Basic Information | |
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Family ID | F101904 |
Family Type | Metagenome |
Number of Sequences | 102 |
Average Sequence Length | 60 residues |
Representative Sequence | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV |
Number of Associated Samples | 66 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 12.75 % |
% of genes near scaffold ends (potentially truncated) | 42.16 % |
% of genes from short scaffolds (< 2000 bps) | 87.25 % |
Associated GOLD sequencing projects | 57 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (71.569 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (46.078 % of family members) |
Environment Ontology (ENVO) | Unclassified (60.784 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (77.451 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 25.81% β-sheet: 45.16% Coil/Unstructured: 29.03% |
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Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Deep Ocean Seawater Sackhole Brine Marine Marine Estuarine Marine Marine Estuarine Freshwater And Marine |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
SI48aug10_10mDRAFT_10235961 | 3300000207 | Marine | MRNLQVHYTYKTKNATVQDHCIVQSKTTRFSKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV* |
SI34jun09_10mDRAFT_10226173 | 3300000224 | Marine | MRNLKVYYTYKTKNATVQDQCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC* |
NpDRAFT_100352341 | 3300000929 | Freshwater And Marine | MQNLQVHYTYKTQNAVVADLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHF |
JGI26079J46598_10268524 | 3300003216 | Marine | MQNLQVHYTYKTQNAVVADLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC* |
Ga0066611_102137992 | 3300004277 | Marine | YTYKTQNAVVADLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVV* |
Ga0066605_102676872 | 3300004279 | Marine | MRNLQVHYTYKTKNATVQDHCIVQSKTTRFSKTQQLNTQLKLATQLNLKHFYAVTLTHYSVI* |
Ga0065861_10529285 | 3300004448 | Marine | MQNLQVHYTYKTKNALVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC* |
Ga0066224_10628121 | 3300004457 | Marine | MQNLQVHYTYKTKNALVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYA |
Ga0066223_10199911 | 3300004461 | Marine | TYKTKNALVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC* |
Ga0070743_101558113 | 3300005941 | Estuarine | MRNLKVYYTYKTQNAVVADQCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC* |
Ga0075441_100393105 | 3300006164 | Marine | MQNLQVHYTYKTKNATVADLCIVQSKTKRFTKTQQLNTQLKLAKLLNLKHFYAVTLTHYSVV* |
Ga0075441_102613311 | 3300006164 | Marine | KKIMRNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVV* |
Ga0075446_101527291 | 3300006190 | Marine | MRNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVV* |
Ga0075445_101523472 | 3300006193 | Marine | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYIVV* |
Ga0075444_102529862 | 3300006947 | Marine | MQNLQVHYTYKTKNATVADLCIVQSKTKRFTKTQQLNTQLKLAKLLNLKHFYAVTLTHYIVV* |
Ga0102880_11306701 | 3300007550 | Estuarine | KIMRNLQVHYTYKTKNATVQDHCIVQSKTTRFSKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV* |
Ga0102820_10620201 | 3300007554 | Estuarine | KVYYTYKTQNAVVADQCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC* |
Ga0102908_11090542 | 3300007665 | Estuarine | MQNLQVHYTYKTQNAVVADLCIVQSKTERFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC* |
Ga0114916_10336611 | 3300008221 | Deep Ocean | MRNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYIVV* |
Ga0102887_10749022 | 3300008961 | Estuarine | MRNLQVHYTYKTKNALVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVV* |
Ga0102830_11089981 | 3300009059 | Estuarine | MRNLKVYYTYKTQNAVIADQCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV* |
Ga0102815_105145251 | 3300009080 | Estuarine | MQNLQVHYTYKTQNAVVADLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYS |
Ga0114995_100991691 | 3300009172 | Marine | SKKIMQNLQVHYTYKTKNAIVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC* |
Ga0114995_102500791 | 3300009172 | Marine | TKNAVVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC* |
Ga0114995_103139692 | 3300009172 | Marine | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC* |
Ga0114995_105756662 | 3300009172 | Marine | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC* |
Ga0114995_106162571 | 3300009172 | Marine | MRNLQVHYTYKTQNATVADLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVV* |
Ga0114995_107562141 | 3300009172 | Marine | MQNLQVHYTYKTKNAIVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV* |
Ga0114993_109082032 | 3300009409 | Marine | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV* |
Ga0114994_111444112 | 3300009420 | Marine | MQNLQVHYTYKTKNAIVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTL |
Ga0114915_11329481 | 3300009428 | Deep Ocean | KTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFNAVTLTHYIVV* |
Ga0115005_108807162 | 3300009432 | Marine | MQNLQVHYTYKTKNATVADLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV* |
Ga0115008_111785931 | 3300009436 | Marine | MRNLKVYYTYKTKNAIVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC* |
Ga0115008_112770431 | 3300009436 | Marine | TKNATVQDQCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC* |
Ga0115007_108420841 | 3300009441 | Marine | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTL |
Ga0115003_103089211 | 3300009512 | Marine | LTNKVKKIMQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC* |
Ga0115003_106334581 | 3300009512 | Marine | MQNLQVHYTYKTKNAVVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC* |
Ga0115004_103663922 | 3300009526 | Marine | MQTLQVHFTYKTKNATVQDLCIVKSKTKRFTKTQQLNTQLKLATQLNLKHF |
Ga0115006_117868641 | 3300009544 | Marine | MQNLQVHYTYKTKNALVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVV* |
Ga0115000_108821791 | 3300009705 | Marine | MQNLQVHYTYKTKNAIISDLCVVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVV* |
Ga0115002_101799863 | 3300009706 | Marine | MRNLKVYYTYKTKNAIVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV* |
Ga0115002_111095132 | 3300009706 | Marine | KKIMQNLQVHYTYKTKNALVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC* |
Ga0115001_107335411 | 3300009785 | Marine | IMQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC* |
Ga0134293_10407692 | 3300014973 | Marine | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVI* |
(restricted) Ga0233432_100210086 | 3300023109 | Seawater | MRNLQVHYTYKTKNATVQDHCIVQSKTTRFSKTQQLNTQLKLATQLNLKHFYAVTLTHYSVI |
(restricted) Ga0233432_100663395 | 3300023109 | Seawater | MQNLQVHYTYKTQNAVVADLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC |
Ga0244775_103158432 | 3300024346 | Estuarine | MRNLKVYYTYKTQNAVVADQCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC |
Ga0244775_115260422 | 3300024346 | Estuarine | MRNLKVYYTYKTKNATVQDQCIVQSKTTRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC |
Ga0208814_10154098 | 3300025276 | Deep Ocean | YKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFNAVTLTHYIVV |
Ga0208814_10160443 | 3300025276 | Deep Ocean | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYIVV |
Ga0208814_10760173 | 3300025276 | Deep Ocean | MRNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVV |
Ga0209557_10258184 | 3300025483 | Marine | MRNLQVHYTYKTKNATVQDHCIVQSKTTRFSKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV |
Ga0208803_10753251 | 3300027232 | Estuarine | MQNLQVHYTYKTKNATVQDQCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYA |
Ga0207994_10637181 | 3300027416 | Estuarine | MRNLQVHYTYKTKNATVQDHCIVQSKTTRFSKTQQLNTQLKLATQLNLKHFYAVTLTH |
Ga0209037_10831873 | 3300027612 | Marine | MRNLQVHYTYKTKNATVQDHCIVQSKTTRFSKTQQLNTQLKLATQLNLKHFYAVT |
Ga0209482_10563994 | 3300027668 | Marine | MQNLQVHYTYKTKNATVADLCIVQSKTKRFTKTQQLNTQLKLAKLLNLKHFYAVTLTHYSVV |
Ga0209071_11786152 | 3300027686 | Marine | YKLKKGQTMQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYIVV |
Ga0209192_100583115 | 3300027752 | Marine | MRNLQVHYTYKTQNATVADLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVV |
Ga0209192_100617485 | 3300027752 | Marine | MQNLQVHYTYKTKNAVVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC |
Ga0209192_101973402 | 3300027752 | Marine | MQNLQVHYTYKTKNAIVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV |
Ga0208305_100620224 | 3300027753 | Estuarine | TQNAVVADLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC |
Ga0208305_100701972 | 3300027753 | Estuarine | MRNLKVYYTYKTQNAVIADQCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC |
Ga0209709_100498843 | 3300027779 | Marine | MQNLQVHYTYKTKNALVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC |
Ga0209502_101826681 | 3300027780 | Marine | TYKTKNAIVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV |
Ga0209502_102429953 | 3300027780 | Marine | MQNLQVHYTYKTKNAVVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC |
Ga0209502_103394542 | 3300027780 | Marine | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLT |
Ga0209711_100747171 | 3300027788 | Marine | MRNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC |
Ga0209711_102509362 | 3300027788 | Marine | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC |
Ga0209711_102729601 | 3300027788 | Marine | KKIMQNLQVHYTYKTKNAIISDLCVVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVV |
Ga0209091_103712631 | 3300027801 | Marine | MRNLKVYYTYKTKNAIVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC |
Ga0209091_104903772 | 3300027801 | Marine | MQNLQVHYTYKTKNAIISDLCVVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVV |
Ga0209302_100241111 | 3300027810 | Marine | YTYKTKNAIVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV |
Ga0209302_100408576 | 3300027810 | Marine | MQTLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV |
Ga0209302_100420914 | 3300027810 | Marine | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV |
Ga0209302_101662543 | 3300027810 | Marine | MQNLQVHYTYKTKNATVADLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV |
Ga0209092_1000192923 | 3300027833 | Marine | MQNLQVHYTYKTKNAVVADLCIVQSKTKRFTKTQQLNTQLKLAKLLNLKHFYAVTLTHYSVC |
Ga0209092_1000593816 | 3300027833 | Marine | MRNLQVHYTYKTQNAVVADLCIVQSKTTRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC |
Ga0209092_100816941 | 3300027833 | Marine | KTKNATVQDQCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC |
Ga0209092_100936814 | 3300027833 | Marine | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVI |
Ga0209092_105499991 | 3300027833 | Marine | YTYKTKNALVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC |
Ga0209089_105539162 | 3300027838 | Marine | MQNLQVHYTYKTKNAIVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVV |
Ga0308021_102759583 | 3300031141 | Marine | KTKNATVADLCIVQSKTKRFTKTQQLNTQLKLAKLLNLKHFYAVTLTHYSVV |
Ga0308025_10652902 | 3300031143 | Marine | MQNLQVHYTYKTKNAVVQDLCIVQSKTKRFTKTQQLNTQLKLAKLLNLKHFYAVTLTHYSVC |
Ga0307488_100817215 | 3300031519 | Sackhole Brine | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC |
Ga0307488_102977443 | 3300031519 | Sackhole Brine | MRNLKVYYTYKTQNAVVADQCIVQSKTTRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVV |
Ga0307488_103614591 | 3300031519 | Sackhole Brine | MQNLQVHYTYKTKNATVSDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV |
Ga0307488_104498502 | 3300031519 | Sackhole Brine | MQTLQVHFTYKTKNATVSDFCVVQSKTKRFTQLAQFNTMHKIAAALNLKHFYNVTLTHYNVCK |
Ga0307488_105188773 | 3300031519 | Sackhole Brine | INKQSKKIMRNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV |
Ga0307488_106478372 | 3300031519 | Sackhole Brine | MKTLQVHFTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV |
Ga0307488_107065302 | 3300031519 | Sackhole Brine | MKNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV |
Ga0307489_108467342 | 3300031569 | Sackhole Brine | MQNLKVYYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVC |
Ga0307489_111145772 | 3300031569 | Sackhole Brine | MQTLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTH |
Ga0302131_11443913 | 3300031594 | Marine | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTL |
Ga0308007_103003262 | 3300031599 | Marine | GKNMQNLQVHYTYKTKNAVVQDLCIVQSKTKRFTKTQQLNTQLKLAKLLNLKHFYAVTLTHYSVC |
Ga0307999_10732981 | 3300031608 | Marine | YKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYIVV |
Ga0302138_102710782 | 3300031637 | Marine | SKKIMQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSVC |
Ga0302136_10429891 | 3300031676 | Marine | QNLQVHYTYKTKNAVVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSV |
Ga0302136_11579931 | 3300031676 | Marine | QNLQVHYTYKTKNAVVQDLCIVQSKTKRFTKTQQLNTQLKLAKQLNLKHFYAVTLTHYSV |
Ga0308006_1000335018 | 3300031683 | Marine | KGQTMQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYIVV |
Ga0302130_10607751 | 3300031700 | Marine | MQTLQVHFTYKTKNATVQDLCIVKSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHYSVV |
Ga0307997_101433861 | 3300031706 | Marine | MQNLQVHYTYKTKNAVVQDLCIVQSKTKRFTKTQQLNTQLKLATQLNLKHFYAVTLTHY |
Ga0308013_102652181 | 3300031721 | Marine | MQNLQVHYTYKTKNATVQDLCIVQSKTKRFTKTQQLNTQLKLAKLLNLKHFYAVTLTHY |
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