NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F101822

Metagenome Family F101822

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F101822
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 91 residues
Representative Sequence MDGAARGRLGPKLGSVVLASLLLCEVAAAMLGAEAVFFSTLVAAWLVLPAIVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA
Number of Associated Samples 51
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 77.32 %
% of genes near scaffold ends (potentially truncated) 29.41 %
% of genes from short scaffolds (< 2000 bps) 83.33 %
Associated GOLD sequencing projects 49
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.098 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(47.059 % of family members)
Environment Ontology (ENVO) Unclassified
(47.059 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(62.745 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130
1Ga0058689_100451112
2Ga0058697_100390233
3Ga0058697_100449903
4Ga0058697_106037922
5Ga0058697_106620801
6Ga0081538_100228752
7Ga0082029_16665102
8Ga0079215_108612142
9Ga0079216_107634141
10Ga0105679_100714722
11Ga0105679_102613193
12Ga0105679_107709421
13Ga0126307_100034987
14Ga0126307_100951613
15Ga0126307_101563582
16Ga0126307_101971672
17Ga0126307_103776862
18Ga0126307_105784481
19Ga0126307_106452351
20Ga0126307_110998471
21Ga0126307_112959351
22Ga0126313_100490745
23Ga0126313_102367172
24Ga0126313_109667453
25Ga0126313_114349532
26Ga0126305_100229484
27Ga0126305_100705002
28Ga0126304_100789431
29Ga0126304_101560582
30Ga0126304_103807643
31Ga0126315_102160162
32Ga0126315_105167851
33Ga0126315_105335141
34Ga0126315_108412562
35Ga0126315_111569042
36Ga0126309_100439212
37Ga0126309_100712882
38Ga0126309_101719021
39Ga0126309_102904372
40Ga0126308_103118552
41Ga0126308_105083231
42Ga0126308_106437851
43Ga0126308_108194451
44Ga0126308_108672372
45Ga0126308_110037551
46Ga0126312_102016442
47Ga0126312_102792162
48Ga0126312_103722832
49Ga0126314_101519284
50Ga0126314_101744242
51Ga0126314_102682232
52Ga0126314_114634071
53Ga0126310_102453821
54Ga0126310_103637272
55Ga0126310_104021052
56Ga0126310_112245161
57Ga0126311_105921002
58Ga0126311_111167811
59Ga0126306_106361481
60Ga0126306_109267041
61Ga0136631_101320811
62Ga0136623_100558544
63Ga0136625_10642383
64Ga0136632_100127561
65Ga0136632_104877001
66Ga0136610_11192792
67Ga0136619_101981123
68Ga0136615_102111772
69Ga0136614_107813911
70Ga0182000_100565472
71Ga0182000_105487261
72Ga0183260_101713582
73Ga0136617_100270156
74Ga0190275_113615841
75Ga0190269_103879661
76Ga0190269_104705281
77Ga0190268_102835192
78Ga0190268_109528991
79Ga0190274_125773172
80Ga0190273_119332321
81Ga0190273_120581712
82Ga0190264_101277412
83Ga0190267_100448063
84Ga0190267_109620591
85Ga0196962_100032117
86Ga0209461_100803272
87Ga0307318_103791421
88Ga0268240_101573181
89Ga0307408_1000927221
90Ga0307413_113612652
91Ga0307410_105071301
92Ga0307407_101336543
93Ga0307407_102833232
94Ga0307409_1001925512
95Ga0307409_1015932632
96Ga0307416_1026515861
97Ga0307414_115374823
98Ga0307411_101024434
99Ga0268251_100318143
100Ga0268251_100463813
101Ga0268251_102725422
102Ga0334911_051671_1_243
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 59.13%    β-sheet: 0.00%    Coil/Unstructured: 40.87%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080MDGAARGRLGPKLGSVVLASLLLCEVAAAMLGAEAVFFSTLVAAWLVLPAIVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLAExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
95.1%4.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Polar Desert Sand
Soil
Soil
Serpentine Soil
Termite Nest
Agricultural Soil
Sub-Biocrust Soil
Soil
Tabebuia Heterophylla Rhizosphere
Rhizosphere
Agave
Agave
10.8%11.8%2.9%47.1%3.9%9.8%6.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0058689_1004511123300004016AgaveLTAHLWRSAAKGRVHGKGGGARGRLGPTLGSLVLASLLLCEVAAAMVGAEAAFFSTIVAAWLILSVVVGLRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0058697_1003902333300005562AgaveLTGFLYRSGAKGLVHGKGPAARGRLGPKLGSVVLASLLLCEVAAAMVGAEAVFFSTLVAAWLVLPAVVGPKNVLDAGCFYMLVSLGIVVVVHVARYGLISLLA*
Ga0058697_1004499033300005562AgaveMDGAARGRVGPKLGSVVLASLLLCEVAAAILGAEAVFFSTIVAAWLVLPAVVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0058697_1060379223300005562AgaveMDGATRGRLGPKLGSVVLASLLLCEVAAAILGAEAVFFSTIVAAWLVLPAVVGPRNVLDAGCFYMLVSLSIVVVVDVARYGPISLLA*
Ga0058697_1066208013300005562AgaveLGPKLGSVVLASLLLCEVAAAMLGAEAVFFSTLVAAWLVLPAIVGPRNVLDAGCFYMLVSLGIVVVVDVARYGPISFLA*
Ga0081538_1002287523300005981Tabebuia Heterophylla RhizosphereLASLLFCEVVAAMVGAEAVFFSTLVAAWLVLPAVVRPRDVLDAGCFYMLISLGIVVIVSVASHGADFLLA*
Ga0082029_166651023300006169Termite NestLTGFLYRSGANVRIHGNGSAARGRLGPTLGSVVLASLLLCEVAAAMVGAEAVFFTTIVAAWLVLPAVVGPKNVLDAGCFYMLVSLGIVVVVDVARYGPISLLA*
Ga0079215_1086121423300006894Agricultural SoilLTGLLFRAAAKGRAHGKDDAARGRLGPTLGSVVLASLLFCEVASAMVGDETVFFTTIVGTWLVLPAVVGLRNVLDAGCFYMLISLGIVVIVSAAS*
Ga0079216_1076341413300006918Agricultural SoilHRGRARGDLTGLLYRSGANGRVHGKGSAARRRLGPTLGSVVLASLLLCEVAAAMVGAEAAFFSTIVVAWLILPVVVGLRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0105679_1007147223300007790SoilMYRAAAKGEAHGMDGAARGRLGPKLGSVVLASLLLCEVAAAMLGAEVVFFSTLVAAWLVLRAIVGPRNVLDAGCFYMLISLGIVVDVARYRPISLLA*
Ga0105679_1026131933300007790SoilLTGLRSNEGARGRPALSSAVLALLLLCEVASSMVGAEVVFFSALVIAWLVLPAVVGLRNVLDAGCLFMLVSLGVVVVVDLARHGPAALLT*
Ga0105679_1077094213300007790SoilVLASLLFCEVASAMVGAETVFFSTIVGSWLVLPAIVGLRNVLDAGCFYMLISLGIVVVVSAAS*
Ga0126307_1000349873300009789Serpentine SoilLASLLFCEVASAMVGAEMVFFSTIVGSWLVLPAVVGLRNVLDAGCFYMLISLGVVVIVSAAS*
Ga0126307_1009516133300009789Serpentine SoilLCRAAAKSQAHGNDGAARGWLGPTLGSVVLASLLICEVAAAMVGAQAVFFSSLVAAWIVLPAVVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0126307_1015635823300009789Serpentine SoilLTGLLFRAAEKGRVHGKDGAARGRLGTTLGSLVLASLLLCEVAAAMIGAEAVFFSTLVAAWLVLPVIVGLRNVLDAGCFYMLISLGIVVVVDAARYGPISLLA*
Ga0126307_1019716723300009789Serpentine SoilMNGAARGRLGPKLGSVVLASLLLCEVAAAMLGAEAVFFSTLVAAWLVLPAIVGPRNVLDAGCFYMLISLGIVVVVDVAWYGPISLLA*
Ga0126307_1037768623300009789Serpentine SoilLFRATAQGRAHFSGGAVRGWLGSVVLASLLLSEVASAMVGTEAVFFSTIVAAWLVLPAVVGPKNVLDAGCFYMLISLGIVVVVSAAS*
Ga0126307_1057844813300009789Serpentine SoilMGRIHGKDGAAHGRLGTTLGSLVLASLLLCEVAAAMVGAEAAFFSTIVAAWLVLPLVVGLRNVLDAGCLYMLISLGIVVVVDVARYGPISLLA*
Ga0126307_1064523513300009789Serpentine SoilVACGRLEPTLESVVLASLLLCEVAAVMVGAEAVFFSTLVAAWMVLPAVVGPRNVLDAGCFYMLVSLGIVVVVYVARYGPISLLA*
Ga0126307_1109984713300009789Serpentine SoilVACGRLGPTLESVVLASLLLCEVAAAMVGAEAVFFSTLVAAWMVLPAVVESRNVLDAGCFYMLVSLGIVVVVYVAWYGPISLLA*
Ga0126307_1129593513300009789Serpentine SoilVARGRFGPTLESVVLASLLLCEAAAAMVGAEAVFFSTIVAAWLVLPAVVESRNVLDAGCFYMFISLGIVVVVDVARYGPISLLA*
Ga0126313_1004907453300009840Serpentine SoilMGRIHGKDGAAHGRLGTTLGSLVLASLLLCEVAAAMVGAEAAFFSTIVAAWLVLPVVVGLRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0126313_1023671723300009840Serpentine SoilMDGAARGRLGPKLGSVVLASLLLCEVAAAMLGAEAVFFSTLVAAWLVLPAIVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0126313_1096674533300009840Serpentine SoilVARGRFGPTLESVVLASLLLCEAAAAMVGAEAVFFSTIVAAWLVLPALVESRNVLDAGCFYMLISLGIVVVVDVPRYGPISLLA*
Ga0126313_1143495323300009840Serpentine SoilLTGLWFKARSKGHTVRGRVGSNLGSTVLALLLISEVASSIAGAGTVFSASVVVAWLVLLAVVGIENVLDAGCFYMLVSLGIVVVVD
Ga0126305_1002294843300010036Serpentine SoilLCRAAAKSQAHGNDGAARGWLGPTLGSVVLASLLICEVAAAMVGAQAVFFSSLVAAWIILPAVVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0126305_1007050023300010036Serpentine SoilVLASLLFCEVASAMVGAEMVFFSTIVGSWLVLPAVVGLRNVLDAGCFYMLISLGVVVIVSAAS*
Ga0126304_1007894313300010037Serpentine SoilGRLGTTLGSLVLASLLLCEVAAAMVGAEAAFFSTIVAAWLVLPLVVGLRNVLDAGCLYMLISLGIVVVVDVARYGPISLLA*
Ga0126304_1015605823300010037Serpentine SoilVARGRLGTTLGSLVLASLLLCEVAAAMVGAEAAFFSTIVAAWLVLPVVVGLRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0126304_1038076433300010037Serpentine SoilLTGLLFRATAQGRAHFSGGAVRGWLGSVVLASLLLSEVASAMVGTEAVFFSTIVAAWLVLPAVVGPKNVLDAGCFYMLISLGIVVVVSAAS*
Ga0126315_1021601623300010038Serpentine SoilMDGAARGRLGPKLGSVVLASLLLCEVAAAMLGAEAVFFSTLVAAWLVLPAIVGPRNVLDAGCFYMLISLGIVVVVDVAWYGPISLLA*
Ga0126315_1051678513300010038Serpentine SoilGSVARGRLGPTLGSLVLASLLLCEVAAAMVGAEAAFFSAIVAAWLVLPVVVGLRSVLDAGCFHMLISLGIVVVVDVARYGPISLLA*
Ga0126315_1053351413300010038Serpentine SoilVARGRFGPTLESVVLASLLLCEAAAAMVGAEAVFFSTIVAAWLVLPAVVESRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0126315_1084125623300010038Serpentine SoilMDGAARGRFGPKLGSVVLASLLLCEVAAAMLGAEAVFFSTLVAAWLVLPAVVGPRKVLDAGCFYMLISLGIVVVVYVARYDLISLLA*
Ga0126315_1115690423300010038Serpentine SoilLALLLFTEVASSIVGAEAVFFSALVVAWLVLPVVVGLRSVLDAGCLFMLLSLGIVVVVDVANHGPGSLLT*
Ga0126309_1004392123300010039Serpentine SoilLCRAATKSQAHGNDGAARGWLGPTLGSVVLASLLICEVAAAMVGAQAVFFSSLVAAWIVLPAVVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0126309_1007128823300010039Serpentine SoilMGQAHGKDGAARGRFGPTLGSVVLASLLFCEVASAMVGDETVFFSTIVGTWLVLPAVVGLRNVLDAGCFYTLISLGIVVIVSAAS*
Ga0126309_1017190213300010039Serpentine SoilLCRAAAQGRAHGKYGAVRGRLGPALGSVVLASLLICEVASAMVGAQAVFFSTIVAAWIVLPAVVGPRNILDAGCFYMLISLGIVVVVDVARYGPSSLLA*
Ga0126309_1029043723300010039Serpentine SoilMDGAARGRFGPKLGSVVLASLLLCEVAAAMLGAEAVFFSTLVAAWLVLPAVVGPRKVLDAGCFYMLISLGIVVVVYVARYGLISLLA*
Ga0126308_1031185523300010040Serpentine SoilMDGAARGRLGPKLGSVVLASLLLCEVAAAILGAEAVFFSTIVAAWLVLPAIVGPRNVLDAGCFYMLISLGIVAVVDVARYGPISLLA*
Ga0126308_1050832313300010040Serpentine SoilLCRAAAKSQAHGNDGAARGWLGPTLGSVVLASLLICEVAAAMVGAQAVFFSSLVAAWIVLPAVVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA
Ga0126308_1064378513300010040Serpentine SoilRGRLGSVVLASLLLCEVAAAMVGAEAVFFSTLVAAWLVLPAVVGPRNVLDAGCFYMLVSLGIVVVVDVARYGLISLLA*
Ga0126308_1081944513300010040Serpentine SoilMDGAARGRLGPKLGSVVLASLLLCELAAAMLGAEAVFFSTLVAAWLVLPAIVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0126308_1086723723300010040Serpentine SoilAVLALLLFTEVASSIVGAETVFFSALVVAWLVLPAVVGLRNVLDAGCYFMLISLGIVVVVDVAHHGPGSLLT*
Ga0126308_1100375513300010040Serpentine SoilRGRLGSVVLASLLLCEVAAAMVGAEAVFFSTLVAAWLVLPAVVGLRNVLDAGCFYMLISLGIVVVVSVASHCAGSRLA*
Ga0126312_1020164423300010041Serpentine SoilLTGLLFRAAEKGWVHGKDGAARGRLGTTLGSLVLASLLLCEVAAAMIGAEAVFFSTLVAAWLVLPVIVGLRNVLDAGCFYMLISLGIVVVVDAARYGPISLLA*
Ga0126312_1027921623300010041Serpentine SoilKGSAARGRLGPTLGSVVLASLLLCEVAAAMVGAEAVFFSTLVAAWLVLPAVVGLRNVLDAGCIYMLISLGIVVVVSVASHCAGLRLA*
Ga0126312_1037228323300010041Serpentine SoilLTGFLFRADAKGQAHGIDGAARGRLGPKLGSVVLASLLLCEVAAAILGAEAVFFSTIVAAWLVLPAIVGPRNVLDAGCFYMLISLGIVAVVDVARYGPISPSVTSQQSRPLADPTSM*
Ga0126314_1015192843300010042Serpentine SoilSVARGRLGPTLGSLVLASLLLCEVAAAMVGAEAAFFSTIVAAWLVLPLVVGLRNVLDAGCLYMLISLGIVVVVDVARYGPISLLA*
Ga0126314_1017442423300010042Serpentine SoilVARGRLGPTLGSLVLASLLLCEVAAAMVGAEVAFFSTIVAAWLVLPVVVGLRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0126314_1026822323300010042Serpentine SoilMDGAARGRFGPKLGSVVLASLLLCEVAAAMLGAEAVFFSTLVAAWLVLPAVVGPRKVLDAGCFYMLISLGIVVVVYVARYGPIPLLA*
Ga0126314_1146340713300010042Serpentine SoilLGPKLGSVVLASLLLWEVAAAILGAEAVFFSTIVAAWLVLPAVVGPRNVLDAGCFYMLVSLSIVVVVDVARYGPISPSVTSQQSRPLADPTSM*
Ga0126310_1024538213300010044Serpentine SoilAGAKGQAHGMDGAARGRLGPKLGSVVLASLLLCEVAAAMLGAEAVFFSTLVAAWLVLPAIVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0126310_1036372723300010044Serpentine SoilVARGRFGPTLESAVLASLLLCEAAAAMVGAEAVFFSTIVAAWLVLPAVVESWNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0126310_1040210523300010044Serpentine SoilMDGAARGRLGPKLGSVVLASLLLCEVAAAILGAEAVFFSTIVAAWLVLPAIVGPRNVLDAGCFYMLTSLGIVVVVDVARYGPISLLA*
Ga0126310_1122451613300010044Serpentine SoilMDGAARGRFGPKLGSVVLASLLLCEVAAAMLGAEAVFFSTLVAAWLVLPAVVGPRKVLDAGCFYMLISLGIVVVVYVARYGPLSLLA*
Ga0126311_1059210023300010045Serpentine SoilLTGFLFRADAKGQAHGIDGAARGRLGPKLGSVVLASLLLWEVAAAILGAEAVFFSTIVAAWLVLPAIVGPRNVLDAGCFYMLISLGIVAVVDVARYGPISPSVTSQQSRPLADPTSM*
Ga0126311_1111678113300010045Serpentine SoilLCRAAAKSQAHGNDGAARGWLGPTLGSVVLASLLICEVAAAMVGAQAVFFSSLVAAWIVLPAVVGPRNVLDAGCYYMLISLGIVVVVDVARYGPSSLLA*
Ga0126306_1063614813300010166Serpentine SoilLCRAAAKSQAHGNDGAARGWLGPTLGSVVLASLLICEVAAAMVGAQAVFFSSLVAAWIVRPAVVGPRNVLDAGCFYMLISLGIVVVV
Ga0126306_1092670413300010166Serpentine SoilMARGRFGPTLESVVLASLLLCEAAAAMVGAEAVFFSTIVAAWLVLPAVVESRNVLDAGCFYMLISLGIVVVVDVPRYGPISLLA*
Ga0136631_1013208113300012043Polar Desert SandAGEKGQTFGRLGPILGTVVLTTLLFCEVAAVMVGAEAILFSTLLAAWMILPAVVGLRNVLDAGCFFMLVSLGIVVVVSAASHGAGSLLA*
Ga0136623_1005585443300012045Polar Desert SandLTGLWCKAGEKGQTFGRLGPILGTVVLTSLLFCEVAAAMVGAEAILFSTLLAAWMILPAVVGLRNVLDAGCFFMLVSLGIVVVVSVASHGAGSLLA*
Ga0136625_106423833300012091Polar Desert SandLTGLWCKAGEKGQTFGRLGPILGTVVLTTLLFCEVAAVMVGAEAILFSTLLAAWMILPAVVGLRNVLDAGCFFMLVSLGIVVVVSAASHGAGSLLA*
Ga0136632_1001275613300012093Polar Desert SandLTGLWCKAGEKGQTFGRLGPILGTVVLTSLLFCEVAAAMVGAEAILFSTLLAAWMILPAVVGLRNVLDAGCFFMLVSLGIV
Ga0136632_1048770013300012093Polar Desert SandFRGDLTGLWCKAGEKGQTFGRLGPILGTVVLTTLLFCEVAAVMVGAEAILFSTLLAAWMILPAVVGLRNVLDAGCFFMLVSLGIVVVVSVASHGAGSLLA*
Ga0136610_111927923300012184Polar Desert SandMLGTVVLTSLLFCEVAAAMVGAEAILFSTLLAAWMILPAVVGLRNVLDAGCFFMLVSLGIVVVVSAASHGAGSLLA*
Ga0136619_1019811233300012185Polar Desert SandLTGLWCKAGEKGQTFGRLGPILGTVVLTTLLFCEVAAVMVGAEAILFSTLLAAWMILPAVVGLRNVLDAGCFFMLVSLGIVVVVSVASHGAGSLLA*
Ga0136615_1021117723300012678Polar Desert SandLTGLWCKAGEKGQTFGRLGPILGTVVLTSLLFCEVAAAMVGAEAILFSTLLAAWMILPAVVGLRNVLDAGCFFMLVSLGIVVVVSAASHGAGSLLA*
Ga0136614_1078139113300012684Polar Desert SandLGTVVLTSLLFCEVAAAMVGAEAILFSTLLAAWMILPAVVGLRNVLDAGCFFMLVSLGIVVVVSVASHGAGSLLA*
Ga0182000_1005654723300014487SoilMDGAARGRLGPKLGSVVLASLLLCEVAAAILGAEAVFFSTIVAAWLVLPAIVGQRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA*
Ga0182000_1054872613300014487SoilLWRSAAKDRVHGKGGGARGRLGPTLGSLVLASLLLCEVAAAMVGAEAAFFSTIVAAWLILPVVVGLRNVLDAGCFYMLISLGIVVVVSVASHCAGSRLA*
Ga0183260_1017135823300017787Polar Desert SandLTGLWCKAGEKGQTFGRLGPILGTVVLTSLLFCEVAAAMVGAEAILFSTLLAAWMILPAVVGLRNVLDAGCFFMLVSLGIVVVVSVASHGAGSLLA
Ga0136617_1002701563300017789Polar Desert SandLTGLWCKAGEKGQTFGRLGPILGTVVLTTLLFCEVAAVMVGAEAILFSTLLAAWMILPAVVGLRNVLDAGCFFMLVSLGIVVVVSAASHGAGSLLA
Ga0190275_1136158413300018432SoilLTGLWGKAGEKGRSFGRFGPMLGTAVLISLLFCEVVAAMVGAEAILFSTILAAWLILPAVVGFRNVLDAGCFFMFVSLGIVVVVSVAS
Ga0190269_1038796613300018465SoilLTSLLCRAAAKSQAHGNDGAARGWLGSVVLASLLICEVAAAMVGAQAVFFSSLVAAWIVLPAVVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA
Ga0190269_1047052813300018465SoilLTGLLCRSAAKGRVHGKGSGARGRLGSVVLASLLLCEVAAAMVGAEAAFFSTIVAAWLILSVVVGLRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA
Ga0190268_1028351923300018466SoilDLTGLLYRSGANGRVHGKGSAARGRLGPTLGSVVLASLLLCEVAAAMVGAETAFFSTIVAAWLILPVVVGLRNVLDAGCFYMLISLGIVVVVSVASHYAGLRLA
Ga0190268_1095289913300018466SoilLIGLLFRADEAHVKDGAARGRLEPTLGSVVLASLLFCEVASAMVGAEAVFFSTIVVAWLFLPLVVGLRNVLDAGCYYMLISLGIVVVAGV
Ga0190274_1257731723300018476SoilLTSLLCRAAAQGRAHGKYGAVRGRLGPALGSVVLASLLICEVASAMVGAQAVFFSTIVAAWIVLPAVVEPRNVF
Ga0190273_1193323213300018920SoilLNGFWCKADEKGRPFGRLGPTLGTVVLTSLLFCEVAAAMVGAEAILFSTLLAAWLILPAVVGLRNVLDAGCFFMLVSLGIVVVVSVATHGAGSL
Ga0190273_1205817123300018920SoilLTSLLCRAAAKNQAHGNDGAARGWLGPTLGSVVLASLLICEVASAMVGAQAVFFSTIVAAWLVLRVIVGPRNVLDAGCFYMLISLGIVMVVGVAS
Ga0190264_1012774123300019377SoilLTGLLCRAAAKGLVHGKGSAARGRLGPTLGSVVLASLLLCEVAAAMVGAQAVFFSTIVAAWIVLPAVVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA
Ga0190267_1004480633300019767SoilLTALLWRSAAKGRVHGKGSGARGRLGPTLGSLVLASLLLCEVAAAMVGAEAAFFSTIVAAWLILTVVVGLRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA
Ga0190267_1096205913300019767SoilRRARGDLTGLLCRAAAKGRARSMDGASRGRLEPTLGSVVLASLLICEVAAAMVGAQAVFFSSLVAAWIVLPAVVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA
Ga0196962_1000321173300024430SoilMPDLTLSKMGERGFDGPLFKAAAKGRAHVDGGAVRGWLESVVLASLLFCEVASAVVGAEAVFFSTIVAAWLVLPAVVGLKNVLDAGCFYMLISLGIVVVISVAS
Ga0209461_1008032723300027750AgaveLTAHLWRSAAKGRVHGKGGGARGRLGPTLGSLVLASLLLCEVAAAMVGAEAAFFSTIVAAWLILSVVVGLRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA
Ga0307318_1037914213300028744SoilVVLASLLICEVAAAMVGAQAVFFSSLVAAWIILPAVVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA
Ga0268240_1015731813300030496SoilLTGFLFRADAKVQAHCMDGAARGRVGPKLGSVVLASLLLCEVAAAILGAEAVFFSTIVAAWLVLPAVVGPRNVPDAGCFYMLISLGIVVVVDVARYGPISLLA
Ga0307408_10009272213300031548RhizosphereLTDLLCSAAAKSRVRGKGSVARGRFGPTLESVVLASLLLCEAAAAMVGAEAVFFSTIVAAWLVLPAVVESRNVLDAGCFYMLISLGIVVVVDVPRYGPISP
Ga0307413_1136126523300031824RhizosphereVLALLLFTEVASSIVGAETVFFSALVVAWLVLPAVVGLRNVLDAGCYFMLISLGIVVVVDVAHHGPGSLLT
Ga0307410_1050713013300031852RhizosphereKGSVARGRFGPTLESVVLASLLLCEAAAAMVGAEAVFFSTIVAAWLVLPALVESRNVLDAGCFYMLISLGIVVVVDVPRYGPISLLA
Ga0307407_1013365433300031903RhizosphereLTDLLCSAAAKSRVRGKGSVARGRFGPTLESVVLASLLLCEAAAAMVGAEAVFFSTIVAAWLVLPALVESRNVLDAGCFYMLISLGIVVVVDVPRYGPISLLA
Ga0307407_1028332323300031903RhizosphereLTGLLYRSGANGRVHGKGSAARGRLGPTLGSVVLASLLLCEVAAAMVGAEAVFFSTLVAAWLVLPAVVGLRNVLDAGCFYMLISLGIVVVVSVASHCAGSRLA
Ga0307409_10019255123300031995RhizosphereSAAAKSRVRGKGSVARGRFGPTLESVVLASLLLCEAAAAMVGAEAVFFSTIVAAWLVLPAVVESRNVLDAGCFYMLISLGIVVVVDVPRYGPISLLA
Ga0307409_10159326323300031995RhizosphereLTDLLCRAAAKRRVHAKGSVARGRLGPTLGSLVLASLLLCEVAAAMVGAEVAFFSTIVAAWLVLPVVVGLRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA
Ga0307416_10265158613300032002RhizosphereLTGFLYRSGAKSRVHGKGSAARGRLGSVVLASLLLCEVAAAMVGAEAVFFSTLVAAWLVLPAVVGLRNVLDAGCFYMLISLGIVVVVSVASHCAGSRLA
Ga0307414_1153748233300032004RhizosphereLTDLLCRAAAKRRVHAKGCVARGRLGPTLGSLVLASLLLCEVAAAMVGAEAAFFSTIVAAWLILTVVVGLRNVLDAGCFYMLISLGIVVVVEVARYGPISL
Ga0307411_1010244343300032005RhizosphereLTDLLCSAAAKSRVRGKGSVARGRFGPTLESVVLASLLLCEAAAAMVGAEAVFFSTIVAAWLVLPALVESRNVLDAGCFYMLISLGIVVVV
Ga0268251_1003181433300032159AgaveLTGFLYRSGAKGLVHGKGPAARGRLGPKLGSVVLASLLLCEVAAAMVGAEAVFFSTLVAAWLVLPAVVGPKNVLDAGCFYMLVSLGIVVVVHVARYGLISLLA
Ga0268251_1004638133300032159AgaveMDGAARGRVGPKLGSVVLASLLLCEVAAAILGAEAVFFSTTVAAWLVLPAVVGPRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA
Ga0268251_1027254223300032159AgaveLTAHLWRSAAKDRVHGKGGGARGRLGPTLGSLVLALLLLCEVAAAIVGAEAAFFSTILAGWPILTVVVGFRNVLDAGCFYMLISLGIVVVVDVARYGPISLLA
Ga0334911_051671_1_2433300034131Sub-Biocrust SoilMTSLLCRAAAQGRAHGKYGAVRGRLGSVVLASLLICEVASAMVGAQAVFFSTIVAAWIALTAVVGPRNVLDAGCFYMLISH


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.