Basic Information | |
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Family ID | F101902 |
Family Type | Metagenome |
Number of Sequences | 102 |
Average Sequence Length | 59 residues |
Representative Sequence | MRVGNLVKRRDDHAHHGIVVEVGPQETAIDHGSTVAKVQWNDGDLTCEFIKMLEVLSEGR |
Number of Associated Samples | 69 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 78.00 % |
% of genes near scaffold ends (potentially truncated) | 24.51 % |
% of genes from short scaffolds (< 2000 bps) | 72.55 % |
Associated GOLD sequencing projects | 59 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.23 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (50.000 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (57.843 % of family members) |
Environment Ontology (ENVO) | Unclassified (92.157 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (91.176 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 15.91% Coil/Unstructured: 84.09% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.23 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Seawater Marine Aqueous Sackhole Brine Freshwater To Marine Saline Gradient Marine Seawater Marine Seawater Marine Seawater |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSpr2010_102027094 | 3300000116 | Marine | MRVGNLVKRRDDHAHHGIVVEVGPQETATDHGSTVAKVQWNDGDLTCEFI |
JGI24006J15134_101063704 | 3300001450 | Marine | MRVGNLVKRRDDHTHNGIVIEVAPIETRIDHGDNVCRVQWNDGDVSFEFLKMLEVLSEGR |
JGI25129J35166_100040510 | 3300002484 | Marine | MKVGNLVKRRDDXVHHGIVVEMGPQETAIDHGVLTVAKVQWNDGDLTCEFIKMLEVLSESG* |
JGI25133J35611_100888783 | 3300002514 | Marine | VKVGDLAKRRDDPTYHGIVVEVGPQETATDHGETVVRVQWNDGEVSYEFVKMLEVLSEGR |
JGI25130J35507_10634511 | 3300002519 | Marine | VKVGDLVKRRDDPTYHGIVVEVGPQETVTDHGKTVVRVQWNDGEVSYEFVKML |
Ga0066851_100129812 | 3300005427 | Marine | MKVGDLVKRRDDPTYHGIVVEVGPQETATDHGETVVRVQWNDGEVSYEFVKMLEVLSESR |
Ga0066837_100748326 | 3300005593 | Marine | MKVGNLVKRRDDNVHHGIVVEMGPQETAIDHGVLTVAKVQWNDGDLTCEFIKMLEVLSESG* |
Ga0075441_1004074810 | 3300006164 | Marine | VKRRDDHIHRGIVMMVGPQETAIDHGKTVVKVQWFDGDLTFEFIKLLEVVSEAG* |
Ga0098033_11588932 | 3300006736 | Marine | MKVGDLVKRRDDPTYHGIVVEVGPQETATDHGETVVRAQWNDGEVSYEFVKMLEVLSEGR |
Ga0098040_10727164 | 3300006751 | Marine | MEVGNLVKRRDDHVHHGIVVEVGPQETAVDHDNRVATVQWSDGEMTFEFIKMLEVLSEGR |
Ga0098039_11042952 | 3300006753 | Marine | MYMKVGNLVKRRDDHAHHGLVVEVAPPETAIDHGNTVARIQWNDGDMTCEFIKMLEVISEGR* |
Ga0098054_11763821 | 3300006789 | Marine | RRDDPTYHGIVVEVGPQETATDHGETVVRVQWNDGEVSYEFVKMLEVLSEGR* |
Ga0075468_1001421212 | 3300007229 | Aqueous | MKVGNLVKRRDDHFHRGIVVEVGPNETATDHQMSCAKIRWGDGELTIEFIKLLEVISEAR |
Ga0070747_12958032 | 3300007276 | Aqueous | VRVGNLVKRRDDHAHHGIVVEVGPQETALDHGGTVAKVQWNDGDLTCEFIKMLEVLSEGR |
Ga0105013_102022922 | 3300007510 | Marine | MKVGNLVKRRDDHIHHGIVVEVGPQETAIDHGNRVARIQWNDGDMTYEFIKMLEVLSEGG |
Ga0114996_101377381 | 3300009173 | Marine | MKVGNLVKRRDDHIHHGIVVEVGPQETAIDHGNHVARVQWTDGDLTFEFIKMLEV |
Ga0114993_100920718 | 3300009409 | Marine | MKVGNLVKRRDDHVHHGIVVEVGPQETAIDHGNHVARVQWTDGDLTFEFIKMLEVLSEGR |
Ga0114997_100885497 | 3300009425 | Marine | MMRVGNLVKRRDDHIHHGIVVEVGPQETAIDHGSTVAKVQWNDGDLTCEFIKMLEVLSEGR* |
Ga0114997_101103575 | 3300009425 | Marine | VKIGNLVKRRDDHVHHGIVMELGPSAAATCRDDVVKVQWNDGDLTCEFIKILEVLSEGR* |
Ga0114997_102079964 | 3300009425 | Marine | VKRRDDHIHHGIVVEVGPQETAIDHGNHVARVQWTDGDLTFEFIKMLEVLSECR* |
Ga0114997_103111174 | 3300009425 | Marine | MKVGNLVKRRDDHIHHGIVVEVGPQETAIDHGNHVARVQWTDGDLTFEFIKMLEVLSEGR |
Ga0114997_107325342 | 3300009425 | Marine | MEYSVKVGNLVKRRDDHIHHGIVMELGPAVTAIDHGNTVVKIRWNDGDLTCEFIKMLEVISESR* |
Ga0115003_104851922 | 3300009512 | Marine | MKVGNLVKRRDDHLHHGIVVEVGPQETAIDHGNNVSKVQWNDGDLTCEFTRLLEVISESG |
Ga0115003_106079283 | 3300009512 | Marine | MEYSVKVGNLVKRRDDHIHHGIVMELGPAVAAIDHGNTVVKIRWNDGDLTCEFIKMLEV |
Ga0115004_107164751 | 3300009526 | Marine | KVGNLVKRRDDHIHHGIVMELGPAVAAIDHGNTVVKIRWNDGDLTCEFIKMLEVISESR* |
Ga0115000_100850943 | 3300009705 | Marine | MMKVGSLVKRRDDHIHHGIVVEVGPQETAIDHGNHVARVQWTDGDLTFEFIKMLEVLSECR* |
Ga0115000_103966282 | 3300009705 | Marine | MIKVGNLVKRRDDHIHHGIVVEVGPQETAIDHGNHVARVQWTDGDLTFEFIKMLEVLSEGR* |
Ga0115001_104681732 | 3300009785 | Marine | MEYSVKVGNLVKRRDDHIHHGIVMELGPAVAAIDHGNTVVKIRWNDGDLTCEFIKMLEVISESR* |
Ga0115001_108890882 | 3300009785 | Marine | MKVGNLVKRRDDHLHHGIVVEVGPQETAIDHGNQVARVQWNDGDLTCEFTRLLEVISESG |
Ga0098047_101116045 | 3300010155 | Marine | MYMKVGNLVKRRDDHVHHGIVVEVGPQETAIDHGNRVARIQWNDGDMTCEFIKMLEVLSEGR* |
Ga0098047_102114772 | 3300010155 | Marine | MEPARHTASVSWRSSVKVGDLAKRRDDPTYHGIVVEVGPQETATDHGETVVRVQWNDGEVSYEFVKMLEVLSEGR* |
Ga0133547_102467367 | 3300010883 | Marine | VKIGNLVKRRDDHVHHGIVMELGPSATATCRDDVVKVQWNDGDLTCEFIKILEVLSEGR* |
Ga0133547_117309183 | 3300010883 | Marine | MKVGNLVKRRDDHVHHGVVTEMAPIETRTDHGDNVCKVQWLDGDVSFEFLKMLEVLSESR |
Ga0133547_119090391 | 3300010883 | Marine | MKVGNLVKRRDDHIHHGIVVEVGPQETAIDHGNHVARVQWTDGDLTFEFIKMLEVLSE |
Ga0171655_11923263 | 3300013119 | Marine | MKVGNLVKRRDDHIHRGIVLMVGPNETAIDHGKTVAKVQWFDGDLTFEFIRLLEVVSESR |
Ga0134300_10606181 | 3300014818 | Marine | YVIGIERKKMMRAGDLVKRRDDHIHHGIVVEVGPQETAIDHGSTVAKVQWNDGDLTCEFIKMLEVLSEGR* |
Ga0134299_10437402 | 3300014959 | Marine | MRVGNLVKRRDDHIHHGIVVEVGPQETATDHGSTVAKVQWNDGDLTCEFIKMLEVLSEGR |
Ga0180120_103617632 | 3300017697 | Freshwater To Marine Saline Gradient | VRVGNLVKRRDDNAHHGIVVEVGPQGTALDHGGTVAKVQWNDGDLTCEFIKMLEVLSEGR |
Ga0181372_10123744 | 3300017705 | Marine | VKVGNLVKRRDDHVHHGIVVEVGPQETAIDHGNRVARIQWNDGDMTYEFIKMLEVLSEGG |
Ga0181377_10440402 | 3300017706 | Marine | MRVGNLVKRRDDHAHHGIVVEVGPQETAIDHGSTVAKVQWNDGDLTCEFVKMLEVLSESR |
Ga0181387_10617672 | 3300017709 | Seawater | MKIGNLVKRSDDHAHHGIVVEIGPQETAIDHGSTVAKVRWSDGDLTCEFIRRLEVLSEGR |
Ga0181415_10067625 | 3300017732 | Seawater | MRVGNLVKRRDDHAHHGIVVEVGPQETAIYHSATVAKVQWNDGDLTCEFIKILEVVSER |
Ga0181426_10600552 | 3300017733 | Seawater | MKVGSLVKRRDDHFHRGIVVEVGPNETATDHQMSCAKIRWGDGELTIEFIKLLEVISEAR |
Ga0181397_11264811 | 3300017744 | Seawater | MMKVGSLVKRRDDHFHRGIVVEVGPNETATDHQMSCAKIRWGDGELTIEFIKLLEV |
Ga0181407_10461775 | 3300017753 | Seawater | NLVKRRDDHAHHGIVVEVGPQETAIDHSATVAKVQWNDGDLTCEFIKILEVVSER |
Ga0181407_10608204 | 3300017753 | Seawater | HFHRGIVMEVGPAETATDHGATCAKVRWDDGDFSIEFVKLLEVLSESR |
Ga0181407_11798303 | 3300017753 | Seawater | KRRDDHAHHGIVVEVGPQETAIDHGSTVAKVQWNDGDLTCEFIKMLEVLSESR |
Ga0181409_10343505 | 3300017758 | Seawater | DHFHRGIVVEVGPNETATDHQMSCAKIRWGDGELTIEFIKLLEVISEAR |
Ga0181408_10916753 | 3300017760 | Seawater | MKVGNLVKRRDDHFHRGIVMEVGPAETATDHGATCAKVRWDDGDFSIEFVKLLEVLSESR |
Ga0181410_11396921 | 3300017763 | Seawater | RMMKVGSLVKRRDDHFHRGIVVEVGPNETATDHQMSCAKIRWGDGELTIEFIKLLEVISEAR |
Ga0181430_11582822 | 3300017772 | Seawater | MMKVGSLVKRRDDHFHRGIVVEVGPNETATDHQMSCAKIRWGDGELTIEFIKLLE |
Ga0181432_10514254 | 3300017775 | Seawater | VKVGNLVKRRDDHAHHGIVVEVGPQETATDHGNTVVRVQWNDGDVSFEFLKMLEVVSEGR |
Ga0181432_12104082 | 3300017775 | Seawater | VKVGNLVKRRDDHIHRGIVLMVGPNETAIDHGKTVAKVQWFDGDLTFEFIRLLEVVSENR |
Ga0181394_10549701 | 3300017776 | Seawater | LPRRKRGGDSRMMKVGSLVKRRDDHFHRGIVVEVGPNETATDHQMSCAKIRWGDGELTIEFIKLLEVISEAR |
Ga0181379_12264342 | 3300017783 | Seawater | MRVGNLVKRRDDHAHHGIVVEVGPQETAIDHSATVAKVQWNDGDLTCELIKILEVVSER |
Ga0206125_10000057152 | 3300020165 | Seawater | MRVGNLVKRRDDHVHHGIVVEVGPQETATDHGSTVAKVQWNDGDLTCEFIKMLEVLSEGR |
Ga0206125_1000216928 | 3300020165 | Seawater | MRVGNLVKRRDDHAHHGIVVEVGPQETAIDHGSTVAKVQWNDGDLTCEFIKMLEVLSESR |
Ga0206125_1002057818 | 3300020165 | Seawater | MKVGNLVKRRDDHFHRGIVMEIGPVETANDHQMSCAKIRWGDGELTIEFIKLLEVISEAR |
Ga0206125_100506556 | 3300020165 | Seawater | MRVGNLVKRRDDHTHHGIVVEVGPQETAIDHGSTVAKVQWNDGDLTCEFIKMLEVLSEGR |
Ga0211521_100269397 | 3300020428 | Marine | MKVGNLVKRSDDHAHHGIVVEVGPQETVTDHGRTVAKVQWNDGDLTCEFVKTLEVLSEGR |
Ga0211521_100593343 | 3300020428 | Marine | MRVGNLVKRRDDHVHHGIVVEVGPQETATDHGSTVAKVQWNDGDLTCEFIKMLEVLSEAV |
Ga0211521_101165026 | 3300020428 | Marine | MRVGNLVKRRDDHAHHGIVVEVGPQETATDHGSTVAKVQWNDGDLTCEFIKMLEVLSEGR |
Ga0211576_100221953 | 3300020438 | Marine | MRVGNLVKRRDDHAHHGIVVEVGPQETAIDHSATVAKVQWNDGDLTCEFIKILEVVSER |
Ga0211576_103372273 | 3300020438 | Marine | MMKVGSLVKRRDDHFHRGIVVEVGPNETATDHQMSCAKIRWGDGELTIEFIKLLEVISEA |
Ga0211473_102258993 | 3300020451 | Marine | MRVGSLVKRKDDHAHHGIVVEVGPQETVIDHGTSVAKVQWNDGDLTCEFIRMLEVLSEGR |
Ga0196887_11183931 | 3300022178 | Aqueous | MRVGNLVKRRDDHVHHGIVVEVGPQETATDHGSTVAKVQWNDGDLTCEFIKMLEVLSE |
(restricted) Ga0233428_11110702 | 3300022888 | Seawater | MKVGNLVKRRDDHIRHGIVVEVGPQETAIDHGNHVARVQWTDGDLTFEFIKMLEVLSEGR |
Ga0208156_10494354 | 3300025082 | Marine | VKLGDLVKRRDDPTYHGIVVEVGPQETVTDHGKTVVRVQWNDGEVSYEFVKMLEVLSESR |
Ga0208011_100228613 | 3300025096 | Marine | MKVGDLVKRRDDPTYHGIVTEVGPQETATDHGETVVRVQWNDGEVSYEFVKMLEVLSEGR |
Ga0209349_100037823 | 3300025112 | Marine | MKVGNLVKRRDDSVHHGIVVEMGPQETAIDHGVLTVAKVQWNDGDLTCEFIKMLEVLSES |
Ga0209349_10263098 | 3300025112 | Marine | VKVGDLVKRRDDPTYHGIVVEVGPQETATDHGETVVRVQWNDGEVSYEFVKMLEVLSEGR |
Ga0209349_10687612 | 3300025112 | Marine | MKVGNLVKRRDDHAHHGIVVEVGPQETATDHGNTVARIQWNDGDLTCEFIKMLEVLSESR |
Ga0209349_10822082 | 3300025112 | Marine | VKVGDLVKRRDDPTYHGIVVEVGPQETVTDHGKTVVRVQWNDGEVSYEFVKMLEVLSEGR |
Ga0208433_11325042 | 3300025114 | Marine | VKLGDLVKRRDDPTYHGIVVEVGPQETATDHGETVVRVQWNDGEVSYEFVKMLEVLSEGR |
Ga0208433_11660051 | 3300025114 | Marine | MKVGDLVKRRDDPTYHGIVTEVGPQETATDHGETVVRVQWNDGEVSYEFVKMLEVL |
Ga0209434_101890410 | 3300025122 | Marine | SVKVGDLAKRRDDPTYHGIVVEVGPQETATDHGETVVRVQWNDGEVSYEFVKMLEVLSEG |
Ga0208919_10244699 | 3300025128 | Marine | MRVGNLVKRRDDHAHHGIVVEVGPQETAIDHGSTVAKVQWNDGDLTCEFIKMLEVLSEGR |
Ga0209128_100390310 | 3300025131 | Marine | MKVGNLVKRRDDNVHHGIVVEMGPQETAIDHGVLTVAKVQWNDGDLTCEFIKMLEVLSES |
Ga0209128_11924612 | 3300025131 | Marine | RRDDHTHHGIVVEVGPRETALDHGGTVAKVQWNDGDLTCEFIKMLEVLSEGR |
Ga0209756_10170826 | 3300025141 | Marine | VKVGDLVKRRDDPTYHGIVVEVGPQETATDHGETVVRVQWNDGEVSYEFVKMLEVLSESR |
Ga0209756_10787661 | 3300025141 | Marine | MRVGNLVKRRDDHTHHGIVVEVGPRETALDHGGTVAKVQWNDGDLTCEFIKMLEVLSEGR |
Ga0209337_100009789 | 3300025168 | Marine | VKVGNLVKRRDDHRHHGIVIEVAPIETRIDHGDNVCRVEWSDGEVSFEFIKMLEVLSEGR |
Ga0209337_105832411 | 3300025168 | Marine | MRVGNLVKRRDDHAHNGIVIEVAPIETRIDHGDNVCRVQWNDGDVSFEFLKMLEV |
Ga0209337_10749057 | 3300025168 | Marine | RDDHTHNGIVIEVAPIETRIDHGDNVCRVQWNDGDVSFEFLKMLEVLSEGR |
Ga0209757_100276486 | 3300025873 | Marine | VKVGNLVKRRDDHAHHGIVVEVAPQETAIDHGNTVARIQWNDGDMTCEFIKMLEVLSEGR |
Ga0209757_102304703 | 3300025873 | Marine | VKVGNLVKRRDDHVHHGIVVEVGPQETAIDHGNTVARIQWNDGDVSFEFLKMLEVVSEGR |
Ga0208896_10259449 | 3300026259 | Marine | MKVGDLVKRRDDPTYHGIVVEVGPQETATDHGETVVRVQWNDGEVSYEFVKMLEVLSEGR |
Ga0209482_10901552 | 3300027668 | Marine | MKVSDIVKRRDDHIHRGIVMMVGPQETAIDHGKTVVKVQWFDGDLTFEFIKLLEVVSEAG |
Ga0209709_1000062160 | 3300027779 | Marine | MRVGSLVKRRDDHIHHGIVMEIGPPATATDHGKTVVKIQWNDGDLTCEFIKLLEVISESR |
Ga0209709_1000330023 | 3300027779 | Marine | MMRVGNLVKRRDDHIHHGIVVEVGPQETAIDHGSTVAKVQWNDGDLTCEFIKMLEVLSEG |
Ga0209709_101555094 | 3300027779 | Marine | RDDHIHHGIVVEVGPQETAIDHGNHVARVQWTDGDLTFEFIKMLEVLSECR |
Ga0209830_104414701 | 3300027791 | Marine | VKVGNLVKRRDDHIHHGIVMELGPAVAAIDHGNTVVKIRWNDGDLTCEFIKMLEVISESR |
Ga0209091_100839053 | 3300027801 | Marine | MMKVGSLVKRRDDHIHHGIVVEVGPQETAIDHGNHVARVQWTDGDLTFEFIKMLEVLSEC |
Ga0209091_102423212 | 3300027801 | Marine | MIKVGNLVKRRDDHIHHGIVVEVGPQETAIDHGNHVARVQWTDGDLTFEFIKMLEVLSEG |
Ga0307488_102624682 | 3300031519 | Sackhole Brine | MKVGNLVKRRDDHIHHGIVVEVGPQETAIDHGNNVSKVQWNDGDLTCEFTRLLEVISEIG |
Ga0302132_100661887 | 3300031605 | Marine | MKVGNLVKRRDDHVHQGIVVEVGPQETVIDHGNHVARVQWTDGDLTFEFIKMLEVLSEGR |
Ga0302132_103025833 | 3300031605 | Marine | VKVGNLVKRRDDHVHHGIVVELGPSATATCRADVVKVQWNDGDLTCEFIKILEVLSESR |
Ga0315326_103676572 | 3300031775 | Seawater | MRVGNLVKRRDDHTHHGIVVEVGPQETAIDHSSTVAKVQWNDGDLTCEFIKMLEVLSEGR |
Ga0315327_103834354 | 3300032032 | Seawater | VKVGNLVKRRDDHAHHGIVVEVGPQETAIDHGNHVVRVQWTDGDLTYEFIKMLEVLSEGG |
Ga0315315_114963361 | 3300032073 | Seawater | MRLGNLVKRRDDHAHHGIVVEVGPQETAIDHGASVAKVQWSDGDLTCEFIKMLEVISEGR |
Ga0315338_100387931 | 3300032138 | Seawater | VKVGNLVKRRDDHAHHGIVVEVGPQETAIDHGNHVVRVQWADGDLTYEFIKMLEVLSEGG |
Ga0315338_101557815 | 3300032138 | Seawater | VKVGNLVKRRDDHAHHGIVVEVGPQETAIDHGNHVARVQWTDGDLTYEFIKMLEVLSEGG |
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