Metagenome Family F101935

Basic Information
Family ID	F101935
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	49 residues
Representative Sequence	MGLFRFAPATRREPSTDALIRIFQSEAAEIREDPEPARLRLTLHALAGLF
Number of Associated Samples	87
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.35 %
% of genes near scaffold ends (potentially truncated)	99.02 %
% of genes from short scaffolds (< 2000 bps)	93.14 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (83.333 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.118 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 1JGIcombinedJ26739_1017498961 2JGI26346J50198_10305521 3JGIcombinedJ51221_102805822 4Ga0062388_1003704943 5Ga0066388_1054960811 6Ga0070711_1002609912 7Ga0070700_1019712211 8Ga0066694_104859862 9Ga0066702_109666131 10Ga0066903_1019726982 11Ga0066903_1064062491 12Ga0070715_107402772 13Ga0079221_102817591 14Ga0075425_1026996051 15Ga0075423_124755031 16Ga0126373_130576541 17Ga0074046_103163591 18Ga0126370_107152591 19Ga0126370_125789082 20Ga0126372_114736782 21Ga0137376_113438272 22Ga0182036_107531912 23Ga0182033_100925271 24Ga0182035_117523612 25Ga0182032_109023642 26Ga0182040_101851862 27Ga0182037_103535991 28Ga0066667_103727791 29Ga0066662_117904131 30Ga0066669_105120041 31Ga0210403_107739852 32Ga0210403_108967822 33Ga0210403_109965222 34Ga0210399_108038351 35Ga0210401_106927581 36Ga0210400_115934391 37Ga0213876_105501712 38Ga0210394_116503082 39Ga0210402_101584812 40Ga0126371_122199301 41Ga0126371_126474391 42Ga0126371_127114082 43Ga0179589_104366431 44Ga0207663_112461342 45Ga0257146_10302701 46Ga0208369_10020932 47Ga0208603_10154972 48Ga0208097_10297012 49Ga0209625_10058731 50Ga0209656_102563041 51Ga0209380_108890811 52Ga0209488_104730131 53Ga0318516_106934442 54Ga0318541_105551922 55Ga0318538_101502492 56Ga0318538_103613741 57Ga0318528_103745222 58Ga0318515_103207091 59Ga0318542_103170822 60Ga0318561_106347601 61Ga0318574_109085972 62Ga0318560_100039816 63Ga0318496_104741852 64Ga0307469_111127952 65Ga0318500_101710752 66Ga0318501_101792471 67Ga0318501_107973091 68Ga0318502_108533992 69Ga0318492_107243182 70Ga0307477_106367012 71Ga0318554_106327971 72Ga0318526_102750601 73Ga0318521_109628432 74Ga0318546_108740902 75Ga0318547_107806322 76Ga0318529_101394651 77Ga0318550_103615953 78Ga0318568_100683552 79Ga0318568_105226491 80Ga0318567_103236602 81Ga0310917_108771562 82Ga0306925_106646672 83Ga0306925_119062201 84Ga0306921_120283791 85Ga0306921_125343322 86Ga0310913_104482381 87Ga0310910_110031743 88Ga0306922_101965602 89Ga0306922_103161702 90Ga0306922_115301202 91Ga0318532_100971501 92Ga0318506_100516992 93Ga0318570_103005262 94Ga0318553_101076292 95Ga0318525_104544812 96Ga0318577_103511781 97Ga0318540_102418012 98Ga0307471_1008399272 99Ga0307472_1007740261 100Ga0307472_1015920312 101Ga0306920_1002131543 102Ga0306920_1013428501
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 1JGIcombinedJ26739_1017498961 2JGI26346J50198_10305521 3Ga0062388_1003704943 4Ga0066388_1054960811 5Ga0070711_1002609912 6Ga0070700_1019712211 7Ga0066702_109666131 8Ga0066903_1019726982 9Ga0066903_1064062491 10Ga0070715_107402772 11Ga0079221_102817591 12Ga0075423_124755031 13Ga0074046_103163591 14Ga0126370_107152591 15Ga0126370_125789082 16Ga0137376_113438272 17Ga0182032_109023642 18Ga0182040_101851862 19Ga0182037_103535991 20Ga0210403_107739852 21Ga0210399_108038351 22Ga0213876_105501712 23Ga0126371_122199301 24Ga0126371_126474391 25Ga0126371_127114082 26Ga0209488_104730131 27Ga0318516_106934442 28Ga0307469_111127952 29Ga0318501_101792471 30Ga0318502_108533992 31Ga0318492_107243182 32Ga0307477_106367012 33Ga0318547_107806322 34Ga0318529_101394651
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50 1Ga0318553_101076292 2JGIcombinedJ26739_1017498961 3JGI26346J50198_10305521 4Ga0062388_1003704943 5Ga0066388_1054960811 6Ga0070711_1002609912 7Ga0066702_109666131 8Ga0066903_1064062491 9Ga0079221_102817591 10Ga0075425_1026996051 11Ga0074046_103163591 12Ga0126370_107152591 13Ga0137376_113438272 14Ga0182036_107531912 15Ga0182033_100925271 16Ga0182032_109023642 17Ga0182037_103535991 18Ga0066669_105120041 19Ga0210403_108967822 20Ga0210399_108038351 21Ga0210400_115934391 22Ga0126371_122199301 23Ga0126371_126474391 24Ga0207663_112461342 25Ga0257146_10302701 26Ga0209656_102563041 27Ga0209380_108890811 28Ga0209488_104730131 29Ga0318541_105551922 30Ga0318538_103613741 31Ga0318515_103207091 32Ga0318542_103170822 33Ga0318560_100039816 34Ga0318501_101792471 35Ga0318568_100683552 36Ga0318568_105226491 37Ga0306925_119062201
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.18% β-sheet: 0.00% Coil/Unstructured: 62.82%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00005	ABC_tran	82.35
PF00664	ABC_membrane	7.84
PF03412	Peptidase_C39	3.92
PF08238	Sel1	0.98
PF00486	Trans_reg_C	0.98

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	16.67 %
Unclassified	root	N/A	83.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	16.67 %
Unclassified	root	N/A	83.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.67 %
Unclassified	root	N/A	83.33 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.69 %
Unclassified	root	N/A	83.33 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.80 %
Unclassified	root	N/A	83.33 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.90 %
Unclassified	root	N/A	83.33 %

Name	Rank	Taxonomy	Distribution
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.98 %
Pleomorphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae	2.94 %
Unclassified	root	N/A	83.33 %

Name	Rank	Taxonomy	Distribution
Methyloferula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula	0.98 %
Pleomorphomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas	2.94 %
Unclassified	root	N/A	83.33 %

Name	Rank	Taxonomy	Distribution
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.98 %
Unclassified	root	N/A	83.33 %
unclassified Pleomorphomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → unclassified Pleomorphomonas	2.94 %

Name	Rank	Taxonomy	Distribution
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.98 %
Pleomorphomonas sp. COJ-58	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → unclassified Pleomorphomonas → Pleomorphomonas sp. COJ-58	2.94 %
Unclassified	root	N/A	83.33 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101749896	Not Available	521	Open in IMG/M
3300003351\|JGI26346J50198_1030552	Not Available	540	Open in IMG/M
3300003505\|JGIcombinedJ51221_10280582	Not Available	677	Open in IMG/M
3300004635\|Ga0062388_100370494	All Organisms → cellular organisms → Bacteria → Proteobacteria	1231	Open in IMG/M
3300005332\|Ga0066388_105496081	Not Available	642	Open in IMG/M
3300005439\|Ga0070711_100260991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	1363	Open in IMG/M
3300005441\|Ga0070700_101971221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	506	Open in IMG/M
3300005574\|Ga0066694_10485986	Not Available	576	Open in IMG/M
3300005575\|Ga0066702_10966613	Not Available	509	Open in IMG/M
3300005764\|Ga0066903_101972698	Not Available	1120	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.06%
Host-Associated	Host-Associated	2.94%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.94%
Plants	Host-Associated → Plants	2.94%
Terrestrial	Environmental → Terrestrial	94.12%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Roots	Host-Associated → Plants → Roots	0.98%
Soil	Environmental → Terrestrial → Soil	94.12%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	13.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.98%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.94%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.90%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.94%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M

Showing 1 to 10 of 87 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1017498961	3300002245	Forest Soil	MRLFRFAPALRRNPPPDALIRIFQSEVSEVREDPEPAQLRVTLHVLAGLLTA
JGI26346J50198_10305521	3300003351	Bog Forest Soil	MGLFRFAPATRREPSPDALIQIFQSETAEIREGSEPVQLRLTLHALAG
JGIcombinedJ51221_102805822	3300003505	Forest Soil	MRLFRFAPALRRNPPPDALIRVFQSEVSEVREDPEPAQLRVTLHVLAGLLAAL
Ga0062388_1003704943	3300004635	Bog Forest Soil	MQVSRFVPSLRPKPSTDRLIRLSQSESAEITEGPEPIELRLTL*
Ga0066388_1054960811	3300005332	Tropical Forest Soil	MRFFRFAAAPQRNPAPDALIRMFQSEVSEVREDAEPAQLR
Ga0070711_1002609912	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDLFPSVLQRRREPSSAALIRIFQSETAEVRENPEPFQLRLTLYALAGLVVALVAVSL
Ga0070700_1019712211	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MGLFRFAPAPRHSAPPEALIRVFQSETGEIREDPEPAQLRLTLYALVGLGTALLAVSLFMQL
Ga0066694_104859862	3300005574	Soil	MHLFRFAPALRRNPEPDALIRIFQSEVSEVREDPEPAQLRITLHVLA
Ga0066702_109666131	3300005575	Soil	MLWFRFAPALRRDPPHRTLIRIFQSEVGEVREDPEPAQLRL
Ga0066903_1019726982	3300005764	Tropical Forest Soil	MGWFRLAPMRHEQSSDPLIRVFQSETAEIRENPEPARLRLTLHLLAVL
Ga0066903_1064062491	3300005764	Tropical Forest Soil	MGLYRFALAPRREPSPEPLIRIFQSETAEIREGREPAQVRLTLYAVAGLFVSLLAVSTVM
Ga0070715_107402772	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MGLFRFAPAPRRNSSPETLIRIFQSETGEVRENPG
Ga0079221_102817591	3300006804	Agricultural Soil	MGLFRFALGPRRNPSPDALIRVFQSESAEVREDPEPGQVRLTLYALAGLF
Ga0075425_1026996051	3300006854	Populus Rhizosphere	MGLFRFAPAPRHSAPPEALIRVFQSETGEIREDPEPAQLRLTLYALVGLGT
Ga0075423_124755031	3300009162	Populus Rhizosphere	MGWFRFAPATPRESSADALIRVFQSETAEIREDPEPAQLRLTLPALAGLFVALL
Ga0126373_130576541	3300010048	Tropical Forest Soil	LYRFALAHRREPSLDPLIRIFQSEAAEIREGREPAQVRLTLYAVAGLFVSLLAVSIVMPMNR
Ga0074046_103163591	3300010339	Bog Forest Soil	MGLFRSAAALRREPSPDAVIRIFQSEAAEIREDPEPAQLRLTFYALAALFVAML
Ga0126370_107152591	3300010358	Tropical Forest Soil	VPRHSSAPDALIRIFQSEVGEVRENPEPAQLRLTLYAMCGL
Ga0126370_125789082	3300010358	Tropical Forest Soil	MGLFRFAPAPQRNPAPNALIRIFQSEVGEVREDPEPAQLRLTLYALAGLFVALLA
Ga0126372_114736782	3300010360	Tropical Forest Soil	MGLFRSAPQRQREPPSAALIRIFQSETAEIREDPEPFQLRLTLHALAGLVVALVAVSVLMQMN
Ga0137376_113438272	3300012208	Vadose Zone Soil	MGLFRCASASRDPSPDALIRVFQSETAEIREDSAPAQLRLTLYAFAGLLVSLLAVT
Ga0182036_107531912	3300016270	Soil	MGLYRFALAPRREPPTDPLIRIFQSETAEIREGREPAQLRLTLYAAAGLFVSLLAVSIVM
Ga0182033_100925271	3300016319	Soil	MGLFRFVPAPRREPSPDALIRVFQSETAEIREGPEPAQLRLTLYALAGLFAGLVA
Ga0182035_117523612	3300016341	Soil	MGLFRFVPAPRREPSTDALIRIFQSETAEIREDPEPARLRLTLHALAGLFAALLVVS
Ga0182032_109023642	3300016357	Soil	MGLFRFVAAVHEPSPDALIRIFQSETAQIREDSGPAQLRLTLHALAGLFVALLAVS
Ga0182040_101851862	3300016387	Soil	MGLFRFALGPRRNASPDALIRIFQSETSEVREDPEPAQL
Ga0182037_103535991	3300016404	Soil	MGFFRFAPALQRNQPADALIRVFQSEVGEVRENPEPAQLRITLHVLAGLFVVLLAVSF
Ga0066667_103727791	3300018433	Grasslands Soil	MHLFRFAPALRRNPEPDALIRIFQSEVSEVREDPEPAQLRIT
Ga0066662_117904131	3300018468	Grasslands Soil	MHLFRFAPALRRNPEPDALIRIFQSEVSEVREDPEPAQLRITLHVLAGLFIALL
Ga0066669_105120041	3300018482	Grasslands Soil	MHLFRFAPALRRNPPPDALIRIFQSEVSEVREDPERAQLRVTLSALAGLFVALLAVSFF
Ga0210403_107739852	3300020580	Soil	MHLFRFRFAPALRRNPSPDALIRIFQSEVSEVREDPEP
Ga0210403_108967822	3300020580	Soil	MRLFRFAPVPQRSPPPDALIRIFQSEVGEVREDPEPAQLRITLHVLAGLFTALLA
Ga0210403_109965222	3300020580	Soil	MGLFRFVPARRRNTSPDTLIRIFQSETGEVREDSEPAQL
Ga0210399_108038351	3300020581	Soil	MGLFRFVPATRREPPTDALIRIFQSETAEIREGPEPAQLRLTLYAFTGLLAGLLAVSLV
Ga0210401_106927581	3300020583	Soil	MNLFPSALQRRREPPSAALIRIFQSETAEIREDPEPFQLRLTLHALAGLVIALVAVSLLMQLNRVVAS
Ga0210400_115934391	3300021170	Soil	MGWFRFAPATQREPSADALIRVFQSETAEIREDPEPAQLRLTLPALAGLFFA
Ga0213876_105501712	3300021384	Plant Roots	MDLFRSALQRRREPPSAALIRIFQSETAEIREDPEPF
Ga0210394_116503082	3300021420	Soil	MRLFRFAPVPQRSPPPDALIRIFQSEVGEVREDPEPAQLRITLHVLAGLFTA
Ga0210402_101584812	3300021478	Soil	MRLFRFAPALRRNPPPDALIRIFQSEVSEVREDPEPAQLRVTLHVLAG
Ga0126371_122199301	3300021560	Tropical Forest Soil	MALLRFVPAARREGSPDALLRVFQSETGEIREDPEPAQLRITLYAVV
Ga0126371_126474391	3300021560	Tropical Forest Soil	MGLFSFASIRQREPSTDALIRIFQSETAEIREDPEPARLRFTLHA
Ga0126371_127114082	3300021560	Tropical Forest Soil	MGLYRFALAPRREPSLDPLIRIFQSETAEIREGREPAQLRITL
Ga0179589_104366431	3300024288	Vadose Zone Soil	MDLFPSALQRRREPSSAALIRIFQSETAEVREDPEPFQLRLTLHALAGLVVALVAVSLL
Ga0207663_112461342	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MGLFRFAPAPQRKPPPNALIRIFQSEVDEVREDPEPAQLRLTLYALAGLF
Ga0257146_10302701	3300026374	Soil	MGLFRFVPARRRNTSPDSLIRIFQSETGEVREDCEPAQLRVTLHVLVGLLVAM
Ga0208369_10020932	3300026998	Forest Soil	MHLFRFRFAPALRRNPSPDALIRIFQSEVSEVREDPEPAQLRVTLHVLAG
Ga0208603_10154972	3300027109	Forest Soil	MHLFRFRFAPALRRNPPPDALIRIFQSEVSEVREDPEPAQLR
Ga0208097_10297012	3300027173	Forest Soil	MNLFPSALQRRREPPSAALIRIFQSETAEIREDPEPFQL
Ga0209625_10058731	3300027635	Forest Soil	MHLFRFRFAPALRRNPPPDALIRIFQSEVNEVREDPE
Ga0209656_102563041	3300027812	Bog Forest Soil	MGLFRFAPAQQRNPPPDALIRIFQSEVGEVREDPEPAQLRLTLHLL
Ga0209380_108890811	3300027889	Soil	MNLFPSALQRRREPPSAALIRIFQSETAEIREDPEPFQLRLTLHALAGLVIALVAVSL
Ga0209488_104730131	3300027903	Vadose Zone Soil	MGLFRFAPAPRRNSSPETLIRIFQSETGEVRADPEPAQLRLTLHALAGL
Ga0318516_106934442	3300031543	Soil	MGLFRFVLGTRRNSSPDALIRIFQSESAEVEEDPEPAQTRLTLFTL
Ga0318541_105551922	3300031545	Soil	MGLFRFALGPRRNSSPDVLIRIFQSESAEVQEDPEPAQTRLTLFTLAGLFI
Ga0318538_101502492	3300031546	Soil	MGLFRFALGPRRNSSPDVLIRIFQSESAEVQEDPEPAQTRLTLFTLAGLF
Ga0318538_103613741	3300031546	Soil	MGFFRFAPAVQRKPPADALTRVFQSEVGEVREDSEPAQLRITLHVLTGLLIALLAVS
Ga0318528_103745222	3300031561	Soil	MGLFRFALGPRRNSSPDALIRIFQSESAEVQEDPEPAQTRIT
Ga0318515_103207091	3300031572	Soil	MGLFRFAPAVQREPSPDALIRIFQSETAEIREDSEPAQLRLTLQA
Ga0318542_103170822	3300031668	Soil	MGFFRFAPAPRRNPEPDALVRIFRSEVDEVREDPEPAQLRLTLYVLAGLFLALLGVSIFM
Ga0318561_106347601	3300031679	Soil	MGFFRFAPAPRRNPEPDALVRIFRSEVDEVREDPEPAQLRLTLYVLAGLF
Ga0318574_109085972	3300031680	Soil	MGFFRFAPAVQRKPPADALTRVFQSEVGEVREDSEPAQLRITLHVLTGLLIALLAV
Ga0318560_100039816	3300031682	Soil	MGLRRFVPALRPEPSTDALIRIFQSESAEIREDPEPARLRLTVHALGGLFAALLAVSLV
Ga0318496_104741852	3300031713	Soil	MGLFRFVPAPRREPSTDALIRIFQSETAEIREDPEPARLRLTL
Ga0307469_111127952	3300031720	Hardwood Forest Soil	MGWFRFAPATPREPSADALIRVFQSETAEIREDPEPA
Ga0318500_101710752	3300031724	Soil	MGLFRFVPAPRREPSTDALIRIFQSETAEIREDPEPARLRLTLHALAGLFAALLVVSAVMPMD
Ga0318501_101792471	3300031736	Soil	MGLFRFVLGTRRNSSPDALIRIFQSESAEVQEDPEPAQTRITLYALAGLFVALVAVTVFM
Ga0318501_107973091	3300031736	Soil	MGLYRFALAPRREPPTDPLIRIFQSETAEIREGREPAQ
Ga0318502_108533992	3300031747	Soil	MGFFRFAPAPRRNPEPDALVRIFRSEVDEVREDPEPAQLRLTLYV
Ga0318492_107243182	3300031748	Soil	MGFFRFAPAVQRKPPADALTRVFQSEVGEVREDSEPAQL
Ga0307477_106367012	3300031753	Hardwood Forest Soil	MGLRRFVPALRPEPSTDALIRTFQSESAEIREDPEPARLRLTLHALGGLFA
Ga0318554_106327971	3300031765	Soil	MGSFRLAPMRHEQSSDPLIRVFQSETAEIREDPEPARLRLTLHLLAVLFLSLLAVSVFMP
Ga0318526_102750601	3300031769	Soil	MGLRRFVPALQPEPSTDALIRIFQSESAEIREDPEPARLRLTLHALGGLFA
Ga0318521_109628432	3300031770	Soil	MGFFRFAPAPRRNPEPDALVRIFRSEVDEVREDPEPAQLRLTLYVLAGLFLALLGVSIV
Ga0318546_108740902	3300031771	Soil	MGLFRFALGPRRNSSPDVLIRIFQSESAEVQEDPEPAQT
Ga0318547_107806322	3300031781	Soil	MGLFSFAPIPRREPSTDALIRIFQSETAEIREDAE
Ga0318529_101394651	3300031792	Soil	MGLRRFVPALQPEPSTDALIRIFQSESAEIREDPE
Ga0318550_103615953	3300031797	Soil	MGLFRFALGPRRNASPDALIRIFQSETSEVREDPEPAQLRLT
Ga0318568_100683552	3300031819	Soil	MGSFRLAPMRHEQSSDPLIRVFQSETAEIREDPEPARLRLTLHLLAVLFLSLLAV
Ga0318568_105226491	3300031819	Soil	MGLFRFALGPRRNASPDALIRIFQSETSEVREDPEPAQLRLTLYAVAGL
Ga0318567_103236602	3300031821	Soil	MGLFRFVPAPRREPSTDALIRIFQSETAEIRECPEPAQLRLTLYAFTG
Ga0310917_108771562	3300031833	Soil	MGFFRFAPAVQRKPPADALTRVFQSEVGEVREDSEPAQLRITLHVLTGLLIALLAVSVFM
Ga0306925_106646672	3300031890	Soil	MGFFRFAPAVQRKPPADALTRVFQSEVGEVREDSEPAQLRITLHVLTGL
Ga0306925_119062201	3300031890	Soil	MGFWRFVPALQRNPERDALLRIFRSEVDEVRESREPGQLRLTLYV
Ga0306921_120283791	3300031912	Soil	MGLYRFALAPRREPSPDPLIRIFQSETAEIREGREPAQIRLTLFGVAGLFV
Ga0306921_125343322	3300031912	Soil	MGLFRFALGPRRNSSPDVLIRIFQSESAEVQEDPEPAQTRLTLFTLAGL
Ga0310913_104482381	3300031945	Soil	MGLFRFVPAPRREPSTDALIRIFQSETAEIREDPEPARLRLTLHALAGLFAALLVVSAVMPMDR
Ga0310910_110031743	3300031946	Soil	MGLFRFALGPRRNASPDALIRIFQSETSEVREDPEPAQLRLTLYA
Ga0306922_101965602	3300032001	Soil	MGLFRFVLGTRRNSSPDALIRIFQSESAEVQEDPAPAQTRLTLY
Ga0306922_103161702	3300032001	Soil	MGFFRFAPAVQRKPPADALTRVFQSEVGEVREDSEPAQLRITLHVL
Ga0306922_115301202	3300032001	Soil	MGLYRFALAPRREPPTDPLIRIFQSETAEIREGREPAQLRLTLYAAA
Ga0318532_100971501	3300032051	Soil	MGLFRFVPAPRREPSTDALIRIFQSETAEIREDPEPARLRLTLHA
Ga0318506_100516992	3300032052	Soil	MGLRRFVPALQPEPSTDALIRIFQSESAEIREDPEPARLRLTLHALGGLFAALLAVSL
Ga0318570_103005262	3300032054	Soil	MGLFRFALGPRRNSSPDALIRIFQSESAEVQEDPE
Ga0318553_101076292	3300032068	Soil	MGLFRFAPATRREPSTDALIRIFQSEAAEIREDPEPARLRLTLHALAGLF
Ga0318525_104544812	3300032089	Soil	MGLRRFVPALQPEPSTDALIRIFQSESAEIREDPEPARLRLTL
Ga0318577_103511781	3300032091	Soil	MGLFRFVLGTRRNSSPDALIRIFQSESAEVQEDPEPAQTRLTLYTLAGLFIALVAVTVFM
Ga0318540_102418012	3300032094	Soil	MGLFRFVLGTRRNSSPDALIRIFQSESAEVQEDPEPAQTRLTLYT
Ga0307471_1008399272	3300032180	Hardwood Forest Soil	MGLFRFAPAPQRKPPPNALIRIFQSEVDEVREDPEPAQLRLTLYALAGLFVALLAISVFM
Ga0307472_1007740261	3300032205	Hardwood Forest Soil	MGWFHFAPATRREPSADALIRVFQSETAEIREDPEPAQLRLTLPALAGLFVA
Ga0307472_1015920312	3300032205	Hardwood Forest Soil	MGLFRFAPATPPEPSADALIRIFQSETAEIREFPEP
Ga0306920_1002131543	3300032261	Soil	MGFFRFAPAPRRNPEPDALLRIFRSEVDEIREDAEPAQLRLTLYVLAGLFLALLGVS
Ga0306920_1013428501	3300032261	Soil	MRHEQSSDPLIRVFQSETAEIREDPEPARLRLTLHLLAVLFLS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101935

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences