005764	Tropical Forest Soil	KAARKVKQPATPVIETVAVEVIEQPAPGVIAVTEVEETEIRKAS*
Ga0066903_1066118872	3300005764	Tropical Forest Soil	PVAPAVETVAAEVIEQPAPVIAVTEVEETEIRKAS*
Ga0066903_1075780972	3300005764	Tropical Forest Soil	KMKQPVAQVVETAAVEVVEQPAPGVITVTEVEEAEVRKAS*
Ga0075015_1002393683	3300006102	Watersheds	MKQPVAPAVDTVAVEVIEQSASGVITVTEVEETEVRQAS*
Ga0075015_1008300041	3300006102	Watersheds	PVTPVVETVAVEVIEQPAPGVITVTEIEETRKAS*
Ga0070715_105532451	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	KQPIAPVVETVAVEVIEQPAPGVITVTEVEETEIRKAS*
Ga0075018_102060231	3300006172	Watersheds	KVARKVRQPVAPVVEIVAAEVIEQPAPNVITVTEVEETRKAS*
Ga0126376_101452512	3300010359	Tropical Forest Soil	MKKAARPVAPAVETVAVEVIEQPAPDVITVTEVEETELRQAS*
Ga0126372_108585831	3300010360	Tropical Forest Soil	KVKQPIAPVVETVASEVIEHPATGVITEVGETEIRKAS*
Ga0126378_102982783	3300010361	Tropical Forest Soil	AQTRADEKAALPVAPSETVAVEVIEQPAPGVIAVTEVEETELRQAS*
Ga0126378_109643081	3300010361	Tropical Forest Soil	PVAQVVETAAVEVVEQPAPGVITVTEVEEAEVRKAS*
Ga0126378_115089012	3300010361	Tropical Forest Soil	APVVETVAVGVIEQPAPGVISVTEVEETEIRKAS*
Ga0126377_109349491	3300010362	Tropical Forest Soil	APVAPVVETVAVEVIEQPAPDVITVTEVEETEIRKAS*
Ga0126379_110540613	3300010366	Tropical Forest Soil	PVAPVVETVAVEVIGQPAPDVITVTEVEETEVRKAS*
Ga0126379_130794981	3300010366	Tropical Forest Soil	KPPAAPAIETAAVEVTELPAPGVITVSEVEETEVRKAS*
Ga0126381_1005195781	3300010376	Tropical Forest Soil	IEQPVVTAVETVAVEVIERPAPDVITVTEVEETRKAS*
Ga0126381_1013325011	3300010376	Tropical Forest Soil	PVAPAVETVAVEVIEQPAPGVITVTEVEETEVRQVS*
Ga0126381_1039050091	3300010376	Tropical Forest Soil	PVTPVIEIAAVEVIAKPAPDVITVTEVEANEVRKAS*
Ga0126381_1040330052	3300010376	Tropical Forest Soil	ARPVAPVVETVAVEVIEQPAPGVITVMEVEETEVRQAS*
Ga0126383_105322694	3300010398	Tropical Forest Soil	KVKRPVAPVVETVAVEVIGQPAPDVITVTEVGEAEVRKAS*
Ga0126383_126461211	3300010398	Tropical Forest Soil	QPVAPAVETVAAEVIEQPAPGVITVTEVEETEIRKAS*
Ga0137365_104596891	3300012201	Vadose Zone Soil	KAARKVKQAVTPVVETVAVEVLEQPAPTVTEVEETRKAS*
Ga0137395_109705441	3300012917	Vadose Zone Soil	KVKQAVTPVVETVAVDVIEQPAPTVTEVEETRKAS*
Ga0126369_106117391	3300012971	Tropical Forest Soil	KVKPPAAPAIETVAVEVIEQPAPVITVTEVEEAEIRKAS*
Ga0126369_111745841	3300012971	Tropical Forest Soil	PVKKAARPVAPVVGTVAVEVIEQPAPGVITVTEVEETEVR*
Ga0120125_10482802	3300014056	Permafrost	VKQPTAPVVETVAVEVIEQPVAVMEVEETLVREVSPDDPQ*
Ga0182036_109554322	3300016270	Soil	ARKVKRPVAPVGEIVAAEVMEQAAPGQITVTEIEETEVRKAS
Ga0182041_101039881	3300016294	Soil	RPVAPAVETVAVEVIEQPAPGVITVTEVEETEVRQAS
Ga0182041_103812561	3300016294	Soil	PVAPAVETVTVEVIEQPVPAVTATEVEETEIRQVS
Ga0182041_111080741	3300016294	Soil	ARPVAPAVETVAVEVIEQPAPGVITVTEVEETEVRQAS
Ga0182033_108150911	3300016319	Soil	IKQPIVAAVETVAVEVIEQPPPVIAVTEVEETEVRKAS
Ga0182033_117726361	3300016319	Soil	AARPVAPVVGTVAVEVIEQPAPGVITVAEVEETEVRQAS
Ga0182033_118108231	3300016319	Soil	RRIKQPVAPAVETVAAEVIEQPAPVIAVTGVEETEIRKAS
Ga0182035_111396091	3300016341	Soil	AARKVKQPVAPVVETVAVEVIEQPAPSVITVTEVEETRQVS
Ga0182034_110777201	3300016371	Soil	AARKVKEPVAPVVETVAVEVIEQPAPGVITVTEVEETEVRKAS
Ga0182040_105529431	3300016387	Soil	VKKAARPVAPVVGTVAVEVIEQPAPGVITVTEVEETEVRQAS
Ga0182040_108802081	3300016387	Soil	PIVAAVETVAVEVIEQPPPVIAVTEVEETEVRKAS
Ga0182040_109271891	3300016387	Soil	VKQPVAPVVLVETVAAEVTEQPAPGMITVTEIEETEVRKAS
Ga0182038_120830532	3300016445	Soil	KQPIAAVVETVAVEAIEQPAPGVITVTEVEETEVRRAG
Ga0187820_12335261	3300017924	Freshwater Sediment	TAPAVETVAVEVIEQPAPGVITVTEVEETELRKVS
Ga0187822_101944022	3300017994	Freshwater Sediment	VKQPVAPVIETVAVEAIKQPAPDVITVTEAGETEIRKAS
Ga0187815_100545101	3300018001	Freshwater Sediment	AARKVKQPAAPVVETVAVEMIEQPAPEVVEVTEVEKPEVRKAS
Ga0187804_105381032	3300018006	Freshwater Sediment	AAPTVETVAVEVIEHPAPGVITVTEVEETEVRQAS
Ga0210399_101773153	3300020581	Soil	AVRKVKQPVSSVVETVAVEVIEQPAPGVITVTEVEETRKAS
Ga0210387_114393651	3300021405	Soil	KPSAPSVETVVVDVIEQPAPNVITVTEVEETRKAS
Ga0208604_10179162	3300027090	Forest Soil	KQPAAPVVETVAAEAIEQPAPGVIAVTEVEETEVRKAS
Ga0209178_13312791	3300027725	Agricultural Soil	PVAPVVETVAVEVIEQPAPGVITVTEVEETEVRKAS
Ga0209465_100473113	3300027874	Tropical Forest Soil	AARRIEQPVVTAVETVAVEMIERPAPDAITVTEVEETRKAS
Ga0307482_12359181	3300030730	Hardwood Forest Soil	KVKQPVAPAVETVAVEVVEQPAPGVITVTEVEETRKAS
Ga0170820_142635072	3300031446	Forest Soil	KQPVTPVVETVAVEVLEQPASGVITVTEIEETRKAR
Ga0170819_132037963	3300031469	Forest Soil	CDLQPAAPVVETVAVEVIEQPAPGLITVTEVEETRQVS
Ga0318516_106222872	3300031543	Soil	PVKKAARPVAPVVGTVAVEVIEQPAPGVITVTEVEETEVRQAS
Ga0318515_101475093	3300031572	Soil	VKQPVTPVIETAAVEMIEQPAPDVITVTEVEETRQVS
Ga0318555_106595981	3300031640	Soil	KQPVAPVVESVAVEVIEQPAPGVITVTEVEETEIRKAS
Ga0318542_105394592	3300031668	Soil	VKQPVAPVVETVAAEVIEQPAPVTVSEVEEIRKAS
Ga0318561_105320081	3300031679	Soil	AARPVAPAVETVAVEVIEQPAPGVITVTEVEETDVRQAS
Ga0310686_1015864671	3300031708	Soil	MKQPPAVETVAVEVVEQPAPGVITVTEVEETELRK
Ga0310686_1199038551	3300031708	Soil	SLQQSKNVAVEVIEQPAPGVITVTEVEEAGVRQAS
Ga0318496_101894811	3300031713	Soil	KAARKVKQPIAPVVETVAVEVIEQLAPGVITVTEVEETRQVS
Ga0306918_104185691	3300031744	Soil	VKQPIAPVVETVATEVIEQPAPGIITVTEVEETEVRKAS
Ga0318492_108242822	3300031748	Soil	QPVTPVIETAAVEVIEQPAPDVITVTEVEETEVRKAS
Ga0318494_109448202	3300031751	Soil	KKVARKVRQPVTPVIETASVEMIEQPAPDVITVTEVEETRQVS
Ga0307475_100421882	3300031754	Hardwood Forest Soil	MKQPIAPVVETVAIEVIEQPAPGVITVTEVEETEVRQVN
Ga0307475_109259481	3300031754	Hardwood Forest Soil	RPAAPTVETAAVEVIEQPAPGVITVTEVEETEVRQAS
Ga0318535_101248314	3300031764	Soil	KTARKVKQPIAPVVETVAVEVIEQLAPGVIAVTEVEETRQVS
Ga0318529_104531552	3300031792	Soil	ERMKQPVAPILETVAAEVIEQPAPGVIAVTEIEETRQVS
Ga0318576_105923031	3300031796	Soil	VAPVVETVAAEVIEQPAPGQITVTEIEETEVRKAS
Ga0318568_109909331	3300031819	Soil	LPVAPSETVAVEVIEQPAPGVITVTEVEETELRQAS
Ga0306919_101300281	3300031879	Soil	RKERMKQPVTAVVETVAADVIEQPAPGVVAVTEVEETEVRKAS
Ga0306919_103889971	3300031879	Soil	KQPVTPVIETAAVEMIEQPAPDVITVTEVEETRQVS
Ga0306919_109483801	3300031879	Soil	PVTPVIETAAVEMIEQPAPDVITVTEVEKTEVRKAS
Ga0318520_102616811	3300031897	Soil	KTARKVKQPIAPVVEGVTAEVIEQSAPDVVTVTEVEAARQVS
Ga0306923_101374741	3300031910	Soil	KVKQPIAPVVETVAVEVIEQPAPGVITVTEVEETRQVS
Ga0306923_101952331	3300031910	Soil	AARPVAPAVETVAVEVIEQPAPGVITVTEVEETEVRQAS
Ga0306923_106476101	3300031910	Soil	AARPVAPVVETVAVEVIEQPAPGVITVTEVEETEVRQAS
Ga0306923_110329581	3300031910	Soil	QPIVAAVETVAVEVIEQPPPVIAVTEVEETEVRKAS
Ga0306923_116183912	3300031910	Soil	KAARPVAPAVETVAVEVIEQPAPGVITVTEVEETDVRQAS
Ga0306923_122225912	3300031910	Soil	PVAPVVETVAVEVIEQPAPGVITVTEVEETEVRQAS
Ga0306921_109288051	3300031912	Soil	ALCKSKQPVAPVVETVAAQVIEQPAPGVITVTEVAEISQVS
Ga0306921_113220001	3300031912	Soil	RMKQPVAPVVETVAVEVIEQPAPSVMTVTEAEQTRKAS
Ga0310912_115058881	3300031941	Soil	RPVAPVVETVAVEVIEQPAPGVITVTEVEETEVRQAS
Ga0310913_110222611	3300031945	Soil	GARKVKPPAAPAIETAAVEVIEQPAPGVITVTEVEETEVRKAS
Ga0306926_113913211	3300031954	Soil	VKQPATPVIETVAVEVIEQPVTVTEIEQAEIRKAS
Ga0306926_119098691	3300031954	Soil	QPAAPAVETVAAEVIEQPAPVIAVTEVEETEIRKAS
Ga0318530_104126182	3300031959	Soil	KKATRKERMKQHVAPVVEIVATEVIEQPAANVITVTEVEETRKAS
Ga0307479_102827001	3300031962	Hardwood Forest Soil	SVKKATRPVAPAVETVAVEVIEQPAPGVITVTEVVDETQVRQAS
Ga0318507_103464722	3300032025	Soil	PVKKAARPVAPVVETVAVEVIEQPAPGVITVTEVEETEVRQAS
Ga0310911_101895543	3300032035	Soil	ARKERMKQPVAPILETVAAEVIEQPAPGVIAVTEIEETRQVS
Ga0318506_103983401	3300032052	Soil	VKQPVAPVVESVAVEVIEQPAPGVITVTEVEETEIRKAS
Ga0318533_101490631	3300032059	Soil	VAPAVETVAVEVIEQPAPGVITVTEVEETEVRQAS
Ga0318533_103778251	3300032059	Soil	RKVKQPVTPVIETAAVEMIEQPAPDVITVTEVEETRQVS
Ga0318505_104211112	3300032060	Soil	VAPVVETVVVEVVEQPAPGVTTVTEVEETEIRKAS
Ga0318505_104285321	3300032060	Soil	KKAAPPVAPAVETAAVEVIEQPAPGVTTVTEVEETRQVT
Ga0318540_100025839	3300032094	Soil	KKAALKVKQPIAPVVETVAVEVIEQPAPGVITVTEVEETRQVS
Ga0307471_1030148992	3300032180	Hardwood Forest Soil	KVKQPVAPVVETTVAEVIEQPAPDVISVTEVEETDVRKAS
Ga0307472_1006858322	3300032205	Hardwood Forest Soil	KVARKVKQAVTPVVETVAVEVIEQPAPGVITVTEIEETRKAS
Ga0306920_1000204901	3300032261	Soil	KQPVAPVVETVAAEVIEQPAPDVVTVTEVEATRQVS
Ga0306920_1000909961	3300032261	Soil	KQPVAPVVETVAAEVIEQPAPGVVTVTEAEETHQAS
Ga0306920_1043794702	3300032261	Soil	VKKVARPVAPAVETVAVEVIEQPAPGVMTVTEVEETEVRQAS
Ga0310914_117358091	3300033289	Soil	AARKERMKQPVAPILETVAAEVIEQPAPGVIAVTEIEETRQVS
Ga0318519_108854981	3300033290	Soil	KERMKQHVAPVVEIVATEVIEQPAANVITVTEVEETRKAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101949

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences