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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F101658 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 102 |
| Average Sequence Length | 71 residues |
| Representative Sequence | MQLPYLFVAVSLDGKLIGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGQVTFRYS |
| Number of Associated Samples | 84 |
| Number of Associated Scaffolds | 102 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 47.06 % |
| % of genes near scaffold ends (potentially truncated) | 8.82 % |
| % of genes from short scaffolds (< 2000 bps) | 13.73 % |
| Associated GOLD sequencing projects | 78 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (95.098 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (22.549 % of family members) |
| Environment Ontology (ENVO) | Unclassified (28.431 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (48.039 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 46.05% Coil/Unstructured: 53.95% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 102 Family Scaffolds |
|---|---|---|
| PF05559 | DUF763 | 2.94 |
| PF03328 | HpcH_HpaI | 0.98 |
| PF13458 | Peripla_BP_6 | 0.98 |
| PF01431 | Peptidase_M13 | 0.98 |
| PF04430 | DUF498 | 0.98 |
| PF00589 | Phage_integrase | 0.98 |
| COG ID | Name | Functional Category | % Frequency in 102 Family Scaffolds |
|---|---|---|---|
| COG1415 | Uncharacterized conserved protein, DUF763 domain | Function unknown [S] | 2.94 |
| COG0469 | Pyruvate kinase | Carbohydrate transport and metabolism [G] | 0.98 |
| COG1504 | Uncharacterized conserved protein, DUF498 domain | Function unknown [S] | 0.98 |
| COG2301 | Citrate lyase beta subunit | Carbohydrate transport and metabolism [G] | 0.98 |
| COG3590 | Predicted metalloendopeptidase | Posttranslational modification, protein turnover, chaperones [O] | 0.98 |
| COG3737 | Uncharacterized protein, contains Mth938-like domain | Function unknown [S] | 0.98 |
| COG3836 | 2-keto-3-deoxy-L-rhamnonate aldolase RhmA | Carbohydrate transport and metabolism [G] | 0.98 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 95.10 % |
| All Organisms | root | All Organisms | 4.90 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 22.55% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 13.73% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 7.84% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 5.88% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.88% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 3.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.94% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.94% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.94% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 2.94% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.94% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.94% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.96% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.96% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.96% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.98% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.98% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 0.98% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.98% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.98% |
| Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.98% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.98% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.98% |
| Tropical Rainforest Soil | Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil | 0.98% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2088090014 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000891 | Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil | Environmental | Open in IMG/M |
| 3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005363 | Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
| 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
| 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
| 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
| 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
| 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
| 3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
| 3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300012895 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2 | Environmental | Open in IMG/M |
| 3300012896 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2 | Environmental | Open in IMG/M |
| 3300012897 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1 | Environmental | Open in IMG/M |
| 3300012901 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1 | Environmental | Open in IMG/M |
| 3300012908 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1 | Environmental | Open in IMG/M |
| 3300012911 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2 | Environmental | Open in IMG/M |
| 3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
| 3300015201 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300016387 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 | Environmental | Open in IMG/M |
| 3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
| 3300019361 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2) | Environmental | Open in IMG/M |
| 3300019362 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2) | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
| 3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
| 3300031793 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21 | Environmental | Open in IMG/M |
| 3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
| 3300031897 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16 | Environmental | Open in IMG/M |
| 3300031944 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1 | Environmental | Open in IMG/M |
| 3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
| 3300034820 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 | Host-Associated | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| GPIPI_01119650 | 2088090014 | Soil | MQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPNALATMPMPINVMIVDATGQANCALISGPGQVTFRYS |
| JGI10214J12806_114026122 | 3300000891 | Soil | AEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0065705_102318292 | 3300005294 | Switchgrass Rhizosphere | MQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPNALATMPMPINVMIVDATGQANCALISGPGQVTFRYS* |
| Ga0066388_1030978813 | 3300005332 | Tropical Forest Soil | MQLPYLFVAVSLDGMLMGVRFTEAEDSDGLDAQPIAGNPNALASMSMPINVMIVDATGQATCALISGPRQVTFRYS* |
| Ga0068868_1021722281 | 3300005338 | Miscanthus Rhizosphere | MQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS* |
| Ga0070671_1002512102 | 3300005355 | Switchgrass Rhizosphere | MQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQVTCVLLSGPGQVRFRYS* |
| Ga0008090_141192832 | 3300005363 | Tropical Rainforest Soil | VAVSLDGKVMGVRFTEAEEGDGLDTQPIAGNPNALATMPMPLNVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0070688_1002785282 | 3300005365 | Switchgrass Rhizosphere | VSLDDRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPVQVRFRYS* |
| Ga0070667_1013564352 | 3300005367 | Switchgrass Rhizosphere | MQLPYLFVAVSLDDRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS* |
| Ga0070709_103994921 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALWPGAVMFRYS* |
| Ga0070709_111439402 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | RGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0070714_1023295261 | 3300005435 | Agricultural Soil | MQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCAL |
| Ga0070707_1021452811 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | VRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS*H*AETYLAQTPL |
| Ga0068854_1000535413 | 3300005578 | Corn Rhizosphere | MGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQVTCVLLSGPGQVRFRYP |
| Ga0068856_1008311651 | 3300005614 | Corn Rhizosphere | ECYSRGMRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0066903_1051352201 | 3300005764 | Tropical Forest Soil | MQLPYLFVAVSLDGKLIGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0068860_1002366051 | 3300005843 | Switchgrass Rhizosphere | NEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS* |
| Ga0070712_1000450683 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGAVMFRYS* |
| Ga0075431_1001771294 | 3300006847 | Populus Rhizosphere | GMQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS* |
| Ga0075434_1004471402 | 3300006871 | Populus Rhizosphere | VAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS* |
| Ga0075419_100607072 | 3300006969 | Populus Rhizosphere | MQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQVTCVLLSGPGQVRFR* |
| Ga0075419_114843781 | 3300006969 | Populus Rhizosphere | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGHVTFRYS* |
| Ga0105245_104855213 | 3300009098 | Miscanthus Rhizosphere | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0114129_112271332 | 3300009147 | Populus Rhizosphere | MRLPYLFVAVSLDGKLIGVRFSEAEEGARLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0105243_109492871 | 3300009148 | Miscanthus Rhizosphere | MQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSG |
| Ga0111538_127675541 | 3300009156 | Populus Rhizosphere | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALIPGPGQVTFRYS* |
| Ga0105248_119532062 | 3300009177 | Switchgrass Rhizosphere | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGPGQVTF |
| Ga0105249_122454391 | 3300009553 | Switchgrass Rhizosphere | DGKLIGVRFSAAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0105249_124284662 | 3300009553 | Switchgrass Rhizosphere | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGPGQV |
| Ga0126380_100198515 | 3300010043 | Tropical Forest Soil | MQFPYLFVAVSLDGKLIGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVIIVDATGQATCALISGPGQVTFRYS* |
| Ga0126380_116143631 | 3300010043 | Tropical Forest Soil | MQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPLPINVMIVDATGQAACALISSRDG* |
| Ga0126384_103034162 | 3300010046 | Tropical Forest Soil | MQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0126384_106349892 | 3300010046 | Tropical Forest Soil | LFVAVSLDGKLSGVRFTEAEDNDGLDAVPIAGNPNALATMPMPINVMIVDATGQAACALISCPGQVTFRYP* |
| Ga0126382_102704661 | 3300010047 | Tropical Forest Soil | MQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPTALATMPMPINVMIVDATAQATCALISGPGAVMFRYS* |
| Ga0126382_122587711 | 3300010047 | Tropical Forest Soil | MQLPYLFVAVSLDGKLIGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALI |
| Ga0126373_111426721 | 3300010048 | Tropical Forest Soil | MQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVIIVDATGQATCALISGPGQVTFRYS* |
| Ga0126373_127599891 | 3300010048 | Tropical Forest Soil | MQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQATCALISGPGR* |
| Ga0126370_119442452 | 3300010358 | Tropical Forest Soil | MQLPFLFVAVSLDGKLIGVRFTAAEDSQGLDAVPIAGNPNAIATMPMPINLMIVDATGQAACALISCPGQVTFRYP* |
| Ga0126372_108368622 | 3300010360 | Tropical Forest Soil | MQLPYLFVAVSLDGKVMGVRFTEAEEGDGLDAQPIAGNPNALATMPMPLNVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0126378_107707362 | 3300010361 | Tropical Forest Soil | MQLPYLFVAVSLDGKLIGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVIIVDATGQATCALISGPGQVTFRYS* |
| Ga0126377_123377842 | 3300010362 | Tropical Forest Soil | KLIGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGAVMFRYS* |
| Ga0126377_124734562 | 3300010362 | Tropical Forest Soil | YLFVAVSLDGRVMGVRFTEREDGDGLDAQPIAGNPNALATMPKPLNVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0126377_126112951 | 3300010362 | Tropical Forest Soil | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0126379_135884852 | 3300010366 | Tropical Forest Soil | FVAVSLDGKVMGVRFTEAEEGDGLDAQPIAGNPNALATMPMPLSAMIIDATGQATCVLLSGPGQVRFRYS* |
| Ga0134125_111188292 | 3300010371 | Terrestrial Soil | MRLPYLFVAVSLDGKLMGVRFTEAEEGNGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRY |
| Ga0134128_105425292 | 3300010373 | Terrestrial Soil | MQLPYLFVAVSLVDRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS* |
| Ga0105239_127304331 | 3300010375 | Corn Rhizosphere | MRLPYLFVAVSLDGKLIGVRFSAAEEGDGLDAQPIAGNPNAVATMPLPINVMIIDATGQATCALISGPGQVTFRYS* |
| Ga0126381_1011998831 | 3300010376 | Tropical Forest Soil | MQLPFLFVAVSLDGKLIGVRFTAAEDSQGLDAVPIAGNPNAIATMPMPINLMIVDATGQAACA |
| Ga0134124_119789411 | 3300010397 | Terrestrial Soil | MRLPYLFVAVSLDGKLIGVRFTEAEEGGGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0134124_120883532 | 3300010397 | Terrestrial Soil | MQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVSFRYS* |
| Ga0126383_130424082 | 3300010398 | Tropical Forest Soil | TAAEDSQGLDAVPIAGNPNAIATMPMPINLMIVDATGQAACALISCPGQVTFRYP* |
| Ga0134127_103174031 | 3300010399 | Terrestrial Soil | MQLTYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLFSGPGQVRFRYS* |
| Ga0134121_104224391 | 3300010401 | Terrestrial Soil | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0105246_122315112 | 3300011119 | Miscanthus Rhizosphere | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATC |
| Ga0157309_102349242 | 3300012895 | Soil | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISVPGQVTFRYS* |
| Ga0157303_100270863 | 3300012896 | Soil | MQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATSQDR* |
| Ga0157285_100105823 | 3300012897 | Soil | MQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPKWLATMPMRLNVMNATGQVTCVLLSGPGQVRFRYS* |
| Ga0157285_101088361 | 3300012897 | Soil | MRLPYLFVAVSLDGKLIGVRFTAAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCTLISGPGQVTFRYS* |
| Ga0157288_100800271 | 3300012901 | Soil | MQLPYLFVAVSLDDRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGP |
| Ga0157288_103327981 | 3300012901 | Soil | MRLPYLLVAVSLDGKLIGVRFSEAKEGDRLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0157286_100074632 | 3300012908 | Soil | MRLPYLFVAVSLDGKLIGVRFTAAEEGDGLDAQPIAGNPNAVATMPMPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0157301_100150922 | 3300012911 | Soil | MQLPYLFVAVSLDGRIMGVRFNEGEMARAWRRSLSLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS* |
| Ga0157301_103448792 | 3300012911 | Soil | EGDGLDAQPIAGNPNAVAAMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0126375_102282581 | 3300012948 | Tropical Forest Soil | MQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPVNVMIVDTIGQATCALISGPGAVMFRYS* |
| Ga0126375_102543001 | 3300012948 | Tropical Forest Soil | MQLPYLFVAVSLDGKLIGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALIAGPGQVTFRYS* |
| Ga0126369_105476353 | 3300012971 | Tropical Forest Soil | GMGAMDSLPTSYLLVAVSLDGKVMGVRFTEAEDGGGLNAQPIAGNANALATMPMTLDVMIVDATSQLRLISGPGQVSFRYS* |
| Ga0126369_129815092 | 3300012971 | Tropical Forest Soil | MQLPYLFVAVSLDGRVMGVRFTEGEDGDGLDAQPIAGNPNALATMPMPLNVMIVDATGQATCALILGPGQVTFRYS* |
| Ga0163162_107231952 | 3300013306 | Switchgrass Rhizosphere | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQATCALISGPGHVTFRYS* |
| Ga0163163_111764713 | 3300014325 | Switchgrass Rhizosphere | LIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIIDATGQATCALISGPGQVTFRYS* |
| Ga0157380_105240961 | 3300014326 | Switchgrass Rhizosphere | AEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0157380_118196292 | 3300014326 | Switchgrass Rhizosphere | SRGMQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQVTCVLLSGPGQVRFRYS* |
| Ga0157376_110116731 | 3300014969 | Miscanthus Rhizosphere | MQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGP |
| Ga0157376_123597411 | 3300014969 | Miscanthus Rhizosphere | MRLPYLFVAVSLDGKLIGVRFSEAEEGDRLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0173483_106346651 | 3300015077 | Soil | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAVATMPLPINVMIVDATGQATC |
| Ga0173478_104432262 | 3300015201 | Soil | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0132258_125427364 | 3300015371 | Arabidopsis Rhizosphere | VLEECYSRGMRLPYLFVAVSLDGKLMGVRFTEAEEGNGLDAQPIAGNPNAVATMPLPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0132256_1019638401 | 3300015372 | Arabidopsis Rhizosphere | FVAVSLDGKLIGVRFTEAEDGEGLDAQPIAGNPNALATMPMPINVMIVDATGQATCALISGPGR* |
| Ga0132257_1034075831 | 3300015373 | Arabidopsis Rhizosphere | EECCARGMQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPSALATMPMPINVMIVDATGQATCALISGPGQVTFRYS* |
| Ga0132255_1051320301 | 3300015374 | Arabidopsis Rhizosphere | SYLLVAVSLDGKVMGVRFTEAEDGGGLNAQPIAGNANALATMPMPLDVMIVDATSQLRLISGPGQVSFRYS* |
| Ga0182040_100950161 | 3300016387 | Soil | VRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISGPGQATFRYP |
| Ga0182038_114697051 | 3300016445 | Soil | KLIGVRFTAAEDSQGLDAVPIAGNPNAIATMPMPINLMIVDATGQAACALISCPGQVTFRYP |
| Ga0173482_100111923 | 3300019361 | Soil | MQLPYLFVAVSLDDRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS |
| Ga0173479_103929561 | 3300019362 | Soil | VSLDGRVMGVRFTEAEDGQGLDAQPIAGNPNALATMPMPINVMIVDATGQATCALISGPGQVTFRYS |
| Ga0126371_101863584 | 3300021560 | Tropical Forest Soil | SRGMQLPFLFVAVSLDGKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISCRGQVTFRYP |
| Ga0126371_106330821 | 3300021560 | Tropical Forest Soil | MGVRFTEGEDGDGLDAQPIAGNPNALATMPMPLNVMIVDATGQATCALISGPGQVTFRYS |
| Ga0207699_112682521 | 3300025906 | Corn, Switchgrass And Miscanthus Rhizosphere | VRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS |
| Ga0207693_100349831 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRYS |
| Ga0207649_107906582 | 3300025920 | Corn Rhizosphere | MQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCV |
| Ga0207687_117850051 | 3300025927 | Miscanthus Rhizosphere | YLFVAVSLDDRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQVTCVLLSGPGQVRFRYS |
| Ga0207668_106530052 | 3300025972 | Switchgrass Rhizosphere | MRLPYLFVAVSLDGKLIGVRFTEAEEGDGLDAQPIAGNPNAIATMPLPINVMIVDATGQATCALISGPGQVTFRCS |
| Ga0207640_103439762 | 3300025981 | Corn Rhizosphere | STRPNCHSRECYSRGMQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQVTCVLLSGPGQVRFRYP |
| Ga0207428_107272722 | 3300027907 | Populus Rhizosphere | TRPNCHSRECYSRGMQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS |
| Ga0209382_108471041 | 3300027909 | Populus Rhizosphere | IMGIRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRY |
| Ga0268264_106160841 | 3300028381 | Switchgrass Rhizosphere | NEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS |
| Ga0310886_107964482 | 3300031562 | Soil | MGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQVTCVLLSGPDR |
| Ga0310813_105491161 | 3300031716 | Soil | MQLPYLFVAVSLDGRIMGVRFNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQVTCVLLSGPGQVRFRYS |
| Ga0318548_106717731 | 3300031793 | Soil | MQLPYLFVAVSLDGRVMGVRFTEAEDGEGLDAQPIAGNPNALATMPMPMPINVMIVDATGQATCALISCSAWSRESRRL |
| Ga0310892_108577121 | 3300031858 | Soil | LTAGSWAYAEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS |
| Ga0318520_108918702 | 3300031897 | Soil | LPYLFVAVSLDGKVMGVRFTEAEDGDGLDAQPIVGNPNALATMPMPLNVMIVDATGQATCAVISGPGQVTFRYA |
| Ga0310884_101923131 | 3300031944 | Soil | FNEGEDGEGLEAQPIAGNPNLLATMPMRLNVMIIDATGQATCVLLSGPGQVRFRYS |
| Ga0318533_111571791 | 3300032059 | Soil | GKLIGVRFTAADDSDGLDAVPIAGNPNAIATMPMPINVMIVDATGQAACALISRPGQVTFRYP |
| Ga0373959_0205240_29_259 | 3300034820 | Rhizosphere Soil | MRLPYLFVAVSLNGKLIGVRFTEAEEGDGLDAQPIAGNPNALATMPLPINVMIVDATGQAICALISGPGQVTFRYS |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |