Metagenome / Metatranscriptome Family F101759

Overview

Basic Information

• Family ID: F101759
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 102
• Average Sequence Length: 43 residues
• Representative Sequence: MRTGNLAAVMKTMGHRDVKTAMHYQHPELDVVRAALDYGAESETAEMRA
• Number of Associated Samples: 84
• Number of Associated Scaffolds: 102

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 63.16 %
• % of genes near scaffold ends (potentially truncated): 10.78 %
• % of genes from short scaffolds (< 2000 bps): 7.84 %
• Associated GOLD sequencing projects: 78
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (81.373 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (25.490 % of family members)
• Environment Ontology (ENVO): Unclassified (37.255 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (49.020 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 49.35%
  β-sheet: 0.00%
  Coil/Unstructured: 50.65%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00589	Phage_integrase	10.78
PF13620	CarboxypepD_reg	3.92
PF07969	Amidohydro_3	2.94
PF01844	HNH	1.96
PF01381	HTH_3	0.98
PF04397	LytTR	0.98
PF00593	TonB_dep_Rec	0.98
PF02517	Rce1-like	0.98
PF07676	PD40	0.98
PF02896	PEP-utilizers_C	0.98
PF12681	Glyoxalase_2	0.98
PF10282	Lactonase	0.98
PF07638	Sigma70_ECF	0.98
PF11535	Calci_bind_CcbP	0.98
PF01252	Peptidase_A8	0.98
PF00512	HisKA	0.98
PF07470	Glyco_hydro_88	0.98
PF05649	Peptidase_M13_N	0.98
PF07883	Cupin_2	0.98
PF00882	Zn_dep_PLPC	0.98
PF02899	Phage_int_SAM_1	0.98
PF01425	Amidase	0.98
PF05015	HigB-like_toxin	0.98
PF13470	PIN_3	0.98
PF00294	PfkB	0.98
PF01557	FAA_hydrolase	0.98
PF02604	PhdYeFM_antitox	0.98
PF07729	FCD	0.98
PF03403	PAF-AH_p_II	0.98
PF08281	Sigma70_r4_2	0.98
PF00578	AhpC-TSA	0.98
PF00892	EamA	0.98
PF03190	Thioredox_DsbH	0.98
PF15937	PrlF_antitoxin	0.98
PF00486	Trans_reg_C	0.98
PF15780	ASH	0.98
PF02586	SRAP	0.98
PF02954	HTH_8	0.98
PF12728	HTH_17	0.98
PF00150	Cellulase	0.98
PF00144	Beta-lactamase	0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0597	Lipoprotein signal peptidase	Cell wall/membrane/envelope biogenesis [M]	1.96
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.98
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.98
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.98
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.98
COG4188	Predicted dienelactone hydrolase	General function prediction only [R]	0.98
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.98
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.98
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.98
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.98
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.98
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.98
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.98
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.98
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.98
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.98
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.98
COG1331	Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains	General function prediction only [R]	0.98
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.98

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.37 %
All Organisms	root	All Organisms	18.63 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.37 %
cellular organisms	root	All Organisms → cellular organisms	18.63 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.37 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	18.63 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.37 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	14.71 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.37 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.92 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.92 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.37 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.37 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.98 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.92 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.98 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300005533|Ga0070734_10000245	All Organisms → cellular organisms → Bacteria	141206
3300010360|Ga0126372_10219338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1603
3300010360|Ga0126372_12122067	All Organisms → cellular organisms → Bacteria → Acidobacteria	610
3300010376|Ga0126381_100030547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	6422
3300012199|Ga0137383_10451306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942
3300020579|Ga0210407_10722775	All Organisms → cellular organisms → Bacteria → Acidobacteria	771
3300020583|Ga0210401_10020642	All Organisms → cellular organisms → Bacteria → Acidobacteria	6327
3300021401|Ga0210393_10089198	All Organisms → cellular organisms → Bacteria → Acidobacteria	2448
3300021432|Ga0210384_10061846	All Organisms → cellular organisms → Bacteria	3383
3300021560|Ga0126371_10000486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	32493
3300021560|Ga0126371_10040705	All Organisms → cellular organisms → Bacteria → Acidobacteria	4402
3300022557|Ga0212123_10000028	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	457915
3300027826|Ga0209060_10000263	All Organisms → cellular organisms → Bacteria	114594
3300028536|Ga0137415_10104258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2687
3300031573|Ga0310915_10925989	All Organisms → cellular organisms → Bacteria → Acidobacteria	610
3300031681|Ga0318572_10984840	All Organisms → cellular organisms → Bacteria → Acidobacteria	501
3300031718|Ga0307474_10000037	All Organisms → cellular organisms → Bacteria	104595
3300031720|Ga0307469_12200913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537
3300031823|Ga0307478_11822939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.06%
Host-Associated	Host-Associated	2.94%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.31%
Aquatic	Environmental → Aquatic	12.75%
Plants	Host-Associated → Plants	2.94%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.31%
Freshwater	Environmental → Aquatic → Freshwater	10.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.94%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.96%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.73%
Loam	Environmental → Terrestrial → Soil → Loam	13.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.86%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.92%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.96%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.49%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300022557	Paint Pots_combined assembly	Environmental
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1005714081	3300004152	Bog Forest Soil	MRTMGHRDVKTAMHYQHPELEVVRAALDYAAPNDIAETRA*
Ga0066395_106584972	3300004633	Tropical Forest Soil	MRTENLAAVMKTMGHRDVKTAMHYQHPELEIVRAALDNADVAIAKMSV*
Ga0066684_100167601	3300005179	Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELDVVRAALDYGAASEPAEMRA*
Ga0066388_1012863761	3300005332	Tropical Forest Soil	AVMKTMGHRDVKTAMHYQHPELDVVRAALDYGAASETAEMRA*
Ga0066388_1032587541	3300005332	Tropical Forest Soil	VMRTMGHRDVRTAMHYQHPELDVVRAALDFDAPADGSEKKV*
Ga0070713_1001373244	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GNLAAVMRTMGHRDVRTAMHYQHPELEIVRAALDYEAVADATETTL*
Ga0070707_1000939661	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VMRTMGHRDVKTAMHYQHPELEVVRAALDYGMPKDIAEMRG*
Ga0070698_1011041342	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRTMGHRDVRTAMHYQHPELELVRAALDYGAVVESNETSVSTE*
Ga0070734_10000245113	3300005533	Surface Soil	MRTGNLVAVMRTMGHRHVKTAMHYQHPELETVRAALD*
Ga0070697_1017856171	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LAAVMKTMEHRDVKTAMHYQHPELEVVRAALDYGAASETAEIRT*
Ga0070665_1003464413	3300005548	Switchgrass Rhizosphere	MLAMGHKDVKTAMQYQHPEIEIVRATINEGESVTA*
Ga0066903_1083769841	3300005764	Tropical Forest Soil	MRTGNLAAVMKTMGHRDVKSAMHYQRPELDVVRAALDWGAESETAETRA*
Ga0075285_10115022	3300005890	Rice Paddy Soil	MRTGNLAAVMRTMGHRDVKTAMHYQNPELEVVRAALDYSMPNNIAEI*
Ga0070717_100015225	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGHRDVKTAMHYQHPELDVVRAALDCGAATETAEMRA*
Ga0070716_1003062621	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MGHRDVKTAMHYQHPELDVVRAALDCGAATETSEMRA*
Ga0070712_1007223032	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRTGNLAAVMKTMGHRDAKTAMHYQHPELDVVRAALDYRAASETTEMRA*
Ga0066665_101308611	3300006796	Soil	MKTMGHRDVKTAMHYQHPEQEIVRAALDYNASVKRAEIIRV*
Ga0075433_110030672	3300006852	Populus Rhizosphere	RVLMRTGNLAAVMKTMGHRDVKTAMQYQHPELEVVRSALDYIAESEAVEMRA*
Ga0075425_1000415373	3300006854	Populus Rhizosphere	MKTMGHRDVKTAMQYQHPELEVVRSALDYIAESEAVEMRA*
Ga0102924_100170211	3300007982	Iron-Sulfur Acid Spring	MKTMGHRDVKTAMHYQHPELDVVHAALDYGAAGEAAEMRR*
Ga0099829_100284221	3300009038	Vadose Zone Soil	TMGHRDVKTAMHYQHPELEIVRDALDYNAGTKGAEITV*
Ga0116111_10764431	3300009616	Peatland	MRTGNLAAVMKTMGHRDVKTAMHYQHPELGVVRAALDYGATTETAEIRA*
Ga0116126_12754901	3300009640	Peatland	MGHRDVKTAMRYQHPELEVVRAALDYGTASETAEM
Ga0126374_103574631	3300009792	Tropical Forest Soil	MRTMGHRDVRTAMHYQHPELDVVRAALDFDAPADGSEKKV*
Ga0126384_102600851	3300010046	Tropical Forest Soil	TMGHRDVKTAMQYQHPELEVVRAALDYGMPNDVVAVRA*
Ga0126373_100064937	3300010048	Tropical Forest Soil	MRTGNLAAVMKTMGHRDVKPAMHFQHPELDVVRAALDYGVASETAEMRA*
Ga0126373_1001424214	3300010048	Tropical Forest Soil	MRTGNLAAVMSTMGHRDVKTAMHYQHPEVEVVRVALDYGMPNNIGEMRV*
Ga0126373_100326452	3300010048	Tropical Forest Soil	MKTMGHRDVKTAMHYQHPELDVVRAALDYGAESETAEMQV*
Ga0126373_100986882	3300010048	Tropical Forest Soil	MGHRDVKTAMHYPHPEVEVVRAALDYGMPNNIGEMRV*
Ga0126373_119994942	3300010048	Tropical Forest Soil	MKTMGHRDVKTAMNYQHPELDVVRDALDNGPASEVAEMRA*
Ga0126373_120909352	3300010048	Tropical Forest Soil	MRTGNLAAVMKAMGHRDVKTAMNYQHPELDIVRAAPDYTANSAQIRV*
Ga0126370_100176798	3300010358	Tropical Forest Soil	GHRDVKTAMHYPHPEVEVVRVALDYGMPNNIGEMRV*
Ga0126372_102193381	3300010360	Tropical Forest Soil	MRTGNLAAVMKTMGHSDVKAMHYQHPELDVVRAALD
Ga0126372_109403402	3300010360	Tropical Forest Soil	TGNLAAVMRTMGHRDVKTAMHYQHPELEVVRAALDYGMPNDVVAVRA*
Ga0126372_121220671	3300010360	Tropical Forest Soil	AVLTKTGNLPAVMKTMGHKDVRAAMHYQHPDLEIVRAL*
Ga0126378_101816564	3300010361	Tropical Forest Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEVVRVALDYGMPNDVVAVRA*
Ga0126378_123850342	3300010361	Tropical Forest Soil	MKTMGHHDVKTAMHYQHPELEVVRAALDYDVPVDKTEMKGAGKRLAAHSM
Ga0126377_110100241	3300010362	Tropical Forest Soil	TGNLAAVMRTMGHRDVRAALHYQHPEVEVVRAALDGMPNNIGEMRV*
Ga0126379_102032923	3300010366	Tropical Forest Soil	MRTGNLAAVMRTMGHRNVKTAMQYQHPEIEVVRAGLDYAAPNDIAETRV*
Ga0126379_132008121	3300010366	Tropical Forest Soil	GNLAAVMRTMGHRDVRTAMHYQHPELEVVRAALDFDAPADSSEKKV*
Ga0126381_1000305474	3300010376	Tropical Forest Soil	MRTGNLAAVMKTMGHSDVKAMHYQHPELDVVRAALDC
Ga0126381_1009851281	3300010376	Tropical Forest Soil	GTRVLMRTRNLAAVMKTMGHGDVKTATHCQHPELDVVRAALDYGAANETVEMRE*
Ga0136449_1043044841	3300010379	Peatlands Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELEIVRAALDYGAATDTTETSV*
Ga0126383_100202253	3300010398	Tropical Forest Soil	MRTGNLAAVMKTMGHSDVKAMHYQHPELDVVRAALDCDAPADTTESGLSAKS*
Ga0126383_100606732	3300010398	Tropical Forest Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELDVVRAALDYGAESETAEMRA*
Ga0137388_100881331	3300012189	Vadose Zone Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELEIVRAALDYNADAATADIRV*
Ga0137383_104513061	3300012199	Vadose Zone Soil	TGNLAAVMKTMGHRDVKTAMHYQHPELEIVRAALDNTPGAPNAEVRV*
Ga0137380_116760401	3300012206	Vadose Zone Soil	LAAVMKTMGHRDVRTAMHYQDPELEIVRAALDYNAGAKGAELSV*
Ga0137379_111928372	3300012209	Vadose Zone Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELEIVRAALDYNASPAAVEI
Ga0137384_103379061	3300012357	Vadose Zone Soil	RTMGHRDVKTAMHYQHPELEIVRAALDYGVPNEVAEARV*
Ga0137384_111721391	3300012357	Vadose Zone Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELEIVRAALDYNASPAAVEISV*
Ga0137361_101763654	3300012362	Vadose Zone Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELDVVRAALDYNTANETAEMRA*
Ga0137390_114687472	3300012363	Vadose Zone Soil	MKTMGHRDVKTAMHYQHPELEIVRAALDYNESVNGAETRV*
Ga0137373_112384331	3300012532	Vadose Zone Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPDLEIVRAALDYSAGAKGAEMTV*
Ga0137359_101116563	3300012923	Vadose Zone Soil	MKTMGHRDVKPAMHYQHPELEIVRAALDYGATSVIGET*
Ga0126375_108616992	3300012948	Tropical Forest Soil	MRTGNLAAVMRTMGHRDVKTAMQYQHPELEVVRAALDYGMPNDVVAVRA*
Ga0126369_136371341	3300012971	Tropical Forest Soil	MGHRDVKTAIDYQHPELEIVRAALDYSAGASNAEMRM*
Ga0181533_100491310	3300014152	Bog	MGHRDVKTAMRYQHPELEVVRAALDYGTASETAEMRA*
Ga0182038_115424831	3300016445	Soil	YRTRVLMRTGNLAAVMRTMGHRDVKTAMHYQHPELEVVRAALDYGTESSAVEMRV
Ga0187802_101469043	3300017822	Freshwater Sediment	MGHRDVKTAMHYQHPELEVVRAALDHGMPNDIAETRV
Ga0187818_102459272	3300017823	Freshwater Sediment	MRTGNLAAVMKTMGHRDVKTAMHYQHTELDVVRAALDYDAASETAEI
Ga0187817_107564331	3300017955	Freshwater Sediment	MRTMGHRDVRAAMHYQHPELEIVRAALDKSEATDAIETRV
Ga0187816_101116291	3300017995	Freshwater Sediment	VMKTMGHRDVKTAMHYQHPELEVVRAALDSGPANETAALRV
Ga0187872_100247033	3300018017	Peatland	MGHRDVKTAMRYQHPELEVVRAALDYGTASETAEMRA
Ga0187857_104889882	3300018026	Peatland	MRTGNLAAVMKTMGHRDVKTAMHYQHPELGVVRAALDYGATTETAEIRA
Ga0187858_102303101	3300018057	Peatland	MRTGNLAAVMKTMGHRDVKTAMHYQHPELGVVRAALYYGATTETAEIRA
Ga0187784_100173338	3300018062	Tropical Peatland	MRTMGHRDVKTAMHYQHPELEVVRAALDYGMPNDTAMQE
Ga0187769_100025046	3300018086	Tropical Peatland	MKTMGHRDVKTAMHYQHPELEIVRAALDYGEEANTTETGA
Ga0187771_100709393	3300018088	Tropical Peatland	VMKTMGHRDVKTAMHYQHPELEIVRAALDYGEEANTTETGA
Ga0187771_108498641	3300018088	Tropical Peatland	MKTMGHRDVKTAMHYQHPELDVVRAALDYGAANEPAEMRA
Ga0187770_108850771	3300018090	Tropical Peatland	MGHRDVKTAMHYQHPELDVVRAALDWGSASETAELRV
Ga0066667_107635692	3300018433	Grasslands Soil	MKTMGHRDVKTAMHYQHPEQEIVRAALDYNASVKRAEIIRV
Ga0206352_100027363	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MKVMGHKDVRTAMRYQHPELDIVRDALNNQTAVVQ
Ga0210407_107227752	3300020579	Soil	MRTGNLAAVMRTMGHRDVKTAMPYQHPELEIVRAAL
Ga0210401_100206422	3300020583	Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDTVRQSLK
Ga0210393_100891984	3300021401	Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELVIVRAALD
Ga0210384_100618464	3300021432	Soil	MRTGNLAAVMRTMGHRDVRTAMHYQHPELEIVGAALDYGAPPDSNEPTVLAG
Ga0126371_100004864	3300021560	Tropical Forest Soil	MRTGNLAAVMKTMGHRDVKSAMHYQRPELDVVRAALDWGAESETAETRA
Ga0126371_100407055	3300021560	Tropical Forest Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELEIVRAALDSALVSE
Ga0126371_131234561	3300021560	Tropical Forest Soil	MRTGNLAAVMKAMGHRDVKTAMNYQHPELDIVRAAPDYTANSAQIRV
Ga0212123_10000028248	3300022557	Iron-Sulfur Acid Spring	MKTMGHRDVKTAMHYQHPELDVVHAALDYGAAGEAAEMRR
Ga0207692_101061994	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRTGNLAAVMKTMGHRDAKTAMHYQHPELDVVRAALDYSAES
Ga0207693_102144953	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MGHRDVKTAMHYQHPELDVVRAALDCGAATETAEMRA
Ga0207646_100381521	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	NLAAVMRTMGHRDVKTAMHYQHPELEVVRAALDYGMPKDIAEMRG
Ga0209154_100036612	3300026317	Soil	MRTGNLAAVMKTMGHRDVKAAMHYQHPELDVVRAALDYGAASETVERRA
Ga0209473_10271384	3300026330	Soil	TRVLMRTGNLAAVMKTMGHRDVKTAMHYQHPELDVVRAALDYGAASEPAEMRA
Ga0209161_102962011	3300026548	Soil	TGNLAAVMKTMGHRDVKTAMHYQHPELDVVRAALDYGAASEPAEMRA
Ga0209060_1000026313	3300027826	Surface Soil	MRTGNLVAVMRTMGHRHVKTAMHYQHPELETVRAALD
Ga0209180_102309402	3300027846	Vadose Zone Soil	MKTMGHRDVKTAMHYQHPELEIVRAALDYNESAKGAEMRV
Ga0137415_101042585	3300028536	Vadose Zone Soil	MRTGNLAAVMRTMGHRDVKTAMRYQHPELETVRAALRRL
Ga0310915_109259891	3300031573	Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELDVVRVARITARQ
Ga0318572_109848402	3300031681	Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELDVVRVAR
Ga0307476_1000042330	3300031715	Hardwood Forest Soil	MGHHDVKTAMQYQHPELEIVRAALDYGASSTKSAA
Ga0310813_115376401	3300031716	Soil	MGHRDVKIAMHYQHPELDVVRAALDYGTASETGGMRA
Ga0307474_1000003798	3300031718	Hardwood Forest Soil	MRIGNLAVVMRTMGHRDVKTATHYQHPELEVVRAALDYGAPNDAAEARA
Ga0307474_1000017454	3300031718	Hardwood Forest Soil	MGHRDVKTAMHYQHPELEIVRAALDYGASSTKSAA
Ga0307474_100257246	3300031718	Hardwood Forest Soil	MRTGNLSAVMKTMGHRDVKTAMHYQPPELDVARAALDYGTASESAEIQA
Ga0307469_122009132	3300031720	Hardwood Forest Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALD
Ga0307478_118229392	3300031823	Hardwood Forest Soil	MRTGNLAAAMRTMGHRDVKTAMHYQHPELEIVRADARL
Ga0310917_107110901	3300031833	Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELDVVRAALDYGGAGETAEMRA
Ga0310910_110337681	3300031946	Soil	HRDVKTAMHYQHPELEIVRAALDYRAGANSAQIRV
Ga0335069_102665692	3300032893	Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELDVVRAALDFGAAGETAEMRA