Metagenome / Metatranscriptome Family F101565

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101565
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	38 residues
Representative Sequence	GMEQVIALMAEGETIKPPLPAAERFVDLQYLHAAGVQ
Number of Associated Samples	85
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.90 %
% of genes near scaffold ends (potentially truncated)	94.12 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (71.569 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.569 % of family members)
Environment Ontology (ENVO)	Unclassified (22.549 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.059 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52 1JGI11643J12802_101549004 2Ga0070698_1001549281 3Ga0070698_1016803841 4Ga0070734_108073481 5Ga0066703_103273561 6Ga0066903_1004574531 7Ga0066903_1018404882 8Ga0066903_1077216683 9Ga0075026_1006617411 10Ga0070765_1006014881 11Ga0075422_105510441 12Ga0079220_118246291 13Ga0075431_1013482821 14Ga0075429_1017913522 15Ga0075436_1000971121 16Ga0075419_103005801 17Ga0099792_111441012 18Ga0075423_106173721 19Ga0105242_125328781 20Ga0126374_103693691 21Ga0126384_117603251 22Ga0126372_105268743 23Ga0126378_130893791 24Ga0126379_103894181 25Ga0126381_1024377311 26Ga0126381_1035491221 27Ga0126381_1038531101 28Ga0126381_1042479892 29Ga0136847_105614102 30Ga0126383_101452594 31Ga0126383_113844252 32Ga0126383_117137131 33Ga0134122_130820801 34Ga0137425_10107593 35Ga0137388_100136034 36Ga0137365_100318083 37Ga0150985_1175447971 38Ga0150984_1218103203 39Ga0137397_103322013 40Ga0137407_101151084 41Ga0137407_104398082 42Ga0137407_111648752 43Ga0164298_105248782 44Ga0164303_109984491 45Ga0126369_113727171 46Ga0126369_131619401 47Ga0134076_106382241 48Ga0164309_113115963 49Ga0164306_105604491 50Ga0182008_105020311 51Ga0180082_10038484 52Ga0137412_102992822 53Ga0182036_117192572 54Ga0182037_103405071 55Ga0182037_106619323 56Ga0182039_104319412 57Ga0182039_111904451 58Ga0163161_114317102 59Ga0163161_117932242 60Ga0066667_101739681 61Ga0193743_11234123 62Ga0210405_113275262 63Ga0210408_101998821 64Ga0210408_104817611 65Ga0210397_107001452 66Ga0210394_118553691 67Ga0213878_104688252 68Ga0210392_113951831 69Ga0187846_102715871 70Ga0210398_100456675 71Ga0207693_100143131 72Ga0207686_114547592 73Ga0207669_109260461 74Ga0207712_117427202 75Ga0207648_108318741 76Ga0207683_117565121 77Ga0209234_12737543 78Ga0209056_101481751 79Ga0209701_100676063 80Ga0209486_101126051 81Ga0209488_1000446012 82Ga0209526_102768101 83Ga0307302_102648293 84Ga0308198_10896561 85Ga0307497_100125784 86Ga0318573_100416422 87Ga0318496_101442982 88Ga0318500_100928152 89Ga0318500_103302962 90Ga0306918_102454231 91Ga0318554_106501261 92Ga0318498_102306272 93Ga0318566_100908512 94Ga0318566_103037831 95Ga0318567_100515121 96Ga0318517_100099613 97Ga0306919_106562831 98Ga0310916_106437422 99Ga0310910_107798671 100Ga0318518_104566862 101Ga0318519_100142153 102Ga0372943_0113994_33_143
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52 1JGI11643J12802_101549004 2Ga0070698_1001549281 3Ga0070698_1016803841 4Ga0070734_108073481 5Ga0066903_1004574531 6Ga0075026_1006617411 7Ga0075422_105510441 8Ga0079220_118246291 9Ga0075431_1013482821 10Ga0075436_1000971121 11Ga0075419_103005801 12Ga0099792_111441012 13Ga0105242_125328781 14Ga0126372_105268743 15Ga0126378_130893791 16Ga0126379_103894181 17Ga0126381_1024377311 18Ga0126381_1035491221 19Ga0126381_1042479892 20Ga0136847_105614102 21Ga0126383_101452594 22Ga0150985_1175447971 23Ga0150984_1218103203 24Ga0137407_104398082 25Ga0164303_109984491 26Ga0126369_131619401 27Ga0164309_113115963 28Ga0180082_10038484 29Ga0182036_117192572 30Ga0182039_111904451 31Ga0193743_11234123 32Ga0187846_102715871 33Ga0207712_117427202 34Ga0207683_117565121 35Ga0209488_1000446012 36Ga0209526_102768101 37Ga0307302_102648293 38Ga0306918_102454231 39Ga0318554_106501261 40Ga0310916_106437422
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36. 1Ga0075436_1000971121 2JGI11643J12802_101549004 3Ga0070698_1001549281 4Ga0070734_108073481 5Ga0066903_1077216683 6Ga0075026_1006617411 7Ga0075431_1013482821 8Ga0075429_1017913522 9Ga0075419_103005801 10Ga0099792_111441012 11Ga0075423_106173721 12Ga0126384_117603251 13Ga0126378_130893791 14Ga0126379_103894181 15Ga0126381_1024377311 16Ga0126381_1035491221 17Ga0126381_1042479892 18Ga0136847_105614102 19Ga0126383_101452594 20Ga0134122_130820801 21Ga0150985_1175447971 22Ga0137397_103322013 23Ga0137407_104398082 24Ga0137407_111648752 25Ga0164298_105248782 26Ga0164303_109984491 27Ga0126369_131619401 28Ga0164309_113115963 29Ga0164306_105604491 30Ga0182008_105020311 31Ga0180082_10038484 32Ga0182036_117192572 33Ga0182037_106619323 34Ga0163161_114317102 35Ga0066667_101739681 36Ga0193743_11234123 37Ga0210405_113275262 38Ga0210408_101998821 39Ga0210397_107001452 40Ga0210394_118553691 41Ga0210392_113951831 42Ga0187846_102715871 43Ga0210398_100456675 44Ga0207686_114547592 45Ga0207712_117427202 46Ga0207683_117565121 47Ga0209701_100676063 48Ga0209486_101126051 49Ga0209488_1000446012 50Ga0209526_102768101 51Ga0307302_102648293 52Ga0308198_10896561 53Ga0306918_102454231 54Ga0318554_106501261 55Ga0310916_106437422 56Ga0372943_0113994_33_143
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.23% β-sheet: 0.00% Coil/Unstructured: 70.77%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01568	Molydop_binding	20.59
PF09084	NMT1	7.84
PF03819	MazG	4.90
PF03401	TctC	2.94
PF03749	SfsA	2.94
PF04955	HupE_UreJ	2.94
PF01471	PG_binding_1	1.96
PF09351	DUF1993	1.96
PF00144	Beta-lactamase	0.98
PF13407	Peripla_BP_4	0.98

Showing 1 to 10 of 36 entries

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COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	7.84
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	7.84
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.94
COG2370	Hydrogenase/urease accessory protein HupE	Posttranslational modification, protein turnover, chaperones [O]	2.94
COG1489	DNA-binding protein, stimulates sugar fermentation	Signal transduction mechanisms [T]	2.94
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.96
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.98
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.98
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.57 %
Unclassified	root	N/A	28.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.57 %
Unclassified	root	N/A	28.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.57 %
Unclassified	root	N/A	28.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.96 %
Unclassified	root	N/A	28.43 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32.35 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.94 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.92 %
Unclassified	root	N/A	28.43 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.59 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %
Unclassified	root	N/A	28.43 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.98 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.96 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.98 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.90 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	6.86 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %
Unclassified	root	N/A	28.43 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.92 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.96 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.98 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.94 %
Deltaproteobacteria bacterium GWA2_57_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	0.98 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.98 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	6.86 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %
Unclassified	root	N/A	28.43 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.96 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.98 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.94 %
Deltaproteobacteria bacterium GWA2_57_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	0.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %
Unclassified	root	N/A	28.43 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.98 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	6.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.96 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.98 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.94 %
Deltaproteobacteria bacterium GWA2_57_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	0.98 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.98 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	0.98 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5.88 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %
Unclassified	root	N/A	28.43 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_10154900	Not Available	925	Open in IMG/M
3300005471\|Ga0070698_100154928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2237	Open in IMG/M
3300005471\|Ga0070698_101680384	Not Available	587	Open in IMG/M
3300005533\|Ga0070734_10807348	Not Available	533	Open in IMG/M
3300005568\|Ga0066703_10327356	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005764\|Ga0066903_100457453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2137	Open in IMG/M
3300005764\|Ga0066903_101840488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1158	Open in IMG/M
3300005764\|Ga0066903_107721668	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300006057\|Ga0075026_100661741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	620	Open in IMG/M
3300006176\|Ga0070765_100601488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1037	Open in IMG/M

Showing 1 to 10 of 102 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.33%
Host-Associated	Host-Associated	16.67%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	3.92%
Plants	Host-Associated → Plants	16.67%
Terrestrial	Environmental → Terrestrial	79.41%

Habitat	Taxonomy	Distribution
Cave	Environmental → Terrestrial → Cave	0.98%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.76%
Sediment	Environmental → Aquatic → Sediment	2.94%
Soil	Environmental → Terrestrial → Soil	78.43%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.94%
Lake	Environmental → Aquatic → Freshwater → Lake	0.98%
Loam	Environmental → Terrestrial → Soil → Loam	7.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.98%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.98%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.94%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M

Showing 1 to 10 of 85 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_101549004	3300000890	Soil	KGLNQVIRVMAEAGQLHAPLPAAERFVDLQYLRAAGLMK*
Ga0070698_1001549281	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LKGLSQVIQFMGETGDLKPPLASAERFVDLQYLRAAGLQ*
Ga0070698_1016803841	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RAVARCVIPLLPRETGDLKPPLPPAERFVDLQYLRAAGIQ*
Ga0070734_108073481	3300005533	Surface Soil	DFAGLKQVIAFMAEARLIAPPLPLPERFVDLQYLRAAAIE*
Ga0066703_103273561	3300005568	Soil	CMIPLLPRETGDLKPPLPPAERFVDLQYLRAAGIQ*
Ga0066903_1004574531	3300005764	Tropical Forest Soil	DLKGFKTAIEFMGEAGVLKAPLPPPERFVDLQYLRAAGVQ*
Ga0066903_1018404882	3300005764	Tropical Forest Soil	TAIEFMGEAEVLKAPLPPPERFVDLQYLRAAGLQ*
Ga0066903_1077216683	3300005764	Tropical Forest Soil	GFKTAIEFMGEAGVLKAPLPPPERFVDLQYLRAAGLQ*
Ga0075026_1006617411	3300006057	Watersheds	EVIALMAEAGMLKAPLPVAERFVDLQYLRAAGLQ*
Ga0070765_1006014881	3300006176	Soil	AVIALLGRTGELKAPLPAAERFVDLQYLKAAGLQ*
Ga0075422_105510441	3300006196	Populus Rhizosphere	EQVIAMMGEGGILAPPLPPADRFVDLQFLQAAGIQ*
Ga0079220_118246291	3300006806	Agricultural Soil	QAIALMGEGGILKGPLPRAERFVDLQYLQAAGVQ*
Ga0075431_1013482821	3300006847	Populus Rhizosphere	PKGLAQVIAFMADAGHLQPPLPDAERFVDLGYLARAGVR*
Ga0075429_1017913522	3300006880	Populus Rhizosphere	PKGVAQVIAFMADAGQIQPPLPHAERFVDLSYLARAGVR*
Ga0075436_1000971121	3300006914	Populus Rhizosphere	GMEQVIALMAEGETIKPPLPAAERFVDLQYLHAAGVQ*
Ga0075419_103005801	3300006969	Populus Rhizosphere	GFNRVIQIMAEAGEVKPPLPSAERFVDLQYLHAAGLMK*
Ga0099792_111441012	3300009143	Vadose Zone Soil	QVIAMLGEAGALKPPLPKPEQFVDLQYLRAGGLQ*
Ga0075423_106173721	3300009162	Populus Rhizosphere	LKGFRTAIEFLGEASVLKAPLPPVERFVDLQYLRAAGLQ*
Ga0105242_125328781	3300009176	Miscanthus Rhizosphere	VAQVIAFMADAGQIQPPLPDAERFVDLRFLARAGVAPR*
Ga0126374_103693691	3300009792	Tropical Forest Soil	AGEINIKGMEQVIAMMGEGGVLAPPLPAADRFVDLQFLQAAGIQ*
Ga0126384_117603251	3300010046	Tropical Forest Soil	LRGMEQVIAMMGEGGVLAPPLPPADRFVDLQFLQAAGIQ*
Ga0126372_105268743	3300010360	Tropical Forest Soil	AGEINIKGMEQVIAMMGEGGVLAPPLPAADRFVDLQFLQAAGSQ*
Ga0126378_130893791	3300010361	Tropical Forest Soil	VSAVIALLGRTGELTASLPAAERFVDLQYLEAAGLQ*
Ga0126379_103894181	3300010366	Tropical Forest Soil	LKGLAQAITLMGEAGTLKGPLPPAERFVDLQYLRLAGFQ*
Ga0126381_1024377311	3300010376	Tropical Forest Soil	LKQVITLMSEAGNLKPPLPAAERFVDAQYLKDAGVE*
Ga0126381_1035491221	3300010376	Tropical Forest Soil	ELNLNGLTQVSAFMGEAGTIESPLGAAGRFVDLQYLEAAGVR*
Ga0126381_1038531101	3300010376	Tropical Forest Soil	GMEQVIALMAEGETIKPPLPAAERFVDLQYLHAAEVQ*
Ga0126381_1042479892	3300010376	Tropical Forest Soil	GAPARVVAMMAQAGLLKPPLPSAQRFVDLQYLRAAGLQ*
Ga0136847_105614102	3300010391	Freshwater Sediment	GQVIQFMGEAGELKPPLPAPERFVDLQYLQAAGVY*
Ga0126383_101452594	3300010398	Tropical Forest Soil	QVVAMMAETGALSPPLPAPETFVDRQYLQAAGVN*
Ga0126383_113844252	3300010398	Tropical Forest Soil	QAIALMGEAGTLKGPLPPAERFVDLQYLRLAGFQ*
Ga0126383_117137131	3300010398	Tropical Forest Soil	TAIEFMGEAGVLKEPLPPPERFVDLQYLHAAGVQ*
Ga0134122_130820801	3300010400	Terrestrial Soil	SFAQVIAFMVEAGQLKPPLPAAERFVDLQYLEAAGVR*
Ga0137425_10107593	3300011422	Soil	QVIAFMAEAGQLKAPLPLPERFVDLQYLRLAGVR*
Ga0137388_100136034	3300012189	Vadose Zone Soil	LELVIAMMGEGGALKAPLPQAERFVDLQYLRAAGVQ*
Ga0137365_100318083	3300012201	Vadose Zone Soil	MEQVIALMGESETIKAPLPAVERFVDLQYLHAAGVQ*
Ga0150985_1175447971	3300012212	Avena Fatua Rhizosphere	ADLAQVIAFMGDGGMLAQPLPPPERFVDPQYLKAAGAE*
Ga0150984_1218103203	3300012469	Avena Fatua Rhizosphere	LAQVIAMMADAGAIKTPLPSPEQFVDLQYLRTAGVP*
Ga0137397_103322013	3300012685	Vadose Zone Soil	RAVSRCMIPLLPRETGDLKPPLPPAERFVDLQYLRAAGIQ*
Ga0137407_101151084	3300012930	Vadose Zone Soil	ATAIEFMGEAGVLKAPLPPVERFVDLQYLRAAGLQ*
Ga0137407_104398082	3300012930	Vadose Zone Soil	KALDQVIAMLGEAGALKAPLPSAERFVDLQYLRAAGVQ*
Ga0137407_111648752	3300012930	Vadose Zone Soil	GQVIQFMAEAGELKPPLPQPERFVDLQYLQAAGLQ*
Ga0164298_105248782	3300012955	Soil	GMEQAIALMGEGGILKAPLPRAERFVDLQYLQAAGVQ*
Ga0164303_109984491	3300012957	Soil	MTKVIELLGQTGELKGPLPAAERFVDLQYLEAAGMR*
Ga0126369_113727171	3300012971	Tropical Forest Soil	GEINLRGMEQVIALMAEGETIKPPLPAAERFVDLQYLHAAEVQ*
Ga0126369_131619401	3300012971	Tropical Forest Soil	QVIAMMGDAGTLGSPLPSPQQFVDLQYLHAAGIQ*
Ga0134076_106382241	3300012976	Grasslands Soil	KGLGQVIQFMGETGDLKPPLPSAERFVDLQYLRAVGIQ*
Ga0164309_113115963	3300012984	Soil	ELAGIAQVITFMAEAGQLKPPLPAPERFVDLRYQRR*
Ga0164306_105604491	3300012988	Soil	LAQVIAMMSDAGAIKTPLPSPEQFVDLQYLRRAGVP*
Ga0182008_105020311	3300014497	Rhizosphere	EQVIALMGEGGVLEPPLPPAERFVDLQFLAAAGVQ*
Ga0180082_10038484	3300014880	Soil	AQVIAFMAEAGQLKAPLPLPERFVDLQYLRLAGVR*
Ga0137412_102992822	3300015242	Vadose Zone Soil	MEQAITLMGESGVIKAPLPAAERFVDLQYLRAAGVQ*
Ga0182036_117192572	3300016270	Soil	NGLEQVIAMMAEARTLNPPLPSADRFVDLQYLRATGVQ
Ga0182037_103405071	3300016404	Soil	KLGEINLKGMEQVIALMAEGETINAPVPAAERFVDLQYLHAAGVQ
Ga0182037_106619323	3300016404	Soil	EQVIAMMAKARTLNPPLPSAERFVDLQYLRSAGVQ
Ga0182039_104319412	3300016422	Soil	LGEINLKGMEQVIALMAEGETIKPPLPAAERFVDLQYLHAAGVQ
Ga0182039_111904451	3300016422	Soil	GILPKLGEINLKGMEQVIALMAEGETIKPPLPAAERFGDLQYLHAAGVQ
Ga0163161_114317102	3300017792	Switchgrass Rhizosphere	DPKGVAQVIAFMADAGQIQPPLPDAERFVDLRFLARAGVAPR
Ga0163161_117932242	3300017792	Switchgrass Rhizosphere	AQVIAFMGEGGMLAQPLPPPERFVDPQYLKAAGAE
Ga0066667_101739681	3300018433	Grasslands Soil	DIKGLGQVIQFMGETGDLKPPLPSAERFVDLQYLRAVGIQ
Ga0193743_11234123	3300019889	Soil	FVREGIIVEMISIEAETGDLKPPLPSAERFVDLQYLRAAGIQ
Ga0210405_113275262	3300021171	Soil	AQVIAFMTDGGAIKPPLPAPEQFVDLQYLRAAGAQ
Ga0210408_101998821	3300021178	Soil	GMEQVIALMGESATIKAPLPAAERFVDLQYLHAAGVQ
Ga0210408_104817611	3300021178	Soil	NLKGMEQVIALMAEGETIKPPLPAAERFVDLQYLHAAGVQ
Ga0210397_107001452	3300021403	Soil	PKLGEISLKGMEQAIALMAEGGMIKPPLPAAEQFADLQYLRAVGVP
Ga0210394_118553691	3300021420	Soil	ELEALEQVIALMGEAGNLKAPLPSAERFVDTQYLRAAGAQ
Ga0213878_104688252	3300021444	Bulk Soil	LKGMEQVIALMAEGETIKPPLPAAERFVDLQYLHAAGVQ
Ga0210392_113951831	3300021475	Soil	VGNVIELLGRSGELKAPLPAAERFTDLQYLEAAGLQ
Ga0187846_102715871	3300021476	Biofilm	GLQQVIAMMGEEGLIGKPPPQASRFVDLQYLHAAGVQ
Ga0210398_100456675	3300021477	Soil	GQVIAFMGEGGTIKPPLPAPEQFVDLQYLRAAGAQ
Ga0207693_100143131	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RGMEQVIALMGESATIKAPLPAAERFVDLQYLHAAGVQ
Ga0207686_114547592	3300025934	Miscanthus Rhizosphere	EQVIAFMGEAGNLTPPLPAAERFVDLQYLHAAGIK
Ga0207669_109260461	3300025937	Miscanthus Rhizosphere	QVIAFMADAGQIQPPLPDAERFVDLRFLARAGVAPR
Ga0207712_117427202	3300025961	Switchgrass Rhizosphere	LKGMEQVIAFMREAGTLNEPVPTAERFTDLQYLRLAGIK
Ga0207648_108318741	3300026089	Miscanthus Rhizosphere	AQVIAFMGEGGMLPQPLPPPERFVDPQYLKAAGAE
Ga0207683_117565121	3300026121	Miscanthus Rhizosphere	MAQVIAFMAEAGTVKAPLPAPERFFDLRYLQSALPK
Ga0209234_12737543	3300026295	Grasslands Soil	MEQVIALMGESETIKAPLPAVERFVDLQYLHAAGVQ
Ga0209056_101481751	3300026538	Soil	EINLKGMEQVIALMAEGETIKPPLPAAERFVDLQYLHAAGVQ
Ga0209701_100676063	3300027862	Vadose Zone Soil	LELVIAMMGEGGALKAPLPQAERFVDLQYLRAAGVQ
Ga0209486_101126051	3300027886	Agricultural Soil	KGLAQVIAFMAEAGQIQPPLPDVERFVDLSYLARAGVR
Ga0209488_1000446012	3300027903	Vadose Zone Soil	DPKGFSAAIEFMGEAGVLKPPFPKPDQFIDLQYLQAAGIQ
Ga0209526_102768101	3300028047	Forest Soil	AGLAKVIELLAETGQIGAPPPPAERFVDLQYLQAAGLQ
Ga0307302_102648293	3300028814	Soil	QQAIALMEEGGLLAQPLPAAERFIDLQYLRAAGIQ
Ga0308198_10896561	3300030904	Soil	KGMEQAITLMGESGVIKAPLPAAERFVDLQYLRAAGVQ
Ga0307497_100125784	3300031226	Soil	AQVIAMMRDAGAIKTPLPSPEQFVDLQYLRAAGVP
Ga0318573_100416422	3300031564	Soil	INLKGMEQVIALMAEGETIKPPLPAAERFVDLQYLHAAGVQ
Ga0318496_101442982	3300031713	Soil	LNGMEQVIALMAEGETINAPLPAAERFVDLQYLHAAGVQ
Ga0318500_100928152	3300031724	Soil	INLRGMEQVIALMAEGETIKPPLPAAERFVDLQYLHAAGVQ
Ga0318500_103302962	3300031724	Soil	TGMEQVIALMGESETIKAPLPVAERFVDLQYLHAAGVQ
Ga0306918_102454231	3300031744	Soil	LAGLKEVIALMGEAGNLKPPLPSAERFVDTRYLQAAGLQ
Ga0318554_106501261	3300031765	Soil	MQQAIAMLGESGVIKPPLPGAERFVDLQYLQAAGIQ
Ga0318498_102306272	3300031778	Soil	LKEVIALMGEAGNLKPPLPSAERFVDTQYLRAAGLQ
Ga0318566_100908512	3300031779	Soil	GMEQVIALMAEGETIKPPLPAAERFVDLQYLHAAGVQ
Ga0318566_103037831	3300031779	Soil	LRGMEQVIALKAEGETIKPPLPAAERFVDLQYLHAAGVQ
Ga0318567_100515121	3300031821	Soil	GEINLKGMEQVIALMAEGETIKPPLPAAERFVDLQYLHAAGVQ
Ga0318517_100099613	3300031835	Soil	MEQVIALMGESETIKAPLPVAERFVDLQYLHAAGVQ
Ga0306919_106562831	3300031879	Soil	NGLEQVIAMMAEARTINPPLPSAERFVDLQYLRAAGVQ
Ga0310916_106437422	3300031942	Soil	GLEQVIAFMGEAGNLKPPLPPAERFVELQYLHAAGVK
Ga0310910_107798671	3300031946	Soil	LKGMEQVIALMGESETIKAPLPAAERFVDLQYLHAAGVQ
Ga0318518_104566862	3300032090	Soil	EQVIALMGESETIKAPLPVAERFVDLQYLHAAGVQ
Ga0318519_100142153	3300033290	Soil	NLKGMEQVIALMGESETIKAPLPVAERFVDLQYLHAAGVQ
Ga0372943_0113994_33_143	3300034268	Soil	LDQVIAFMGEGGALPAPLPPAARFVDLQYLRAAGVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters