NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F101638

Metagenome / Metatranscriptome Family F101638

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F101638
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 82 residues
Representative Sequence VVPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQARGVAAELLKTGIADGDGSPRAIKLELHTIVL
Number of Associated Samples 85
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 8.91 %
% of genes near scaffold ends (potentially truncated) 92.16 %
% of genes from short scaffolds (< 2000 bps) 88.24 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.059 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(23.529 % of family members)
Environment Ontology (ENVO) Unclassified
(36.275 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(57.843 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.83%    β-sheet: 20.75%    Coil/Unstructured: 76.42%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF00230MIP 25.49
PF03976PPK2 1.96
PF00196GerE 1.96
PF01982CTP-dep_RFKase 1.96
PF09269DUF1967 1.96
PF04966OprB 0.98
PF01276OKR_DC_1 0.98
PF03729DUF308 0.98
PF13561adh_short_C2 0.98
PF06736TMEM175 0.98
PF14449PT-TG 0.98
PF14534DUF4440 0.98
PF00211Guanylate_cyc 0.98
PF12706Lactamase_B_2 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0580Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)Carbohydrate transport and metabolism [G] 25.49
COG1339Archaeal CTP-dependent riboflavin kinaseCoenzyme transport and metabolism [H] 3.92
COG2326Polyphosphate kinase 2, PPK2 familyEnergy production and conversion [C] 1.96
COG0112Glycine/serine hydroxymethyltransferaseAmino acid transport and metabolism [E] 0.98
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 0.98
COG1982Arginine/lysine/ornithine decarboxylaseAmino acid transport and metabolism [E] 0.98
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.98
COG3247Acid resistance membrane protein HdeD, DUF308 familyGeneral function prediction only [R] 0.98
COG3548Uncharacterized membrane proteinFunction unknown [S] 0.98
COG3659Carbohydrate-selective porin OprBCell wall/membrane/envelope biogenesis [M] 0.98


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.06 %
UnclassifiedrootN/A2.94 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886015|FOassembled-_contig27305All Organisms → cellular organisms → Bacteria585Open in IMG/M
2170459003|FZN2CUW02JUJDLAll Organisms → cellular organisms → Bacteria520Open in IMG/M
2209111022|2221196088Not Available860Open in IMG/M
3300000956|JGI10216J12902_111787384All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium739Open in IMG/M
3300000956|JGI10216J12902_117861375All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium605Open in IMG/M
3300001145|JGI12682J13319_1003392All Organisms → cellular organisms → Bacteria → Proteobacteria1558Open in IMG/M
3300004480|Ga0062592_101874102All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300005166|Ga0066674_10463776All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300005175|Ga0066673_10092097All Organisms → cellular organisms → Bacteria1613Open in IMG/M
3300005175|Ga0066673_10875709All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300005179|Ga0066684_10071689All Organisms → cellular organisms → Bacteria2051Open in IMG/M
3300005179|Ga0066684_10518492All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300005180|Ga0066685_10163191All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1519Open in IMG/M
3300005180|Ga0066685_10886165All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300005294|Ga0065705_10855905All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300005367|Ga0070667_101042577All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300005437|Ga0070710_10544428All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300005445|Ga0070708_101632390All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300005446|Ga0066686_10288175All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300005450|Ga0066682_10727951All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300005540|Ga0066697_10045323All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2480Open in IMG/M
3300005548|Ga0070665_100660388All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300005549|Ga0070704_100661968All Organisms → cellular organisms → Bacteria923Open in IMG/M
3300005555|Ga0066692_10766626All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium595Open in IMG/M
3300005555|Ga0066692_11030098All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300005559|Ga0066700_10979147All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300005560|Ga0066670_10054741All Organisms → cellular organisms → Bacteria2083Open in IMG/M
3300005566|Ga0066693_10104461All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300005719|Ga0068861_102166492All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300005764|Ga0066903_103570921All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300006031|Ga0066651_10238644All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300006031|Ga0066651_10701387All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300006034|Ga0066656_10951760All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300006046|Ga0066652_100604090All Organisms → cellular organisms → Bacteria1035Open in IMG/M
3300006175|Ga0070712_100596436All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300006796|Ga0066665_10591752All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300007255|Ga0099791_10184732All Organisms → cellular organisms → Bacteria980Open in IMG/M
3300007258|Ga0099793_10266090All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300009012|Ga0066710_103274783All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300009098|Ga0105245_11811150All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300009137|Ga0066709_101408927All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300009137|Ga0066709_101502348All Organisms → cellular organisms → Bacteria972Open in IMG/M
3300010043|Ga0126380_10582849All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300010326|Ga0134065_10058815All Organisms → cellular organisms → Bacteria1202Open in IMG/M
3300010375|Ga0105239_13375845All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300010376|Ga0126381_103194753All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia648Open in IMG/M
3300010398|Ga0126383_11423067All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium783Open in IMG/M
3300011000|Ga0138513_100079373All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium509Open in IMG/M
3300012200|Ga0137382_10210802All Organisms → cellular organisms → Bacteria1337Open in IMG/M
3300012202|Ga0137363_10462478Not Available1062Open in IMG/M
3300012202|Ga0137363_10675349All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300012202|Ga0137363_10692812All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus862Open in IMG/M
3300012208|Ga0137376_10809434All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300012208|Ga0137376_11588296All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300012211|Ga0137377_11806914All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300012912|Ga0157306_10121013All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300012922|Ga0137394_10566692All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300012922|Ga0137394_10696208All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium856Open in IMG/M
3300012923|Ga0137359_10023624All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus5236Open in IMG/M
3300012957|Ga0164303_10611452All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium719Open in IMG/M
3300012975|Ga0134110_10031960All Organisms → cellular organisms → Bacteria2058Open in IMG/M
3300014325|Ga0163163_12733902All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300014969|Ga0157376_12673924All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300015359|Ga0134085_10372885All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium637Open in IMG/M
3300015371|Ga0132258_11882799All Organisms → cellular organisms → Bacteria1506Open in IMG/M
3300016294|Ga0182041_10959807All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium771Open in IMG/M
3300018028|Ga0184608_10187881All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300018071|Ga0184618_10099707All Organisms → cellular organisms → Bacteria1137Open in IMG/M
3300018431|Ga0066655_10060895All Organisms → cellular organisms → Bacteria1985Open in IMG/M
3300018468|Ga0066662_12551193All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300018482|Ga0066669_10092735All Organisms → cellular organisms → Bacteria2071Open in IMG/M
3300018482|Ga0066669_10362855All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1209Open in IMG/M
3300018482|Ga0066669_10557396All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300019356|Ga0173481_10288377All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300019882|Ga0193713_1003561All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae5028Open in IMG/M
3300020004|Ga0193755_1170346All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium646Open in IMG/M
3300020018|Ga0193721_1073081All Organisms → cellular organisms → Bacteria893Open in IMG/M
3300021560|Ga0126371_10519657All Organisms → cellular organisms → Bacteria1339Open in IMG/M
3300021560|Ga0126371_12029903All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300021560|Ga0126371_13572172All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300022756|Ga0222622_10132421All Organisms → cellular organisms → Bacteria1584Open in IMG/M
3300022756|Ga0222622_10481712All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300025939|Ga0207665_10237978All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300026324|Ga0209470_1015038All Organisms → cellular organisms → Bacteria4403Open in IMG/M
3300026343|Ga0209159_1067021All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1672Open in IMG/M
3300026498|Ga0257156_1015206All Organisms → cellular organisms → Bacteria1499Open in IMG/M
3300026514|Ga0257168_1142955All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300026540|Ga0209376_1062684All Organisms → cellular organisms → Bacteria2065Open in IMG/M
3300026540|Ga0209376_1080766All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1730Open in IMG/M
3300026551|Ga0209648_10467298All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300026739|Ga0207536_100014All Organisms → cellular organisms → Bacteria1996Open in IMG/M
3300028828|Ga0307312_10650724All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium698Open in IMG/M
3300030844|Ga0075377_11656766All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium525Open in IMG/M
3300030973|Ga0075395_11386279All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300031057|Ga0170834_100423047All Organisms → cellular organisms → Bacteria2075Open in IMG/M
3300031128|Ga0170823_10394839All Organisms → cellular organisms → Bacteria1453Open in IMG/M
3300031716|Ga0310813_10409067All Organisms → cellular organisms → Bacteria1169Open in IMG/M
3300031912|Ga0306921_12538100All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300032180|Ga0307471_101216612All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium917Open in IMG/M
3300032205|Ga0307472_100181385All Organisms → cellular organisms → Bacteria1578Open in IMG/M
3300033475|Ga0310811_10056844All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia5194Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil23.53%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.82%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil8.82%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.92%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.96%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.96%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.96%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.96%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.96%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.98%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.98%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.98%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.98%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.98%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.98%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886015Grass soil microbial communities from Rothamsted Park, UK - FO (Mercury 0.02g/kg) assembledEnvironmentalOpen in IMG/M
2170459003Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2209111022Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichmentEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001145Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011000Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026498Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-AEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026739Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-E (SPAdes)EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300030844Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030973Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FOassembled-_0305.000020702162886015Grass SoilVKVREDDKNLFLLVTDGTEVSAQISQSRACVKDSDAVRIGKRDLQAGGVAAEFLKTGIADGDGSARTVKLELHTMFS
E4A_034296902170459003Grass SoilVKVREQDTDLLLLVADGAKVSAQISQSRARVNDGDAVRIGDLQARRVAAELLKTGIADGD
22220176972209111022Grass SoilVKRDTDLLLLVADGAKVSAQISQSRAGVNDGNVVRIGDLQARRVAAELLKTGIADGDGSPRTIKLELHRIV
JGI10216J12902_11178738423300000956SoilEWKALDVVPVKVRERDNHSFLFVADRAKVSAQISQSSARVNDDDAVRIGERELQAGGIPSELLKTGIADGD*
JGI10216J12902_11786137513300000956SoilLLVTDGAKVSAQISQSGARVNDDDAVRIGEGDLQAGGVATELLKTGIADGNGSPRPIKLELHRIVLKPFLL*
JGI12682J13319_100339223300001145Forest SoilNAEVFAQISHSRAGVNDGDAVRIGERDLQAGGVTPELLETGIADGNGSPRTVELELHRATAFMVWLRLS*
Ga0062592_10187410223300004480SoilMKMREPDADFFLFVADGVEVSTQISQSRACINNGDAIRIGERDLHAGSVAAELLKTGIADGDGTPRAVKLKPHRILLDV
Ga0066674_1046377613300005166SoilVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQASGIAAELLKTGVTDGDGSARTIKLELHTILL*
Ga0066673_1009209733300005175SoilVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIDDLQARRVAAELLKTGIADGNRPPRPIKLELHRIIL*
Ga0066673_1087570923300005175SoilVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQASGIAAELLKTGVTDGDGSARTIKLELHTILL*
Ga0066684_1007168913300005179SoilERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQASGIAAELLKTGVTDGDGSARTIKLELHTILL*
Ga0066684_1051849213300005179SoilVKMRERDYDLFLFAADGSQVSAQISQSRACVDDGDAVRIGERDLQAGGVAAELLKTGIADRDGSARAIKLKLHIIVL*
Ga0066685_1016319113300005180SoilDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQAGGVAAEFLKTGIADGDGSPRAIKLELHRIVL*
Ga0066685_1088616523300005180SoilISRGKERKALDVVPVKVRERDTDLLLLVADGAKVSAQISQSRARVNDGDLVRIGDLQARRVAAELLKTGIADGDGSPRTIKLELHRTVSVKLSPWLASIKLARVF*
Ga0065705_1085590513300005294Switchgrass RhizosphereKALDVVPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQAGGVAAELLKAGIADGDGSPRTIKLELHRLVL*
Ga0070667_10104257713300005367Switchgrass RhizosphereVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQAGGVAAELLKTGIADGDGSPRAVKLELHRIVL*
Ga0070710_1054442823300005437Corn, Switchgrass And Miscanthus RhizosphereLDVVPVKVRERDTDLLLLVADGTKVSAQISQSRARVNDGDLVRIGDLQARRVAAELLKTGIADGDGSPRTIKLKLHKIIL*
Ga0070708_10163239023300005445Corn, Switchgrass And Miscanthus RhizosphereAECQECDFLFGIISRGKERKALDVVPVKVREQDTDLLLLVADGAKVSAQISQSRARVNDGDAVRIGDLQARRVATELLKTGIADGDGSPRPIKLELHRIIL*
Ga0066686_1028817513300005446SoilERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQAGGVAAEFLKTGIADGDGSPRAIKLELHRIVL*
Ga0066682_1072795113300005450SoilERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQAGGVAAEFLKTGIADGDGSARTVKLELHTIVL*
Ga0066697_1004532353300005540SoilVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQAGGVAAEFLKTGIADGDGSPRAIKLELHRIVL*
Ga0070665_10066038833300005548Switchgrass RhizosphereRGKERKALDVVPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQAGGVAAELLKTGIADGDGSPRAVKLELHRIVL*
Ga0070704_10066196833300005549Corn, Switchgrass And Miscanthus RhizosphereDTDLLLLVADGAKVSAQISQSRARVNDGDAVRIGDLQARRVATELLKTGIADGDGSPRPIKLELHRIIL*
Ga0066692_1076662623300005555SoilVPVKMRERDNDLFLLVTDGAKVSAQVSQSRPRVNDGDAVRIGERDLQTRGVAAELLKTGIADGDGSPRTIKLELHATTPLAKM*
Ga0066692_1103009813300005555SoilIISRGKERKALDVVPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQAGGVAAEFLKTGIADGDGSPRAIKLELHRIVL*
Ga0066700_1097914723300005559SoilGKERKALDVVPVKVRERDTDLLLLVADDAKVSAQISQSRAGVNDGDLVRIDDLQARRVAAELLETSIADGN*
Ga0066670_1005474153300005560SoilALDVVPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQASGIAAELLKTGVTDGDGSARTIKLELHTILL*
Ga0070664_10063122213300005564Corn RhizosphereKRKALDVVPVKVRQRDRDLILLMADGAKVLPEVSQPCARVDHDDAVHVGKCDLQTGGVAAEFLETRITNRDGSPRPVKLEFHLVG*
Ga0066693_1010446133300005566SoilDVVPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIDDLQARRVAAELLKTGIADGNRPPRPIKLELHRIIL*
Ga0068861_10216649213300005719Switchgrass RhizosphereDVVPVKVRERDTDLLLLVADGAKVSAQVSQSRAGVNDGDLVRIGDLQARRVPAELLKPGIADRDGSPRTIKLKFHRIWFLRR*
Ga0066903_10357092113300005764Tropical Forest SoilIISWGKERKALDVVPVKVCERDNDLFLLVANGAKVPTQISQSRARVDDGDAVGIGKRDLQAGGVAAELLKTGVADGDGSARPVKLQLHRSVSRR*
Ga0066651_1023864413300006031SoilKALDVVPVKMRERNCYLFLFVADSSQIPSQISESCARVNDGDAVRVGECDLQASRIAAELLKAGITDGDRSPRTIKLELHTIAL*
Ga0066651_1070138723300006031SoilLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQASGIAAELLKTGVTDGDGSARTIKLELHTILL*
Ga0066656_1095176013300006034SoilLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQASGIAAELLKTGVTDGDGSARTIKLELHTILL*
Ga0066652_10060409033300006046SoilPVKMRERNCYLFLFVADSSQIPSQISESCARVNDGDAVRVGECDLQASRIAAELLKAGITDGDRSPRTIKLELHTIAL*
Ga0070712_10059643613300006175Corn, Switchgrass And Miscanthus RhizosphereSGSKERKALDVVPVKVRERDTDLLLLMADGAKVSAQISQSRPGVNNGDLVCIADLQARRVAAELLKTGIADGDGSPRTIKLKLHKIIL*
Ga0066665_1059175213300006796SoilRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQASGIAAELLKTGVTDGDGSARTIKLELHTILL*
Ga0099791_1018473213300007255Vadose Zone SoilTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQARRVAAELLKTGIADGDGSPRTIKLELHRIVL*
Ga0099793_1026609013300007258Vadose Zone SoilRTGSPGYGPGEDNDLFLLVADSAKVSVQIAQSCSRVNDGNAVGIGEGDLQARGVAAELLKAGIADGDGSPRTIKLKLHKIIL*
Ga0066710_10327478313300009012Grasslands SoilERKALDVVPVKVRERDTDLLLLVADGAKVSAQISESRARVNDGDLVRIDDLQAGGVAAELLKTGIADRDRSPRTIKLELHRIVFMKLRFRLARSFQVHKNNN
Ga0105245_1181115023300009098Miscanthus RhizosphereDVVPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIDDLQARGVAAEFLKTSIADGDGSPRTIELKLHRIIL*
Ga0066709_10140892713300009137Grasslands SoilRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQAGGVAAEFLKTGIADGDGSPRAIKLELHRIVL*
Ga0066709_10150234833300009137Grasslands SoilPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIDDLQARRVAAELLKTGIADGNRPPRPIKLELHRIIL*
Ga0126380_1058284913300010043Tropical Forest SoilAERQERNLLPGIISRGKERKALDVVPVKVRERDNDLILLVTDNAKIFAQVSQSRARVDDGDSVRIGKRDLHAGGVAAEFLKAGIADGDGPSRTIKL*
Ga0134065_1005881533300010326Grasslands SoilSRGKERKALDVVPVKVRERDTDLLLLVTHGEKVSAQISQSRAGVNDGDLVRIGDLHAGGVAAELLKTGITDGDGSPRTIKLELHRSVL*
Ga0105239_1337584523300010375Corn RhizosphereSWDKERKALDVVPVKVRERDTDLLLLVADSAKVSAQISQSRARVNDGDAVGIGERDLQARSVAAESLKTGVTDGDGSPRTIKLELHRIVFMKSCPQLARRFQVHKNNN*
Ga0126381_10319475323300010376Tropical Forest SoilEGDNDLFLLVSDGTKVSAQISQPCACVNDGDAVRIGERDLQTRGVAPELLKTGIADGDRSTRTIKLELHTTVLMK*
Ga0126383_1142306733300010398Tropical Forest SoilLDVVPVKVRERDDHLILLVADGTEISTQISQSRASVDDDYAVRVRKRDLQAGGVAAELLKTRIANRDGSPRAVKLKPHRILFR*
Ga0138513_10007937313300011000SoilREALDVVPVKMRERDYDLFLFVADGSQVSAQISQSRACVNDSDAVLIGERDLQASGIAPELLKTGIKDGDGSPRTIKLELHRIVL*
Ga0137382_1021080223300012200Vadose Zone SoilVKVRERDYDLFLFVADDSQVSAQISQSRACINDNDAVRIGERDLQASGIAAEFLKTSITDGDGSPRTIKLELHKIVL*
Ga0137363_1046247823300012202Vadose Zone SoilLVLLVADGAKVSAQISQSRACINNSDTVRIGERDLQAGRVTAELLKTGIADGDRSPRTIKLELHRIVFMTLG*
Ga0137363_1067534913300012202Vadose Zone SoilVVPVKVRERDKDLFLLVADGAKVSAQISQSRARVNDGDAVRIGERDLQARGVAAELLKAGIADGDGSPRAIKLELHKIAFMNVSPGSRASSWHH*
Ga0137363_1069281223300012202Vadose Zone SoilLDVVPVKVRERDNDLFLLVADGEKVSAHISQSRRRVNDGDAVRIGERDLQAGGVAAELLKTGIADGDGSPRTIKL*
Ga0137376_1080943413300012208Vadose Zone SoilPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIDDLQARRVAAELLKTGIADGNRPPRPIKLELHRIVL*
Ga0137376_1158829623300012208Vadose Zone SoilDVVPVKVRERDTDLLLLVADGAQVSAQISQSRAGVNDGDLVRIGDLQARRVAAELLKTSIADRDGSPRTIKLELHRFVFMKLTSHLASINLSHVL*
Ga0137377_1180691413300012211Vadose Zone SoilVKVRERDNELVLLVADGAKVSAQISQSRAGVNDGDLVRIDDLQARGVAAELLKTGIAD
Ga0157306_1012101323300012912SoilFLLVADGAKVSTQISQSRARVNDDDAVRIGERDLQASGIAAELLKTGITDGDGSARTIKLELHTIFL*
Ga0137394_1056669213300012922Vadose Zone SoilKERKALDVVPVKVCERDTDLLLLMADGAKVSAQISQSRAGVNDGDLVRIGDLQARRVAAELLKTGIADGNRPPRPIKLELHRIVS*
Ga0137394_1069620823300012922Vadose Zone SoilKALDVVPVKVCERDTDLLLLMADGAKVSAQISQSRAGVNNGDLVRIGDLQARRVAAEFLKTGIADGDGSPRTIKLELHRIVFMNVSPGSRASSWHH*
Ga0137359_1002362463300012923Vadose Zone SoilVVPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQARGVAAELLKTGIADGDGSPRAIKLELHTIVL*
Ga0164303_1061145223300012957SoilRGKERKALDVVPVKVRERDNDLFLLVADSAKVSAQISQSRARVNDDDAVHIGERDLHTGGVAAELLKTGIADGDGSPRTIKLKLHRIIL*
Ga0134110_1003196013300012975Grasslands SoilKERKALDVVPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQASGIAAELLKTGVTDGDGSARTIKLELHTILL*
Ga0163163_1273390223300014325Switchgrass RhizosphereIISRGKERKALDVVPVKVRERDRDLFLLVADGAKVSAQISQSRARVNDDDAVHIGERDLQAGGVAAELLKTGIADGDGSPRTIELEFHRFVFSEGKS*
Ga0157376_1267392423300014969Miscanthus RhizosphereKERKALDVVPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLIRIGDLQAGGVAAELLKTGIADGDGSPRAVKLELHRIVL*
Ga0134085_1037288513300015359Grasslands SoilKERKTLDVVPVKVRERDTDLLLLVADGAKVSPQISQSCAGVNDGDLVRIGDLQAGGVAAELLKTGIADGDGSPRTIKLELHRIIFMKVSPGSRASSWHVSSDNIA*
Ga0132258_1188279913300015371Arabidopsis RhizosphereRKALDVVPVKVRERDTDLLLLVADGAKVSAQISQSRAGINDGDLIRIGDLQAGGVAAELLKTGIADGDGSPRAVKLELHRIVL*
Ga0182041_1095980713300016294SoilERDNDLILLVTDDAKVFAQVSQSRARVDDGDSVSIGKRDLQAGGVAAELLKTGIADGDGSPRTIKL
Ga0184608_1018788123300018028Groundwater SedimentPGFISRGKERKALDVVPVKVRERDNDLFLLVADGAKVSTQISQSCARVNDDDAVRIGERDLQAGGVAAELLKTGIADRDGSPRTIKLSFIELFL
Ga0184618_1009970733300018071Groundwater SedimentVGKKRKALDVVPVKVRERDGDLILLVADGAKVAAEISHSRSSVDDGDAVHIGERDLQAGGVAAELLKTRIADGDRSPRTVKLKPHRILLRKSNCPRREQEKK
Ga0066655_1006089513300018431Grasslands SoilKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQASGIAAELLKTGVTDGDGSARTIKLELHTILL
Ga0066662_1255119323300018468Grasslands SoilDFLFGIISRGKERKALDVVPVKVRERDTDLLLLVADGAKVSAQISQSRPGVNDGDLVRIGDLQAGGVAAELLKTGIADGDGSPRAIKLELHRIVL
Ga0066669_1009273553300018482Grasslands SoilPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQASGIAAELLKTGVTDGDGSARTIKLELHTILL
Ga0066669_1036285513300018482Grasslands SoilSRGKERKALDVVPVKVRERDDDLFLLVADGAEVSAQISQSRARVKDGDAVGIGERDLQAGGVATELLETGITDGDGSPRTVKFELHRVQVSASDFNPQRL
Ga0066669_1055739633300018482Grasslands SoilPVKVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIDDLQARRVAAELLKTGIADGNRPPRPIKLELHRIIL
Ga0173481_1028837723300019356SoilQECDFLSRIISLGKERKTLDVIPVKVREADDDSVLLVADGAKVSAQISQSRARVNDGDAVRIGDLQARRVAAELLETSIADGD
Ga0193713_100356193300019882SoilSWSKERKTLDVVPVKVGERDSDLFLLVADGAKVSTQISQSCSRVNDCDAVRIGEGDLQAGGVAAELLKTGIADGDGSSRTIKLELHRIVL
Ga0193755_117034613300020004SoilRRGKERKALDVVPVKVRERDEDLFLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQARRVAAELLKTSIADGDGSPRTIELKLHRIIL
Ga0193721_107308113300020018SoilDLFLLVADGEEVSAQISQSRTRVKDSDAVRIGERDLQAGGVAAEFLKTGIADGNGPARTIKLELHTIVS
Ga0126371_1051965713300021560Tropical Forest SoilRQERNLLPGIISRGKERKALDVVPVKVRERDNDLILLVTDNAKIFAQVSQSRARVDDGDSVRIGKRDLQAGGVAAEFLKAGIADGDGPSRTIKL
Ga0126371_1202990323300021560Tropical Forest SoilRQERNLLPGIISRGKERKALDVVPVKVRERDNDLILLVTDDAKVFAQVSQSRARVDDGDSVSIGKRDLQAGGVAAELLKTGIADWDGSPRTIKL
Ga0126371_1357217223300021560Tropical Forest SoilMVPVKVRECDSNLFLLVAHGAKVSAQISQSRARVNNGDLVRIRDLQTGGVSAELLKTGIADGDRSPRTVKLESHRFVSSG
Ga0222622_1013242133300022756Groundwater SedimentPGIISWGKERKALDVVPVKVGECDSDLFLLVADGAKVSTQISQSCSRVNDGDAVGIGEGDLQARGVASELLKTGIADGDGSSRTIKLELHRIVL
Ga0222622_1048171223300022756Groundwater SedimentKERKTLDVVPVKVRERDSDLFLLMADGAKVSTQISQSCSRINDGNAVGIGERDLQARSVAAESLKTGIADGDGSPRTMKLQLHRIAL
Ga0207665_1023797813300025939Corn, Switchgrass And Miscanthus RhizosphereQESDFLSGIISLGKERKTLDVVPVKVRERDDDSVLLVTDGAEVSPQISQSRAGVNDGDAVHICERDLQAGGVPAELLKTCIADGDGSPRPVKLKPH
Ga0209470_101503873300026324SoilMRERDYDLFLFAADGSQVSAQISQSRACVDDGDAVRIGERDLQAGGVAAELLKTGIADRDGSARAIKLKLHIIVL
Ga0209159_106702113300026343SoilRKALDVVPVKMRERDYDLFLFAADGSQVSAQISQSRACVDDGDAVRIGERDLQAGGVAAELLKTGIADRDGSARAIKLKLHIIVL
Ga0257156_101520633300026498SoilIISWGKERKALDVVPVKVRERDEDLFLLVADGAKVSAQISQPRARVNDGDAVRIGERDLQAGGVAAELLETGITDGDGSPRTVKFELHRVVFMKASPYSVSWLALLQRLS
Ga0257168_114295513300026514SoilVVPVKVREPDKDLFLFVADGAKVSAQISQSCSRVNDGDAVRIGERDLQAGGVAAELLETGITDGDGSPRTVKF
Ga0209376_106268413300026540SoilVRERDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQASGIAAELLKTGVTDGDGSARTIKLELHTILL
Ga0209376_108076613300026540SoilRKALDVVPVKVRERDTDLLLLVAHGAKVSAQISQSRAGVNDGDLVRIGDLQAGGVAAEFLKTGIADGDGSPRAIKLELHRIVL
Ga0209648_1046729823300026551Grasslands SoilRERDTDLLLLVADGTKVSAQISQSRARVNDGDLVRIGDLQARGVAAELLKAGIADRDGSPCTIKL
Ga0207536_10001413300026739SoilLPGIVSGGKERKALDVIPVKMRERDYDLFLFVADGSQVSAQISQSRACINDRDAVRIGERDLQAGGVAAELLETGIADWDGSTRT
Ga0307312_1065072413300028828SoilNRQEGDSLLGIISWGKERKALDVVPMKMRERDSDLFLLVADGAKVSAQVSQSRTRVNNGDAVRIGERDLQAGGVTAEFLKTCITDGYRSPSTIKLELHRIVL
Ga0075377_1165676613300030844SoilGKERKALDVVPVKVRERDKDLFLMVADGAEVSAQVSQSRACVNDGDAVRIGERHLQAGCVAAELLKTGIADGD
Ga0075395_1138627913300030973SoilDTDLLLLVADGAKVSAQISQSRAGVNDGDLVRIDELQARRVAAEFLETGIADGDGSPGAIKLKLH
Ga0170834_10042304713300031057Forest SoilCLVPAECQECDFLFGIISLGKERKALDVVPVKVRERDADLLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQARRVAAELLKTSIADGDGSPRPIKLKLHRIIL
Ga0170823_1039483933300031128Forest SoilLLLVADGAKVSAQISQSRAGVNDGDLVRIGDLQARRVAAELLKTSIADGDGSPRTIKLKLHRIIL
Ga0310813_1040906713300031716SoilPVKVRERDTDLLLLVADGAKVSAQISQSRARVNDGDLVRIGDLQARRVAAELLKTGIADGNRPPRPIKLELHKIVL
Ga0306921_1253810013300031912SoilMKMREPDADFFLFVADGVEVSTQISQSRPCINNGDAIRIGERDLQAGGVAAELLKTGIANRDGSPRAV
Ga0307471_10121661223300032180Hardwood Forest SoilWGKERKALDVVPVKVRERDTDLLLLVADGAKVSAQISQSSARVNDSDLIRIGDLQARRVAAELLKTGIADGNRSPRAIKLELHGIVFMKLSPNRAKNP
Ga0307472_10018138543300032205Hardwood Forest SoilRNFLPGIVSLGKERKALDVVPVKVGEPDKYLFLLVADGEKVSAQISKSRARVDNDDAVRVGERDLQAGGVAAELLKTRITNGDGSPRTVKLKPHRIPLSRR
Ga0310811_1005684413300033475SoilEQDTDLLLLVADGAKVSAQISQSRARVNDGDAVRIGDLQARRIAAELLKTGIADGDGSPRTIKLKLHRIIL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.