Basic Information | |
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Family ID | F101914 |
Family Type | Metagenome |
Number of Sequences | 102 |
Average Sequence Length | 57 residues |
Representative Sequence | MTTNWTCSNCGCVHWDGLKPISCIMCDNDEFLDGPEKYYKEDLSKQTNYVKEKKDDKD |
Number of Associated Samples | 72 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 74.51 % |
% of genes near scaffold ends (potentially truncated) | 31.37 % |
% of genes from short scaffolds (< 2000 bps) | 78.43 % |
Associated GOLD sequencing projects | 58 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.15 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (43.137 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (58.823 % of family members) |
Environment Ontology (ENVO) | Unclassified (88.235 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (87.255 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 3.49% β-sheet: 4.65% Coil/Unstructured: 91.86% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.15 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 102 Family Scaffolds |
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PF07883 | Cupin_2 | 16.67 |
PF06067 | DUF932 | 11.76 |
PF00190 | Cupin_1 | 4.90 |
PF07486 | Hydrolase_2 | 4.90 |
PF02511 | Thy1 | 3.92 |
PF10544 | T5orf172 | 1.96 |
PF11753 | DUF3310 | 0.98 |
PF00145 | DNA_methylase | 0.98 |
PF01507 | PAPS_reduct | 0.98 |
PF13155 | Toprim_2 | 0.98 |
PF12728 | HTH_17 | 0.98 |
COG ID | Name | Functional Category | % Frequency in 102 Family Scaffolds |
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COG3773 | Cell wall hydrolase CwlJ, involved in spore germination | Cell cycle control, cell division, chromosome partitioning [D] | 4.90 |
COG1351 | Thymidylate synthase ThyX, FAD-dependent family | Nucleotide transport and metabolism [F] | 3.92 |
COG0270 | DNA-cytosine methylase | Replication, recombination and repair [L] | 0.98 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 56.86 % |
Unclassified | root | N/A | 43.14 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300001450|JGI24006J15134_10082344 | All Organisms → Viruses → Predicted Viral | 1200 | Open in IMG/M |
3300001450|JGI24006J15134_10106437 | All Organisms → Viruses | 996 | Open in IMG/M |
3300001450|JGI24006J15134_10183407 | Not Available | 654 | Open in IMG/M |
3300001460|JGI24003J15210_10020426 | All Organisms → Viruses → Predicted Viral | 2527 | Open in IMG/M |
3300001460|JGI24003J15210_10067323 | All Organisms → Viruses → Predicted Viral | 1129 | Open in IMG/M |
3300001472|JGI24004J15324_10001878 | All Organisms → cellular organisms → Bacteria | 8375 | Open in IMG/M |
3300002242|KVWGV2_10298290 | Not Available | 636 | Open in IMG/M |
3300002484|JGI25129J35166_1063054 | Not Available | 691 | Open in IMG/M |
3300002514|JGI25133J35611_10018288 | All Organisms → Viruses → Predicted Viral | 2836 | Open in IMG/M |
3300002760|JGI25136J39404_1022963 | All Organisms → Viruses → Predicted Viral | 1133 | Open in IMG/M |
3300003690|PicViral_1004141 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 6895 | Open in IMG/M |
3300004448|Ga0065861_1036003 | Not Available | 721 | Open in IMG/M |
3300004448|Ga0065861_1181090 | Not Available | 640 | Open in IMG/M |
3300004457|Ga0066224_1058251 | All Organisms → Viruses → Predicted Viral | 3603 | Open in IMG/M |
3300004457|Ga0066224_1093578 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Sneathiella → unclassified Sneathiella → Sneathiella sp. | 552 | Open in IMG/M |
3300004457|Ga0066224_1333315 | Not Available | 522 | Open in IMG/M |
3300006164|Ga0075441_10007392 | All Organisms → Viruses → Predicted Viral | 4769 | Open in IMG/M |
3300006164|Ga0075441_10070478 | All Organisms → Viruses → Predicted Viral | 1362 | Open in IMG/M |
3300006165|Ga0075443_10212302 | Not Available | 696 | Open in IMG/M |
3300006352|Ga0075448_10024210 | All Organisms → Viruses → Predicted Viral | 1964 | Open in IMG/M |
3300006738|Ga0098035_1087791 | All Organisms → Viruses → Predicted Viral | 1093 | Open in IMG/M |
3300006738|Ga0098035_1168162 | Not Available | 740 | Open in IMG/M |
3300006750|Ga0098058_1108844 | Not Available | 746 | Open in IMG/M |
3300006752|Ga0098048_1123893 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp. | 775 | Open in IMG/M |
3300006754|Ga0098044_1122883 | All Organisms → Viruses → Predicted Viral | 1053 | Open in IMG/M |
3300006789|Ga0098054_1149531 | Not Available | 863 | Open in IMG/M |
3300006789|Ga0098054_1295227 | Not Available | 580 | Open in IMG/M |
3300006810|Ga0070754_10024782 | All Organisms → Viruses → Predicted Viral | 3439 | Open in IMG/M |
3300006920|Ga0070748_1193085 | Not Available | 746 | Open in IMG/M |
3300006926|Ga0098057_1137129 | Not Available | 597 | Open in IMG/M |
3300006929|Ga0098036_1006815 | All Organisms → Viruses → Predicted Viral | 3822 | Open in IMG/M |
3300006929|Ga0098036_1043954 | All Organisms → Viruses → Predicted Viral | 1393 | Open in IMG/M |
3300006947|Ga0075444_10051362 | All Organisms → Viruses → Predicted Viral | 1949 | Open in IMG/M |
3300006947|Ga0075444_10096875 | All Organisms → Viruses → Predicted Viral | 1297 | Open in IMG/M |
3300006947|Ga0075444_10177457 | Not Available | 875 | Open in IMG/M |
3300009173|Ga0114996_10114453 | All Organisms → Viruses → Predicted Viral | 2267 | Open in IMG/M |
3300009422|Ga0114998_10051252 | All Organisms → Viruses → Predicted Viral | 2166 | Open in IMG/M |
3300009425|Ga0114997_10299372 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Sneathiella → unclassified Sneathiella → Sneathiella sp. | 891 | Open in IMG/M |
3300009425|Ga0114997_10758095 | Not Available | 506 | Open in IMG/M |
3300009428|Ga0114915_1139834 | Not Available | 694 | Open in IMG/M |
3300009512|Ga0115003_10941290 | Not Available | 502 | Open in IMG/M |
3300009601|Ga0114914_1049353 | Not Available | 681 | Open in IMG/M |
3300009786|Ga0114999_10464912 | Not Available | 983 | Open in IMG/M |
3300010155|Ga0098047_10385231 | Not Available | 525 | Open in IMG/M |
3300017757|Ga0181420_1219528 | Not Available | 547 | Open in IMG/M |
3300017772|Ga0181430_1221619 | Not Available | 537 | Open in IMG/M |
3300017776|Ga0181394_1183744 | Not Available | 642 | Open in IMG/M |
3300022178|Ga0196887_1051440 | All Organisms → Viruses → Predicted Viral | 1048 | Open in IMG/M |
(restricted) 3300024517|Ga0255049_10384935 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp. | 647 | Open in IMG/M |
(restricted) 3300024518|Ga0255048_10168594 | All Organisms → Viruses → Predicted Viral | 1072 | Open in IMG/M |
(restricted) 3300024520|Ga0255047_10206739 | Not Available | 999 | Open in IMG/M |
(restricted) 3300024520|Ga0255047_10603473 | Not Available | 550 | Open in IMG/M |
3300025052|Ga0207906_1028918 | Not Available | 764 | Open in IMG/M |
3300025052|Ga0207906_1046243 | Not Available | 587 | Open in IMG/M |
3300025066|Ga0208012_1035925 | Not Available | 754 | Open in IMG/M |
3300025069|Ga0207887_1029800 | Not Available | 876 | Open in IMG/M |
3300025069|Ga0207887_1032831 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Sneathiella → unclassified Sneathiella → Sneathiella sp. | 836 | Open in IMG/M |
3300025071|Ga0207896_1010225 | All Organisms → Viruses → Predicted Viral | 1681 | Open in IMG/M |
3300025071|Ga0207896_1016992 | All Organisms → Viruses → Predicted Viral | 1274 | Open in IMG/M |
3300025079|Ga0207890_1046032 | Not Available | 753 | Open in IMG/M |
3300025109|Ga0208553_1146881 | Not Available | 518 | Open in IMG/M |
3300025112|Ga0209349_1038016 | All Organisms → Viruses → Predicted Viral | 1569 | Open in IMG/M |
3300025112|Ga0209349_1039727 | All Organisms → Viruses → Predicted Viral | 1525 | Open in IMG/M |
3300025114|Ga0208433_1087162 | Not Available | 787 | Open in IMG/M |
3300025120|Ga0209535_1009219 | All Organisms → cellular organisms → Bacteria | 5690 | Open in IMG/M |
3300025125|Ga0209644_1004779 | All Organisms → Viruses → Predicted Viral | 2693 | Open in IMG/M |
3300025128|Ga0208919_1008598 | All Organisms → Viruses → Predicted Viral | 4305 | Open in IMG/M |
3300025131|Ga0209128_1074946 | All Organisms → Viruses → Predicted Viral | 1152 | Open in IMG/M |
3300025131|Ga0209128_1147786 | Not Available | 706 | Open in IMG/M |
3300025131|Ga0209128_1190664 | Not Available | 585 | Open in IMG/M |
3300025132|Ga0209232_1113301 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_13_64_14 | 902 | Open in IMG/M |
3300025137|Ga0209336_10032684 | All Organisms → Viruses → Predicted Viral | 1734 | Open in IMG/M |
3300025137|Ga0209336_10070358 | All Organisms → Viruses → Predicted Viral | 1038 | Open in IMG/M |
3300025141|Ga0209756_1104339 | All Organisms → Viruses → Predicted Viral | 1216 | Open in IMG/M |
3300025141|Ga0209756_1120496 | All Organisms → Viruses → Predicted Viral | 1098 | Open in IMG/M |
3300025168|Ga0209337_1001724 | All Organisms → cellular organisms → Bacteria | 16405 | Open in IMG/M |
3300025168|Ga0209337_1083378 | All Organisms → Viruses → Predicted Viral | 1540 | Open in IMG/M |
3300025168|Ga0209337_1096956 | All Organisms → Viruses → Predicted Viral | 1385 | Open in IMG/M |
3300025168|Ga0209337_1275489 | Not Available | 627 | Open in IMG/M |
3300025266|Ga0208032_1032213 | All Organisms → Viruses → Predicted Viral | 1376 | Open in IMG/M |
3300025266|Ga0208032_1080559 | Not Available | 669 | Open in IMG/M |
3300025652|Ga0208134_1092206 | Not Available | 853 | Open in IMG/M |
3300025873|Ga0209757_10001227 | Not Available | 6174 | Open in IMG/M |
3300027668|Ga0209482_1149240 | Not Available | 691 | Open in IMG/M |
3300027704|Ga0209816_1098754 | All Organisms → Viruses → Predicted Viral | 1144 | Open in IMG/M |
3300027704|Ga0209816_1168020 | Not Available | 762 | Open in IMG/M |
3300027714|Ga0209815_1018741 | All Organisms → Viruses → Predicted Viral | 2926 | Open in IMG/M |
3300027714|Ga0209815_1106599 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Sneathiella → unclassified Sneathiella → Sneathiella sp. | 928 | Open in IMG/M |
3300027771|Ga0209279_10273003 | Not Available | 518 | Open in IMG/M |
3300027779|Ga0209709_10267369 | Not Available | 748 | Open in IMG/M |
3300027791|Ga0209830_10018638 | All Organisms → Viruses → Predicted Viral | 4125 | Open in IMG/M |
3300027810|Ga0209302_10409867 | Not Available | 611 | Open in IMG/M |
3300027838|Ga0209089_10037726 | All Organisms → Viruses → Predicted Viral | 3204 | Open in IMG/M |
3300027844|Ga0209501_10041102 | All Organisms → Viruses → Predicted Viral | 3412 | Open in IMG/M |
3300028022|Ga0256382_1069217 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp. | 835 | Open in IMG/M |
3300028125|Ga0256368_1013768 | All Organisms → Viruses → Predicted Viral | 1391 | Open in IMG/M |
3300031519|Ga0307488_10006452 | All Organisms → cellular organisms → Bacteria | 9644 | Open in IMG/M |
3300031519|Ga0307488_10050383 | All Organisms → Viruses → Predicted Viral | 3229 | Open in IMG/M |
3300031519|Ga0307488_10074629 | All Organisms → Viruses → Predicted Viral | 2540 | Open in IMG/M |
3300031626|Ga0302121_10061121 | All Organisms → Viruses → Predicted Viral | 1152 | Open in IMG/M |
3300031687|Ga0308008_1089417 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Sneathiella → unclassified Sneathiella → Sneathiella sp. | 719 | Open in IMG/M |
3300033742|Ga0314858_110335 | Not Available | 701 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 58.82% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 12.75% |
Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 4.90% |
Deep Ocean | Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean | 3.92% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 3.92% |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 3.92% |
Sackhole Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine | 2.94% |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 2.94% |
Sea-Ice Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine | 1.96% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 0.98% |
Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 0.98% |
Marine, Hydrothermal Vent Plume | Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume | 0.98% |
Marine Sediment | Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment | 0.98% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300001450 | Marine viral communities from the Pacific Ocean - LP-53 | Environmental | Open in IMG/M |
3300001460 | Marine viral communities from the Pacific Ocean - LP-28 | Environmental | Open in IMG/M |
3300001472 | Marine viral communities from the Pacific Ocean - LP-32 | Environmental | Open in IMG/M |
3300002242 | Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat | Environmental | Open in IMG/M |
3300002484 | Marine viral communities from the Pacific Ocean - ETNP_2_130 | Environmental | Open in IMG/M |
3300002514 | Marine viral communities from the Pacific Ocean - ETNP_6_85 | Environmental | Open in IMG/M |
3300002760 | Marine viral communities from the Pacific Ocean - ETNP_6_1000 | Environmental | Open in IMG/M |
3300003690 | Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assembly | Environmental | Open in IMG/M |
3300004448 | Marine viral communities from Newfoundland, Canada BC-1 | Environmental | Open in IMG/M |
3300004457 | Marine viral communities from Newfoundland, Canada MC-1 | Environmental | Open in IMG/M |
3300006164 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA | Environmental | Open in IMG/M |
3300006165 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA | Environmental | Open in IMG/M |
3300006352 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA | Environmental | Open in IMG/M |
3300006738 | Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG | Environmental | Open in IMG/M |
3300006750 | Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG | Environmental | Open in IMG/M |
3300006752 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG | Environmental | Open in IMG/M |
3300006754 | Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG | Environmental | Open in IMG/M |
3300006789 | Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG | Environmental | Open in IMG/M |
3300006810 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 | Environmental | Open in IMG/M |
3300006920 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 | Environmental | Open in IMG/M |
3300006926 | Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG | Environmental | Open in IMG/M |
3300006929 | Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG | Environmental | Open in IMG/M |
3300006947 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA | Environmental | Open in IMG/M |
3300009173 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 | Environmental | Open in IMG/M |
3300009422 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 | Environmental | Open in IMG/M |
3300009425 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 | Environmental | Open in IMG/M |
3300009428 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 | Environmental | Open in IMG/M |
3300009512 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 | Environmental | Open in IMG/M |
3300009601 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38 | Environmental | Open in IMG/M |
3300009786 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 | Environmental | Open in IMG/M |
3300010155 | Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG | Environmental | Open in IMG/M |
3300017757 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22 | Environmental | Open in IMG/M |
3300017772 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10 | Environmental | Open in IMG/M |
3300017776 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23 | Environmental | Open in IMG/M |
3300022178 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3) | Environmental | Open in IMG/M |
3300024517 (restricted) | Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3 | Environmental | Open in IMG/M |
3300024518 (restricted) | Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2 | Environmental | Open in IMG/M |
3300024520 (restricted) | Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1 | Environmental | Open in IMG/M |
3300025052 | Marine viral communities from the Pacific Ocean - LP-37 (SPAdes) | Environmental | Open in IMG/M |
3300025066 | Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
3300025069 | Marine viral communities from the Pacific Ocean - LP-38 (SPAdes) | Environmental | Open in IMG/M |
3300025071 | Marine viral communities from the Pacific Ocean - LP-36 (SPAdes) | Environmental | Open in IMG/M |
3300025079 | Marine viral communities from the Pacific Ocean - LP-48 (SPAdes) | Environmental | Open in IMG/M |
3300025109 | Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025112 | Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes) | Environmental | Open in IMG/M |
3300025114 | Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025120 | Marine viral communities from the Pacific Ocean - LP-28 (SPAdes) | Environmental | Open in IMG/M |
3300025125 | Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes) | Environmental | Open in IMG/M |
3300025128 | Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025131 | Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes) | Environmental | Open in IMG/M |
3300025132 | Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes) | Environmental | Open in IMG/M |
3300025137 | Marine viral communities from the Pacific Ocean - LP-32 (SPAdes) | Environmental | Open in IMG/M |
3300025141 | Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes) | Environmental | Open in IMG/M |
3300025168 | Marine viral communities from the Pacific Ocean - LP-53 (SPAdes) | Environmental | Open in IMG/M |
3300025266 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66 (SPAdes) | Environmental | Open in IMG/M |
3300025652 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes) | Environmental | Open in IMG/M |
3300025873 | Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes) | Environmental | Open in IMG/M |
3300027668 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes) | Environmental | Open in IMG/M |
3300027704 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes) | Environmental | Open in IMG/M |
3300027714 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes) | Environmental | Open in IMG/M |
3300027771 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes) | Environmental | Open in IMG/M |
3300027779 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes) | Environmental | Open in IMG/M |
3300027791 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes) | Environmental | Open in IMG/M |
3300027810 | Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes) | Environmental | Open in IMG/M |
3300027838 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes) | Environmental | Open in IMG/M |
3300027844 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes) | Environmental | Open in IMG/M |
3300028022 | Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m | Environmental | Open in IMG/M |
3300028125 | Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB | Environmental | Open in IMG/M |
3300031519 | Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2 | Environmental | Open in IMG/M |
3300031626 | Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface | Environmental | Open in IMG/M |
3300031687 | Marine microbial communities from water near the shore, Antarctic Ocean - #125 | Environmental | Open in IMG/M |
3300033742 | Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI24006J15134_100823442 | 3300001450 | Marine | MTTNWTCSNCGCVHWDGIKPISCIMCDNDEFLDGPEKYYTGKLDKQTNYVKEKDDGED* |
JGI24006J15134_101064371 | 3300001450 | Marine | MTNNWTCSNCGCVHWDELQPISCIMCNNDTFYDSPDKFYQKDLETQTNYVKD |
JGI24006J15134_101834073 | 3300001450 | Marine | MTNNWTCSNCGCVHWDELQPISCIMCDNDIFHDSPDKFYQKDLETQTNYVKDKENEDS* |
JGI24003J15210_100204268 | 3300001460 | Marine | MTTNWTCSNCGCVHWDGIKPISCIMCNNDEFLDGPEKYYTGKLDKQTNYIKEKKDE* |
JGI24003J15210_100673234 | 3300001460 | Marine | MTNNWTCSNCGCVHWDELQPISCIMCNNDTFYDSPDKFYQKDLETQTNYVKDKENEDS* |
JGI24004J15324_100018781 | 3300001472 | Marine | RRKKMTNNWTCSNCGCVHWDELQPISCIMCNNDTFYDSPDKFYQKDLETQTNYVKDKENEDS* |
KVWGV2_102982904 | 3300002242 | Marine Sediment | MMNSWTCSRCGCVHWDELEPISCIMCDNGTFYDSPDKFYQKELETQTNYVKETDDAKD* |
JGI25129J35166_10630543 | 3300002484 | Marine | MVNNYTCSRCGCVHWDELKPISCIMCDNGEFYDSPDDFYDKEKLSKQTNYVKEKKDAED* |
JGI25133J35611_100182885 | 3300002514 | Marine | MTTNWTCSNCGCVHWDGIKPISCIMCNNDVFLDGPEKFYSTKKILNQKETDDDKD* |
JGI25136J39404_10229635 | 3300002760 | Marine | NWTCSNCGCVHWDGLKPISCIMCDNDEFLDGPEKYYKESFSKQTNYVKEKEDDKD* |
PicViral_100414121 | 3300003690 | Marine, Hydrothermal Vent Plume | MTIHWTCSNCGCVHWDGLKPISCIMCDNGEFLDGPEKYYKESFSKQTNYVKEKKDE* |
Ga0065861_10360032 | 3300004448 | Marine | MANNWTCSNCGCVHWDELVPISCIMCDNGTFHDSPDKFYKKDFETQTNYVKDKENEDS* |
Ga0065861_11810901 | 3300004448 | Marine | MERVVSSMTNNWTCSNCGCVHWDELVPISCIMCNNDIFHDSPDKFYQKDFETQTNYVKEKENEDS* |
Ga0066224_105825113 | 3300004457 | Marine | MANNWTCSNCGCVHWDELVPISCIMCDNGTFHDSPDKFYQKETNYIKDKKDD* |
Ga0066224_10935781 | 3300004457 | Marine | MEGFVSSMTTNWTCSNCGCVHWDGIKPISCIMCDNDEFLDGPEKFYNKTLNKQTNYIKDKKDD* |
Ga0066224_13333152 | 3300004457 | Marine | MANNWTCSNCGCVHWDELVPISCIMCDNGTFHDSPDKFYKKDFETQTNYVKEKKDEDS* |
Ga0075441_100073921 | 3300006164 | Marine | MEGVVSSMTNNWTCSNCGCVHWDELVPISCIMCNNDIFHDTPDKFYQKDFETQ |
Ga0075441_100704785 | 3300006164 | Marine | SNCGCVHWDELVPISCIMCNNDIFHDTPDKFYQKDFETQTNYVKDKEDD* |
Ga0075443_102123024 | 3300006165 | Marine | CSNCGCVHWDGIKPISCIMCDNGEFLDGPEKYYKESFSKQTNYIKEKKDE* |
Ga0075448_100242103 | 3300006352 | Marine | MTIHWTCSNCGCVHWDGLKPISCIMCDNGEFLDGPEKYYKESFSKQTNYVKEKKDDKD* |
Ga0098035_10877912 | 3300006738 | Marine | MVNSYTCSRCGCVHWDELKPISCIMCDNGKFYDSPDDFYDKEKLSKQTNYVKETEDAKD* |
Ga0098035_11681623 | 3300006738 | Marine | MTNNWTCSSCGCVHWDEQEPISCIMCDNGTFYDSPDKFYEKELETQTNYVKEKKDGKD* |
Ga0098058_11088444 | 3300006750 | Marine | MVNSYTCSRCGCVHWDELKPISCIMCDNDIFYDSPDEFYDKEKLSKQTNYVKE |
Ga0098048_11238934 | 3300006752 | Marine | MVNSYTCSRCGCVHWDELKPISCIMCDNDIFYDSPDEFYDKEKLSKQTNYVKENEDAKD* |
Ga0098044_11228835 | 3300006754 | Marine | MTNNWTCSSCGCVHWDEQEPISCIMCDNGTFYDSPDKFYEKELEIQTNYVKEKKDGKD* |
Ga0098054_11495314 | 3300006789 | Marine | MMVNSYTCSRCGCVHWDELKPISCIMCDNGEFYDSPDEFYDKGKLSKQTNYVKEKKDAED |
Ga0098054_12952273 | 3300006789 | Marine | CGCVHWDEQEPISCIMCDNGTFYDSPDKFYEKELETQTNYVKEKKDGKD* |
Ga0070754_100247823 | 3300006810 | Aqueous | MTTNWTCSNCGCVHWDELEPISCIMCDNDTFYDSPDKFYQKKLDKQTNYVKEKDDGED* |
Ga0070748_11930852 | 3300006920 | Aqueous | MTTNWTCSNCGCVHWDGIKPISCIMCNNDEFLDGPEKFYTGKLDKQTNYVKEKDDGED* |
Ga0098057_11371293 | 3300006926 | Marine | LKKEMYQNQRRKKMTNNWTCSSCGCVHWDEQEPISCIMCDNGTFYDSPDKFYEKELETQTNYVKEKKDGKD* |
Ga0098036_10068152 | 3300006929 | Marine | MTNSYTCSRCGCVHWDELEPISCIMCDNGTFYDSPDKFYQKELETQTNYVKETDDAKD* |
Ga0098036_10439545 | 3300006929 | Marine | SRCGCVHWDELKPISCIMCDNDIFYDSPDEFYDKEKLSKQTNYVKETEDAKD* |
Ga0075444_100513623 | 3300006947 | Marine | MTIHWTCSNCGCVHWDGIKPISCIMCDNGEFLDGPEKYYKKSFSKQTNYVKEKKDDKD* |
Ga0075444_100968754 | 3300006947 | Marine | MANNWTCSNCGCVHWDELVPISCIMCNNDIFHDTPDKFYQKDFETQTNYVKDKENEDS* |
Ga0075444_101774574 | 3300006947 | Marine | MEGVVSSMTNNWTCSNCGCVHWDELVPISCIMCNNDIFHDTPDKFYQKDLETQTNYIKDKEDD* |
Ga0114996_101144538 | 3300009173 | Marine | MTIHWTCSNCGCVHWDGLKPISCIMCDNDEFLDGPEKYYKESFSKQTNYIKEKKDE* |
Ga0114998_100512521 | 3300009422 | Marine | GCVHWDGVKPISCIMCDNDEFLDGPEKFYNKKTNYIKDKKDD* |
Ga0114997_102993723 | 3300009425 | Marine | MTNNWTCSNCGCVHWDELVPISCIMCDNDIFHDSPDKFYQKDFETQTNYVKDKENEDS* |
Ga0114997_107580951 | 3300009425 | Marine | MANNWTCSNCGCVHWDELVPISCIMCDNDIFHDSPDKFYQKDFETQTNYVKDKENEDS* |
Ga0114915_11398341 | 3300009428 | Deep Ocean | CSNCGCVHWDELVPISCIMCNNDIFHDTPDKFYQKDFETQTNYVKDKEDEE* |
Ga0115003_109412901 | 3300009512 | Marine | KMTTNWTCSNCGCVHWDGVKPISCIMCDNDEFLDGPEKFYNKKTNYIKDKKDD* |
Ga0114914_10493532 | 3300009601 | Deep Ocean | MTNNWTCSNCGCVHWDELVPISCIMCNNDIFHDTPDKFYQKDFETQTNYVKDKENEDS* |
Ga0114999_104649121 | 3300009786 | Marine | SFHLVRRKMMANNWTCSNCGCVHWDELVPISCIMCDNDIFHDSPDKFYQKDFETQTNYVKDKENEDS* |
Ga0098047_103852311 | 3300010155 | Marine | KMTNNWTCSSCGCVHWDEQEPISCIMCDNGTFYDSPDKFYEKELETQTNYVKEKKDGKD* |
Ga0181420_12195281 | 3300017757 | Seawater | TTNWTCSNCGCVHWDGIKPISCIMCNNDEFLDGPEKFYTGKLDKQTNYVKEKDDGED |
Ga0181430_12216192 | 3300017772 | Seawater | MTTNWTCSNCGCVHWDGIKPISCIMCDNDEFMDGPEKYYKEKKDNQINYLKEKDK |
Ga0181394_11837442 | 3300017776 | Seawater | MTTNWTYSNCGCVHWDELEPISCIMCDNDTFYDSPDKFYQKKLDKQTNYVKEKDDGED |
Ga0196887_10514403 | 3300022178 | Aqueous | MTTNWTCSNCGCVHWDGIKPISCIMCNNDEFLDGPEKFYTGKLDKQTNYVKEKDDGED |
(restricted) Ga0255049_103849352 | 3300024517 | Seawater | MTTNWTCSNCGCVHWDGLKPISCIMCNNDEFLDGPEKYYIGKLDKQTNYVKEKDDGED |
(restricted) Ga0255048_101685941 | 3300024518 | Seawater | MTTNWTCSNCGCVHWDGLKPISCIMCDNDEFLDGPEKYYKEDLSKQTNYIKEKKDDKD |
(restricted) Ga0255047_102067391 | 3300024520 | Seawater | SNCGCVHWDGLKPISCIMCDNGEFLDGPEKYYKESFSKQTNYVKEKKDE |
(restricted) Ga0255047_106034732 | 3300024520 | Seawater | MTIHWTCSNCGCVHWDGLKPISCIMCDNGEFLDGPEKYYKESFSKQTNYIKEK |
Ga0207906_10289183 | 3300025052 | Marine | MTTNWTCSNCGCVHWDGLKPISCIMCDNDEFLDGPEKYYKEDLSKQTNYVKEKKDDKD |
Ga0207906_10462432 | 3300025052 | Marine | MTIHWTCSNCGCVHWDGLKPISCIMCDNGEFLDGPEKYYKESFSKQTNYVKEKEDETTKD |
Ga0208012_10359254 | 3300025066 | Marine | MVNSYTCSRCGCVHWDELKPISCIMCDNDIFYDSPDEFYDKEKLSKQTNYVKENEDAKD |
Ga0207887_10298004 | 3300025069 | Marine | SNCGCVHWDGLKPISCIMCDNDEFLDGPEKYYKESFSKQTNYVKEKEDDKD |
Ga0207887_10328311 | 3300025069 | Marine | MTIHWTCSNCGCVHWDGLKPISCIMCDNDEFLDGPEKYYKESFSKQTNYIKEKKDD |
Ga0207896_10102253 | 3300025071 | Marine | MTNNWTCSNCGCVHWDELQPISCIMCNNDTFYDSPDKFYQKDLETQTNYVKDKENEDS |
Ga0207896_10169926 | 3300025071 | Marine | IHWTCSNCGCVHWDGLKPISCIMCDNDEFLDGPEKYYKESFSKQTNYVKEKKDDKD |
Ga0207890_10460322 | 3300025079 | Marine | MTNNWTCSNCGCVHWDELQPISCIMCNNDTFYDSPDKFYQKDLETQ |
Ga0208553_11468812 | 3300025109 | Marine | MTNNWTCSSCGCVHWDEQEPISCIMCDNGTFYDSPDKFYEKELETQTNYVKEKKDGKD |
Ga0209349_10380163 | 3300025112 | Marine | MVNNYTCSRCGCVHWDELKPISCIMCDNGEFYDSPDDFYDKEKLSKQTNYVKEKKDAED |
Ga0209349_10397275 | 3300025112 | Marine | MVNSYTCSRCGCVHWDELKPISCIMCDNGEFYDSPDEFYDKEKLSKQTNYVKETDDAED |
Ga0208433_10871625 | 3300025114 | Marine | MTNNWTCSSCGCVHWDEQEPISCIMCDNGTFYDSPDKFYEKELETQTNYVKEKKDGK |
Ga0209535_100921911 | 3300025120 | Marine | MTTNWTCSNCGCVHWDGIKPISCIMCNNDEFLDGPEKYYTGKLDKQTNYIKEKKDE |
Ga0209644_10047799 | 3300025125 | Marine | MTTNWTCSNCGCVHWDGLKPISCIMCDNDEFLDGPEKYYKESFSKQTNYVKEKKDGKD |
Ga0208919_100859811 | 3300025128 | Marine | MTNSYTCSRCGCVHWDELEPISCIMCDNGTFYDSPDKFYQKELETQTNYVKETDDAKD |
Ga0209128_10749466 | 3300025131 | Marine | MVNSYTCSRCGCVHWDELKPISCIMCDNGEFYDSPDEFYDKGKLSKQTNYVKEKKDVED |
Ga0209128_11477862 | 3300025131 | Marine | MTTNWTCSNCGCVHWDGIKPISCIMCNNDVFLDGPEKFYSTKKILNQKETDDDKD |
Ga0209128_11906642 | 3300025131 | Marine | MTNNYTCSRCGCVHWDELKPISCIMCDNGEFYDSPDDFYDKEKLSKQTNYVKEKKDAED |
Ga0209232_11133014 | 3300025132 | Marine | MVNSYTCSRCGCVHWDELEPISCIMCDNGTFYDSPDKFYQKELETQTNYVKETDDAKD |
Ga0209336_100326846 | 3300025137 | Marine | MTNNWTCSNCGCVHWDELQPISCIMCNNDTFYDSPDKFYQKDLETQTNYVKDKEDEE |
Ga0209336_100703581 | 3300025137 | Marine | RRKKMTNNWTCSNCGCVHWDELQPISCIMCNNDTFYDSPDKFYQKDLETQTNYVKDKENEDS |
Ga0209756_11043395 | 3300025141 | Marine | TNWTCSNCGCVHWDGIKPISCIMCNNDVFLDGPEKFYKNNLDKQTNYVKETDDDKD |
Ga0209756_11204962 | 3300025141 | Marine | MVNSYTCSRCGCVHWDELKPISCIMCDNGEFYDSPDEFYDKGKLSKQTNYVKETDDAED |
Ga0209337_100172421 | 3300025168 | Marine | MTTNWTCSNCGCVHWDGLKPISCIMCNNDEFLDGPEKFYTGKLDKQTNYVKEKDNGED |
Ga0209337_10833784 | 3300025168 | Marine | MTVNWTCSNCGCVHWDGLKPISCIMCDNDEFLDGPEKYYKESFSKQTNYVKEKKDDKD |
Ga0209337_10969565 | 3300025168 | Marine | MTTNWTCSNCGCVHWDGIKPISCIMCNNDEFLDGPEKYYTGKLDKQTNYVKEKDDGED |
Ga0209337_12754894 | 3300025168 | Marine | MTTNWTCSNCGCVHWDGIKPISCIMCDNDEFLDGPEKYYTGKLDKQTNYVKEKDDGED |
Ga0208032_10322134 | 3300025266 | Deep Ocean | MANNWTCSNCGCVHWDELVPISCIMCNNDIFHDTPDKFYQKDFETQTNYVKDKEDEDS |
Ga0208032_10805593 | 3300025266 | Deep Ocean | MTIHWTCSNCGCVHWDGLKPISCIMCDNGEFLDGPEKYYKKSFSKQTNYVKEKKDDKD |
Ga0208134_10922063 | 3300025652 | Aqueous | MTTNWTCSNCGCVHWDELEPISCIMCDNDTFYDSPDKFYQKKLDKQTNYVKEKDDGED |
Ga0209757_1000122713 | 3300025873 | Marine | MTVNWTCSNCGCVHWDGLKPISCIMCDNDEFLDGPEKYYKESFSKQTNYVKEKEDDKD |
Ga0209482_11492404 | 3300027668 | Marine | WTCSNCGCVHWDELVPISCIMCNNDIFHDTPDKFYQKDFETQTNYVKDKENEDS |
Ga0209816_10987544 | 3300027704 | Marine | MANNWTCSNCGCVHWDELVPISCIMCDNDIFHDTPDKFYQKDFETQTNYVKDKENEDS |
Ga0209816_11680203 | 3300027704 | Marine | MTIHWTCSNCGCVHWDGLKPISCIMCDNGEFLDGPEKYYKESFSKQTNYVKEKKDDKD |
Ga0209815_10187419 | 3300027714 | Marine | MEGVVSSMTNNWTCSNCGCVHWDELVPISCIMCNNDIFHDTPDKFYQKDFETQTNYVKDKEDD |
Ga0209815_11065991 | 3300027714 | Marine | MANNWTCSNCGCVHWDELVPISCIMCDNDIFHDTPDKFYQKDFETQTNYVKD |
Ga0209279_102730031 | 3300027771 | Marine | MANNWTCSNCGCVHWDELVPISCIMCNNDIFHDTPDKFYQKDFETQTNYVKDKE |
Ga0209709_102673692 | 3300027779 | Marine | MTNNWTCSNCGCVHWDELVPISCIMCDNDIFHDSPDKFYQKDFETQTNYVKDKENEDS |
Ga0209830_100186382 | 3300027791 | Marine | MKKMTTNWTCSNCGCVHWDGVKPISCIMCDNDEFLDGPEKFYNKKTNYIKDKKDD |
Ga0209302_104098672 | 3300027810 | Marine | MANNWTCSNCGCVHWDELVPISCIMCDNGTFHDSPDKFYKKDFETQTNYVKDKENEDS |
Ga0209089_100377264 | 3300027838 | Marine | MTIHWTCSNCGCVHWDGLKPISCIMCDNDEFLDGPEKYYKESFSKQTNYIKEKKDE |
Ga0209501_100411025 | 3300027844 | Marine | MTIHWTCSNCGCVHWDGLKPISCIMCDNGEFLDGPEKYYKESFSKQTNYVKEKKDE |
Ga0256382_10692174 | 3300028022 | Seawater | MMNSWTCSRCGCVHWDELEPISCIMCDNGTFYDSPDKFYQKELETQTNYVKETDDAKD |
Ga0256368_10137684 | 3300028125 | Sea-Ice Brine | MTTNWTCSNCGCVHWDGIKPISCIMCDNDEFLDGPEKFYNKQTNYIKDKKDD |
Ga0307488_100064528 | 3300031519 | Sackhole Brine | MANNWTCSNCGCVHWDELVPISCIMCDNDIFHDSPDKFYKKDFETQTNYVKDKENEDS |
Ga0307488_100503837 | 3300031519 | Sackhole Brine | MEGVVSSMTNNWTCSNCGCVHWDELVPISCIMCNNDIFHDSPDKFYQKDLETQTNYIKDKENEDS |
Ga0307488_100746293 | 3300031519 | Sackhole Brine | MANNWTCSNCGCVHWEELVPISCIMCDNGTFHDSPDKFYKKDFETQTNYVKDKENEDS |
Ga0302121_100611213 | 3300031626 | Marine | MTTNWTCSNCGCVHWDGVKPISCIMCDNDEFLDGPEKFYNKKTNYIKDKKDD |
Ga0308008_10894171 | 3300031687 | Marine | MANNWTCSNCGCVHWDELVPISCIMCDNDIFHDTPDKFYQKDFETQTNYVKDKENE |
Ga0314858_110335_158_334 | 3300033742 | Sea-Ice Brine | MTIHWTCSNCGCVHWDGLKPISCIMCDNDEFLDGPEKYYKKSFSKQTNYVKEKEDDKD |
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