NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F101516

Metagenome / Metatranscriptome Family F101516

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F101516
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 151 residues
Representative Sequence MKLRLVLVPLIVATVGVVGIQGTASSAPLTKQNFSLTSDNIEVPGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRVVGQTHGCSGPPTGSFTITARGSINLPN
Number of Associated Samples 72
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 56.86 %
% of genes near scaffold ends (potentially truncated) 49.02 %
% of genes from short scaffolds (< 2000 bps) 94.12 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (88.235 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(34.314 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(31.373 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204.206.208.210.212.214.
1Ga0062595_1007353841
2Ga0062595_1018470301
3Ga0058860_114624241
4Ga0062594_1004613421
5Ga0062594_1031861831
6Ga0066814_101133521
7Ga0065705_104561461
8Ga0070666_103984331
9Ga0070667_1006675921
10Ga0070695_1018922331
11Ga0070696_1003391502
12Ga0068860_1010905961
13Ga0075365_100394084
14Ga0075368_100211194
15Ga0075364_105238271
16Ga0075367_100346022
17Ga0074054_119172592
18Ga0075425_1009943821
19Ga0075434_1025656511
20Ga0079218_101320392
21Ga0075418_102961681
22Ga0075423_128899141
23Ga0105249_123103201
24Ga0126313_100813831
25Ga0126305_112794611
26Ga0126309_107738851
27Ga0126319_10683111
28Ga0126319_10791791
29Ga0126319_12483031
30Ga0126319_12877811
31Ga0126319_12915871
32Ga0126319_13220251
33Ga0126319_13940911
34Ga0126319_13949661
35Ga0126319_14894101
36Ga0126319_16530251
37Ga0151490_16532411
38Ga0137433_10777952
39Ga0134045_12169821
40Ga0150984_1065638822
41Ga0150984_1082339721
42Ga0164300_103094691
43Ga0164298_109969171
44Ga0164299_102963491
45Ga0164308_117148321
46Ga0132258_109371031
47Ga0132258_117963612
48Ga0184608_103550181
49Ga0184624_103835241
50Ga0190272_123213261
51Ga0190270_112788071
52Ga0190270_124530601
53Ga0180119_11121801
54Ga0184648_12014181
55Ga0184647_10256071
56Ga0193697_10096101
57Ga0193697_10470732
58Ga0193696_11083362
59Ga0193745_11234161
60Ga0206350_102493231
61Ga0210380_106073991
62Ga0222624_12071912
63Ga0222625_12500781
64Ga0222625_17093811
65Ga0207661_120496951
66Ga0207658_108141142
67Ga0209486_101591591
68Ga0247828_110802251
69Ga0247818_105787291
70Ga0307302_103504491
71Ga0307312_101538682
72Ga0247827_106264941
73Ga0102752_14549241
74Ga0308203_10577782
75Ga0308206_11220271
76Ga0308206_11443191
77Ga0308200_10414381
78Ga0308200_11644021
79Ga0308190_11878951
80Ga0308189_104083241
81Ga0308204_101208681
82Ga0308204_102424691
83Ga0308197_104143491
84Ga0308199_10781821
85Ga0308199_10881122
86Ga0308199_11302791
87Ga0308187_100485911
88Ga0308187_101130071
89Ga0308187_101314291
90Ga0308187_102959251
91Ga0308187_103572561
92Ga0308187_103958221
93Ga0308187_104011801
94Ga0308187_104588431
95Ga0308194_101213842
96Ga0364929_0168685_7_429
97Ga0364929_0248360_2_454
98Ga0364943_0219068_296_703
99Ga0364943_0428045_80_514
100Ga0364941_153445_54_512
101Ga0314780_212030_68_505
102Ga0314783_151590_2_448
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 3.33%    β-sheet: 34.44%    Coil/Unstructured: 62.22%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

20406080100120140MKLRLVLVPLIVATVGVVGIQGTASSAPLTKQNFSLTSDNIEVPGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRVVGQTHGCSGPPTGSFTITARGSINLPNSequenceα-helicesβ-strandsCoilSS Conf. scoreSignal Peptide
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
11.8%88.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Soil
Groundwater Sediment
Soil
Soil
Serpentine Soil
Grasslands Soil
Switchgrass Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Agricultural Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Sediment
Host-Associated
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Populus Endosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Avena Fatua Rhizosphere
6.9%9.8%34.3%2.9%2.9%3.9%4.9%4.9%3.9%3.9%2.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062595_10073538413300004479SoilMRLRQVLVALTIAAVGVVAMQGTASSAPVTKQNFTITADISEEGGGPVVASGAINATGEDVVISDTEDQFVFPDGNLTIIHAPVRSKEHFNDKKCTGSFRETGTYVISEGTGQYEGVTGSGSYRASGRLQGGCEGPPTGTFTITARGSINLPNP*
Ga0062595_10184703013300004479SoilAPVTKQNFTLTSDISEEGGGTVVASGAINATGEDVVISDTEDQFIFPDGNLTVIHAPVRGKDHFNDKKCTGNFRETGTYVISEGTGQYEGVTGSGTYRVVGRIQGGCEGIPTGTVTITARGSVNLPNP*
Ga0058860_1146242413300004801Host-AssociatedMRLRHLLVVLTIATTGAIGFQGTASSAPLTKQNFTLTSDDINTPGGTVVATGAINATGQDVVISDTEDQFVFPDGTLTIIHAPVRTHDHFNEKKCSGTFRESGTYVISAGTDQYEGVTGSGNYRVVGTVEGGCNGPDTGTLTITARGSINLPDA*
Ga0062594_10046134213300005093SoilMRLRHVLVALAITATGAVGFQGAAFSAPVTKQDFSLTADITQEGGTVVASGAINATGQDVVISDTEDQFVFPDGTLTIFHAPVRSRDRFNDKTCTGKIRETGTYVISAGTDQYEGASGSGSYRVVGRIQNGCEGTPTGTFTITARGSINLP
Ga0062594_10318618313300005093SoilMKLRLVLVPLIVATVGVVGIQGTASSAPLTKQNFSLTSDNIEVPGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRVVGQTHGCSGPPTGSFTITARGSINLPN
Ga0066814_1011335213300005162SoilTKQNFTLTSDNIEVPGGTVVASGAINAAGEDLVISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRLVGQTHGCSGPPTGSLTITARGSINLPNA*
Ga0065705_1045614613300005294Switchgrass RhizosphereMRLRHVLVALAITATGAVGFQGAAFSAPVTKQDFSLTADITQEGGTVVASGAINATGQDVVISDTEDQFVFPDGTLTIFHAPVRSRDRFNDKTCTGKIRETGTYVISAGTDQYEGASGSGSYRVVGRIQNGCEGTPTGTFTITAR
Ga0070666_1039843313300005335Switchgrass RhizosphereMRLRHLFVSLVMTGVGVAGVHGSASSAPLTKQNFTLAAPLTEEGGGPVVASGAINATGQDIVISDTEDQFVFPDGTLTINHAPVRGKDHFNDKKCTGSFRETGTYVISEGAGLYEGVSGSGRYRVVARFENGCDAFPVGTLTIMARGSINLPDA*
Ga0070667_10066759213300005367Switchgrass RhizosphereMTGVGVAGVHGSASSAPLTKQNFTLAAPLTEEGGGPVVASGAINATGQDIVISDTEDQFVFPDGTLTINHAPVRGKDHFNDKKCTGSFRETGTYVISEGTGLYEGVSGSGRYRVVARFENGCDAFPVGTLTIMARGSINLPDA*
Ga0070695_10189223313300005545Corn, Switchgrass And Miscanthus RhizosphereMKLRLVLVPLIVATVGVVGIQGTASSAPLTKQNFSLTSDNIEVPGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRLVGKTHGCSGPPTGS
Ga0070696_10033915023300005546Corn, Switchgrass And Miscanthus RhizosphereMKLRRVVIPFAIAATSVVGIHSTASSAPLTKQNFTLTSDISEEGGGTVFATGAINATGEDVVITDTEDLFVFPDGTLTVIHAPVRSNDHFNDKKCSGSFSETGTYVISEGTGQYEGVTGSGTYRVHARVEDVCTETPVGTFTITARGSVNLP*
Ga0068860_10109059613300005843Switchgrass RhizosphereMRLRHLFVSLVMTGVGVAGVHGSASSAPLTKQNFTLAAPLTEEGGGPVVASGAINATGQDIVISDTEDQFVFPDGTLTINHAPVRGKDHFNDKKCTGSFRETGTYVISEGTGLYEGVSGSGRYRVVARFENGCDAFPVGTLTIMARGSINLPDA*
Ga0075365_1003940843300006038Populus EndosphereMRLRHVFVSLVMAAAGVGVIQESASSAPLTKQNFSLTADITEEGGGTVVASGAINATGQDVVISDTEDHFVFPNGTLTIMHAPVRSAEHFNDKKCTGSFKETGTYVISAGTGQYEGVSGSGRYRVVGRFENGCSEFPTGTFTITARGSINLPES*
Ga0075368_1002111943300006042Populus EndosphereMRLRHVFVSLVMAAAGVGVIQESASSAPLTKQNFSVTADFTEEGGGTVVASGAINATGQDVVISDTEDHFVFPNGTLTIMHAPVRSAEHFNDKKCTGSFKETGTYVISAGTGQYEGVSGSGRYRVVGRFENGCSEFPTGTFTITARGSINLPES*
Ga0075364_1052382713300006051Populus EndosphereMRLRHLLVVLTVAAVGVVGFQGTASPAPLTKQGFTLTTDDINTPGGTVVATGAINATGEDVVISDTEDQFVFPDGTLTIIHAPVRTHDHFSDKKCSGTFRETGTYVISAGTDQYEGVTGSGTYRVVGSIDDG
Ga0075367_1003460223300006178Populus EndosphereMRLRHVFVSLVMAAAGVGVIQESASSAPLTKQNFSVTADITEEGGGTVVASGAINATGQDVVISDTEDHFVFPNGTLTIMHAPVRSAEHFNDKKCTGSFKETGTYVISAGTGQYEGVSGSGRYRVVGRFENGCSEFPTGTFTITARGSINLPES*
Ga0074054_1191725923300006579SoilMKLRLVLVPLIVATVGVVGIQGTASSAPLTKQNFTLTSDNIEVPGGTVVASGAINAIGEDVFISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRLVGQTHGCSGPPTGSLTITARGSINLPNP*
Ga0075425_10099438213300006854Populus RhizosphereMRLRHTLVALAVATFSVVGMSAVASAAPLTKQSFTLTQDINGVGGTVVASGAINATGQDVVVSDTEDQFVFPDGTLTVIHVPVRSKDHFNDRKCTGKFRETGTYIISAGTDAYAGITGSGDYTAVGSIANGCVGTPTGSVTITASGPINLPTS*
Ga0075434_10256565113300006871Populus RhizosphereTGAVGFQGAAFSAPVTKQDFSLTADITQEGGTVVASGAINATGQDVVISDTEDQFVFPDGTLTIFHAPVRSRDRFNDKTCTGKIRETGTYVISAGTDQYEGASGSGSYRVVGRIQNGCEGTPTGTFTITARGSINLPS*
Ga0079218_1013203923300007004Agricultural SoilMKLRHVLVPLAITAAGVTGIQGTASSAPLAKQYFTMTANINDESGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVIHAPVRGKEHFNDNQCSATFRQTGTFVISEGTGQYEGVTGSGTYRFEARLQDGCSDPPIGSFTISARGSVNLPSASTSRLRGAGDAK*
Ga0075418_1029616813300009100Populus RhizosphereMRLRHLLVVLTVAAVGVVGFQGTASPAPLTKQGFTLTTDDINTPGGTVVATGAINATGEDVVISDTEDQFVFPDGTLTIIHAPVRTHDHFSDKKCSGTFRETGTYVISAGTDQYEGVTGSGTYRVVGSIDDGCTDPPIGTL
Ga0075423_1288991413300009162Populus RhizosphereAFSAPVTKQDFSLTADITQEGGTVVASGAINATGQDVVISDTEDQFVFPDGTLTIFHAPVRSRDRFNDKKCTGKFQETGTYVISAGTDQYEGASGSGSYRVVGRIQNGCEGTPTGTFTITARGSINLPS*
Ga0105249_1231032013300009553Switchgrass RhizosphereQGTASSAPLTKQNFSLTSDNIEVPGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRVVGRTHGCSGPPTGSFTITARGSINLPNA*
Ga0126313_1008138313300009840Serpentine SoilMKLRLVLVPLIVATVGVVGIQGTASSAPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDRFVFPDGTLTIVHARVRGKEDFNPNTCTGTFREAGNYVISEGTGQYEGVTGSGTYRLVGQTHGCSGPPTGSLTITARGSINLPNA*
Ga0126305_1127946113300010036Serpentine SoilGTASSAPLMKQEFTLTADISEEEGGTVVASGAINATGDDVVISDTEDRFVFPDGTLTVIHAPVRGKEHFNDKHCSGSFRETGTYVISQGTGQYEGVTGSGTYRVDARIQDGCSEPPIGSFTITARGSVNVPSS*
Ga0126309_1077388513300010039Serpentine SoilMFLASLAVAVVGLVGLQGPASSAPVTKQAFTLTADITEEGGGPVVASGAINATGEDVVISDTEDQFIFPGGTLTVVHAPVRSKEHFNEKKCTGSFRETGTYVISEGTGQYEGVTGSGKYRAAGHFEDACEGIPTGTFTITARGSINLPNS*
Ga0126319_106831113300010147SoilPKEWFMRIRHLLVALTVAAVAVVGIQGTAFSAPLTKQDFTLTSDISEEGGGPVVASGAINATGEDVVISDTEDLFVFPDGTLTVIHAPVRGKEHFNDKKCTGSFRETGTYVISEGTGLYEGVTGSGDYRAVGRFENGCEDIPVGTFTITAHGSINLPTA*
Ga0126319_107917913300010147SoilVLAPLMLAVVSVVGVQGTASAAPLVKQNFTLTSTDPEAPGGTVVASGAINAVGEDVVISDTEDQFVFPDGTLTIIHAPVRSKDHFNDKTCTSSFKERGTYVISGGTDQYEGVTGSGTYRLAGRLQSDCVSAPTGSFTITARGSINLPNS*
Ga0126319_124830313300010147SoilNQGVVMRLRQVLVALTVAAVGVVVLPGTASSAPVTKQNFTLTADINQEGGGPVVASGAINATGEDVVISDTQDQFIFPDGTLTVIHAPVRAKDHFNDKQCTGSFRETGTYVISEGTDQYEGITGSGTYQAVGRFQGGCEGPPTGTLTITARGSINLLNP*
Ga0126319_128778113300010147SoilMRLRHLFVVLTVAAVGVVGIQGTASSAPLTKQDFTLTSDINTPGGTVVATGAINATGEDVVISDTEDQFVFPDGTLTVIHAPVRTHDHFNDKKCSGSFRETGTYVISAGTGQYEGVTGSGDYQAVGSFEGGCTGGPESGTVTITARGSINLANA*
Ga0126319_129158713300010147SoilTLTTKPQGGIMRLLRVLAPLMLAVVSVVGLEGTASAAPLVKQNFTLTSTDPETPGGTVVASGAINAVGEDVVISDTEDQFVFPDGTLTIIHVPVRDKEHFNENTCASSFKERGTYVISAGTDQYEGVTGSGTYRVSGRFQSDCVSAPTGSFTITARGSINLPNP*
Ga0126319_132202513300010147SoilGRIRFADPDHTIQGVIMRLLRVLVPLMLVVVGVVGLQGTASAAPLVKQNFTLTSTDPDEPGGTVVASGAINAVGEDVVISDTEDQFVFPDGTLTIIHVPVRVKEHFNDNTCTASFKESGTYVISAGTGLYEGVTGSGTYRVAGRFQSDCVSAPTGSFTITARGSINLPNS*
Ga0126319_139409113300010147SoilMRLLRVLVPLMLVVVGLVGLQGTASAAPLVKQNFTLTSTNPDVPGGTVVASGAINAVGEDVVISDTEDQFVFPDGTLTVIHVPVRDKQHFNPNTCASSFKESGTYVISEGTGLYGGVTGSGTYRVAGRFQSDCVSAPTGSFTITARGSINLP*
Ga0126319_139496613300010147SoilMRLRHVIASLAVATLGIVSVQGSASSAPVTKQNFTLTADISDEGGGTVVASGAINATGEDVVISDTEDQFVFPNGTLTVIHAPVRSKDHTNDKKCTGSFRETGTYVISEGTAQYEGVTGSGTYRVAGRFQGGCEGTPTGTFTITARGSINLSNS*
Ga0126319_148941013300010147SoilMRLRHVLIALLLAAIGVVGLDGTASSAPLVKQNFTLTSDNPNEPGGTVVASGAINAVGEDVVISDTEDQFVFPDGTLTIIHAPVRSKDHFNDKTCKSSFKETGTYVISEGTGQYEGVTGSGSYRVAGRFQSDCVSEPTGSFTITARGSINLPNS*
Ga0126319_165302513300010147SoilMRLLRVLAPLTLAAVSVVGLEGTASSAPLVKQNFTLTSDNPEEPGGTIVASGAINAVGEDVFISDTEDQFVFPDGTLTIIHAPVRVNEHFNEHTCTGFVQEAGTYVISEGTDQYEGVTGGGSYRAAGRFQSDCQSEPTGSFTVTARGSINLPDA*
Ga0151490_165324113300011107SoilMKLRLVLVPLIVATVGVVGIQGTASSAPLTKQNFTLTSDNIEVPGGTVVASGAINAAGEDLVISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRLVGQTHGCSGPPTGSLTITARGSINLPNA*
Ga0137433_107779523300011440SoilMKLRLVLVPLIVATVAVLGIPGTASSAPLTKQNFTLTSNNIEGPGGGTVVASGAINATGEDVVISDTQDLFVFPDGTLTVIHAPVHGKEHFNDKNCSGSFRETGDYVISEGTGQYEGVTGSGTYRVVARFQSDCEGPPTGTFTITAQGSINLPQP*
Ga0134045_121698213300012409Grasslands SoilAVARIRSPDKNQGVVMRLRQVLVALTVAAVGAVALQGTASSAPVTKQNFTLTSDINEEGGGPVVASGAINATGEDVVISDTEDRFIFPDGTLTVIHAPVRGKEHFNDKKCTGSFHETGTYVISEGTGQYEGVTGSGTYRAAGRFHDGCQQVPTGTFTITARGSINLPTP*
Ga0150984_10656388223300012469Avena Fatua RhizosphereMQGTASSAPVTKQDFTIVSDVSEEGGGTVVASGAINATGEDVIISDTEDQFVFPGGTLTVMHAPVRAKEHFNDKKCTGSFREAGTYVISEGTGEYEGVTGSGDYRVVGLIEGGCQGVETGTVTITARGSVNLPDA*
Ga0150984_10823397213300012469Avena Fatua RhizosphereDLAHTWDRDKEGGMRLRHVLVAPVIAAVAAVGFQGAASSAPLTKQNFIITEDITGEGGTVVASGAINATGEDVIISENEDQFVFPDGTLTVVHAPVRGNEHFNPKKCTDNFREMGTYVISAGTGEYEGVTGSGDYRAVGHIEDACEAGTGTVTVNARGSINLPD*
Ga0164300_1030946913300012951SoilMKLRLVLVPLIVATVGVVGIPGTASSAPLTKQNFTLTSDNIEVPGGTVVASGAINAIGDDVVISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGAAEYEGVTGSGTYRLVGQTHGCSGPPTGSLTITARGSINLPNP*
Ga0164298_1099691713300012955SoilMKLRLVLVPLIVATVGVVGIQGTASSAPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDQFVFPDGTLTIIHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQSEGVTGSGTYRLVGQTHGCSGPPTGSLTITARGSINLPNA*
Ga0164299_1029634913300012958SoilMKLRLVLVPLIVATVGVVGIQGTASSTPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDQFVFPDGTLPIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRLVGQTHGCSGPPTGSLTITARGSINLPNA*
Ga0164308_1171483213300012985SoilLIVATVGVVGIQGTASSAPLTKQNFTLTSDNIEVPGGTVVASGAINAIGEDVVISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGAGEYEGVTGSGTYRLVGQTHGCSGPPTGSLTITARGSINLPNA*
Ga0132258_1093710313300015371Arabidopsis RhizosphereMRLRHVLVTLAIATFSVAGVSQAASSEPLTKQNFLLTTDINNEGGTVVASGAINATGDDVVISDTEDQFVFPDGTLTIIHAPVRTKDRFNDKKCTGSFRETGTYIISEGTDAYAGVTGSGDYRVVGQFTNGCVGTPIGTVTITARGSINIPEA*
Ga0132258_1179636123300015371Arabidopsis RhizosphereMRLRHLFVVLMIATTGVIGFQGTASSAPLTKQNFTLTSDDINTPGGTVVATGAINATGQDVVISDTEDQFVFPDGTLTIIHAPVRTHDHFNEKKCSGTFRESGTYVISAGTDQYEGVTGSGNYRVVGTVEGGCNGPDTGTLTITARGSINLPDA*
Ga0184608_1035501813300018028Groundwater SedimentMRLRHVLVALTVAAVGVVGMQGTASSAPVTKQNFTLTADISEEGGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVIHAPVRGNDHVNDKQCSGSFREAGTYVISEGTGQYEGVTGSGTYQVHARIQDFCTEPPIGTFTITARGSVNLP
Ga0184624_1038352413300018073Groundwater SedimentKLRLVLVPLIVATVGVVGIQGTASSAPLTKQNSTLTSDNIEVPGGTVVASGAINATGDDVAISDTVDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRLVGQTHGCSGPPTGSLTITARGSINLPNA
Ga0190272_1232132613300018429SoilRLRHVLVALTVAAVGVVGMQGTASSAPVTKQNFTLTADITEEGGGPVVASGAINATGEDVVISDTEDQFVFPDGTLTVIHALVRGKEHFNDKKCTGSFRETGTYVISEGTGLYEGVTGSGRYRAVGRFQDGCQEVPTGTFTITARGSINLPNP
Ga0190270_1127880713300018469SoilLAPLAVAAVGVVGIQGTASSAPPTRQNFTLTSDISEEGGTVVASGAINATGEDVVISDTEDLFVFPDGTLTVFHAPERTHEHFNEKKCTATFRETGTYVIAEGTDDYEGVTGSGTYRVVGQLEDACGETPTGTFTITARGTINVPNP
Ga0190270_1245306013300018469SoilMKLRLVLVPLIVATVGVVGIQGTASSAPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRLVGHTHGCSGPPTGSLTITARGSINLPNA
Ga0180119_111218013300019228Groundwater SedimentMTRRMIMKLRRVLVPLAVAAMGVVGVQHPTSAAPLTKQNFTLTSNNIEGPGGGTVVASGAINATGEDVVISDTQDLFVFPDGTLTVIHAPVHGKEHFNDKNCSGSFRETGDYVISEGTGQYEGVTGSGTYRVVARFQSDCEGPPTGTFTITAQGSINLPQP
Ga0184648_120141813300019249Groundwater SedimentMKLRLVLVPLIVATVGVVGIQGTASSTPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGIYWLVGQTHGCSGPPTGSLTITARGSINLPNA
Ga0184647_102560713300019263Groundwater SedimentMKLRLVLVPLIVATVGVVGIQGTASSAPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDQFVLPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRLVGQTHGCSGPPTGSFTITARGSINLPNA
Ga0193697_100961013300020005SoilMNLRRVLVPVAVAATGLIGIQGTASSAPLTKQNFTLTADINEEGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTIIHAPVRGKDHFNDKKCSGMFRERGTYVISEGTGQYEGVTGRGTYRVVARFHGDCQGPPIGTVTITARGSINLPIE
Ga0193697_104707323300020005SoilVNLRGVLVPVAVAAIGVVGVQGTASSAPLTKQNFTLTADINEEGGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVIHAPVRGKDHFNEKKCSGMFRERGTYVISEGTGQYEGVTGSGTYRVVGRFHGDCEGPPIGTFTITARGSINLPNE
Ga0193696_110833623300020016SoilSSAPLTKQNFTLTADINEEGGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVIHAPVRGKDHFNEKKCSGMFRERGTYVISEGTGQYEGVTGSGTYRVVGRFHGDCEGPPIGTFTITARGSINLPNE
Ga0193745_112341613300020059SoilMQLSRVVIPLAVAAASVVGIQGTASSAPLTKQDFTLTSDISEESGGTVVASGAINATGEDVVINDTEDQFVFPDGTLTVIHALVRGNDHFNDKKCSGSFSETGTFVISEGTGQYEGVTGSGTYRLQARVQDLCTETPSGTFTITARGSVNLP
Ga0206350_1024932313300020080Corn, Switchgrass And Miscanthus RhizosphereMRLRHLLVVLTIATTGAIGFQGTASSAPLTKQSFTLTSDDINTPGGTVVATGAINATGQDVVISDTEDQFVFPDGTLTIIHAPVRAQDHFNEKKCSGTFRESGTYVISAGTDQYEGVTGSGNYRVVGTVEGGCNGPDTGTLTITARGSINLPDA
Ga0210380_1060739913300021082Groundwater SedimentVATVGVVGTKGTASLAPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFREAGDYVINQGTGQYEGVTGSGTYRLVGQTHGCSGPPTGSFTITARGSINLPNA
Ga0222624_120719123300021951Groundwater SedimentMKLRLVLVPLVVATVGVVGIQGAASSAPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRIVGQTDGCSGPPTGSFTITARGSINLPNA
Ga0222625_125007813300022195Groundwater SedimentMKLRLVLVPLIVATVGVVGIQVTPSSAPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRIVGQTHGCSGPPTGSFTITARG
Ga0222625_170938113300022195Groundwater SedimentPDKNQGVVMRLRHFLVVLTVAAVGVLGLQGAASSAPVTKQAFKLTADISEEGGGPVVASGAINATGEDVVISDTEDQFVFPDGTLTIIHAPVRGKDHFNDKKCTGSFREHGTYVISEGTGQYEGVTGSGKYRVVGRFQNGCQEIPDGTFTITARGSINLPNP
Ga0207661_1204969513300025944Corn RhizosphereMRLRHLLVVLTIATTGAIGFQGTASSAPLTKQNFTLTSDDINTPGGTVVATGAINATGQDVVISDTEDQFVFPDGTLTIIHAPVRTHDHFNEKKCSGTFRESGTYVISAGTDQYEGVTGSGNYRVVGTVEGGCNGPDTGTLTITARGSINLPDA
Ga0207658_1081411423300025986Switchgrass RhizosphereMRLRHLFVSLVMTGVGVAGVHGSASSAPLTKQNFTLAAPLTEEGGGPVVASGAINATGQDIVISDTEDQFVFPDGTLTINHAPVRGKDHFNDKKCTGSFRETGTYVISEGTGLYEGVSGSGRYRVVARFENGCDAFPVGTLTIMARGSINLPDA
Ga0209486_1015915913300027886Agricultural SoilMKLRHVLVPLAITAAGVTGIQGTASSAPLAKQYFTMTANINDESGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVIHAPVRGKEHFNDNQCSATFRQTGTFVISEGTGQYEGVTGSGTYRFEARLQDGCSDPPIGSFTISARGSVNLPSASTSRLRGAGDAK
Ga0247828_1108022513300028587SoilMRCAPPLLSLVSTHIAPPWVTTLSRSGRLTALGLVGLREDNGGIMKLRLVLVPLVVATVGVVGIQGTASSAPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAVSDTEDQFVFPDGTLTVVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRVVGQ
Ga0247818_1057872913300028589SoilMKLRLVLVPLIVATVGVVGIQGTASSAPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAVSDTEDQFVFPDGTLTVVHARVRGKEDFNPNTCTGTFRETGDYVISKGTGQYEGVTGSGTYRIVGQTHGCSGPPTGSFTITARGSINLPNA
Ga0307302_1035044913300028814SoilMQLSRVVIPLAVAAASVVGIQGTASSAPLTKQNFTLTSDISEEGGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVIHAPVRGNDHVNDKQCSGSFREAGTYVISEGTGQYEGVTGSGTYQVHARIQDFCTEPPIGTFTITARGSVNLP
Ga0307312_1015386823300028828SoilMQLSRVVIPLAVAAASVVGIQGTASSAPLTKQNFTLTSDISEEGGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVIHAPVRGNDHFNDKKCSGSFREAGTYVISEGTGQYEGVTGSGTYQVHARIQDFCTEPPIGTFTITARGSVNLP
Ga0247827_1062649413300028889SoilMKLRLVLVPLIVATVGVVGIQGTASSAPLTKQNFSLTSDNIEVPGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVVHARVRGKEDFNPNTCTGTFRETGDYVISKGTGQYEGVTGSGTYRVVGQTHGCSGPPTGSFTITARGSINLPNP
Ga0102752_145492413300030783SoilGVVGIQGAASSAPVTKQNFSLTAPISDEGGGPVVASGAINATGDDVVISDTEDHFVFPEGTLTVIHAPVRSKDHFNEKKCTGSFRETGTYVIREGTGQYEGVTGSGKYRAFGRFEDACEGVPTGTFTIRARGSINLPN
Ga0308203_105777823300030829SoilMRLRHFLVPLVVAAVGMVGIQGAASAAPVTKQNFSLTNDISQEGGTVVASGAINATGEDIVISDTEDQFVFPDGTLTIIHAPVRSKDHFNDKKCTGRFHEAGTYVISAGTDQYEGVTGSGSYRVVGSIQNGCQDTPTGTFTIRARGSINLPS
Ga0308206_112202713300030903SoilMRLRHLFVVLTVAAVGVVGFQGTASSAPLTKQNFTLTTSDINTPGGTVVATGAINATGEDIVLSDTVDQFVFPDGTLTVIHAPVRANEHFNDKKCTGRFRETGTYVISAGTGLYEGVTGSGDYRAVGSIEDGCTGPGTGTLTITARGSINLPDA
Ga0308206_114431913300030903SoilQGVVMRLRHVLASLVIAAVGVVGIQGAASSAPVTKQNFTLTADISEEGGGPVVASGAINATGEDVVISDTEDRFVFPEGTLTVIHAPVRGKDHFNEKKCTGSFRETGTYVISEGTGQYEGVTGSGKYRASGRFEDGCEGVPTGTFTIRARGSINLPN
Ga0308200_104143813300030905SoilMKLRHILVPLAITAAGVTGIQGTASSAPLTKQNFTLTSDNPEEPGGTVVASGAINAVGEDVAISDTEDQFVFPDGTLTIVHATVREHGHFNEHTCASSFKETGTYVISRGTDQYEGVTGSGTYRVAGRFESDCVSEPTGSFTIEAKGSINLAST
Ga0308200_116440213300030905SoilMKLRLVLVPLIVATVGVVGIQGTASSTPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRIVGQTHGCSGPPTGSFTITARGSINLP
Ga0308190_118789513300030993SoilMKLRLVLVPLIVATVGVVGIQGTASSTPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRIVGQTHGCSGPPTGSFTITARGSINLPNA
Ga0308189_1040832413300031058SoilMRLRHVLVPLAVAAVGVLGIQGTASSAPVTKQNFTLTSDITEEGGGTVVASGAINATGEDIVISDTEDQFVFPDGTLTIIHAPVRGKDHFNDKKCTGTFRETGTYVINEGTGQYEGVTGSGSYRVVGRFHDGCEGIPIGTVTITARGSINLPAA
Ga0308204_1012086813300031092SoilMNLRGVLVPVAVAAIGVVGVQGTASSAPLTKQNFTLTADINEEGGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVIHAPVRGKDHFNEKKCSGMFRERGTYVISEGTGQYEGVTGSGTYRVVGRFHGDCEGPPIGTFTITARGSINLP
Ga0308204_1024246913300031092SoilVMRLRHLFVVLTVAAVGVVGFQGTASSAPLTKQNFTLTTSDINTPGGTVVATGAINATGEDIVLSDTVDQFVFPDGTLTVIHAPVRANEHFNDKKCTGRFRETGTYVISAGTGLYEGVTGSGDYRAVGSIEDGCTGPGTGTLTITARGSINLPTL
Ga0308197_1041434913300031093SoilMKLRLVLVPLIVATVGVVGIQGTASSTPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRIVGQTHGCSGPPTGSFTITARGSINLPN
Ga0308199_107818213300031094SoilARSPPHRSAETEFTPTETWRPIRETKTGDNMKLRHVLVPLAITAAGVTGIQSTASSAPLVKQNFTLISDNPEEPGGTVVASGAINAVGEDVAISDTEDQFVFPDGTLTIVHATVREHGHFNEHTCASSFKETGTYVISRGTDQYEGVTGSGTYRVAGRFESDCVSEPTGSFTIEAKGSINLAST
Ga0308199_108811223300031094SoilMRLRHFLVPLVVAAVGVVGIQGAASAAPVTKQNFSLTSDDINQEGGTVVASGAINATGDDIVISDTEDQFVFPDGTLTIIHAPVRSKDHFNVKKCTGKFHEAGTYVISAGTDQYEGVTGSGRYRVVGSIQNGCQDTPTGSFTIRARGSINLPS
Ga0308199_113027913300031094SoilLTALGKVELREDNGGIKKLRLVHVPQIVATVGVVGIQGTASSTPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGTYRLVGQTHGCSGPPTGSLTITARGSINLPNA
Ga0308187_1004859113300031114SoilMKLRHVLVPLAITAAGVTGIQSTASSAPLVKQNFTLISDNPEEPGGTVVASGAINAVGEDVVISDTEDQFVFPDGTLMIVHAPVRGHEHFNEHTCTSSFKEAGTYVISGGTDQYEGVTGSGSYRVAGRFQSDCVSEPTGSFTIEAKGSINLPDA
Ga0308187_1011300713300031114SoilMNLRGVLVPVAVAAIGVVGVQGTASSAPLTKQDFTLTSDISEESGGTVVASGAINATGEDVVLSDTEDQFVFPDGTLTVIHAPVRGNDHFNDKKCSGSFSETGTYVISDGTGQYEGVTGSGTYRVQARIQDSCTETPSGTFTITARGSVNLP
Ga0308187_1013142913300031114SoilMQLSRVVIPLAVAAASVVGIHSTASSAPLTKQHFTLTSDFSEEGGGTVVATGAINATGEDVVISDTEDLFVFPDGTLTVIHAPVRSNDHFNEKKCSSSFSETGTYVISEGTGEYEGVTGSGTYRVDARVQDFCTEPPVGTFTITARGSVNLP
Ga0308187_1029592513300031114SoilMKLRHVLVPLAITAAGVTGIQGTASSAPLTKHNFTLTSDNPEEPGGTVVASGAINAVGEDVAISDTEDQFVFPDGTLTIVHATVREHGHFNEHTCASSFKETGTYVISRGTDQYEGVTGSGTYRVAGRFESDCVSEPTGSFTIEAKGSINLAST
Ga0308187_1035725613300031114SoilMRLRHVIVSLAVAAVGVVSIQGSASSAPLTKQNFTLTADIITEGGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTIIHAPVRAKDHFNDKKCTGSFRETGTYVISEGTGQYEGVTGSGKYRVVGRFENGCQEIPDGTFTITARGSINLPNE
Ga0308187_1039582213300031114SoilMKLRLVLVPLIVATVGVVGIQGTASSAPLVKQNFTLTSDNPEEPGGTVVASGAINAVGEDVVISDTEDQFVFPDGTLTIIHARVRGTEHFNVHTCAGFVKETGTYVISEGTDQYEGVTGSGTYRLAGRFQSDCESEPTGSITITARGSINLPN
Ga0308187_1040118013300031114SoilMRLRHVLVPLAVAAVGVLGIQGTASSAPVTKQNFTLTSDITEEGGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVIHAPVRGKDHFNDKKCTGTFRETGTYVINEGTGQYEGVTGSGSYRVVGRFHDGGEGIPIGTVTITARGSINLPA
Ga0308187_1045884313300031114SoilMQLRRIVIPLAVAAASVVGIQGTASSAPLTKQDFTLTSDISEEGGGTVVASGAINATGEDVVISDTEDLFVFPDGTLTIIHARVRSNDHFNEKKCSSSFSESGTYVISEGTGQYEGVTGSGTYRVQARVEDFCTDPPIGTF
Ga0308194_1012138423300031421SoilMQLSRVVIPLAVVAASVVGIQGTASSAPLTKQDFTLTSDISEEGGGTVVASGAINATGEDVVISDTEDQFVFPDGTLTVIHAPVRGNDHVNDKQCSGSFREAGTYVISEGTGQYEGVTGSGTYQVHARIQDFCTEPPIGTFTITARGSVNLP
Ga0364929_0168685_7_4293300034149SedimentVGVVGVQDPASAAPLTRQNFTLTADISDEGGGTVIASGAINATGEDVVISDTEDLFVFPDGTLTVIHALVRGKEHFNDKNCSGSFRETGVYVISEGTGQYEGVTGSGTYRVVARFQGDCEGPPTGTFTITARGSINLPQP
Ga0364929_0248360_2_4543300034149SedimentVLPILTTTDKEWIMRLLRVLVPLTLAAVSVVGPEGTASSAPLVKQSFTLTSDNPEEPGGTVVASGAINAVGEDVVISDTEDQFVFPDGTLTIIHAPVRGKEHFNVNNCTGSFKESGTYVISEGTDQYEGVTGSGTYRVAGRFQSDCVNEPT
Ga0364943_0219068_296_7033300034354SedimentMKLRHVLVSLAITAAGITGIQGTASSAPLTKQDFTLTADISEEEGGTVVASGAINATGDDIVISDTEDQFVFPDGTLTVIHAPVRGKEHFNDKHCSGSFRETGTYVISQGTGQYEGITGSGTYRVDARFQSDCVSE
Ga0364943_0428045_80_5143300034354SedimentLIVATVGVVGIQGTASSAPLTKQNFTLTSDNIEVPGGTVVASGAINATGEDVAISDTEDQFVFPDGTLTIVHARVRGKEDFNPNTCTGTFRETGDYVISEGTGQYEGVTGSGSYRLIGQTHGCSGPPTGSLTITARGSINLPNA
Ga0364941_153445_54_5123300034417SedimentMELRRALVPLAVAAAGVVGIPGTASSAPLTKQSFALTSDISEEGGGTVVASGAINATGEDVVISDAEDLFVFADGTLTVIHAPVRGTEHFNDKKCSGTVHETGTYVISEGTGQYEGITGSGTYRVDVTLQDGCTEPPVGTVTITARGSVNMP
Ga0314780_212030_68_5053300034659SoilLTIATTGAIGFQGTASSAPLTKQNFTLTSDDINTPGGTVVATGAINATGQDVVISDTEDQFVFPDGTLTIIHAPVRTHDHFNEKKCSGTFRESGTYVISAGTDQYEGVTGSGNYRVVGTVEGGCNGPDTGTLTITARGSINLPDA
Ga0314783_151590_2_4483300034662SoilLVVLTIATTGAIGFQGTASSAPLTKQNFTLTSDDINTPGGTVVATGAINATGQDVVISDTEDQFVFPDGTLTIIHAPVRTHDHFNEKKCSGTFRESGTYVISEGTGQYEGVTGSGNYRVVGTVEGGCNGPDTGTLTITARGSINLPDA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.