NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F101834

Metagenome Family F101834

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F101834
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 91 residues
Representative Sequence AMGAKPEQVPDSSEIGGVKADGTSINASLGGEAGAAKIYWALVGQRVVVLTFFGPDKQMKQLAPGWDLIRTSLKVVDPKAVPAASPKPTP
Number of Associated Samples 79
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.98 %
% of genes near scaffold ends (potentially truncated) 94.12 %
% of genes from short scaffolds (< 2000 bps) 96.08 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (81.373 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(10.784 % of family members)
Environment Ontology (ENVO) Unclassified
(53.922 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(66.667 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120
1JGI11615J12901_102948741
2soilL1_100245223
3Ga0062593_1018056742
4Ga0062590_1012422852
5Ga0062590_1028687111
6Ga0063356_1026187402
7Ga0062592_1014626001
8Ga0062594_1014455191
9Ga0065705_110803912
10Ga0065707_101692563
11Ga0065707_110082612
12Ga0070676_104221693
13Ga0068869_1002646123
14Ga0068869_1007160202
15Ga0070680_1019290782
16Ga0070682_1000188291
17Ga0070675_1005436223
18Ga0070673_1010798441
19Ga0070703_102240072
20Ga0070672_1013499142
21Ga0070704_1005472383
22Ga0070704_1009071902
23Ga0070704_1022870692
24Ga0068857_1005609511
25Ga0068857_1005792523
26Ga0068854_1002049821
27Ga0070702_1002268531
28Ga0068859_1014413671
29Ga0068859_1017058721
30Ga0068859_1027966942
31Ga0068864_1007845681
32Ga0068864_1025071852
33Ga0068870_102075424
34Ga0068862_1011437881
35Ga0068862_1014822422
36Ga0082029_11706681
37Ga0079221_112592083
38Ga0075428_1019735181
39Ga0075425_1001576862
40Ga0075434_1010101521
41Ga0075424_1027731722
42Ga0079219_108574941
43Ga0079218_108075422
44Ga0079218_123127291
45Ga0105251_102158461
46Ga0111539_111718161
47Ga0075418_108141092
48Ga0111538_106168561
49Ga0105241_114412032
50Ga0105241_121334512
51Ga0105241_122244592
52Ga0105248_110652151
53Ga0105248_125707211
54Ga0105237_116484741
55Ga0105238_123493612
56Ga0126305_100751993
57Ga0126305_102250311
58Ga0126304_102266011
59Ga0126304_108838361
60Ga0126309_105788932
61Ga0126308_105799761
62Ga0126308_112831881
63Ga0126312_104744611
64Ga0126310_107165402
65Ga0126311_105152551
66Ga0126311_119280631
67Ga0134128_102402531
68Ga0134128_115944792
69Ga0134124_107264053
70Ga0134124_108111541
71Ga0134122_107863911
72Ga0105246_105884401
73Ga0150985_1073481201
74Ga0164304_116102921
75Ga0157371_104839991
76Ga0157371_106629902
77Ga0157378_122260012
78Ga0163162_122329442
79Ga0157372_109853201
80Ga0157375_123553762
81Ga0157375_125967032
82Ga0163163_108687531
83Ga0157377_111267042
84Ga0157376_121811652
85Ga0137409_112574252
86Ga0132257_1019110122
87Ga0132255_1050151231
88Ga0247669_10476841
89Ga0207654_111757691
90Ga0207695_115824492
91Ga0207671_114825712
92Ga0207681_110353672
93Ga0207709_107451261
94Ga0207691_109916472
95Ga0207676_101972124
96Ga0207674_104691011
97Ga0207674_122122202
98Ga0268265_118452131
99Ga0307416_1020198132
100Ga0307414_117591131
101Ga0307411_107314232
102Ga0373959_0100881_2_250
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.56%    β-sheet: 36.44%    Coil/Unstructured: 50.00%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090AMGAKPEQVPDSSEIGGVKADGTSINASLGGEAGAAKIYWALVGQRVVVLTFFGPDKQMKQLAPGWDLIRTSLKVVDPKAVPAASPKPTPSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
83.3%16.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Vadose Zone Soil
Terrestrial Soil
Serpentine Soil
Switchgrass Rhizosphere
Termite Nest
Soil
Agricultural Soil
Sugarcane Root And Bulk Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Rhizosphere Soil
Switchgrass Rhizosphere
Miscanthus Rhizosphere
4.9%10.8%2.9%4.9%3.9%4.9%4.9%8.8%2.9%6.9%2.9%2.9%7.8%2.9%4.9%3.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11615J12901_1029487413300000953SoilGVKADGVNISASLGGEAGAAKIYWAVVGQRVVVMTYFGPDKQMKQLMPAWDLVRTSLKIVDPKAAPAASPKASP*
soilL1_1002452233300003267Sugarcane Root And Bulk SoilEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLAPGWDLIRTSLKVVDPKAVPAASPKATP*
Ga0062593_10180567423300004114SoilKAFIDPYVAATAKQFVAMGAKPEQTPDTSEIGGMKADGVNISASLGGELGAAKIYWAIVGQRVVVMTFFGPDKQMKQLAPGWDLVRTSLKVMEPKATASPKPSP*
Ga0062590_10124228523300004157SoilEIGGVKADGVNIAASLGGETGAAKIYWALVGQRVVVLTFFGPDKQIKQLTPAWDVIRNSIQVFDPKAAPSATPKPSPE*
Ga0062590_10286871113300004157SoilDARKAFIDPFISATMKQFADMGAKPEQTPDSSEIGGVKADGVNISASLGGEPGAARIYWALINQRVVVLTYFGPDKQLKQLSPAWDLIRTSLKVVDPKAIPSPSPKAAP*
Ga0063356_10261874023300004463Arabidopsis Thaliana RhizosphereMKQFVDMGAKPEQTPDTSEIGGVKADGTIITASLGGEPGAARIYWALIGQRVVVLTYFGPDKQLKQLSPAWDLIRTSLKVVDPKATPSPAAKASPSP*
Ga0062592_10146260013300004480SoilVPDSSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP*
Ga0062594_10144551913300005093SoilMGAKPEQSPDTSEIGGVKADGVKIIASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQLAPAWDLVRTSLKVVDPKALPAASPKSSP*
Ga0065705_1108039123300005294Switchgrass RhizosphereSEIGGVKADGVNISASLGGEAGAAKIYWALVGQRVVVLTYFGPDKQMKQLMPAFDLIRTSLKVVDPKAATSPKPSP*
Ga0065707_1016925633300005295Switchgrass RhizosphereFIDPYIAATAKQFVAMGAKPEQVPDSSEIGGVKADGTSINASLAGEAGAAKIYWALVGQRVVVLTLFGPDKQVKQLAPAWDLIRTSLKVVDPKAVPAASPKNPL*
Ga0065707_1100826123300005295Switchgrass RhizosphereVVATAKQFVQMGAKPEQSPDTSEIGSVKADGVNISASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPAWDTIRNSIQVFDPKAAPKPSPE*
Ga0070676_1042216933300005328Miscanthus RhizosphereEKLPDAKKAFIDPYIAATAKQFVDMGAKPEQVPDSSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP*
Ga0068869_10026461233300005334Miscanthus RhizosphereTAKQFVAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWAVVGQRVVVLTLFGPDKQIKQLTPAWDLVRTSLKVVDPKASPAATAKPSP*
Ga0068869_10071602023300005334Miscanthus RhizospherePDSSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP*
Ga0070680_10192907823300005336Corn RhizosphereFIDPYIAATMKQFVAMGAKPEQSADSSEIAGLKAEGVKISASLGEPGAAKIYWALVGQRVVILTIFGPDREIKQFATAWDLVRSSFKVEDKAAPKPSPKP*
Ga0070682_10001882913300005337Corn RhizosphereGAKTEQVPDSTEIAGLKADGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKELKQRAAVWDLVRTSLKIVDPKAVPTASPKP*
Ga0070675_10054362233300005354Miscanthus RhizosphereKTEQVPDSTEIAGLKAEGTSVNASFGGGDTGAAKIYWALVGQRFVVLSLFGPDKEIKQRAAVWDLVRTSLKVVDPKAAVPAASPKASP*
Ga0070673_10107984413300005364Switchgrass RhizosphereMKADGTSINASLDGETGAAKIYWAVVGQRVVVLTLFGPDKQIKQLTPAWDLVRTSLKVVDPKAAPAATPKP*
Ga0070703_1022400723300005406Corn, Switchgrass And Miscanthus RhizospherePEKMADAKKALVDPLVAGNAKQFQAMRAQTEQVHDSTEIAGLKADGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKERKQRAAVWDLVRTSLKIVDPKAVPAASPKP*
Ga0070672_10134991423300005543Miscanthus RhizospherePDSTEIAGLKADGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKELKQRAAVWDLVRTSLKIVDPKAVPAASPKP*
Ga0070704_10054723833300005549Corn, Switchgrass And Miscanthus RhizosphereFVQMGAKPEKAPDTSEIGGVKADGVSINASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQDAPVWDLVRTSLKISDPKAAPSPKP*
Ga0070704_10090719023300005549Corn, Switchgrass And Miscanthus RhizosphereQFVQMGAKPEQSADTSEIGSVKAEGVNIAASLGGETGAAKIYWALVGQRVVVLTFFGPDKQIKQLTPAWDTIRNSIQVFDPKAAPKPSPE*
Ga0070704_10228706923300005549Corn, Switchgrass And Miscanthus RhizosphereMGAKPEQSADSSEIAGLKADGVKVTANLGAPGAAKIYWALVGQHVVILTIFGPDDEIKQFTPAWDTVRSSLKVEDKAAPKPSPKP*
Ga0068857_10056095113300005577Corn RhizosphereIDPYIAATAKQFVAMGAKPEQVPDSSEIGGVKADGTSINASLGGEAGAAKIYWALVGQRVVVLTFFGPDKQMKQLAPGWDLIRTSLKVVDPKAVPAASPKPTP*
Ga0068857_10057925233300005577Corn RhizosphereATAKQFVAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTLFGPDKQIKQLTPAWDLIRTSLKVVDPKAVPAASPKASP*
Ga0068854_10020498213300005578Corn RhizosphereKPEPVADSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTPAWDLVRTSLKVVDPGAVPAASPKATP*
Ga0070702_10022685313300005615Corn, Switchgrass And Miscanthus RhizosphereAFIDPYIAATAKQFVAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWAVVGQRVVVLTLFGPDKQLKQLTPAWDLVRTSLKVVDPKAAPAATAKPSP*
Ga0068859_10144136713300005617Switchgrass RhizosphereETSEIGGVKADGTSINASLGGETGAAKIYWAVVGQRVVVLTLFGPDKQIKQLTPAWDLVRTSLKVVDPKAAPAATPKP*
Ga0068859_10170587213300005617Switchgrass RhizosphereGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTSAWDLVRTSLKVVDPGAAPAPSPKATP*
Ga0068859_10279669423300005617Switchgrass RhizosphereKADGVKISASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQLAPAWDLVRTSLKVVDPKALPAASPKSSP*
Ga0068864_10078456813300005618Switchgrass RhizospherePETSEIGGMKADGTSINASLDGETGAAKIYWAVVGQRVVVLTLFGPDKQIKQLTPAWDLVRTSLKVVDPKAAPAATPKP*
Ga0068864_10250718523300005618Switchgrass RhizosphereDPYIAATAKQFVAMGAKPEQVPDSSEIGGVKADGTSINASLGGEAGAAKIYWALVGQRVVVLTFFGPDKQMKQLAPGWDLIRTSLKVVDPKAVPAASPKPTP*
Ga0068870_1020754243300005840Miscanthus RhizospherePDAKKAFIDPYVAATAKQFVAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTLFGPDKQIKQLTPAWDLIRTSLKVVDPKAVPAASPKASP*
Ga0068862_10114378813300005844Switchgrass RhizospherePYIAATAKQFVDMGAKPEQVPDSSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP*
Ga0068862_10148224223300005844Switchgrass RhizosphereKAFIDPFISATMKQFADMGAKPEQTPDSSEIGGVKADGVNISASLGGEPGAARIYWALINQRVVVLTYFGPDKQLKQLSPAWDLIRTSLKVVDPKATPSPSPKAAP*
Ga0082029_117066813300006169Termite NestATAKQFVQMGAKPEQSPDTTEIGGIKADGVNITASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQLAPAWDLVRTSLKITDPKATPKPSPSP*
Ga0079221_1125920833300006804Agricultural SoilEQSPDSSEIGGVKADGVKVSASLGGETGAAKIYWALVGQRVVVLTLFGPDKELQKQAAAWDLVRTSLKVIDPKAAASPKP*
Ga0075428_10197351813300006844Populus RhizosphereKQFVSMGAKPEQTPDTSEIGGVKADGVNISASLGGEAGAAKIYWALVGQRVVVMTYFGPDKQMKQLSPAWDLIRTSLKVVDPKAAASPKPSP*
Ga0075425_10015768623300006854Populus RhizosphereGAKPEQSPDTSEIGSVKADGVNISASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPAWDTIRNSIQVFDPKAAPKPSPE*
Ga0075434_10101015213300006871Populus RhizosphereTEIGGVKAEGVNISASLGGETGAAKIYWVLMRQRVVVLTLFGPDKQIKQLSPAWDLVRTSLKIVDPKAAASPTP*
Ga0075424_10277317223300006904Populus RhizosphereAMGAKTEQVPDSTEIAGLKADGTSVNASFGGETGAAKIYWALVGQRFVVLTLFGPDKELKQRAPVWDLVRTSLKIVDPKAVPAASPKASP*
Ga0079219_1085749413300006954Agricultural SoilKPEQSPDSSEIGGAKADGVKITASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQIQKFAPAWDQVRTSLKVVDPKAASPKASP*
Ga0079218_1080754223300007004Agricultural SoilMKQFVAMGAKPEQSADSSEIGGVKAEGVKIAANLGEPGAAKIYWATVGQRVVILTIFGPDREMKQFTPVWDTVRSTLKVED
Ga0079218_1231272913300007004Agricultural SoilIDPYIAARTKQLQDMGAKTEQKPDSSEIGGVKADGVAISASMGGETGAAKIYWAIIGERVVVLTYFAPDNQAKQLTPAWDLIRTSLKVVDPKATPSPSPKASP*
Ga0105251_1021584613300009011Switchgrass RhizosphereQVPEISEVGGVKADGTSINASLGGETGAAKIYWAIVGQRVVVLTLFGPDKQLKQLTPAWDLVRTSLKVVDPKAAPAATAKPSP*
Ga0111539_1117181613300009094Populus RhizosphereQFVQMGAKPEQSPDTSEIGSVKADGVNISASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPAWDTIRNSIQVFDPKAAPKPSPE*
Ga0075418_1081410923300009100Populus RhizosphereEAKQKFIDPYIAATAKQFVQMGAKPEQVPDTSEIGGVKADGVSINASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQHAPVWDLVRTSLKISDPKAAPSPKP*
Ga0111538_1061685613300009156Populus RhizosphereMGAKPEQSPDTSEIGSVKADGVNISASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPAWDTIRNSIQVFDPKAAPKPSPE*
Ga0105241_1144120323300009174Corn RhizosphereDPYVAATAKQFVQMGAKPEQSPDTSEIGSVKADGVNISASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPAWDTIRNSIQVFDPKAAPKPSPE*
Ga0105241_1213345123300009174Corn RhizosphereAKQFVDMGAKPEQVADSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTSAWDLVRTSLKVVDPGAAPAPSPKATP*
Ga0105241_1222445923300009174Corn RhizosphereIDPYIAATSKQFIAMGAKPEQVADSSEIGGAKADGTIISASLGGEAGAAKIYWALVGQRVVVLTIFGPDKQMKQLTAVWDLVRTSLKVVDPKAVPAASPKAVP*
Ga0105248_1106521513300009177Switchgrass RhizosphereKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWAVVGQRVVVLTLFGPDKQIKQLTPAWDLVRTSLKVVDPKAAPAATPKP*
Ga0105248_1257072113300009177Switchgrass RhizosphereTEKQFVAMGANPAQAPDTCEIGGVKADGVKITASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQFAPAWDLVRTSLKVVDPKAVPAASP*
Ga0105237_1164847413300009545Corn RhizosphereVPDSTEIAGLKADGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKELKQRAAVWDLIRTSLKIVDPKAVPAASPKP*
Ga0105238_1234936123300009551Corn RhizosphereAPEKLPDAKKAFIDPYVAATAKQFVAMGAKPEQTPDTSEIGGMKADGVNISASLGGEAGAAKIYWAIVGQRVVVMTFFGPDKQMKQLAPGWDLVRTSLKVTDAKATASPKASP*
Ga0126305_1007519933300010036Serpentine SoilGDKLADAKKAFIDPYIASTEKQFVAMGAKPEKTPDTSEIGSVKAEGVNIGASLAGEKGAAKIYWALVGQRVVVLTIFGPDKEMTKLAPAWDLIRNSLQVFDPKAAPEAAPKPTP*
Ga0126305_1022503113300010036Serpentine SoilKAFIDPYVAATVKQFVAMGAKPEQVADSSEIGGTKADGTSINASLGGEAGAAKIYWAIVGQRVVVLTLFGPDKQMKQLTPAWDLVRTSLKVVDPKAVPAASPKASP*
Ga0126304_1022660113300010037Serpentine SoilQSPDTSEIGGVKADGVIVSASLGGEAGAAKIYWAVVGQRVAVLTLFGPDKQTKQHTPAWDLVRTSLKINATPAATPKPSP*
Ga0126304_1088383613300010037Serpentine SoilASTEKQFVAMGAKPEKTPDTSEIGSVKAEGVNIGASLAGEKGAAKIYWALVGQRVVVLTIFGPDKEMTKLAPAWDLIRNSLQVVDPKAAPEAAPKPTP*
Ga0126309_1057889323300010039Serpentine SoilVSINASLGGEPGAAKIYWALVGQRVAVLTVFGPDKQTKQLAAAWDLVRTSLKVQDPKATPTASPKPSP*
Ga0126308_1057997613300010040Serpentine SoilKPEQSPDVSEIGGVKADGVSINASLGGESGAAKIYWALVGQRVAVLTLFGPDKQTKQLAAAWDLVRTSLKIQDSKATPAASPKP*
Ga0126308_1128318813300010040Serpentine SoilIGGVKAEGVKISASLGEPGAAKIYWALVGQRVVLLTLFGPDRETKQLASAWDLVRTSLKVNDPKAAPAASPKP*
Ga0126312_1047446113300010041Serpentine SoilKPEQTPDSSEIGGVKADGTNISASLAGEAGAAKIYWALVGQRVVVLTFFGPDAQTKKLSPVFDLVRTSLKVLDPKAMPSASPKASP*
Ga0126310_1071654023300010044Serpentine SoilAATAKQFVAMGAKPEQSPDVSEIGGVKADGVSINASLGGEPGAAKIYWALVGQRVAVLTIFGPDKQTKQLAADWDLVRTSLKVQDPKATPTASPKPSP*
Ga0126311_1051525513300010045Serpentine SoilQFVAMGAKPEQSPDVSEIGGVKADGVSINASLGGEPGAAKIYWALVGQRVAVLTIFGPDKQTKQLAAAWDLVRTSLKVQDPKATPAASPKPSP*
Ga0126311_1192806313300010045Serpentine SoilGVKAEGVKISASLGEPGAAKIYWALVGQRVVLLTLFGPDRETKQLASAWDLVRTSLKVNDPKAAPAASPKP*
Ga0134128_1024025313300010373Terrestrial SoilVAMGAKPEQVADTSEIGGVKADGTSINASLGGETGAAKIYWAVVGQRVVVLTLFGPDKQLKQLAPAWDLVRTSLKVVDPNASPAASPKTSPE*
Ga0134128_1159447923300010373Terrestrial SoilQFVAMGAKPEQTPDATEIGGAKAEGVNISASLGGETGAAKIYWALLGQRVVVLTLFGPDKQIKQLSPAWDLVRTSLKVVDPKAVPAATAKPSP*
Ga0134124_1072640533300010397Terrestrial SoilDSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLASAWELVRTSLKVVDPGAAPAPSPKATP*
Ga0134124_1081115413300010397Terrestrial SoilAFIDPYIAATAKQFVAMGAKPEQVPETSEVGGVKADGTSINASLGGETGAAKIYWAIVGQRVVVLTLFGPDKQLKQLTPAWDLVRTSLKVVDPKAAPAATAKPSP*
Ga0134122_1078639113300010400Terrestrial SoilAKKAFIDPYIAATAKQFVDMGAKPEQKPDTSEIGGVKADGVAISASLGGEAGAARIYWAIVGQRVVVMTIFGPDNQTKKLFPAWDLIRTTLKIVDPKATPSPSPKTSPSP*
Ga0105246_1058844013300011119Miscanthus RhizosphereKPEQVADSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTPIWDLVRTSLKVVDPGAVPAATPKATP*
Ga0150985_10734812013300012212Avena Fatua RhizospherePTQAPDTTEIGGAKADGVVISASLGGEAGAAKIYWALVGNRVVVLTFFGPNKELKQFLTAWDLIRTSLKIEDPKRLRNHHQSLS*
Ga0164304_1161029213300012986SoilTAKQFVAMGAKPEQANDSTEIAGEKAEGVAITASLGGEPGAAKIYWALIGRRVVVLTYFGPDKELKQFASAWDMIRNSLKVEDPKAAPQASPMP*
Ga0157371_1048399913300013102Corn RhizosphereLPDAKKAFIDPYIASTEKQFVAMGAKPEQSPDTSEIGGVKADGVKISASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLQQLAPAWDLVRNRLKVVDPKAVPAASPKPSP*
Ga0157371_1066299023300013102Corn RhizosphereAFIDPYIAATTKQFVDMGAKPEQVADSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTPAWDLVRTSLKVVDPSAVPKATP*
Ga0157378_1222600123300013297Miscanthus RhizosphereMGAKPEQKPDTSEIGGVKADGVAISASLGGEAGAARIYWAIVGQRVVVMTIFGPDNQTKKLSPAWDLIRTSLKVVDPKATPSPSPKSSPE*
Ga0163162_1223294423300013306Switchgrass RhizosphereVAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWAVVGQRVVVLTLFGPDKQIKQLTPAWDLVRTSLKVVDPKAAPAASPKASP*
Ga0157372_1098532013300013307Corn RhizosphereMGAKPEQSPDTTEIGGVKADGVKISASLGGEPGAAKIYWALVGQRVAVLTLFGPDKQMKQLAPAWDLVRTSLKIVETKP*
Ga0157375_1235537623300013308Miscanthus RhizosphereTEQVPDSTEIAGLKAEGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKELKQRAAVWDLVRTSLKIVDPKAVPAASPKP*
Ga0157375_1259670323300013308Miscanthus RhizosphereVKADGVNISASLGGEPGAAKIYWALVGQRVVVMTFFGPDKQMKQLAPGWDLVRTSLKVTDAKATASPKASP*
Ga0163163_1086875313300014325Switchgrass RhizosphereVDPLIAGNAKQFVAMGAKTEQVPDNTEIAGLKAEGTSVNASFGSDTGATKIYWTLVGQRFVVLTLFGPDKELKQRAPVWDLVRTSLKVVDPKAAPAATPKP*
Ga0157377_1112670423300014745Miscanthus RhizosphereGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP*
Ga0157376_1218116523300014969Miscanthus RhizosphereMSAEKMADAKKAVVDPLVAGNAKLFASMGAKTEQVPDSTEIAGIKADGTSVNASFGSDTGAAKIYWVLVGQRFVVLTLLGPDKELKQRAPVWDLVRTSLKVVDPKAVPAATAKPSP*
Ga0137409_1125742523300015245Vadose Zone SoilEIGGVKADGVKIRAVLGDEPGAAQIFWVLAGKRVVVLTFFGPDKDLKQWTSAWDLVRGSLKIEEINPVPKPTPK*
Ga0132257_10191101223300015373Arabidopsis RhizosphereGGAKAEGVNISASLGGETGAAKIYWALVGQRVVVLTLFGPDKQIKQLAPAWDVVRNSIQVFDPKAAPKPSPE*
Ga0132255_10501512313300015374Arabidopsis RhizosphereKALVDPLIAGNAKQFVAMGAKTEQVPDSTEIAGLKADGTSVNAAFSGETGAAKIYWTLVGQRFVVLTLFGPDKEIKQRAAVWDLVRTSLKIVDPKAVPAASPKP*
Ga0247669_104768413300024182SoilKFADAKKSFIDPYIAATMKQFVAMGAKPEQSADSSEIAGMKADGVKISASLGEPGAAKIYWALMGQRVVILTVFGPDREIKQFAPAWDIVRSSLKIEDKAAPKPSPKP
Ga0207654_1117576913300025911Corn RhizosphereAATAKQFVDMGAKPEQVPDSSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP
Ga0207695_1158244923300025913Corn RhizosphereKPEQVADSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTPAWDLVRTSLKVVDPSAVPKATP
Ga0207671_1148257123300025914Corn RhizosphereVPDSTEIAGLKADGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKELKQRAAVWDLIRTSLKIVDPKAVPAASPKP
Ga0207681_1103536723300025923Switchgrass RhizosphereKQFVAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQLTPAWDLVRTSLKITDPKATPAASPKTSP
Ga0207709_1074512613300025935Miscanthus RhizosphereAKADGTIISASLGGEAGAAKIYWALVGQRVVVLTIFGPDKQMKQLTPVWDLVRTSLKVVDPKAIPAASPKAVP
Ga0207691_1099164723300025940Miscanthus RhizospherePDSTEIAGLKADGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKELKQRAAVWDLVRTSLKIVDPKAVPAASPKP
Ga0207676_1019721243300026095Switchgrass RhizosphereGAKKAFIDPYIAATAKQFVDMGAKPEQVADSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTPIWDLVRTSLKVVDPGAVPAASPKATP
Ga0207674_1046910113300026116Corn RhizosphereAMGAKPEQVPDSSEIGGVKADGTSINASLGGEAGAAKIYWALVGQRVVVLTFFGPDKQMKQLAPGWDLIRTSLKVVDPKAVPAASPKPTP
Ga0207674_1221222023300026116Corn RhizosphereATAKQFVAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTLFGPDKQIKQLTPAWDLIRTSLKVVDPKAVPAASPKASP
Ga0268265_1184521313300028380Switchgrass RhizosphereKKAFIDPYIAATAKQFVDMGAKPEQVPDSSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP
Ga0307416_10201981323300032002RhizosphereQSPDTTEIGGIKADGVNITASLGGETGAAKIYWALVGQQVVVLTLFGPDKQLKQLAPAWDLVRTSLKITDPKATPAASPKTSP
Ga0307414_1175911313300032004RhizosphereMGAKPQQSPDVSEIGGVKADGVSIHASLGGDPGAAKIYWALVGQRVAVLTIFGPDKETKQLAPAWDLIRTSLKVTDPKAIPAASPKASP
Ga0307411_1073142323300032005RhizosphereFIDPYIAARTKQLQDVGAKTEQKPDSSEIGGVKADGVAISASMGNETGTAKIYWAIIGERVVVLTYFAPDNQIKQLTPAWDLIRTSLKVVNLKATPSPSPKPTPE
Ga0373959_0100881_2_2503300034820Rhizosphere SoilPEQSPDTSEIGSVKADGVTISASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPAWDTIRNSIQVFDPKAAPKPSPE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.