Metagenome Family F101921

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101921
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	90 residues
Representative Sequence	VNLVETLGVEIGVRQAGTPAAGRAADAVADAFRDAGLEPHFHEFGLLGYDADEPELEIDGERWDAGPCIYSNPTDGTVEGRVRRLGTHS
Number of Associated Samples	87
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.17 %
% of genes near scaffold ends (potentially truncated)	96.08 %
% of genes from short scaffolds (< 2000 bps)	87.25 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.078 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.510 % of family members)
Environment Ontology (ENVO)	Unclassified (39.216 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.059 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.66% β-sheet: 10.26% Coil/Unstructured: 70.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00496	SBP_bac_5	40.20
PF12911	OppC_N	3.92
PF03706	LPG_synthase_TM	0.98
PF03575	Peptidase_S51	0.98
PF00005	ABC_tran	0.98
PF00528	BPD_transp_1	0.98
PF06267	DUF1028	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.98
COG3342	Uncharacterized conserved protein, Ntn-hydrolase superfamily	General function prediction only [R]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.06 %
Unclassified	root	N/A	2.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.06 %
Unclassified	root	N/A	2.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.08 %
Unclassified	root	N/A	2.94 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	82.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Unclassified	root	N/A	2.94 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.98 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	81.37 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.94 %
Unclassified	root	N/A	2.94 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.94 %
Unclassified	root	N/A	2.94 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.94 %
Unclassified	root	N/A	2.94 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.98 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.94 %
Unclassified	root	N/A	2.94 %
Haloferacaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae	0.98 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.94 %
Unclassified	root	N/A	2.94 %
Halogranum	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Halogranum	0.98 %
Leucobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leucobacter	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.94 %
Unclassified	root	N/A	2.94 %
Halogranum gelatinilyticum	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Halogranum → Halogranum gelatinilyticum	0.98 %
Leucobacter chironomi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leucobacter → Leucobacter chironomi	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004114\|Ga0062593_103447456	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300004153\|Ga0063455_100484209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	764	Open in IMG/M
3300005181\|Ga0066678_10918208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300005184\|Ga0066671_10528386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	759	Open in IMG/M
3300005187\|Ga0066675_10668042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300005187\|Ga0066675_11054313	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300005341\|Ga0070691_10167262	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300005343\|Ga0070687_100486493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	828	Open in IMG/M
3300005434\|Ga0070709_10207281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1392	Open in IMG/M
3300005434\|Ga0070709_10531133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	898	Open in IMG/M
3300005434\|Ga0070709_11569804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300005437\|Ga0070710_11066198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300005451\|Ga0066681_10521541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300005518\|Ga0070699_100031699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4563	Open in IMG/M
3300005549\|Ga0070704_100143001	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300005553\|Ga0066695_10746441	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005843\|Ga0068860_101705672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300006163\|Ga0070715_10988346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leucobacter → Leucobacter chironomi	523	Open in IMG/M
3300006175\|Ga0070712_101488327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300006175\|Ga0070712_101641492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300006175\|Ga0070712_101948309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300006791\|Ga0066653_10020959	All Organisms → cellular organisms → Bacteria	2450	Open in IMG/M
3300006854\|Ga0075425_102463225	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300006854\|Ga0075425_102755511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300006871\|Ga0075434_102611194	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Halogranum → Halogranum gelatinilyticum	505	Open in IMG/M
3300006904\|Ga0075424_100039754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4892	Open in IMG/M
3300009100\|Ga0075418_12297112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300009147\|Ga0114129_10581237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1454	Open in IMG/M
3300009148\|Ga0105243_11174027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	779	Open in IMG/M
3300009156\|Ga0111538_11501069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	850	Open in IMG/M
3300010321\|Ga0134067_10198713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	736	Open in IMG/M
3300010322\|Ga0134084_10390824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300010335\|Ga0134063_10610110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300010371\|Ga0134125_11792091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668	Open in IMG/M
3300010399\|Ga0134127_10179336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1952	Open in IMG/M
3300010401\|Ga0134121_10150181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1987	Open in IMG/M
3300012202\|Ga0137363_10719027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300012211\|Ga0137377_10120721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2499	Open in IMG/M
3300012211\|Ga0137377_11612562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300012285\|Ga0137370_10361766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	874	Open in IMG/M
3300012351\|Ga0137386_10649385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	759	Open in IMG/M
3300012356\|Ga0137371_10050923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3201	Open in IMG/M
3300012582\|Ga0137358_10041990	All Organisms → cellular organisms → Bacteria	3031	Open in IMG/M
3300012930\|Ga0137407_11037033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300012944\|Ga0137410_11013113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	708	Open in IMG/M
3300012951\|Ga0164300_10240582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	913	Open in IMG/M
3300012951\|Ga0164300_11058164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300012955\|Ga0164298_11384561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300012958\|Ga0164299_10155666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1270	Open in IMG/M
3300012958\|Ga0164299_11307903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300012961\|Ga0164302_10544824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	829	Open in IMG/M
3300012975\|Ga0134110_10583397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300012984\|Ga0164309_11182211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	641	Open in IMG/M
3300012989\|Ga0164305_11965434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300013768\|Ga0120155_1111465	All Organisms → cellular organisms → Bacteria → Terrabacteria group	759	Open in IMG/M
3300014157\|Ga0134078_10273713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300014166\|Ga0134079_10386609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300017792\|Ga0163161_10549458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	946	Open in IMG/M
3300018051\|Ga0184620_10312071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	531	Open in IMG/M
3300018054\|Ga0184621_10319597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300018054\|Ga0184621_10359488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300018071\|Ga0184618_10057088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1436	Open in IMG/M
3300018076\|Ga0184609_10187166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	962	Open in IMG/M
3300018468\|Ga0066662_12760138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300019356\|Ga0173481_10680992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300019887\|Ga0193729_1148682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	848	Open in IMG/M
3300019996\|Ga0193693_1021246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1204	Open in IMG/M
3300020002\|Ga0193730_1004195	All Organisms → cellular organisms → Bacteria	3955	Open in IMG/M
3300021445\|Ga0182009_10024023	All Organisms → cellular organisms → Bacteria	2352	Open in IMG/M
3300022534\|Ga0224452_1051141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1228	Open in IMG/M
3300025898\|Ga0207692_10267138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1030	Open in IMG/M
3300025898\|Ga0207692_10428271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	829	Open in IMG/M
3300025906\|Ga0207699_10907372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300025915\|Ga0207693_10703352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	783	Open in IMG/M
3300025915\|Ga0207693_11283262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300025915\|Ga0207693_11396282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300025927\|Ga0207687_11497676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300025929\|Ga0207664_10827986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	832	Open in IMG/M
3300026023\|Ga0207677_11648256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300026277\|Ga0209350_1082747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	855	Open in IMG/M
3300026308\|Ga0209265_1106409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300026316\|Ga0209155_1151657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	779	Open in IMG/M
3300026547\|Ga0209156_10365354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300026550\|Ga0209474_10057820	All Organisms → cellular organisms → Bacteria	2746	Open in IMG/M
3300026550\|Ga0209474_10520123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300027907\|Ga0207428_10050773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3316	Open in IMG/M
3300028705\|Ga0307276_10203673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300028709\|Ga0307279_10010880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1104	Open in IMG/M
3300028710\|Ga0307322_10013519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1829	Open in IMG/M
3300028711\|Ga0307293_10110898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	871	Open in IMG/M
3300028715\|Ga0307313_10047866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1248	Open in IMG/M
3300028717\|Ga0307298_10032584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1389	Open in IMG/M
3300028719\|Ga0307301_10084901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	996	Open in IMG/M
3300028811\|Ga0307292_10320849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300028828\|Ga0307312_10860198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300028828\|Ga0307312_11096120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300028878\|Ga0307278_10389881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300028881\|Ga0307277_10136971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1056	Open in IMG/M
3300031720\|Ga0307469_10841400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	845	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.27%
Host-Associated	Host-Associated	13.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.39%
Plants	Host-Associated → Plants	13.73%
Aquatic	Environmental → Aquatic	5.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.78%
Sediment	Environmental → Aquatic → Sediment	5.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.80%
Loam	Environmental → Terrestrial → Soil → Loam	20.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	16.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062593_1034474561	3300004114	Soil	VNLIEALGVDVGVRMAGTPEAGRAADLVAAALREAGLEPGFHEFDLLAYEPDEPLLEIDGDRWDAGPCMYATPTDGTVEGRVRRLGTFS
Ga0063455_1004842091	3300004153	Soil	VNLIETLGVEIGVRQAGTPEAGRAAEAVADAFRDTGLEPRFHEFGLLGYEAEEPELEIDGERWDAGPCIYSNPTDDTVEGRVRRLGTHSIGGFFPEAD
Ga0066678_109182082	3300005181	Soil	VNLVETLGVEIGVRQAGTPAAGRAAEAVADAFRDAGLEPRFHEFGLLGYEAEEPLLEIDGERWDAGPCIYSNPTDGTVEG
Ga0066671_105283862	3300005184	Soil	VNLVETLGVEIGVRQAGTPTAGRAAEAVADAFRDAGLEPRFHEFGLLGYEAEEPLLEIDGERWDTGPCIYSNPTDGTVEGRVRRLGTHSIGG
Ga0066675_106680422	3300005187	Soil	VNLVETLGVEIGVRQAGTPAAGRAAEAVADAFRDAGLEPRFHEFGLLGYEAKEPLLEIDGERWDAGPCIYSNPTDDTVEGRVRRLGTHSIGGFFPEADVFAVED
Ga0066675_110543132	3300005187	Soil	VDLVETLGSEIGVRQAGTPAAARAADAVAEAFRKAGLEPYFHEFGLLGYEAEEPELEINGERWNAGPCMYSNPTDGVVEGRVRRLGDHSIGGFFPE
Ga0070691_101672621	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPAAGRAAEAVADAFRDAGLEPRFHEFGLVGYEAEEPQLEIDGERWDAGPCIYSNPTDGTVEGRVRRVGTHSIGGFFPEADVF
Ga0070687_1004864931	3300005343	Switchgrass Rhizosphere	MLVASARAWSHYTRGVNLVETLGVEIGVRQAGTPSASRAAEAVADAFRDAGLEPRFHEFGLLGYEAEEPQLEIDGERWDAGPCIYSNPTDGTVEGRVRRVGTHSIGGFFPEADVF
Ga0070709_102072812	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNLVETLGVEIGVRQAGTPAAGRAADAVADAFRDAGLEPRFHEFGLLGYDADEPELEIDGERWDAGPCIYSNPTDG
Ga0070709_105311332	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPAASRAAEAVADAFRDAGLEPRFHEFGLLGYEAEEPQLEIEGERWDAGPCIYSNPTDG
Ga0070709_115698042	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPEAGRAAEAIADAFRDAGLEPRFHEFGMLGYEADEPTLEIDGERWDAGPCIYANPTDGTVEGRVRRLGSHSIGGFFPEADIFAVE
Ga0070710_110661982	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPAAGRAADAVADAFRDAGLEPHFHEFGLLGYDADEPELEIDGERWDAGPCIYSNPTDGTV
Ga0066681_105215411	3300005451	Soil	VNLVETLGADIGVRQAGTPAAARAADAVADAFREAGLEPHFHEFGLLGYEAEEPELEIDGERWDAGPCMYSNPTDGFVEGSVRRLGDHSIGGFFPEADVFA
Ga0070699_1000316995	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLVALCFKGRTYTRGVNLVETLGVEIGVRQAGTPAAARAAGAVADAFRDAGLEPRFHEFGLLGYEADEPELEIDGERWDAGPCIYSN
Ga0070704_1001430012	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPQAGRAAEAIADAFRDAGLEPLFHEFGMLGYAADEPTLEIDGERWEAGPCIYANPTDGTVEGRVR
Ga0066695_107464412	3300005553	Soil	VNLVETLGAEIGVRQAGTPAAARAADAVADAFREAGLDPHFHEFGLLGYDAEEPELEIDGERWDAGPCMYSNPTDGFVEGSVRRL
Ga0068860_1017056722	3300005843	Switchgrass Rhizosphere	VNLVETLGVEIGVRQAGTTAASRAAEAVADAFRDTGLEPRFHEFGLLGYEADEPELEIDGERWDAGPCIYSNPTDGTVEG
Ga0070715_109883461	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPEAGRAAEAIADAFRDAGLEPRFHEFGMLGYEADEPTLEIDGERWDAGPCIYANPTDGTVEGRVRRLGSHSIGGFFP
Ga0070712_1014883272	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPEAGRAAEAIADAFRDAGLEPRFHEFGMLGYEADEPTLEIDGERWDAGPCIYANPTDGTVEGRVRRLGSHSIGGFFPEADIFAVENE
Ga0070712_1016414922	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPQAGRAAEAIADAFRDAGLEPGFHEFGMLGYEADEPMLEIDGERWDAGPCIYANPTDGTVEGRVRRLGSHSIGGFFPEADIFAVENE
Ga0070712_1019483091	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTTAASRAAEAVADAFRDTGLEPRFHEFGLLGYEADEPELEIDGERWDAGPCIYSNPTDGTVEGRVRRLGTHSIGGF
Ga0066653_100209591	3300006791	Soil	VNLVETLGVEIGVRQAGTPAASRAANAVADAFRDVGLEPRFHEFGLLGYEADEPELEIDGQRWDAGPCIYASPTDGTVEGRV
Ga0075425_1024632252	3300006854	Populus Rhizosphere	MDLLEALGVEIGVRQAGTPAAERASEAIADAFRELGLEPRFEEFPLLGYDADEPELVIEGKRWAAGPCMYAHPTPDGGVT
Ga0075425_1027555111	3300006854	Populus Rhizosphere	VNLVETLGVEIGVRQAGTPEAGRAAEAIADAFRDAGLEPRFHEFGMLGYEADEPTLEIDGERWDAGPCIYANPTDGTVEGRVRRLGSHSIGGF
Ga0075434_1026111941	3300006871	Populus Rhizosphere	VNLVETLGVEIGVRQAGTPEAGRAAEAIADAFRDAGLEPLFHEFGMLGYEADEPTLEIDGERWEAGPCIYANPTDGTVEGRVRRLGSHSIGGFFP
Ga0075424_1000397541	3300006904	Populus Rhizosphere	VDLVETLGAKIGVRQAGTPAAARAADAVADAFREAGLDPHFHEFGLLGYEADEPELEIDGERWDAGPCMYSNPTDGFVEGSVRRLGDHSIGGFFPEADVF
Ga0075418_122971121	3300009100	Populus Rhizosphere	VDLVETLGAKIGVRQAGTPAAARAADAVADAFREAGLGTHFHEFGLLGYEAEEPELEIDGERWDAGPCMYSNPTNGFVEGSVRRLGDHSIGGFFPEADVFA
Ga0114129_105812371	3300009147	Populus Rhizosphere	VNLVERLGVEIGVRQAGTPEAGRAAEAIADAFRDAGLEPGFHEFGMLGYEADEPTLEIDGERWDAGPCIYANPTDGTVE
Ga0105243_111740272	3300009148	Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPQAGRAAEAIADAFRDAGLEPRFHEFGMLGYEADEPMLEIDGERWDAGPCIYANP
Ga0111538_115010692	3300009156	Populus Rhizosphere	VNLVERLGVEIGVRQAGTPEAGRAAEAIADAFRDAGLEPGFHEFGMLGYEADEPTLEIDGERWDAGPCIYANPTDG
Ga0134067_101987132	3300010321	Grasslands Soil	VSLVQTLGVEIGVRTAGSPEAERAAEAIAEALRAVGLEPAFQELPLLGYDAEEPELEIDGERWDAGPCMYAHPTDGVVEGRVRWIGTSPAEGALSAGALVRRRGRGR
Ga0134084_103908242	3300010322	Grasslands Soil	VNLVETLGVEIGVRQAGTPAASRAANAVADAFRDVGLEPRFHDFGLLGYEAEEPELEVDGERWDAGPCMYSNPTDGFVEG
Ga0134063_106101101	3300010335	Grasslands Soil	VNLVETLGVEIGVRQAGTPAAGRAAEAVADAFRDTGLEPRFHEFGLLGYEAEEPELEIDGERWDAGPCIYSNPTDGTVEG
Ga0134125_117920912	3300010371	Terrestrial Soil	VSLLKTLGVEIGVRQTGTPAAEEAANAIAKVFRELGLDVRFHEFGLLGYEAEEPELEIEGERWDAGPCIY
Ga0134127_101793361	3300010399	Terrestrial Soil	VNLVETLGVEIGVRQAGTPQAGRAAEAIADAFRDAGLEPRFHEFGMLGYEADEPMLEIDGERWDAGPCIYSNPTDGTVEGRVRRLGTHSIGGFFPE
Ga0134121_101501811	3300010401	Terrestrial Soil	VNLVETLGVEIGVRQAGTPQAGRAAEAIADAFRDAGLEPRFHEFGMLGYEADEPMLEIDGERWDAGPCIYANPTDGTVEGRVRRLGSHSIGGF
Ga0137363_107190271	3300012202	Vadose Zone Soil	VNLVETLGVEIGVRQAGTPAAGRAADAVADAFRDAGLEPRFHEFGLLGYDADEPELEIEGERWDAGPCIYSNPTD
Ga0137380_107704441	3300012206	Vadose Zone Soil	VNLVETLGVEIGVRQAGTPAAGRAADAVAEAFRDAGLEPQFHEFGLLGYDADEPELEIEGERWEAGPCIYSNPTDGTVEGRVRRLGTHSIGGFFPEADVFAVEDEQGRE
Ga0137377_101207211	3300012211	Vadose Zone Soil	VNLVETLGVEIGVRQAGTPAAGRAADAVADAFRDAGLDSRFHEFGLLGYDADEPELEIEGERWEAGPCIYSNPTDGTVEGRVRRLGTHSIGGF
Ga0137377_116125622	3300012211	Vadose Zone Soil	VNLVETLGVEIGVRQAGTPAAGRAGDAVADAFRDAGLEPRFHEFGLLGYDADEPELEIEGERWEAGPCIYSNPTDGTVEGRVRRLGTHSIGGF
Ga0137370_103617662	3300012285	Vadose Zone Soil	VNLVETLGLEIGVRQAGTPAADRAAQAVADAFGDAGLDPRFHEFGLLGYEADEPELEIDGERWDAGPCIYSNPTDGTVEGR
Ga0137386_106493851	3300012351	Vadose Zone Soil	VNLVETLGLEIGVRQAGTPAADRAAQAVADAFSDAGLEPGFHEFGMLGYEADEPELEVEGERWDAGPCIYSNPTDGTVEGRVRQLGTHSIGGFFPEADVF
Ga0137371_100509231	3300012356	Vadose Zone Soil	VNLVETLGVEIGVRQAGTPAAGRAADAVAEAFRDAGLEPQFHEFGLLGYDADEPELEIEGERWEAGP
Ga0137358_100419903	3300012582	Vadose Zone Soil	VNLVETLGVEIGVRQAGTPAAGQAADAVAEAFRDAGLEPRFHEFGLLGYDADEPELEIEGERWDAGPCIYSNPTDGTVEGRVRRLGTHSIGGFFPEAD
Ga0137407_110370331	3300012930	Vadose Zone Soil	VNLVETLGVEIGVRQAGTPAAGQAADAVAEAFRDAGLEPRFHQFGLLGYDADEPELEIDGERREAGPCIYSNPTDGTVEGR
Ga0137410_110131132	3300012944	Vadose Zone Soil	VNLVETLGVEIGVRQAGTPAAGQAADAVAEAFRDAGLEPRFHQFGLLGYDADEPELEIDGVRWDAGPCIYSNPTDGTVEGRV
Ga0164300_102405822	3300012951	Soil	VSLLKTLGVEIGVRQTGTPAAEEAADAIAKVFRELGLDVRFHEFGLLGYEAEEPELEIEGERWDAGP*
Ga0164300_110581642	3300012951	Soil	MNLVETLGVEIGVRQAGTPAAGRAADAVADAFRDAGLEPHFHEFGLLGYEADEPELEIDGERWDAGPCI
Ga0164298_113845612	3300012955	Soil	VSLLKALGVEIGVRQTGTPAAEEAADAIAKVFRELGLDVRFHEFGLLGYEAEEPELEIEGERWDAGPCIYASPTDG
Ga0164299_101556661	3300012958	Soil	VSLLKTLGVEIGVRQTGTPAAEEAADAIAKVFRELGLDVRFHEFGLLGYEAEEPELEIEGERWDAGPCIYASPTDGTVEGRVRRLGQHS
Ga0164299_113079031	3300012958	Soil	VNLVETLGVEIGVRQAGTPAVGRAADAVADAFRDAGLEPHFHEFGLLGYDADEPELEIDGERWDAGPCIYSNPTDGTVEGRVRRLGTHSIGGFFPEADVFAVEDE
Ga0164302_105448241	3300012961	Soil	VSLIETLGVEIGVRQAGTPAAREAAEAVADAFREAGLEPRFHEFGLLGYDADEPDLEIDGKRWEAGPCIYSNPTDGT
Ga0134110_105833971	3300012975	Grasslands Soil	MIEVLGREIGPRTAGSPAAARAAEAIAEALRSIGLAPRMQEFPLLGYEAEEPELEIEGERWEAGPCMYAHPTDGVVEGRVRHIGQTSLGEFFPPAHVFAV
Ga0164309_111822111	3300012984	Soil	VSLLKTLGVEIGVRQTGTPAAEEAADAIAKVFRELGLDVRFHEFGLLGYEAEEPELEIEGERWDAGPCIYASPTDGTV
Ga0164305_119654342	3300012989	Soil	MNLVETLGVEIGVRQAGTPAAGRAADAVADAFRDAGLEPHFHEFGLLGYEADEPELEIDGERWDAGPCIYSNPTDGTVEGRVRRLGTHSIGGFFPEA
Ga0157375_115465851	3300013308	Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPQAGRAAEAIADAFRDAGLEPRFHEFGMLGYEADEPTLEIDGERWDAGPCIYANPTDGTVEGRVRRLGSHSIGGFFPEADIFAVENESGR
Ga0120155_11114652	3300013768	Permafrost	VNLVETLSGTIGVRTAGSEEAARAADAVADAFRELGLKPRFQEFPLLGYDPEEPELEIDGERWPAGPCLYAQPGEVEG
Ga0134078_102737131	3300014157	Grasslands Soil	VNLIETLGVEIGVRQAGTPEAGRAAEAVADAFRDTGLDPRFHEFGLLGYEEEEPELEIDGERWDAGPCIYSNPTDGTVEGRV
Ga0134079_103866091	3300014166	Grasslands Soil	VNLVETLGVEIGVRQVGTPAADEAAEAVAAAFRDVGLAPRFHDFSLLGYEADEPLLEIEGERWDAGPCMYATPTDGVAEGTVRRLG
Ga0163161_105494582	3300017792	Switchgrass Rhizosphere	MAMLVARACTWSHYTRCVNLIETLGVEIGVRQAGTPAASRAAEAVADAFRDAGLEPRFHEFGLLGYEAEEPQLEIEGERWDAGPCIYSNPTDGTVEGRVRRLG
Ga0184620_103120711	3300018051	Groundwater Sediment	MLVARACARSHYTRCVNLVETLGVEIGVRQAGTPAASRAAEAVADAFRDAGLEPRFHEFGLLGYEADEPELEIEGERWDAGPCIYSN
Ga0184621_103195971	3300018054	Groundwater Sediment	VLGGNYTRCVNLVETLGVEIGVRQAGTPAASRAAEAVADAFRDAGLEPRFHEFGLLGYEADEPELEIEGERWDAGPCIYSNPTDSTVEGRVRRL
Ga0184621_103594882	3300018054	Groundwater Sediment	MLVARVCVWSHYTRCVNLIETLGVEIGVRQAGTPAASRAAEAVADAFRDAGLEPRFHEFGLLGYEAEEPQLEIDGERWDAGPCIYSNP
Ga0184618_100570882	3300018071	Groundwater Sediment	VSLIETLGVEIGVRQAGTPAAHEAAEAVAAAFRDAGLEPRFHEFGLLGYDADEPELEIDGERWDAGPCIYSNP
Ga0184609_101871662	3300018076	Groundwater Sediment	MLVARVCVWSHYTRCVNLIETLGVEIGVRQAGTPAASRAAEAVADAFRDAGLEPRFHEFGLLGYEAEEPQLEIDGERWEAGPCIYSNPTDGTVEGRMRRL
Ga0066662_127601381	3300018468	Grasslands Soil	VNLVETLGVEIGVRQAGTPAAGQAADAVAEAFRDAGLEPRFHEFGLLGYDADEPELEIEGEHWEAGPCIYSNPTDGTVEGRARRLGTHSIGGFFPEADVFAVED
Ga0173481_106809921	3300019356	Soil	VNLVETLGVEIGVRQAGTPQAGRAAEAIADAFRDAGLEPLFHEFGMLGYEADEPTLEIDGERWDAGPCIYANPTDGTVEGSVRRLGAHSIGGFFPE
Ga0193729_11486822	3300019887	Soil	MNLVETLGVEIGVRQAGTPAAREAAEAVADAFRDAGLEPRFHEFGLLGYDADEPELEIEGERWEAGPCIYSNPTDGTVEGRV
Ga0193693_10212461	3300019996	Soil	MAMLVARACTWSHYTRCVNLIETLGVEIGVRQAGTPAASRAAEAVADAFRDAGLEPRFHEFGLLGYEADEPELEIEGERWDAGPCIYSNPTDSTVEGRVRRLGTHSI
Ga0193730_10041954	3300020002	Soil	MLVARACARSHYTRCVNLVETLGVEIGVRQAGTPAAHEAAEAVAAALRDAGLEPRFHEFGLLGYDADEPELEIDGERWDAGRCIYSNPTDGTVEGRV
Ga0182009_100240231	3300021445	Soil	VDLVETLGAKIGVRQAGTPAAARAADAVADAFREAGLDPHFHEFGLLGYEAEEPELEIDGERWDAGPCMYSNSTDGFVEGSVRRL
Ga0224452_10511412	3300022534	Groundwater Sediment	MLVARVCVWSHYTRCVNLIETLGVEIGVRQAGTPAASRAAEAVADAFRDAGLEPRFHEFGLLGYEAEEPQLEIDGERWDAGPCIYSNPTDGAVEGRVRR
Ga0207692_102671381	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPAAGRAADAVADAFRDAGLEPHFHEFGLLGYDADEPELEIDGERWDAGPCIYSNPTDGT
Ga0207692_104282712	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MNLVETLGVEIGVRQAGTPAAGRAADAVADAFRDAGLEPRFHEFGLLGYDADEPELEIDGERWDAGPCIYSNPTDGTVEGRVRRLGTHSIGGFFPEADVFAVED
Ga0207699_109073722	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MNLVETLGVEIGVRQAGTPAAGRAADAVSDAFRDAGLETRFHEFGLLGYDADEPELEIDGERWDAGPCIYSNPTDGTVEG
Ga0207693_107033521	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPAAGRAADAVADAFRDAGLEPHFHEFGLLGYDADEPELEIDGERWDAGPCIYSNPTDGTVEGR
Ga0207693_112832621	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPEAGRAAEAIADAFRDAGLEPRFHEFGMLGYEADEPTLEIDGERWDAGPCIYANPTDGTVEGRVRRLGSHSIGGFFPEAD
Ga0207693_113962821	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VNLVETLGVEIGVRQAGTPQAGRAAEAIADAFRDAGLEPGFHEFGMLGYEADEPMLEIDGERWDAGPCIYANPTDGTVEGRVRRLGSHSIGGFFPEAD
Ga0207687_114976762	3300025927	Miscanthus Rhizosphere	MAMLVARACTWSHYTRCVNLIETLGVEIGVRQAGTPAASRAAEAVADAFRDAGLEPRFHEFGLLGYEAEEPQLEIDGERWDAGPCIYSNPTDGTVEGRV
Ga0207664_108279862	3300025929	Agricultural Soil	VNLVETLGVEIGVRQAGTPAAGRAADAVADAFRDAGLEPHFHEFGLLGYDADEPELEIDGERWDAGPCIYSNPTDGTVEGRVRRLGTHS
Ga0207677_116482561	3300026023	Miscanthus Rhizosphere	MAMLVARACTWSHYTRCVNLIETLGVEIGVRQAGTPAASRAAEAVADAFRDAGLEPRFHEFGLLGYEAEEPQLEIEGERWDAGPCIYSNPTDGTVEGRVRRLGTHSI
Ga0209350_10827472	3300026277	Grasslands Soil	VNLVETLGVEIGVRQAGTPAAGRAAEAVAEAFRDAGLEPYFHEFGLLGYEADEPELEIDGERWDAGPCMYASPTDGTVEGRVRRLGTH
Ga0209265_11064091	3300026308	Soil	VNLVETLGVEIGVRQAGTPAAGRAAEAVADAFRDAGLEPRFHEFGLLGYEAKEPLLEIDGERWDAGPCIYSNPTDDTVEGRVRRLGTHSIGGFFPEADVFAVEDDK
Ga0209155_11516572	3300026316	Soil	VNLVETLGADIGVRQAGTPAAARAADAVADAFREAGLEPHFHEFGLLGYEAEEPELEIDGERWDAGPCMYSNPTDGFVEGSVRRLGDHSIGGFFP
Ga0209156_103653541	3300026547	Soil	VDLVETLGSEIGVRQAGTPAAARAADAVAEAFRKAGLEPYFHEFGLLGYEAEEPGLEINGERWNAGPCMYSNPTD
Ga0209474_100578201	3300026550	Soil	VSLVETLGSSIGVRTAGSPEAALAAEAIADAFRAAGLDPHFQEFPLLGYDAEEPELEIDGERWPAGPCMYAHPTDGVVE
Ga0209474_105201232	3300026550	Soil	VNLIETLGVEIGVRQAGTPEAGRAAEAVADAFRDTGLEPRFHEFGLLGYEAEEPELEIDGERWDAGPCIYSNPTDGTVEGRVR
Ga0207428_100507734	3300027907	Populus Rhizosphere	VDLVETLGAKIGVRQAGTPAAARAADAVADAFREAGLDPHFHEFGLLGYEADEPELEIDGERWDAGPCMYSNPTDGF
Ga0307276_102036732	3300028705	Soil	VNLVETLGVEIGVRQAGTPAAGRAADAVADAFREAGLEPRFHEFGLLGYEADEPELEIDGERWDAGPCIYASPTDGLVEGRVRRLGTHSIGGF
Ga0307279_100108801	3300028709	Soil	VSLLETLGVEIGVRQAGTPAAKEAADAVAEVFRELGLDVRFHEFGLLGYEAEEPELEIEGERWDAGPCIYASPTDGTVEGRVRRLGQHSIGGFFPEADVFAVDD
Ga0307322_100135191	3300028710	Soil	VSLLETLGVEIGVRQAGTPAAKEAADAVAEVFRELGLDVRFHEFGLLGYEAEEPELEIEGERWDAGPCIYASPTDGTVEGRVRRLGQHSIGGFFPEADVFVVEDE
Ga0307293_101108981	3300028711	Soil	MLVARACARSHYTRCVNLVETLGVEIGVRQAGTPAAGCAAEAVADAFRDAGLEPRFHEFGLLGYDADEPELEIDGERWDAGPCIYSNPTDGTVEGRARRLGTHSIGGFFPEA
Ga0307313_100478661	3300028715	Soil	VSLLETLGVEIGVRQAGTPAAKEAADAVAEVFRELGLDVRFHEFGLLGYEAEEPELEIEGERWDAGPCIYASPTDGTVEGRVRRLGQHSIGGFFPEAD
Ga0307298_100325842	3300028717	Soil	VSLLETLGVEIGVRQAGTPAAKEAADAVAEVFRELGLDVRFHEFGLLGYEAEEPELEIEGERWDAGPCIYASPTDGTVEGRVRRLGQHSID
Ga0307301_100849012	3300028719	Soil	VSLLETLGVEIGVRQAGTPAAKEAADAVAEVFRELGLDVRFHEFGLLGYEAEEPELEIEGERWDAGPCIYASPTDGTVEGRVRRLGQHSI
Ga0307297_101396261	3300028754	Soil	VSLLETLGVEIGVRQAGTPAAKKAADAIAEAFRELGLDVRFHEFGLLGYEAEEPQLEIEGERWDAGPCIYASPTDGTVEGRVRRLGQHSIGGFFPEADVFAVEDGEGHEL
Ga0307292_103208492	3300028811	Soil	VNLVDTLGVEIGVRQAGTPAAGQAAEAVAEAFRETGLKPRFHEFGLLGYEAEEPELEVDGERWDAGPCMYSNPTDGFVEGRVRRLGDHSIGGFFPEADVFAVEDES
Ga0307312_108601981	3300028828	Soil	LNLVETLGSEIGVRQAGTPAAGRAAEVVADAFREAGLEPRFHEFELLGYEADEPELEIDGERWDAGPCMYANPTD
Ga0307312_110961201	3300028828	Soil	VSLIETLGVEIGVRQAGTPAAHEAAEAVAAAFRDAGLEPRFHEFGLLGYDADEPELEIDGERWDAGPCIYSNPTDGTVEGRVRRLG
Ga0307278_103898812	3300028878	Soil	MLVARVCVWSHYTRCVNLIETLGVEIGVRQAGTPAASRAAEAVADAFRDAGLEPRFHEFGLLGYEAEEPQLEIDGERWDAGPCIY
Ga0307277_101369711	3300028881	Soil	VSLLETLGVEIGVRQAGTPAAKEAADAVAEVFRELGLDVRFHEFGLLGYEAEEPELEIEGERWDAGPCIYASPTDGTVEGRVRRLGQHSIGGFFPEADVFAVDDE
Ga0307469_108414002	3300031720	Hardwood Forest Soil	VLGRNYTRCVNLVETLGVEIGVRQAGTPAASRAAEAVADAFRDAGLEPRFHEFGLLGYEANEPELEIEGERWDAGPCIYSNPTDGTVEGRVRRLGTH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101921

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences